Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene56438.t1 | XP_003607849.1 | 95.6 | 297 | 9 | 1 | 1 | 297 | 1 | 293 | 8.40E-100 | 373.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene56438.t1 | O81851 | 45.7 | 127 | 67 | 1 | 173 | 297 | 177 | 303 | 1.3e-21 | 105.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene56438.t1 | G7JIQ6 | 95.6 | 297 | 9 | 1 | 1 | 297 | 1 | 293 | 6.0e-100 | 373.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene02027 | MS.gene56438 | PPI |
| MS.gene003226 | MS.gene56438 | PPI |
| MS.gene067574 | MS.gene56438 | PPI |
| MS.gene56438 | MS.gene02785 | PPI |
| MS.gene74604 | MS.gene56438 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene56438.t1 | MTR_4g083540 | 96.633 | 297 | 6 | 1 | 1 | 297 | 1 | 293 | 0.0 | 591 |
| MS.gene56438.t1 | MTR_2g028830 | 50.617 | 324 | 128 | 8 | 1 | 297 | 1 | 319 | 1.71e-100 | 297 |
| MS.gene56438.t1 | MTR_2g069350 | 36.240 | 367 | 163 | 11 | 1 | 297 | 1 | 366 | 5.32e-60 | 195 |
| MS.gene56438.t1 | MTR_5g013690 | 32.500 | 200 | 127 | 5 | 102 | 294 | 134 | 332 | 1.08e-27 | 110 |
| MS.gene56438.t1 | MTR_5g013690 | 32.500 | 200 | 127 | 5 | 102 | 294 | 71 | 269 | 1.90e-27 | 107 |
| MS.gene56438.t1 | MTR_4g099060 | 34.300 | 207 | 119 | 5 | 98 | 294 | 84 | 283 | 7.45e-26 | 103 |
| MS.gene56438.t1 | MTR_4g099060 | 34.300 | 207 | 119 | 5 | 98 | 294 | 129 | 328 | 1.32e-25 | 104 |
| MS.gene56438.t1 | MTR_4g036485 | 32.759 | 174 | 109 | 3 | 112 | 285 | 35 | 200 | 4.94e-22 | 92.0 |
| MS.gene56438.t1 | MTR_1g019250 | 29.907 | 214 | 132 | 5 | 85 | 284 | 119 | 328 | 5.97e-22 | 94.4 |
| MS.gene56438.t1 | MTR_3g117970 | 30.270 | 185 | 104 | 4 | 104 | 285 | 22 | 184 | 3.10e-17 | 78.6 |
| MS.gene56438.t1 | MTR_4g073070 | 30.570 | 193 | 107 | 6 | 109 | 297 | 85 | 254 | 1.40e-13 | 69.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene56438.t1 | AT5G45100 | 42.532 | 308 | 151 | 7 | 1 | 297 | 1 | 293 | 3.09e-67 | 212 |
| MS.gene56438.t1 | AT4G19700 | 39.869 | 306 | 172 | 8 | 1 | 297 | 1 | 303 | 4.75e-63 | 201 |
| MS.gene56438.t1 | AT5G45100 | 47.210 | 233 | 104 | 4 | 76 | 297 | 42 | 266 | 2.59e-61 | 196 |
| MS.gene56438.t1 | AT3G12920 | 38.127 | 299 | 143 | 9 | 25 | 297 | 52 | 334 | 5.58e-54 | 179 |
| MS.gene56438.t1 | AT1G79110 | 43.578 | 218 | 101 | 4 | 102 | 297 | 115 | 332 | 3.26e-48 | 164 |
| MS.gene56438.t1 | AT1G79110 | 43.578 | 218 | 101 | 4 | 102 | 297 | 137 | 354 | 4.68e-48 | 164 |
| MS.gene56438.t1 | AT1G79110 | 42.986 | 221 | 101 | 5 | 102 | 297 | 137 | 357 | 5.18e-46 | 159 |
| MS.gene56438.t1 | AT1G60610 | 30.932 | 236 | 135 | 4 | 73 | 294 | 116 | 337 | 6.72e-25 | 102 |
| MS.gene56438.t1 | AT1G60610 | 30.932 | 236 | 135 | 4 | 73 | 294 | 116 | 337 | 6.72e-25 | 102 |
| MS.gene56438.t1 | AT1G60610 | 30.932 | 236 | 135 | 4 | 73 | 294 | 116 | 337 | 6.72e-25 | 102 |
| MS.gene56438.t1 | AT1G60610 | 30.932 | 236 | 135 | 4 | 73 | 294 | 116 | 337 | 6.72e-25 | 102 |
| MS.gene56438.t1 | AT1G60610 | 30.932 | 236 | 135 | 4 | 73 | 294 | 116 | 337 | 6.72e-25 | 102 |
| MS.gene56438.t1 | AT1G45976 | 27.982 | 218 | 128 | 4 | 85 | 286 | 111 | 315 | 1.65e-23 | 98.6 |
| MS.gene56438.t1 | AT1G10650 | 30.374 | 214 | 127 | 4 | 97 | 294 | 73 | 280 | 4.82e-23 | 96.3 |
| MS.gene56438.t1 | AT1G10650 | 30.374 | 214 | 127 | 4 | 97 | 294 | 129 | 336 | 6.18e-23 | 97.1 |
| MS.gene56438.t1 | AT4G35070 | 32.240 | 183 | 114 | 3 | 108 | 284 | 74 | 252 | 6.77e-21 | 90.1 |
| MS.gene56438.t1 | AT4G35070 | 32.240 | 183 | 114 | 3 | 108 | 284 | 19 | 197 | 1.43e-20 | 88.2 |
| MS.gene56438.t1 | AT1G32740 | 30.319 | 188 | 125 | 2 | 111 | 292 | 76 | 263 | 5.48e-20 | 87.8 |
| MS.gene56438.t1 | AT1G32740 | 30.319 | 188 | 125 | 2 | 111 | 292 | 76 | 263 | 5.48e-20 | 87.8 |
| MS.gene56438.t1 | AT1G32740 | 30.319 | 188 | 125 | 2 | 111 | 292 | 109 | 296 | 5.77e-20 | 88.2 |
| MS.gene56438.t1 | AT1G32740 | 29.949 | 197 | 114 | 4 | 111 | 292 | 120 | 307 | 6.48e-20 | 88.2 |
| MS.gene56438.t1 | AT5G47050 | 28.643 | 199 | 131 | 2 | 104 | 294 | 102 | 297 | 1.67e-19 | 87.0 |
| MS.gene56438.t1 | AT4G17680 | 26.070 | 257 | 152 | 6 | 73 | 294 | 59 | 312 | 1.17e-18 | 84.7 |
| MS.gene56438.t1 | AT4G17680 | 26.667 | 195 | 133 | 3 | 107 | 294 | 49 | 240 | 1.05e-17 | 80.9 |
| MS.gene56438.t1 | AT4G17680 | 27.869 | 183 | 121 | 4 | 119 | 294 | 10 | 188 | 2.59e-13 | 67.8 |
Find 55 sgRNAs with CRISPR-Local
Find 67 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CGATTTCAGATTGTTGATTT+TGG | 0.126414 | 4.3:-27900745 | None:intergenic |
| GTTTCTTTGTTACTGCTTCT+TGG | 0.130913 | 4.3:-27900976 | None:intergenic |
| GGGAAATTGTGCAGCGGTTG+TGG | 0.242036 | 4.3:+27901268 | MS.gene56438:CDS |
| GTAGAATTGTTGATTGAATT+TGG | 0.242276 | 4.3:-27900477 | None:intergenic |
| CTGAAACGCTTTCTTGAATC+AGG | 0.252113 | 4.3:-27900623 | None:intergenic |
| AAAAGCGAAAACACTGATTA+TGG | 0.280960 | 4.3:+27901057 | MS.gene56438:CDS |
| TGAAAAGGAAAGAACGATTC+AGG | 0.297477 | 4.3:-27900548 | None:intergenic |
| GGAAATTGTGCAGCGGTTGT+GGG | 0.352965 | 4.3:+27901269 | MS.gene56438:CDS |
| GTGACAGTACTATCAGCTTT+TGG | 0.356081 | 4.3:-27900590 | None:intergenic |
| TGATTATGGAGAATCAGATT+TGG | 0.382990 | 4.3:+27901071 | MS.gene56438:CDS |
| CAGAAAGATGGTTGATGAAA+AGG | 0.384641 | 4.3:-27900563 | None:intergenic |
| TAACGAATTAGAACAAGTTC+TGG | 0.406835 | 4.3:+27901138 | MS.gene56438:CDS |
| CATGTGAATAGCACCATTCA+TGG | 0.420481 | 4.3:-27900507 | None:intergenic |
| AGAAGAAGAGATTCAGAGAA+TGG | 0.421799 | 4.3:+27901009 | MS.gene56438:CDS |
| GAATCAGATTTGGAGAGAAA+TGG | 0.423763 | 4.3:+27901081 | MS.gene56438:CDS |
| TGTGCAGCGGTTGTGGGGTA+AGG | 0.425056 | 4.3:+27901275 | MS.gene56438:CDS |
| CACAAACACAAATGCCTACA+TGG | 0.434344 | 4.3:-27901319 | None:intergenic |
| AAGCGTCGTCGGCGGTGGTT+GGG | 0.435829 | 4.3:+27901248 | MS.gene56438:CDS |
| TTCTACAATGCTTCCATGAA+TGG | 0.441017 | 4.3:+27900494 | MS.gene56438:CDS |
| TCTTGAATCAGGGATGTGAT+AGG | 0.458364 | 4.3:-27900612 | None:intergenic |
| GGAAGAAGCGTCGTCGGCGG+TGG | 0.464269 | 4.3:+27901243 | MS.gene56438:CDS |
| ACAGACAGAGAGAGTGAGAA+TGG | 0.475032 | 4.3:+27900904 | MS.gene56438:intron |
| GAAGCGTCGTCGGCGGTGGT+TGG | 0.475906 | 4.3:+27901247 | MS.gene56438:CDS |
| GAAGATGCAGCGTCGAGTTG+TGG | 0.486897 | 4.3:+27901187 | MS.gene56438:CDS |
| CGTGAAGGAGGAGGTGGTGG+TGG | 0.493521 | 4.3:+27901222 | MS.gene56438:CDS |
| GAAAAGGAAAGAACGATTCA+GGG | 0.507955 | 4.3:-27900547 | None:intergenic |
| TCAGGGATTGTTGAAGACAT+AGG | 0.522810 | 4.3:-27900530 | None:intergenic |
| CCTCTCAATTCTCATGGCAG+TGG | 0.525047 | 4.3:+27900306 | None:intergenic |
| CCACGTGAAGGAGGAGGTGG+TGG | 0.525931 | 4.3:+27901219 | MS.gene56438:CDS |
| TTGTGTTTGTGTACAATGTG+TGG | 0.529559 | 4.3:+27901331 | MS.gene56438:CDS |
| ACGCTGCATCTTCATCGTTA+CGG | 0.543093 | 4.3:-27901177 | None:intergenic |
| TAGTGCTGTTATTGCCATGT+AGG | 0.545970 | 4.3:+27901305 | MS.gene56438:CDS |
| GTGCAGCGGTTGTGGGGTAA+GGG | 0.555636 | 4.3:+27901276 | MS.gene56438:CDS |
| TGTGTTTGTGTACAATGTGT+GGG | 0.556297 | 4.3:+27901332 | MS.gene56438:CDS |
| GGAGAGAAGAAATTCATATG+AGG | 0.564999 | 4.3:-27900334 | None:intergenic |
| AAAGAGGGCAATTACGAATG+TGG | 0.572431 | 4.3:-27901357 | None:intergenic |
| CACAGTCACAAATCAATCAC+AGG | 0.574904 | 4.3:+27900356 | MS.gene56438:CDS |
| CCACCACGTGAAGGAGGAGG+TGG | 0.585785 | 4.3:+27901216 | MS.gene56438:CDS |
| GGTGGTGGAAGAAGCGTCGT+CGG | 0.587267 | 4.3:+27901237 | MS.gene56438:CDS |
| AAGAGGGCAATTACGAATGT+GGG | 0.595280 | 4.3:-27901356 | None:intergenic |
| TGAAACGCTTTCTTGAATCA+GGG | 0.595468 | 4.3:-27900622 | None:intergenic |
| GAGAAGAAATTCATATGAGG+AGG | 0.604224 | 4.3:-27900331 | None:intergenic |
| AGATTCTGATCAACAAAGGA+AGG | 0.605193 | 4.3:-27900710 | None:intergenic |
| CCACCACCTCCTCCTTCACG+TGG | 0.618649 | 4.3:-27901219 | None:intergenic |
| GGTGGAAGAAGCGTCGTCGG+CGG | 0.623677 | 4.3:+27901240 | MS.gene56438:CDS |
| GTGGTTGGGAAATTGTGCAG+CGG | 0.623860 | 4.3:+27901262 | MS.gene56438:CDS |
| GCAATCAAGAATGCTACAAG+CGG | 0.626043 | 4.3:+27900949 | MS.gene56438:CDS |
| TAACCACCACGTGAAGGAGG+AGG | 0.626115 | 4.3:+27901213 | MS.gene56438:CDS |
| GAGGAGATTCTGATCAACAA+AGG | 0.626764 | 4.3:-27900714 | None:intergenic |
| CTGTGATTGATTTGTGACTG+TGG | 0.627583 | 4.3:-27900355 | None:intergenic |
| GAAATTGTGCAGCGGTTGTG+GGG | 0.636186 | 4.3:+27901270 | MS.gene56438:CDS |
| CCACCTCCTCCTTCACGTGG+TGG | 0.641078 | 4.3:-27901216 | None:intergenic |
| AAGAGTGTATGATTCTTCAG+TGG | 0.660791 | 4.3:-27900651 | None:intergenic |
| AAGTAACCACCACGTGAAGG+AGG | 0.662727 | 4.3:+27901210 | MS.gene56438:CDS |
| TGGAAGTAACCACCACGTGA+AGG | 0.663711 | 4.3:+27901207 | MS.gene56438:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AGAAAAAAGAAACTGTTAAA+AGG | + | chr4.3:27900804-27900823 | MS.gene56438:intron | 20.0% |
| !! | GTATAATATAAGAAAACTGA+AGG | - | chr4.3:27900412-27900431 | None:intergenic | 20.0% |
| ! | ATATAAGAAAACTGAAGGTA+AGG | - | chr4.3:27900407-27900426 | None:intergenic | 25.0% |
| ! | TAATTCCAGAAAAACAAAGA+GGG | - | chr4.3:27901375-27901394 | None:intergenic | 25.0% |
| ! | TTAATTCCAGAAAAACAAAG+AGG | - | chr4.3:27901376-27901395 | None:intergenic | 25.0% |
| !! | GTAGAATTGTTGATTGAATT+TGG | - | chr4.3:27900480-27900499 | None:intergenic | 25.0% |
| !! | TTGCTTAGATTTTGTGATTA+TGG | + | chr4.3:27900841-27900860 | MS.gene56438:intron | 25.0% |
| TAACGAATTAGAACAAGTTC+TGG | + | chr4.3:27901138-27901157 | MS.gene56438:CDS | 30.0% | |
| TGAATTTGGTTATATCTCTG+TGG | - | chr4.3:27900466-27900485 | None:intergenic | 30.0% | |
| TGATTATGGAGAATCAGATT+TGG | + | chr4.3:27901071-27901090 | MS.gene56438:CDS | 30.0% | |
| ! | AAAAGCGAAAACACTGATTA+TGG | + | chr4.3:27901057-27901076 | MS.gene56438:CDS | 30.0% |
| ! | GAGAGTTTGATATTTTTCTG+AGG | - | chr4.3:27900683-27900702 | None:intergenic | 30.0% |
| !! | TTGATATTTTTCTGAGGAAG+AGG | - | chr4.3:27900677-27900696 | None:intergenic | 30.0% |
| !!! | CGATTTCAGATTGTTGATTT+TGG | - | chr4.3:27900748-27900767 | None:intergenic | 30.0% |
| AGAAGAAGAGATTCAGAGAA+TGG | + | chr4.3:27901009-27901028 | MS.gene56438:CDS | 35.0% | |
| AGATTCTGATCAACAAAGGA+AGG | - | chr4.3:27900713-27900732 | None:intergenic | 35.0% | |
| ATATCTCTGTGGAAAAACAG+AGG | - | chr4.3:27900455-27900474 | None:intergenic | 35.0% | |
| GAAAAGGAAAGAACGATTCA+GGG | - | chr4.3:27900550-27900569 | None:intergenic | 35.0% | |
| GAATCAGATTTGGAGAGAAA+TGG | + | chr4.3:27901081-27901100 | MS.gene56438:CDS | 35.0% | |
| GAGAAGAAATTCATATGAGG+AGG | - | chr4.3:27900334-27900353 | None:intergenic | 35.0% | |
| GGAGAGAAGAAATTCATATG+AGG | - | chr4.3:27900337-27900356 | None:intergenic | 35.0% | |
| GTTTCTTTGTTACTGCTTCT+TGG | - | chr4.3:27900979-27900998 | None:intergenic | 35.0% | |
| TGAAAAGGAAAGAACGATTC+AGG | - | chr4.3:27900551-27900570 | None:intergenic | 35.0% | |
| TGAAACGCTTTCTTGAATCA+GGG | - | chr4.3:27900625-27900644 | None:intergenic | 35.0% | |
| TGTGTTTGTGTACAATGTGT+GGG | + | chr4.3:27901332-27901351 | MS.gene56438:CDS | 35.0% | |
| TTCTACAATGCTTCCATGAA+TGG | + | chr4.3:27900494-27900513 | MS.gene56438:CDS | 35.0% | |
| TTGTGTTTGTGTACAATGTG+TGG | + | chr4.3:27901331-27901350 | MS.gene56438:CDS | 35.0% | |
| ! | AAGAGTGTATGATTCTTCAG+TGG | - | chr4.3:27900654-27900673 | None:intergenic | 35.0% |
| !! | CAGAAAGATGGTTGATGAAA+AGG | - | chr4.3:27900566-27900585 | None:intergenic | 35.0% |
| !! | GTTGATTTTGGAGATGATAG+AGG | - | chr4.3:27900736-27900755 | None:intergenic | 35.0% |
| !!! | AATTGCCCTCTTTGTTTTTC+TGG | + | chr4.3:27901367-27901386 | MS.gene56438:CDS | 35.0% |
| AAAGAGGGCAATTACGAATG+TGG | - | chr4.3:27901360-27901379 | None:intergenic | 40.0% | |
| AAGAGGGCAATTACGAATGT+GGG | - | chr4.3:27901359-27901378 | None:intergenic | 40.0% | |
| CACAAACACAAATGCCTACA+TGG | - | chr4.3:27901322-27901341 | None:intergenic | 40.0% | |
| CACAGTCACAAATCAATCAC+AGG | + | chr4.3:27900356-27900375 | MS.gene56438:CDS | 40.0% | |
| CATGTGAATAGCACCATTCA+TGG | - | chr4.3:27900510-27900529 | None:intergenic | 40.0% | |
| CTGAAACGCTTTCTTGAATC+AGG | - | chr4.3:27900626-27900645 | None:intergenic | 40.0% | |
| GAGGAGATTCTGATCAACAA+AGG | - | chr4.3:27900717-27900736 | None:intergenic | 40.0% | |
| GCAATCAAGAATGCTACAAG+CGG | + | chr4.3:27900949-27900968 | MS.gene56438:CDS | 40.0% | |
| TCAGGGATTGTTGAAGACAT+AGG | - | chr4.3:27900533-27900552 | None:intergenic | 40.0% | |
| TCTTGAATCAGGGATGTGAT+AGG | - | chr4.3:27900615-27900634 | None:intergenic | 40.0% | |
| ! | GTGACAGTACTATCAGCTTT+TGG | - | chr4.3:27900593-27900612 | None:intergenic | 40.0% |
| ! | TAGTGCTGTTATTGCCATGT+AGG | + | chr4.3:27901305-27901324 | MS.gene56438:CDS | 40.0% |
| !! | CTGTGATTGATTTGTGACTG+TGG | - | chr4.3:27900358-27900377 | None:intergenic | 40.0% |
| !!! | GCTTTTGGTTCACAGAAAGA+TGG | - | chr4.3:27900578-27900597 | None:intergenic | 40.0% |
| ACAGACAGAGAGAGTGAGAA+TGG | + | chr4.3:27900904-27900923 | MS.gene56438:intron | 45.0% | |
| ACGCTGCATCTTCATCGTTA+CGG | - | chr4.3:27901180-27901199 | None:intergenic | 45.0% | |
| AAGTAACCACCACGTGAAGG+AGG | + | chr4.3:27901210-27901229 | MS.gene56438:CDS | 50.0% | |
| GAAATTGTGCAGCGGTTGTG+GGG | + | chr4.3:27901270-27901289 | MS.gene56438:CDS | 50.0% | |
| GGAAATTGTGCAGCGGTTGT+GGG | + | chr4.3:27901269-27901288 | MS.gene56438:CDS | 50.0% | |
| GTGGTTGGGAAATTGTGCAG+CGG | + | chr4.3:27901262-27901281 | MS.gene56438:CDS | 50.0% | |
| TGGAAGTAACCACCACGTGA+AGG | + | chr4.3:27901207-27901226 | MS.gene56438:CDS | 50.0% | |
| GGGAAATTGTGCAGCGGTTG+TGG | + | chr4.3:27901268-27901287 | MS.gene56438:CDS | 55.0% | |
| TAACCACCACGTGAAGGAGG+AGG | + | chr4.3:27901213-27901232 | MS.gene56438:CDS | 55.0% | |
| ! | GAAGATGCAGCGTCGAGTTG+TGG | + | chr4.3:27901187-27901206 | MS.gene56438:CDS | 55.0% |
| GTGCAGCGGTTGTGGGGTAA+GGG | + | chr4.3:27901276-27901295 | MS.gene56438:CDS | 60.0% | |
| TGTGCAGCGGTTGTGGGGTA+AGG | + | chr4.3:27901275-27901294 | MS.gene56438:CDS | 60.0% | |
| !! | GGTGGTGGAAGAAGCGTCGT+CGG | + | chr4.3:27901237-27901256 | MS.gene56438:CDS | 60.0% |
| CCACCACCTCCTCCTTCACG+TGG | - | chr4.3:27901222-27901241 | None:intergenic | 65.0% | |
| CCACCACGTGAAGGAGGAGG+TGG | + | chr4.3:27901216-27901235 | MS.gene56438:CDS | 65.0% | |
| CCACCTCCTCCTTCACGTGG+TGG | - | chr4.3:27901219-27901238 | None:intergenic | 65.0% | |
| CCACGTGAAGGAGGAGGTGG+TGG | + | chr4.3:27901219-27901238 | MS.gene56438:CDS | 65.0% | |
| ! | AAGCGTCGTCGGCGGTGGTT+GGG | + | chr4.3:27901248-27901267 | MS.gene56438:CDS | 65.0% |
| ! | CGTGAAGGAGGAGGTGGTGG+TGG | + | chr4.3:27901222-27901241 | MS.gene56438:CDS | 65.0% |
| !! | GGTGGAAGAAGCGTCGTCGG+CGG | + | chr4.3:27901240-27901259 | MS.gene56438:CDS | 65.0% |
| !! | GAAGCGTCGTCGGCGGTGGT+TGG | + | chr4.3:27901247-27901266 | MS.gene56438:CDS | 70.0% |
| !! | GGAAGAAGCGTCGTCGGCGG+TGG | + | chr4.3:27901243-27901262 | MS.gene56438:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.3 | gene | 27900319 | 27901423 | 27900319 | ID=MS.gene56438 |
| chr4.3 | mRNA | 27900319 | 27901423 | 27900319 | ID=MS.gene56438.t1;Parent=MS.gene56438 |
| chr4.3 | exon | 27900319 | 27900377 | 27900319 | ID=MS.gene56438.t1.exon1;Parent=MS.gene56438.t1 |
| chr4.3 | CDS | 27900319 | 27900377 | 27900319 | ID=cds.MS.gene56438.t1;Parent=MS.gene56438.t1 |
| chr4.3 | exon | 27900469 | 27900787 | 27900469 | ID=MS.gene56438.t1.exon2;Parent=MS.gene56438.t1 |
| chr4.3 | CDS | 27900469 | 27900787 | 27900469 | ID=cds.MS.gene56438.t1;Parent=MS.gene56438.t1 |
| chr4.3 | exon | 27900908 | 27901423 | 27900908 | ID=MS.gene56438.t1.exon3;Parent=MS.gene56438.t1 |
| chr4.3 | CDS | 27900908 | 27901423 | 27900908 | ID=cds.MS.gene56438.t1;Parent=MS.gene56438.t1 |
| Gene Sequence |
| Protein sequence |
