Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene003226.t1 | XP_003594454.1 | 86.4 | 280 | 36 | 1 | 3 | 280 | 40 | 319 | 3.70E-126 | 461.1 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene003226.t1 | O81851 | 46.0 | 250 | 123 | 4 | 37 | 280 | 60 | 303 | 6.0e-48 | 192.6 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene003226.t1 | G7IFV4 | 86.4 | 280 | 36 | 1 | 3 | 280 | 40 | 319 | 2.7e-126 | 461.1 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene003226 | MS.gene02027 | PPI |
MS.gene003226 | MS.gene02785 | PPI |
MS.gene003226 | MS.gene74604 | PPI |
MS.gene003226 | MS.gene56438 | PPI |
MS.gene02027 | MS.gene003226 | PPI |
MS.gene003226 | MS.gene067574 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene003226.t1 | MTR_2g028830 | 97.518 | 282 | 5 | 1 | 1 | 280 | 38 | 319 | 0.0 | 573 |
MS.gene003226.t1 | MTR_4g083540 | 52.482 | 282 | 118 | 8 | 2 | 280 | 25 | 293 | 1.37e-92 | 276 |
MS.gene003226.t1 | MTR_2g069350 | 42.462 | 325 | 130 | 13 | 13 | 280 | 42 | 366 | 6.21e-68 | 215 |
MS.gene003226.t1 | MTR_5g013690 | 31.373 | 204 | 118 | 4 | 88 | 280 | 80 | 272 | 2.65e-26 | 104 |
MS.gene003226.t1 | MTR_5g013690 | 31.373 | 204 | 118 | 4 | 88 | 280 | 143 | 335 | 2.92e-26 | 105 |
MS.gene003226.t1 | MTR_3g117970 | 35.955 | 178 | 88 | 5 | 91 | 267 | 31 | 183 | 4.90e-23 | 94.0 |
MS.gene003226.t1 | MTR_1g019250 | 30.481 | 187 | 129 | 1 | 83 | 269 | 145 | 330 | 6.92e-23 | 96.7 |
MS.gene003226.t1 | MTR_4g036485 | 27.830 | 212 | 129 | 3 | 66 | 267 | 2 | 199 | 7.86e-22 | 91.3 |
MS.gene003226.t1 | MTR_4g099060 | 31.132 | 212 | 132 | 4 | 75 | 280 | 83 | 286 | 1.20e-19 | 86.7 |
MS.gene003226.t1 | MTR_4g099060 | 31.132 | 212 | 132 | 4 | 75 | 280 | 128 | 331 | 1.68e-19 | 87.0 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene003226.t1 | AT4G19700 | 50.368 | 272 | 121 | 6 | 15 | 280 | 40 | 303 | 1.01e-76 | 236 |
MS.gene003226.t1 | AT5G45100 | 46.831 | 284 | 124 | 7 | 6 | 280 | 1 | 266 | 1.61e-73 | 226 |
MS.gene003226.t1 | AT5G45100 | 46.503 | 286 | 126 | 7 | 4 | 280 | 26 | 293 | 4.01e-73 | 226 |
MS.gene003226.t1 | AT3G12920 | 40.134 | 299 | 144 | 9 | 2 | 280 | 51 | 334 | 1.32e-60 | 195 |
MS.gene003226.t1 | AT1G79110 | 47.297 | 222 | 92 | 4 | 80 | 280 | 115 | 332 | 5.29e-55 | 181 |
MS.gene003226.t1 | AT1G79110 | 47.297 | 222 | 92 | 4 | 80 | 280 | 137 | 354 | 9.24e-55 | 181 |
MS.gene003226.t1 | AT1G79110 | 46.667 | 225 | 92 | 5 | 80 | 280 | 137 | 357 | 9.69e-53 | 176 |
MS.gene003226.t1 | AT1G45976 | 32.673 | 202 | 125 | 4 | 71 | 269 | 122 | 315 | 1.15e-28 | 112 |
MS.gene003226.t1 | AT1G60610 | 30.698 | 215 | 139 | 3 | 70 | 277 | 126 | 337 | 3.10e-25 | 103 |
MS.gene003226.t1 | AT1G60610 | 30.698 | 215 | 139 | 3 | 70 | 277 | 126 | 337 | 3.10e-25 | 103 |
MS.gene003226.t1 | AT1G60610 | 30.698 | 215 | 139 | 3 | 70 | 277 | 126 | 337 | 3.10e-25 | 103 |
MS.gene003226.t1 | AT1G60610 | 30.698 | 215 | 139 | 3 | 70 | 277 | 126 | 337 | 3.10e-25 | 103 |
MS.gene003226.t1 | AT1G60610 | 30.698 | 215 | 139 | 3 | 70 | 277 | 126 | 337 | 3.10e-25 | 103 |
MS.gene003226.t1 | AT1G10650 | 31.579 | 209 | 129 | 4 | 80 | 280 | 81 | 283 | 1.37e-23 | 97.4 |
MS.gene003226.t1 | AT1G10650 | 31.579 | 209 | 129 | 4 | 80 | 280 | 137 | 339 | 1.80e-23 | 98.2 |
MS.gene003226.t1 | AT4G35070 | 30.055 | 183 | 122 | 3 | 88 | 269 | 22 | 199 | 1.95e-20 | 87.4 |
MS.gene003226.t1 | AT4G35070 | 30.055 | 183 | 122 | 3 | 88 | 269 | 77 | 254 | 2.41e-20 | 88.2 |
MS.gene003226.t1 | AT1G32740 | 31.111 | 225 | 136 | 7 | 65 | 275 | 44 | 263 | 3.20e-20 | 88.2 |
MS.gene003226.t1 | AT1G32740 | 31.111 | 225 | 136 | 7 | 65 | 275 | 44 | 263 | 3.20e-20 | 88.2 |
MS.gene003226.t1 | AT1G32740 | 31.111 | 225 | 136 | 7 | 65 | 275 | 77 | 296 | 4.83e-20 | 88.2 |
MS.gene003226.t1 | AT1G32740 | 31.111 | 225 | 136 | 7 | 65 | 275 | 88 | 307 | 5.52e-20 | 88.2 |
MS.gene003226.t1 | AT4G17680 | 25.385 | 260 | 153 | 7 | 51 | 277 | 61 | 312 | 2.77e-18 | 83.6 |
MS.gene003226.t1 | AT5G47050 | 26.000 | 250 | 157 | 4 | 35 | 280 | 75 | 300 | 5.05e-18 | 82.4 |
MS.gene003226.t1 | AT4G17680 | 25.628 | 199 | 134 | 4 | 85 | 277 | 50 | 240 | 1.72e-17 | 80.1 |
MS.gene003226.t1 | AT4G17680 | 26.087 | 184 | 122 | 4 | 100 | 277 | 13 | 188 | 7.46e-14 | 68.9 |
MS.gene003226.t1 | AT2G12290 | 50.769 | 65 | 31 | 1 | 143 | 207 | 28 | 91 | 4.81e-12 | 62.4 |
Find 55 sgRNAs with CRISPR-Local
Find 85 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CAAATTGTTACGTAAATAAT+TGG | 0.209804 | 2.1:+62214012 | None:intergenic |
CAAACATTGGATTGATAAAA+TGG | 0.230510 | 2.1:+62215088 | None:intergenic |
AAAGAATAGGGAAGCTAAAT+TGG | 0.250485 | 2.1:-62214114 | MS.gene003226:CDS |
CAATTATTTACGTAACAATT+TGG | 0.251798 | 2.1:-62214011 | MS.gene003226:CDS |
TTGTGTTGTTACTACCTTGT+AGG | 0.317083 | 2.1:-62213814 | MS.gene003226:CDS |
GATGAAGAGATTCAAAGAAT+AGG | 0.332254 | 2.1:-62214127 | MS.gene003226:CDS |
ATGAAGAGATTCAAAGAATA+GGG | 0.348961 | 2.1:-62214126 | MS.gene003226:CDS |
AAGTTTAAGTGCTGAAAATC+AGG | 0.355207 | 2.1:-62214071 | MS.gene003226:CDS |
GAAAGTGAGAATGGAGTTAG+AGG | 0.361074 | 2.1:-62214224 | MS.gene003226:CDS |
ATAGATTCATGCATTGTTGT+TGG | 0.375132 | 2.1:+62215115 | None:intergenic |
TAACAATTTGGAACAAGTTA+TGG | 0.392210 | 2.1:-62213999 | MS.gene003226:CDS |
GACTGTCGGTGGTGGTGGTT+TGG | 0.395247 | 2.1:-62213873 | MS.gene003226:CDS |
ATGACGCTGAATCGAGTTGC+AGG | 0.398728 | 2.1:-62213934 | MS.gene003226:CDS |
TGCGATCAATATCAGATTGC+TGG | 0.414409 | 2.1:+62214894 | None:intergenic |
TCGGTGGTGGTGGTTTGGTT+AGG | 0.423324 | 2.1:-62213868 | MS.gene003226:CDS |
AGACCACTATCAGCTCTGTT+TGG | 0.425440 | 2.1:+62215061 | None:intergenic |
GTTAGGATGTGTAAGAATTG+TGG | 0.438375 | 2.1:-62213851 | MS.gene003226:CDS |
TCATGCATTGTTGTTGGAAG+AGG | 0.451659 | 2.1:+62215121 | None:intergenic |
ACAGAATGAGAAAGTGAGAA+TGG | 0.452277 | 2.1:-62214233 | MS.gene003226:intron |
TCATCATGCCGCGGCGGCCG+AGG | 0.459228 | 2.1:-62213957 | MS.gene003226:CDS |
TAAGTGCTGAAAATCAGGTT+TGG | 0.460640 | 2.1:-62214066 | MS.gene003226:CDS |
CAAAGGCACAAATGCCTACA+AGG | 0.486790 | 2.1:+62213800 | None:intergenic |
TGTGCCTTTGCAATGTGTGC+GGG | 0.488765 | 2.1:-62213787 | MS.gene003226:CDS |
GCGGCGACTGTCGGTGGTGG+TGG | 0.490968 | 2.1:-62213878 | MS.gene003226:CDS |
TTAGGATGTGTAAGAATTGT+GGG | 0.497897 | 2.1:-62213850 | MS.gene003226:CDS |
TGCTGAAAATCAGGTTTGGA+GGG | 0.519581 | 2.1:-62214062 | MS.gene003226:CDS |
GTGTAAGAATTGTGGGGTGA+GGG | 0.520811 | 2.1:-62213843 | MS.gene003226:CDS |
GTGCTGAAAATCAGGTTTGG+AGG | 0.526743 | 2.1:-62214063 | MS.gene003226:CDS |
ACTCGATTCAGCGTCATCCT+CGG | 0.538662 | 2.1:+62213940 | None:intergenic |
TGTGTAAGAATTGTGGGGTG+AGG | 0.539846 | 2.1:-62213844 | MS.gene003226:CDS |
GAGTTGCAGGAGTAATGGTC+CGG | 0.543276 | 2.1:-62213921 | MS.gene003226:CDS |
AAATGTCCAGTGTGTGACTC+TGG | 0.547650 | 2.1:-62213752 | MS.gene003226:CDS |
ACCGCGGCGACTGTCGGTGG+TGG | 0.548750 | 2.1:-62213881 | MS.gene003226:CDS |
TCTGTTTGGATCACAAACAT+TGG | 0.555502 | 2.1:+62215075 | None:intergenic |
TGAATTATACAATGTTCAGA+TGG | 0.557789 | 2.1:-62215155 | MS.gene003226:CDS |
GTGTCTTCACCATCGTCAGC+CGG | 0.559591 | 2.1:+62213902 | None:intergenic |
AATGAGGCAATCAAGGATGT+TGG | 0.559955 | 2.1:-62214194 | MS.gene003226:CDS |
GAATCGAGTTGCAGGAGTAA+TGG | 0.563189 | 2.1:-62213926 | MS.gene003226:CDS |
AGCGTCATCCTCGGCCGCCG+CGG | 0.563259 | 2.1:+62213949 | None:intergenic |
GAAGACACCGCGGCGACTGT+CGG | 0.571935 | 2.1:-62213887 | MS.gene003226:CDS |
TTGTGCCTTTGCAATGTGTG+CGG | 0.572306 | 2.1:-62213788 | MS.gene003226:CDS |
TCCAGTGTGTGACTCTGGCA+TGG | 0.597448 | 2.1:-62213747 | MS.gene003226:CDS |
CACTGGACATTTACGAACAG+TGG | 0.609918 | 2.1:+62213763 | None:intergenic |
GACACCGCGGCGACTGTCGG+TGG | 0.614188 | 2.1:-62213884 | MS.gene003226:CDS |
AGTAATGGTCCGGCTGACGA+TGG | 0.624311 | 2.1:-62213911 | MS.gene003226:CDS |
AGTTATGGCACATGTCAATG+AGG | 0.626941 | 2.1:-62213984 | MS.gene003226:CDS |
GATCCAAACAGAGCTGATAG+TGG | 0.638226 | 2.1:-62215064 | MS.gene003226:CDS |
GTTATGGCACATGTCAATGA+GGG | 0.650135 | 2.1:-62213983 | MS.gene003226:CDS |
TCCATGCCAGAGTCACACAC+TGG | 0.661955 | 2.1:+62213746 | None:intergenic |
TGGACCCGCACACATTGCAA+AGG | 0.662474 | 2.1:+62213783 | None:intergenic |
TGAGGGACATCATCATGCCG+CGG | 0.670191 | 2.1:-62213966 | MS.gene003226:CDS |
ACCACCACCGACAGTCGCCG+CGG | 0.694431 | 2.1:+62213880 | None:intergenic |
GGGACATCATCATGCCGCGG+CGG | 0.714631 | 2.1:-62213963 | MS.gene003226:CDS |
TAGGATGTGTAAGAATTGTG+GGG | 0.749557 | 2.1:-62213849 | MS.gene003226:CDS |
TGACGATGGTGAAGACACCG+CGG | 0.808171 | 2.1:-62213897 | MS.gene003226:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAAAATAAATAAATTATATT+TGG | - | chr2.1:62214390-62214409 | MS.gene003226:intron | 0.0% |
!! | AAAATAAATAAATTATATTT+GGG | - | chr2.1:62214391-62214410 | MS.gene003226:intron | 0.0% |
!! | TTTAAAAATAAATAAAAAAA+CGG | + | chr2.1:62214261-62214280 | None:intergenic | 0.0% |
!!! | TTTTATTTATTTTTAAATTA+TGG | - | chr2.1:62214264-62214283 | MS.gene003226:intron | 0.0% |
!!! | ATAAACTAATTTTCTATAAA+AGG | - | chr2.1:62214424-62214443 | MS.gene003226:intron | 10.0% |
!!! | TATTTTTATGATAATCAAAA+CGG | + | chr2.1:62214377-62214396 | None:intergenic | 10.0% |
!!! | TATTTTTGCTAATATTTTTA+TGG | - | chr2.1:62214536-62214555 | MS.gene003226:intron | 10.0% |
!! | ACTTTGAATGAAAATATTAA+TGG | - | chr2.1:62214204-62214223 | MS.gene003226:CDS | 15.0% |
!! | CTTTGAATGAAAATATTAAT+GGG | - | chr2.1:62214205-62214224 | MS.gene003226:CDS | 15.0% |
!! | TTTGAATGAAAATATTAATG+GGG | - | chr2.1:62214206-62214225 | MS.gene003226:CDS | 15.0% |
!!! | TTATTTTTAAATTATGGAGT+GGG | - | chr2.1:62214270-62214289 | MS.gene003226:intron | 15.0% |
!!! | TTTAAGTTTTTTTTAACATG+CGG | - | chr2.1:62214322-62214341 | MS.gene003226:intron | 15.0% |
!!! | TTTATTTTTAAATTATGGAG+TGG | - | chr2.1:62214269-62214288 | MS.gene003226:intron | 15.0% |
!! | CAAATTGTTACGTAAATAAT+TGG | + | chr2.1:62214875-62214894 | None:intergenic | 20.0% |
!! | CAATTATTTACGTAACAATT+TGG | - | chr2.1:62214873-62214892 | MS.gene003226:intron | 20.0% |
!! | TAAATTGAGTAACTGATAAA+GGG | - | chr2.1:62214165-62214184 | MS.gene003226:CDS | 20.0% |
!! | TAATTACACATAAATAGTAC+AGG | + | chr2.1:62214606-62214625 | None:intergenic | 20.0% |
!! | TTGTGTTTGAAAAAGAAAAA+AGG | - | chr2.1:62214104-62214123 | MS.gene003226:CDS | 20.0% |
!!! | GGTGTTTTATATTTTCTAAA+AGG | - | chr2.1:62214227-62214246 | MS.gene003226:CDS | 20.0% |
!!! | TATTTTTAAATTATGGAGTG+GGG | - | chr2.1:62214271-62214290 | MS.gene003226:intron | 20.0% |
! | AAAAAATTACATGATGAGCT+AGG | + | chr2.1:62214017-62214036 | None:intergenic | 25.0% |
! | AGAGATAATTAAACAAGTGA+AGG | + | chr2.1:62214043-62214062 | None:intergenic | 25.0% |
! | ATGAAGAGATTCAAAGAATA+GGG | - | chr2.1:62214758-62214777 | MS.gene003226:intron | 25.0% |
! | CAAACATTGGATTGATAAAA+TGG | + | chr2.1:62213799-62213818 | None:intergenic | 25.0% |
! | CTAAATTGAGTAACTGATAA+AGG | - | chr2.1:62214164-62214183 | MS.gene003226:CDS | 25.0% |
! | TGAATTATACAATGTTCAGA+TGG | - | chr2.1:62213729-62213748 | MS.gene003226:CDS | 25.0% |
!! | ATTACTCTATTCTTTTGATG+AGG | + | chr2.1:62213916-62213935 | None:intergenic | 25.0% |
!! | TAACAATTTGGAACAAGTTA+TGG | - | chr2.1:62214885-62214904 | MS.gene003226:CDS | 25.0% |
!!! | AAGAGATTTTTCAACTGAAT+TGG | - | chr2.1:62213879-62213898 | MS.gene003226:CDS | 25.0% |
AAAGAATAGGGAAGCTAAAT+TGG | - | chr2.1:62214770-62214789 | MS.gene003226:intron | 30.0% | |
AACAAAAAATGAGGCAATCA+AGG | - | chr2.1:62214683-62214702 | MS.gene003226:intron | 30.0% | |
AGTTAGAGGAACAAAAAATG+AGG | - | chr2.1:62214674-62214693 | MS.gene003226:intron | 30.0% | |
ATAGATTCATGCATTGTTGT+TGG | + | chr2.1:62213772-62213791 | None:intergenic | 30.0% | |
ATGCGGAGAAAACTTAAATA+GGG | - | chr2.1:62214339-62214358 | MS.gene003226:intron | 30.0% | |
GATGAAGAGATTCAAAGAAT+AGG | - | chr2.1:62214757-62214776 | MS.gene003226:intron | 30.0% | |
TTAGGATGTGTAAGAATTGT+GGG | - | chr2.1:62215034-62215053 | MS.gene003226:CDS | 30.0% | |
!! | AAGTTTAAGTGCTGAAAATC+AGG | - | chr2.1:62214813-62214832 | MS.gene003226:intron | 30.0% |
ACAGAATGAGAAAGTGAGAA+TGG | - | chr2.1:62214651-62214670 | MS.gene003226:intron | 35.0% | |
CATGCGGAGAAAACTTAAAT+AGG | - | chr2.1:62214338-62214357 | MS.gene003226:intron | 35.0% | |
GTTAGGATGTGTAAGAATTG+TGG | - | chr2.1:62215033-62215052 | MS.gene003226:CDS | 35.0% | |
TAGGATGTGTAAGAATTGTG+GGG | - | chr2.1:62215035-62215054 | MS.gene003226:CDS | 35.0% | |
TCTGTTTGGATCACAAACAT+TGG | + | chr2.1:62213812-62213831 | None:intergenic | 35.0% | |
! | ACTCTATTCTTTTGATGAGG+TGG | + | chr2.1:62213913-62213932 | None:intergenic | 35.0% |
! | TTGTGTTGTTACTACCTTGT+AGG | - | chr2.1:62215070-62215089 | MS.gene003226:CDS | 35.0% |
!! | CTTGAACGTTTTCTTTGAAG+AGG | + | chr2.1:62213862-62213881 | None:intergenic | 35.0% |
!! | TAAGTGCTGAAAATCAGGTT+TGG | - | chr2.1:62214818-62214837 | MS.gene003226:intron | 35.0% |
AATGAGGCAATCAAGGATGT+TGG | - | chr2.1:62214690-62214709 | MS.gene003226:intron | 40.0% | |
AGTTATGGCACATGTCAATG+AGG | - | chr2.1:62214900-62214919 | MS.gene003226:CDS | 40.0% | |
GAAAGTGAGAATGGAGTTAG+AGG | - | chr2.1:62214660-62214679 | MS.gene003226:intron | 40.0% | |
GTTATGGCACATGTCAATGA+GGG | - | chr2.1:62214901-62214920 | MS.gene003226:CDS | 40.0% | |
TGCGATCAATATCAGATTGC+TGG | + | chr2.1:62213993-62214012 | None:intergenic | 40.0% | |
TGCTGAAAATCAGGTTTGGA+GGG | - | chr2.1:62214822-62214841 | MS.gene003226:intron | 40.0% | |
! | TCATGCATTGTTGTTGGAAG+AGG | + | chr2.1:62213766-62213785 | None:intergenic | 40.0% |
AAATGTCCAGTGTGTGACTC+TGG | - | chr2.1:62215132-62215151 | MS.gene003226:CDS | 45.0% | |
AGACCACTATCAGCTCTGTT+TGG | + | chr2.1:62213826-62213845 | None:intergenic | 45.0% | |
CACTGGACATTTACGAACAG+TGG | + | chr2.1:62215124-62215143 | None:intergenic | 45.0% | |
GATCCAAACAGAGCTGATAG+TGG | - | chr2.1:62213820-62213839 | MS.gene003226:CDS | 45.0% | |
GTGCTGAAAATCAGGTTTGG+AGG | - | chr2.1:62214821-62214840 | MS.gene003226:intron | 45.0% | |
GTGTAAGAATTGTGGGGTGA+GGG | - | chr2.1:62215041-62215060 | MS.gene003226:CDS | 45.0% | |
TGTGTAAGAATTGTGGGGTG+AGG | - | chr2.1:62215040-62215059 | MS.gene003226:CDS | 45.0% | |
TTGTGCCTTTGCAATGTGTG+CGG | - | chr2.1:62215096-62215115 | MS.gene003226:CDS | 45.0% | |
! | CAAAGGCACAAATGCCTACA+AGG | + | chr2.1:62215087-62215106 | None:intergenic | 45.0% |
! | GAATCGAGTTGCAGGAGTAA+TGG | - | chr2.1:62214958-62214977 | MS.gene003226:CDS | 45.0% |
!! | AAATAAATAAATTATATTTG+GGG | - | chr2.1:62214392-62214411 | MS.gene003226:intron | 5.0% |
ACTCGATTCAGCGTCATCCT+CGG | + | chr2.1:62214947-62214966 | None:intergenic | 50.0% | |
GAGTTGCAGGAGTAATGGTC+CGG | - | chr2.1:62214963-62214982 | MS.gene003226:CDS | 50.0% | |
TGTGCCTTTGCAATGTGTGC+GGG | - | chr2.1:62215097-62215116 | MS.gene003226:CDS | 50.0% | |
! | ATGACGCTGAATCGAGTTGC+AGG | - | chr2.1:62214950-62214969 | MS.gene003226:CDS | 50.0% |
AGTAATGGTCCGGCTGACGA+TGG | - | chr2.1:62214973-62214992 | MS.gene003226:CDS | 55.0% | |
GTGTCTTCACCATCGTCAGC+CGG | + | chr2.1:62214985-62215004 | None:intergenic | 55.0% | |
TCCAGTGTGTGACTCTGGCA+TGG | - | chr2.1:62215137-62215156 | MS.gene003226:CDS | 55.0% | |
TCCATGCCAGAGTCACACAC+TGG | + | chr2.1:62215141-62215160 | None:intergenic | 55.0% | |
TGACGATGGTGAAGACACCG+CGG | - | chr2.1:62214987-62215006 | MS.gene003226:CDS | 55.0% | |
TGAGGGACATCATCATGCCG+CGG | - | chr2.1:62214918-62214937 | MS.gene003226:CDS | 55.0% | |
TGGACCCGCACACATTGCAA+AGG | + | chr2.1:62215104-62215123 | None:intergenic | 55.0% | |
!! | TCGGTGGTGGTGGTTTGGTT+AGG | - | chr2.1:62215016-62215035 | MS.gene003226:CDS | 55.0% |
!! | GACTGTCGGTGGTGGTGGTT+TGG | - | chr2.1:62215011-62215030 | MS.gene003226:CDS | 60.0% |
GAAGACACCGCGGCGACTGT+CGG | - | chr2.1:62214997-62215016 | MS.gene003226:CDS | 65.0% | |
GGGACATCATCATGCCGCGG+CGG | - | chr2.1:62214921-62214940 | MS.gene003226:CDS | 65.0% | |
ACCACCACCGACAGTCGCCG+CGG | + | chr2.1:62215007-62215026 | None:intergenic | 70.0% | |
ACCGCGGCGACTGTCGGTGG+TGG | - | chr2.1:62215003-62215022 | MS.gene003226:CDS | 75.0% | |
AGCGTCATCCTCGGCCGCCG+CGG | + | chr2.1:62214938-62214957 | None:intergenic | 75.0% | |
GACACCGCGGCGACTGTCGG+TGG | - | chr2.1:62215000-62215019 | MS.gene003226:CDS | 75.0% | |
TCATCATGCCGCGGCGGCCG+AGG | - | chr2.1:62214927-62214946 | MS.gene003226:CDS | 75.0% | |
! | GCGGCGACTGTCGGTGGTGG+TGG | - | chr2.1:62215006-62215025 | MS.gene003226:CDS | 75.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2.1 | gene | 62213718 | 62215188 | 62213718 | ID=MS.gene003226 |
chr2.1 | mRNA | 62213718 | 62215188 | 62213718 | ID=MS.gene003226.t1;Parent=MS.gene003226 |
chr2.1 | exon | 62214880 | 62215188 | 62214880 | ID=MS.gene003226.t1.exon1;Parent=MS.gene003226.t1 |
chr2.1 | CDS | 62214880 | 62215188 | 62214880 | ID=cds.MS.gene003226.t1;Parent=MS.gene003226.t1 |
chr2.1 | exon | 62213718 | 62214251 | 62213718 | ID=MS.gene003226.t1.exon2;Parent=MS.gene003226.t1 |
chr2.1 | CDS | 62213718 | 62214251 | 62213718 | ID=cds.MS.gene003226.t1;Parent=MS.gene003226.t1 |
Gene Sequence |
Protein sequence |