Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene003532.t1 | XP_013456473.1 | 99.6 | 223 | 1 | 0 | 1 | 223 | 1 | 223 | 2.90E-121 | 444.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene003532.t1 | O49605 | 78.5 | 223 | 47 | 1 | 1 | 222 | 1 | 223 | 1.2e-99 | 364.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene003532.t1 | I3S543 | 99.6 | 223 | 1 | 0 | 1 | 223 | 1 | 223 | 2.1e-121 | 444.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene04515 | MS.gene003532 | PPI |
| MS.gene048458 | MS.gene003532 | PPI |
| MS.gene04526 | MS.gene003532 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene003532.t1 | MTR_4g073650 | 99.552 | 223 | 1 | 0 | 1 | 223 | 1 | 223 | 3.13e-164 | 452 |
| MS.gene003532.t1 | MTR_3g463900 | 60.541 | 185 | 72 | 1 | 31 | 215 | 19 | 202 | 2.63e-79 | 236 |
| MS.gene003532.t1 | MTR_3g070500 | 58.791 | 182 | 73 | 2 | 34 | 214 | 51 | 231 | 4.84e-73 | 221 |
| MS.gene003532.t1 | MTR_7g116340 | 55.357 | 168 | 74 | 1 | 47 | 214 | 5 | 171 | 1.20e-62 | 193 |
| MS.gene003532.t1 | MTR_4g075290 | 53.216 | 171 | 79 | 1 | 44 | 214 | 2 | 171 | 9.71e-61 | 188 |
| MS.gene003532.t1 | MTR_1g085560 | 53.977 | 176 | 73 | 2 | 41 | 215 | 80 | 248 | 1.08e-60 | 191 |
| MS.gene003532.t1 | MTR_4g086760 | 56.000 | 175 | 76 | 1 | 47 | 220 | 5 | 179 | 3.87e-60 | 191 |
| MS.gene003532.t1 | MTR_3g117750 | 54.762 | 168 | 75 | 1 | 47 | 214 | 13 | 179 | 4.84e-60 | 187 |
| MS.gene003532.t1 | MTR_4g086760 | 56.000 | 175 | 76 | 1 | 47 | 220 | 5 | 179 | 5.58e-60 | 191 |
| MS.gene003532.t1 | MTR_4g086760 | 56.000 | 175 | 76 | 1 | 47 | 220 | 5 | 179 | 9.22e-60 | 192 |
| MS.gene003532.t1 | MTR_8g079690 | 57.396 | 169 | 71 | 1 | 47 | 214 | 5 | 173 | 1.00e-59 | 192 |
| MS.gene003532.t1 | MTR_1g117010 | 49.485 | 194 | 88 | 2 | 25 | 215 | 56 | 242 | 2.44e-59 | 187 |
| MS.gene003532.t1 | MTR_1g117010 | 49.485 | 194 | 88 | 2 | 25 | 215 | 56 | 242 | 2.44e-59 | 187 |
| MS.gene003532.t1 | MTR_7g110980 | 48.128 | 187 | 90 | 1 | 29 | 215 | 79 | 258 | 4.51e-59 | 187 |
| MS.gene003532.t1 | MTR_7g095750 | 55.814 | 172 | 74 | 2 | 48 | 218 | 9 | 179 | 1.64e-56 | 190 |
| MS.gene003532.t1 | MTR_3g070500 | 58.696 | 138 | 56 | 1 | 34 | 170 | 51 | 188 | 2.66e-55 | 175 |
| MS.gene003532.t1 | MTR_8g040180 | 47.619 | 168 | 85 | 2 | 48 | 214 | 20 | 185 | 1.30e-48 | 157 |
| MS.gene003532.t1 | MTR_3g070500 | 53.913 | 115 | 52 | 1 | 34 | 147 | 51 | 165 | 1.18e-39 | 134 |
| MS.gene003532.t1 | MTR_3g070500 | 55.455 | 110 | 48 | 1 | 34 | 142 | 51 | 160 | 1.49e-39 | 134 |
| MS.gene003532.t1 | MTR_3g107660 | 46.707 | 167 | 87 | 2 | 48 | 213 | 12 | 177 | 3.16e-39 | 144 |
| MS.gene003532.t1 | MTR_1g011980 | 47.904 | 167 | 84 | 3 | 48 | 213 | 9 | 173 | 1.05e-38 | 142 |
| MS.gene003532.t1 | MTR_2g085075 | 42.500 | 160 | 79 | 4 | 59 | 217 | 470 | 617 | 2.01e-31 | 120 |
| MS.gene003532.t1 | MTR_8g036015 | 44.853 | 136 | 63 | 4 | 58 | 192 | 8 | 132 | 2.45e-27 | 102 |
| MS.gene003532.t1 | MTR_7g105220 | 40.458 | 131 | 66 | 3 | 59 | 188 | 18 | 137 | 7.60e-27 | 101 |
| MS.gene003532.t1 | MTR_5g015500 | 42.000 | 150 | 75 | 4 | 60 | 208 | 314 | 452 | 3.46e-25 | 103 |
| MS.gene003532.t1 | MTR_2g023120 | 45.522 | 134 | 58 | 5 | 60 | 191 | 22 | 142 | 3.81e-25 | 102 |
| MS.gene003532.t1 | MTR_5g015500 | 42.000 | 150 | 75 | 4 | 60 | 208 | 354 | 492 | 4.76e-25 | 102 |
| MS.gene003532.t1 | MTR_3g085705 | 40.678 | 118 | 58 | 2 | 85 | 202 | 20 | 125 | 4.06e-21 | 85.5 |
| MS.gene003532.t1 | MTR_6g084140 | 34.591 | 159 | 84 | 5 | 59 | 208 | 9 | 156 | 1.14e-18 | 84.3 |
| MS.gene003532.t1 | MTR_6g084140 | 34.591 | 159 | 84 | 5 | 59 | 208 | 26 | 173 | 1.21e-18 | 84.3 |
| MS.gene003532.t1 | MTR_8g442420 | 33.962 | 159 | 85 | 5 | 59 | 208 | 9 | 156 | 1.43e-17 | 81.3 |
| MS.gene003532.t1 | MTR_2g461260 | 27.143 | 210 | 94 | 8 | 41 | 206 | 53 | 247 | 1.46e-13 | 68.6 |
| MS.gene003532.t1 | MTR_1g035360 | 29.108 | 213 | 110 | 7 | 18 | 210 | 32 | 223 | 4.95e-12 | 63.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene003532.t1 | AT4G34960 | 78.475 | 223 | 47 | 1 | 1 | 222 | 1 | 223 | 4.59e-124 | 350 |
| MS.gene003532.t1 | AT4G34960 | 75.439 | 171 | 41 | 1 | 1 | 170 | 1 | 171 | 1.65e-87 | 256 |
| MS.gene003532.t1 | AT2G29960 | 59.799 | 199 | 76 | 2 | 17 | 215 | 6 | 200 | 3.44e-81 | 241 |
| MS.gene003532.t1 | AT2G29960 | 59.799 | 199 | 76 | 2 | 17 | 215 | 6 | 200 | 3.44e-81 | 241 |
| MS.gene003532.t1 | AT5G58710 | 60.440 | 182 | 71 | 1 | 34 | 215 | 23 | 203 | 1.02e-77 | 232 |
| MS.gene003532.t1 | AT2G29960 | 56.784 | 199 | 72 | 3 | 17 | 215 | 6 | 190 | 1.76e-74 | 224 |
| MS.gene003532.t1 | AT3G55920 | 52.074 | 217 | 87 | 3 | 14 | 214 | 11 | 226 | 5.66e-71 | 216 |
| MS.gene003532.t1 | AT5G13120 | 52.821 | 195 | 82 | 2 | 27 | 218 | 67 | 254 | 1.19e-66 | 206 |
| MS.gene003532.t1 | AT5G13120 | 52.821 | 195 | 82 | 2 | 27 | 218 | 71 | 258 | 1.67e-66 | 206 |
| MS.gene003532.t1 | AT3G56070 | 55.952 | 168 | 73 | 1 | 47 | 214 | 5 | 171 | 4.85e-64 | 197 |
| MS.gene003532.t1 | AT3G56070 | 55.952 | 168 | 73 | 1 | 47 | 214 | 5 | 171 | 4.85e-64 | 197 |
| MS.gene003532.t1 | AT4G38740 | 55.952 | 168 | 73 | 1 | 47 | 214 | 5 | 171 | 6.12e-64 | 196 |
| MS.gene003532.t1 | AT2G21130 | 57.738 | 168 | 70 | 1 | 47 | 214 | 6 | 172 | 2.72e-63 | 195 |
| MS.gene003532.t1 | AT4G34870 | 55.357 | 168 | 74 | 1 | 47 | 214 | 5 | 171 | 8.29e-62 | 191 |
| MS.gene003532.t1 | AT2G15790 | 57.895 | 171 | 71 | 1 | 47 | 216 | 5 | 175 | 2.02e-61 | 196 |
| MS.gene003532.t1 | AT3G62030 | 50.829 | 181 | 82 | 1 | 35 | 215 | 83 | 256 | 8.20e-61 | 191 |
| MS.gene003532.t1 | AT3G62030 | 50.829 | 181 | 82 | 1 | 35 | 215 | 84 | 257 | 8.63e-61 | 191 |
| MS.gene003532.t1 | AT3G62030 | 50.829 | 181 | 82 | 1 | 35 | 215 | 137 | 310 | 3.18e-60 | 191 |
| MS.gene003532.t1 | AT2G16600 | 52.976 | 168 | 78 | 1 | 47 | 214 | 6 | 172 | 1.06e-58 | 183 |
| MS.gene003532.t1 | AT3G63400 | 55.357 | 168 | 73 | 2 | 48 | 214 | 9 | 175 | 1.28e-54 | 179 |
| MS.gene003532.t1 | AT3G63400 | 55.357 | 168 | 73 | 2 | 48 | 214 | 9 | 175 | 7.90e-53 | 179 |
| MS.gene003532.t1 | AT3G63400 | 55.357 | 168 | 73 | 2 | 48 | 214 | 9 | 175 | 7.90e-53 | 179 |
| MS.gene003532.t1 | AT3G63400 | 55.357 | 168 | 73 | 2 | 48 | 214 | 9 | 175 | 7.90e-53 | 179 |
| MS.gene003532.t1 | AT2G38730 | 45.833 | 168 | 88 | 2 | 48 | 214 | 34 | 199 | 1.72e-45 | 150 |
| MS.gene003532.t1 | AT2G16600 | 45.833 | 168 | 68 | 2 | 47 | 214 | 6 | 150 | 1.37e-43 | 144 |
| MS.gene003532.t1 | AT4G32420 | 47.305 | 167 | 86 | 2 | 48 | 213 | 9 | 174 | 8.56e-39 | 142 |
| MS.gene003532.t1 | AT4G32420 | 47.305 | 167 | 86 | 2 | 48 | 213 | 9 | 174 | 8.56e-39 | 142 |
| MS.gene003532.t1 | AT4G32420 | 47.305 | 167 | 86 | 2 | 48 | 213 | 9 | 174 | 8.56e-39 | 142 |
| MS.gene003532.t1 | AT4G32420 | 47.305 | 167 | 86 | 2 | 48 | 213 | 9 | 174 | 8.56e-39 | 142 |
| MS.gene003532.t1 | AT4G32420 | 48.630 | 146 | 74 | 1 | 48 | 192 | 9 | 154 | 1.18e-37 | 139 |
| MS.gene003532.t1 | AT3G22920 | 43.860 | 171 | 85 | 5 | 47 | 214 | 5 | 167 | 2.16e-35 | 125 |
| MS.gene003532.t1 | AT3G44600 | 42.500 | 160 | 79 | 4 | 59 | 217 | 484 | 631 | 8.07e-31 | 119 |
| MS.gene003532.t1 | AT1G01940 | 45.588 | 136 | 62 | 4 | 58 | 192 | 8 | 132 | 3.70e-28 | 104 |
| MS.gene003532.t1 | AT2G36130 | 41.221 | 131 | 65 | 3 | 59 | 188 | 18 | 137 | 9.18e-28 | 103 |
| MS.gene003532.t1 | AT4G33060 | 45.600 | 125 | 55 | 4 | 60 | 182 | 22 | 135 | 2.98e-27 | 108 |
| MS.gene003532.t1 | AT5G67530 | 42.484 | 153 | 76 | 4 | 60 | 211 | 353 | 494 | 1.90e-26 | 107 |
| MS.gene003532.t1 | AT1G53720 | 33.962 | 159 | 85 | 5 | 59 | 208 | 9 | 156 | 7.81e-18 | 81.3 |
| MS.gene003532.t1 | AT1G53720 | 34.591 | 159 | 84 | 6 | 59 | 208 | 9 | 156 | 3.00e-17 | 80.1 |
| MS.gene003532.t1 | AT5G35100 | 30.366 | 191 | 81 | 6 | 44 | 192 | 50 | 230 | 1.98e-12 | 65.5 |
| MS.gene003532.t1 | AT5G35100 | 30.366 | 191 | 81 | 6 | 44 | 192 | 50 | 230 | 1.98e-12 | 65.5 |
Find 49 sgRNAs with CRISPR-Local
Find 219 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TATTTACGGTGGCACCTTTC+CGG | 0.188799 | 4.1:+30148582 | MS.gene003532:CDS |
| CCTTTCCGGACGAGAATTTC+AGG | 0.192361 | 4.1:+30148596 | MS.gene003532:CDS |
| CGCATTCTCTGCTTCTAAAT+TGG | 0.208778 | 4.1:+30146038 | MS.gene003532:CDS |
| CGTTGTCTCTATGGCTAATT+CGG | 0.268263 | 4.1:+30148779 | MS.gene003532:CDS |
| CCATTTCATCGGATAGTATC+TGG | 0.290312 | 4.1:+30148505 | MS.gene003532:CDS |
| AAAACTCTATGTGTAATTTC+AGG | 0.328445 | 4.1:-30147754 | None:intergenic |
| CTTCCTCGGTTTCCCACTAT+AGG | 0.329905 | 4.1:-30149097 | None:intergenic |
| GGTTGCAGGCGTTGTCTCTA+TGG | 0.339111 | 4.1:+30148770 | MS.gene003532:intron |
| GATATTGATAAACAGCGTTT+AGG | 0.342954 | 4.1:+30147787 | MS.gene003532:CDS |
| AGGATCGTGATTGGATTATA+TGG | 0.372648 | 4.1:+30148017 | MS.gene003532:CDS |
| TCCTCGTCCCACTTGCTCTT+CGG | 0.389846 | 4.1:-30149150 | None:intergenic |
| AACTGTGAACCATTGGAATC+AGG | 0.397478 | 4.1:-30148804 | None:intergenic |
| AAAGCATCTGAATCTATTTA+CGG | 0.399116 | 4.1:+30148568 | MS.gene003532:CDS |
| CCAGATACTATCCGATGAAA+TGG | 0.402366 | 4.1:-30148505 | None:intergenic |
| TACAAATTTGATAGGTTGGA+TGG | 0.436162 | 4.1:+30149003 | MS.gene003532:intron |
| GGTGTAAAGCTTCATTATAA+AGG | 0.446051 | 4.1:+30148478 | MS.gene003532:CDS |
| TCTGCAGGTAGGATCGTGAT+TGG | 0.453737 | 4.1:+30148008 | MS.gene003532:intron |
| AGAGAACAAGGAGGAGAATG+AGG | 0.453892 | 4.1:-30145999 | None:intergenic |
| GTTGTCTCTATGGCTAATTC+GGG | 0.473379 | 4.1:+30148780 | MS.gene003532:CDS |
| AAGGTAGTGATTGCGGACTC+TGG | 0.481336 | 4.1:+30149120 | MS.gene003532:CDS |
| AGGATTAAACATTCTCATGC+TGG | 0.482834 | 4.1:+30148616 | MS.gene003532:CDS |
| CCATAATGTGTAGGTGAGAA+AGG | 0.491973 | 4.1:+30148442 | MS.gene003532:intron |
| TTAATCCTGAAATTCTCGTC+CGG | 0.506818 | 4.1:-30148601 | None:intergenic |
| GCAATCACTACCTTCTTCCT+CGG | 0.508012 | 4.1:-30149111 | None:intergenic |
| GATACCGTATTTGCAATTGA+AGG | 0.526063 | 4.1:+30149063 | MS.gene003532:CDS |
| TGGCAAGGTTGTTCAAGGCA+TGG | 0.547061 | 4.1:+30149041 | MS.gene003532:CDS |
| ATACCGTATTTGCAATTGAA+GGG | 0.553217 | 4.1:+30149064 | MS.gene003532:CDS |
| TAATGAAAATTGAGAGAACA+AGG | 0.563578 | 4.1:-30146011 | None:intergenic |
| GAGAGATACCGAAGAGCAAG+TGG | 0.564077 | 4.1:+30149142 | MS.gene003532:CDS |
| ATAAAGGAACACCATTTCAT+CGG | 0.570046 | 4.1:+30148494 | MS.gene003532:CDS |
| GGAGATATTGTTCATCGTGA+TGG | 0.573728 | 4.1:+30148544 | MS.gene003532:CDS |
| ACCGAAGAGCAAGTGGGACG+AGG | 0.574878 | 4.1:+30149149 | MS.gene003532:CDS |
| TACCGTATTTGCAATTGAAG+GGG | 0.577885 | 4.1:+30149065 | MS.gene003532:CDS |
| TAGTGGGAAACCGAGGAAGA+AGG | 0.584123 | 4.1:+30149101 | MS.gene003532:CDS |
| CCTGAAATTCTCGTCCGGAA+AGG | 0.592748 | 4.1:-30148596 | None:intergenic |
| GGGGAGCTGGAACCTATAGT+GGG | 0.603118 | 4.1:+30149085 | MS.gene003532:CDS |
| AATTCGGGACCTGATTCCAA+TGG | 0.603199 | 4.1:+30148795 | MS.gene003532:CDS |
| GGCCGATGAGAAAACAGAAG+AGG | 0.613799 | 4.1:+30147729 | MS.gene003532:intron |
| TTACCACAGTGAAGGCCAGT+TGG | 0.614315 | 4.1:+30148832 | MS.gene003532:CDS |
| GAGAAAGGCGAGAGTGCAAG+CGG | 0.619711 | 4.1:+30148457 | MS.gene003532:CDS |
| GAGGAAGAAGGTAGTGATTG+CGG | 0.640776 | 4.1:+30149113 | MS.gene003532:CDS |
| AGGAGGAGAATGAGGAATCG+AGG | 0.641912 | 4.1:-30145991 | None:intergenic |
| ACCGTATTTGCAATTGAAGG+GGG | 0.647013 | 4.1:+30149066 | MS.gene003532:CDS |
| TGAAAATTGAGAGAACAAGG+AGG | 0.658859 | 4.1:-30146008 | None:intergenic |
| GAACCTATAGTGGGAAACCG+AGG | 0.686763 | 4.1:+30149094 | MS.gene003532:CDS |
| AGAGATACCGAAGAGCAAGT+GGG | 0.699903 | 4.1:+30149143 | MS.gene003532:CDS |
| GATTGGATTATATGGCCAAG+TGG | 0.703755 | 4.1:+30148025 | MS.gene003532:CDS |
| TTACCAACTGGCCTTCACTG+TGG | 0.710194 | 4.1:-30148835 | None:intergenic |
| GCATCTGAATCTATTTACGG+TGG | 0.715780 | 4.1:+30148571 | MS.gene003532:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAACCAAATATAAATAATTT+TGG | + | chr4.1:30147405-30147424 | MS.gene003532:intron | 10.0% |
| !! | AATTTCATTACAAATTTGAT+AGG | + | chr4.1:30148995-30149014 | MS.gene003532:intron | 15.0% |
| !! | TATTAATAGTAAAAAGGAAA+AGG | - | chr4.1:30147968-30147987 | None:intergenic | 15.0% |
| !!! | AGTTTTTTATATTCTCATTA+AGG | + | chr4.1:30146405-30146424 | MS.gene003532:intron | 15.0% |
| !!! | GATATATTGATAATAGTTTA+AGG | + | chr4.1:30147107-30147126 | MS.gene003532:intron | 15.0% |
| !!! | TTTAAGCATTTTGTTTTATT+CGG | + | chr4.1:30148659-30148678 | MS.gene003532:intron | 15.0% |
| !!! | TTTCCTTTTTACTATTAATA+AGG | + | chr4.1:30147968-30147987 | MS.gene003532:intron | 15.0% |
| !! | AAAAGAACCTTACTTATATT+AGG | - | chr4.1:30147540-30147559 | None:intergenic | 20.0% |
| !! | ACACCTTATTAATAGTAAAA+AGG | - | chr4.1:30147974-30147993 | None:intergenic | 20.0% |
| !! | ACTGCAATATATATAGAAAA+GGG | - | chr4.1:30146077-30146096 | None:intergenic | 20.0% |
| !! | CTCAAAAATGACAAAAAAAA+AGG | - | chr4.1:30148711-30148730 | None:intergenic | 20.0% |
| !! | GCTCCAAAATTATTTATATT+TGG | - | chr4.1:30147411-30147430 | None:intergenic | 20.0% |
| !! | TAAGAAAATCAATGTTTGAT+AGG | + | chr4.1:30148148-30148167 | MS.gene003532:intron | 20.0% |
| !! | TAATGAATTCAAACTTACAA+CGG | + | chr4.1:30146463-30146482 | MS.gene003532:intron | 20.0% |
| !!! | ATAGTGTATTTCATTTTGAA+AGG | - | chr4.1:30148262-30148281 | None:intergenic | 20.0% |
| !!! | CTTTTTTTTTGTCATTTTTG+AGG | + | chr4.1:30148709-30148728 | MS.gene003532:intron | 20.0% |
| !!! | TTCAGACTCTTATTTATATA+TGG | + | chr4.1:30147382-30147401 | MS.gene003532:intron | 20.0% |
| !!! | TTTTATATTCTCATTAAGGT+GGG | + | chr4.1:30146409-30146428 | MS.gene003532:intron | 20.0% |
| !!! | TTTTTACTATTAATAAGGTG+TGG | + | chr4.1:30147973-30147992 | MS.gene003532:intron | 20.0% |
| !!! | TTTTTATATTCTCATTAAGG+TGG | + | chr4.1:30146408-30146427 | MS.gene003532:intron | 20.0% |
| !!! | TTTTTGTTTCTTCTATTGTA+AGG | - | chr4.1:30148114-30148133 | None:intergenic | 20.0% |
| ! | AAAACTCTATGTGTAATTTC+AGG | - | chr4.1:30147757-30147776 | None:intergenic | 25.0% |
| ! | AAAGTGATGAAGTAAGATAA+AGG | + | chr4.1:30146969-30146988 | MS.gene003532:intron | 25.0% |
| ! | AACTAAGAAAATGTATTGGA+GGG | + | chr4.1:30146712-30146731 | MS.gene003532:intron | 25.0% |
| ! | AATCACAGTTTCAACATTTA+AGG | - | chr4.1:30146630-30146649 | None:intergenic | 25.0% |
| ! | ACATACGTAGTAAGTTAAAT+TGG | - | chr4.1:30147875-30147894 | None:intergenic | 25.0% |
| ! | ATATAAATTTATCCCCCATT+TGG | + | chr4.1:30148396-30148415 | MS.gene003532:intron | 25.0% |
| ! | ATATATAGAAAAGGGTCATA+AGG | - | chr4.1:30146069-30146088 | None:intergenic | 25.0% |
| ! | CTTATCTGATTGGAAATTTA+TGG | + | chr4.1:30147610-30147629 | MS.gene003532:intron | 25.0% |
| ! | GACTGCAATATATATAGAAA+AGG | - | chr4.1:30146078-30146097 | None:intergenic | 25.0% |
| ! | TAACTAAGAAAATGTATTGG+AGG | + | chr4.1:30146711-30146730 | MS.gene003532:intron | 25.0% |
| ! | TAATGAAAATTGAGAGAACA+AGG | - | chr4.1:30146014-30146033 | None:intergenic | 25.0% |
| ! | TATATAGAAAAGGGTCATAA+GGG | - | chr4.1:30146068-30146087 | None:intergenic | 25.0% |
| ! | TATATATATTGCAGTCATTG+TGG | + | chr4.1:30146082-30146101 | MS.gene003532:intron | 25.0% |
| ! | TCATTACAAATTTGATAGGT+TGG | + | chr4.1:30148999-30149018 | MS.gene003532:intron | 25.0% |
| ! | TTAATATGGAAATCAAAGGT+GGG | - | chr4.1:30147656-30147675 | None:intergenic | 25.0% |
| ! | TTCGAGTGTTAAAATATAGT+GGG | - | chr4.1:30147566-30147585 | None:intergenic | 25.0% |
| ! | TTGCAGTTTCATAAGATAAT+AGG | - | chr4.1:30148286-30148305 | None:intergenic | 25.0% |
| !! | AAAGCATCTGAATCTATTTA+CGG | + | chr4.1:30148568-30148587 | MS.gene003532:CDS | 25.0% |
| !! | AAGATTTAAACTTGCTTCTT+TGG | + | chr4.1:30147454-30147473 | MS.gene003532:intron | 25.0% |
| !! | AATTACACATAGAGTTTTCT+TGG | + | chr4.1:30147759-30147778 | MS.gene003532:CDS | 25.0% |
| !! | TACGTATGTTTGTTAGAAAA+AGG | + | chr4.1:30147886-30147905 | MS.gene003532:intron | 25.0% |
| !! | TGTTTGTTAGAAAAAGGATT+AGG | + | chr4.1:30147892-30147911 | MS.gene003532:intron | 25.0% |
| !!! | TATTGTTGTTGATTTGATGA+TGG | + | chr4.1:30146196-30146215 | MS.gene003532:intron | 25.0% |
| AAAGAAAAACTGTGAACCAT+TGG | - | chr4.1:30148814-30148833 | None:intergenic | 30.0% | |
| AATACAGAATCTCCCTAATT+TGG | + | chr4.1:30146686-30146705 | MS.gene003532:intron | 30.0% | |
| AATCACTGTCTTAAATAAGG+TGG | + | chr4.1:30146836-30146855 | MS.gene003532:intron | 30.0% | |
| AATCGTTTCCAGCTTATTAT+GGG | + | chr4.1:30147326-30147345 | MS.gene003532:intron | 30.0% | |
| ACTAAGAAAATGTATTGGAG+GGG | + | chr4.1:30146713-30146732 | MS.gene003532:intron | 30.0% | |
| AGGTGGGAAAAAATAAAAGA+TGG | - | chr4.1:30147640-30147659 | None:intergenic | 30.0% | |
| ATAAAGGAACACCATTTCAT+CGG | + | chr4.1:30148494-30148513 | MS.gene003532:CDS | 30.0% | |
| ATACAGAATCTCCCTAATTT+GGG | + | chr4.1:30146687-30146706 | MS.gene003532:intron | 30.0% | |
| ATACCGTATTTGCAATTGAA+GGG | + | chr4.1:30149064-30149083 | MS.gene003532:CDS | 30.0% | |
| ATCACTGTCTTAAATAAGGT+GGG | + | chr4.1:30146837-30146856 | MS.gene003532:intron | 30.0% | |
| ATTAGTGTTCCATAATGTGT+AGG | + | chr4.1:30148433-30148452 | MS.gene003532:intron | 30.0% | |
| CAAATTAGGAAAGAGAATGA+TGG | - | chr4.1:30147065-30147084 | None:intergenic | 30.0% | |
| CACAATCACTGTCTTAAATA+AGG | + | chr4.1:30146833-30146852 | MS.gene003532:intron | 30.0% | |
| CAGGTTAATATGGAAATCAA+AGG | - | chr4.1:30147660-30147679 | None:intergenic | 30.0% | |
| CCACATTCCTAATATAAGTA+AGG | + | chr4.1:30147530-30147549 | MS.gene003532:intron | 30.0% | |
| CCTAATTTGAAAGTAGTTGA+AGG | + | chr4.1:30147076-30147095 | MS.gene003532:intron | 30.0% | |
| CCTTACTTATATTAGGAATG+TGG | - | chr4.1:30147533-30147552 | None:intergenic | 30.0% | |
| CCTTCAACTACTTTCAAATT+AGG | - | chr4.1:30147079-30147098 | None:intergenic | 30.0% | |
| CTTACAGAATCATAATGCAA+GGG | - | chr4.1:30146266-30146285 | None:intergenic | 30.0% | |
| CTTCGAGTGTTAAAATATAG+TGG | - | chr4.1:30147567-30147586 | None:intergenic | 30.0% | |
| GAACACTAATAATTAGTGCA+TGG | - | chr4.1:30148423-30148442 | None:intergenic | 30.0% | |
| GATAACATGAATAGTGATGA+TGG | - | chr4.1:30148975-30148994 | None:intergenic | 30.0% | |
| GATATTGATAAACAGCGTTT+AGG | + | chr4.1:30147787-30147806 | MS.gene003532:CDS | 30.0% | |
| GGGTAACTAAGAAAATGTAT+TGG | + | chr4.1:30146708-30146727 | MS.gene003532:intron | 30.0% | |
| GGTGTAAAGCTTCATTATAA+AGG | + | chr4.1:30148478-30148497 | MS.gene003532:CDS | 30.0% | |
| GTAAGTTAAATTGGTACGAA+TGG | - | chr4.1:30147866-30147885 | None:intergenic | 30.0% | |
| GTTAATATGGAAATCAAAGG+TGG | - | chr4.1:30147657-30147676 | None:intergenic | 30.0% | |
| TAATCGTTTCCAGCTTATTA+TGG | + | chr4.1:30147325-30147344 | MS.gene003532:intron | 30.0% | |
| TAGTTTAGGGATCAAATTGA+TGG | + | chr4.1:30147180-30147199 | MS.gene003532:intron | 30.0% | |
| TCCATATTAACCTGCATATT+GGG | + | chr4.1:30147666-30147685 | MS.gene003532:intron | 30.0% | |
| TCGAGTGTTAAAATATAGTG+GGG | - | chr4.1:30147565-30147584 | None:intergenic | 30.0% | |
| TTCCATATTAACCTGCATAT+TGG | + | chr4.1:30147665-30147684 | MS.gene003532:intron | 30.0% | |
| TTCTTAGTTACCCCAAATTA+GGG | - | chr4.1:30146701-30146720 | None:intergenic | 30.0% | |
| TTTCTTAGTTACCCCAAATT+AGG | - | chr4.1:30146702-30146721 | None:intergenic | 30.0% | |
| ! | AGTTTCAACATTTAAGGCAT+AGG | - | chr4.1:30146624-30146643 | None:intergenic | 30.0% |
| ! | ATGTCAATGTTGTTTAGTTG+TGG | + | chr4.1:30146303-30146322 | MS.gene003532:intron | 30.0% |
| ! | TACAAATTTGATAGGTTGGA+TGG | + | chr4.1:30149003-30149022 | MS.gene003532:intron | 30.0% |
| !! | AAACTGTGATTTTGAAAGAG+GGG | + | chr4.1:30146639-30146658 | MS.gene003532:intron | 30.0% |
| !! | GAAACTGTGATTTTGAAAGA+GGG | + | chr4.1:30146638-30146657 | MS.gene003532:intron | 30.0% |
| !! | TGAAACTGTGATTTTGAAAG+AGG | + | chr4.1:30146637-30146656 | MS.gene003532:intron | 30.0% |
| !!! | CGTCATTGGTTTTGTATTTT+TGG | + | chr4.1:30148066-30148085 | MS.gene003532:intron | 30.0% |
| !!! | TATGCTTTTTCTGATGATGT+AGG | + | chr4.1:30147708-30147727 | MS.gene003532:intron | 30.0% |
| !!! | TGCGTTTTAAGTTGTTTCAT+TGG | + | chr4.1:30148734-30148753 | MS.gene003532:intron | 30.0% |
| AATTAGTGCATGGACCAAAT+GGG | - | chr4.1:30148413-30148432 | None:intergenic | 35.0% | |
| ACCCAATATGCAGGTTAATA+TGG | - | chr4.1:30147670-30147689 | None:intergenic | 35.0% | |
| ACGTATTAGATCGTTTGAAG+AGG | + | chr4.1:30146569-30146588 | MS.gene003532:intron | 35.0% | |
| ACTCTTGTGTCTTATCTGAT+TGG | + | chr4.1:30147600-30147619 | MS.gene003532:intron | 35.0% | |
| AGAAGAGAGAGTAGTAGTTT+AGG | + | chr4.1:30147166-30147185 | MS.gene003532:intron | 35.0% | |
| AGGATCGTGATTGGATTATA+TGG | + | chr4.1:30148017-30148036 | MS.gene003532:CDS | 35.0% | |
| AGGATTAAACATTCTCATGC+TGG | + | chr4.1:30148616-30148635 | MS.gene003532:CDS | 35.0% | |
| ATGGATGTAGCAATAGCAAT+TGG | - | chr4.1:30147847-30147866 | None:intergenic | 35.0% | |
| CCTTACAGAATCATAATGCA+AGG | - | chr4.1:30146267-30146286 | None:intergenic | 35.0% | |
| CCTTGCATTATGATTCTGTA+AGG | + | chr4.1:30146264-30146283 | MS.gene003532:intron | 35.0% | |
| CGTATTAGATCGTTTGAAGA+GGG | + | chr4.1:30146570-30146589 | MS.gene003532:intron | 35.0% | |
| CTAAGAAAATGTATTGGAGG+GGG | + | chr4.1:30146714-30146733 | MS.gene003532:intron | 35.0% | |
| CTGACTCATTCTGTAATCTA+AGG | - | chr4.1:30147264-30147283 | None:intergenic | 35.0% | |
| GAAGAGAGAGTAGTAGTTTA+GGG | + | chr4.1:30147167-30147186 | MS.gene003532:intron | 35.0% | |
| GATACCGTATTTGCAATTGA+AGG | + | chr4.1:30149063-30149082 | MS.gene003532:CDS | 35.0% | |
| GTAAAAACATTGTAGTCCCT+GGG | + | chr4.1:30147210-30147229 | MS.gene003532:intron | 35.0% | |
| TAATTAGTGCATGGACCAAA+TGG | - | chr4.1:30148414-30148433 | None:intergenic | 35.0% | |
| TACAGAATCTCCCTAATTTG+GGG | + | chr4.1:30146688-30146707 | MS.gene003532:intron | 35.0% | |
| TACCGTATTTGCAATTGAAG+GGG | + | chr4.1:30149065-30149084 | MS.gene003532:CDS | 35.0% | |
| TGAAAATTGAGAGAACAAGG+AGG | - | chr4.1:30146011-30146030 | None:intergenic | 35.0% | |
| TGACAAAGTAACTTACCAAC+TGG | - | chr4.1:30148850-30148869 | None:intergenic | 35.0% | |
| TTAAGACAGTGATTGTGTAG+AGG | - | chr4.1:30146830-30146849 | None:intergenic | 35.0% | |
| TTAATCCTGAAATTCTCGTC+CGG | - | chr4.1:30148604-30148623 | None:intergenic | 35.0% | |
| ! | GTTTTTCTTTACCACAGTGA+AGG | + | chr4.1:30148824-30148843 | MS.gene003532:CDS | 35.0% |
| ! | TAAACTTGCTTCTTTGGTTG+TGG | + | chr4.1:30147460-30147479 | MS.gene003532:intron | 35.0% |
| ! | TTCATTGGAAACTTGCTCTA+TGG | + | chr4.1:30148749-30148768 | MS.gene003532:intron | 35.0% |
| !! | AACTGTGATTTTGAAAGAGG+GGG | + | chr4.1:30146640-30146659 | MS.gene003532:intron | 35.0% |
| !! | GATGATGGATGAATCTGTTA+TGG | + | chr4.1:30146211-30146230 | MS.gene003532:intron | 35.0% |
| !!! | AATTTTAGAGCTTTGTGCAC+AGG | + | chr4.1:30148339-30148358 | MS.gene003532:CDS | 35.0% |
| !!! | AGTATCTGGTTTTGTGATTC+AGG | + | chr4.1:30148519-30148538 | MS.gene003532:CDS | 35.0% |
| !!! | GTATCTGGTTTTGTGATTCA+GGG | + | chr4.1:30148520-30148539 | MS.gene003532:CDS | 35.0% |
| !!! | TTTTCTTGGAGGCATTTTCA+GGG | - | chr4.1:30146534-30146553 | None:intergenic | 35.0% |
| AAAAACTGTGGGTACGTCAT+TGG | + | chr4.1:30148052-30148071 | MS.gene003532:intron | 40.0% | |
| AAACAGAGCCTTCAGTTTCA+AGG | + | chr4.1:30146893-30146912 | MS.gene003532:intron | 40.0% | |
| AACTGTGAACCATTGGAATC+AGG | - | chr4.1:30148807-30148826 | None:intergenic | 40.0% | |
| ACCGTATTTGCAATTGAAGG+GGG | + | chr4.1:30149066-30149085 | MS.gene003532:CDS | 40.0% | |
| ACGATCTAATACGTGCAATG+TGG | - | chr4.1:30146563-30146582 | None:intergenic | 40.0% | |
| AGCAAATGCCCATAATAAGC+TGG | - | chr4.1:30147337-30147356 | None:intergenic | 40.0% | |
| AGCAGCTCGAGTAAATGATA+AGG | + | chr4.1:30146499-30146518 | MS.gene003532:intron | 40.0% | |
| AGTCATTGTGGATCTGATCT+GGG | + | chr4.1:30146094-30146113 | MS.gene003532:intron | 40.0% | |
| AGTGCGAACAGTGAATATGA+TGG | - | chr4.1:30147305-30147324 | None:intergenic | 40.0% | |
| ATGCAATAACTTCTGCAGGT+AGG | + | chr4.1:30147997-30148016 | MS.gene003532:intron | 40.0% | |
| ATTAGTGCATGGACCAAATG+GGG | - | chr4.1:30148412-30148431 | None:intergenic | 40.0% | |
| CAACCTTGCCAAAAACAACA+TGG | - | chr4.1:30149032-30149051 | None:intergenic | 40.0% | |
| CAAGTGGTACCAAAAACTGT+GGG | + | chr4.1:30148041-30148060 | MS.gene003532:CDS | 40.0% | |
| CCAGATACTATCCGATGAAA+TGG | - | chr4.1:30148508-30148527 | None:intergenic | 40.0% | |
| CCATAATGTGTAGGTGAGAA+AGG | + | chr4.1:30148442-30148461 | MS.gene003532:intron | 40.0% | |
| CCATTTCATCGGATAGTATC+TGG | + | chr4.1:30148505-30148524 | MS.gene003532:CDS | 40.0% | |
| CCTTTCTCACCTACACATTA+TGG | - | chr4.1:30148445-30148464 | None:intergenic | 40.0% | |
| CGCATTCTCTGCTTCTAAAT+TGG | + | chr4.1:30146038-30146057 | MS.gene003532:CDS | 40.0% | |
| CGTAAAAACATTGTAGTCCC+TGG | + | chr4.1:30147209-30147228 | MS.gene003532:intron | 40.0% | |
| CGTTGTCTCTATGGCTAATT+CGG | + | chr4.1:30148779-30148798 | MS.gene003532:CDS | 40.0% | |
| GATGTGGCATCAAATGAAAG+AGG | + | chr4.1:30147024-30147043 | MS.gene003532:intron | 40.0% | |
| GATTGGATTATATGGCCAAG+TGG | + | chr4.1:30148025-30148044 | MS.gene003532:CDS | 40.0% | |
| GCATCTGAATCTATTTACGG+TGG | + | chr4.1:30148571-30148590 | MS.gene003532:CDS | 40.0% | |
| GGAGATATTGTTCATCGTGA+TGG | + | chr4.1:30148544-30148563 | MS.gene003532:CDS | 40.0% | |
| GTGCGAACAGTGAATATGAT+GGG | - | chr4.1:30147304-30147323 | None:intergenic | 40.0% | |
| GTTGTCTCTATGGCTAATTC+GGG | + | chr4.1:30148780-30148799 | MS.gene003532:CDS | 40.0% | |
| TCCCCCTTCAATTGCAAATA+CGG | - | chr4.1:30149070-30149089 | None:intergenic | 40.0% | |
| TCTGTAAGGTCTAACTCAAC+TGG | + | chr4.1:30146278-30146297 | MS.gene003532:intron | 40.0% | |
| TGAAACTGAAGGCTCTGTTT+GGG | - | chr4.1:30146893-30146912 | None:intergenic | 40.0% | |
| TGGTATGCAATAACTTCTGC+AGG | + | chr4.1:30147993-30148012 | MS.gene003532:intron | 40.0% | |
| TTATCATTTACTCGAGCTGC+TGG | - | chr4.1:30146500-30146519 | None:intergenic | 40.0% | |
| TTGAAACTGAAGGCTCTGTT+TGG | - | chr4.1:30146894-30146913 | None:intergenic | 40.0% | |
| TTTGACTGAACCCAATATGC+AGG | - | chr4.1:30147679-30147698 | None:intergenic | 40.0% | |
| ! | AATGACGTACCCACAGTTTT+TGG | - | chr4.1:30148053-30148072 | None:intergenic | 40.0% |
| ! | AATGTATTGGAGGGGGATTT+TGG | + | chr4.1:30146721-30146740 | MS.gene003532:intron | 40.0% |
| ! | CAATGTGGCAATGCTTTTCT+TGG | - | chr4.1:30146548-30146567 | None:intergenic | 40.0% |
| ! | CTCCTCTTCTGTTTTCTCAT+CGG | - | chr4.1:30147734-30147753 | None:intergenic | 40.0% |
| ! | TGATTGATAGCCTGTCATGT+AGG | + | chr4.1:30148920-30148939 | MS.gene003532:intron | 40.0% |
| ! | TGGTGTGTGACAATTTGCTT+GGG | + | chr4.1:30148636-30148655 | MS.gene003532:intron | 40.0% |
| !! | AGAGGGGGTATCTATACTTA+AGG | + | chr4.1:30146655-30146674 | MS.gene003532:intron | 40.0% |
| !! | GAGGGGGTATCTATACTTAA+GGG | + | chr4.1:30146656-30146675 | MS.gene003532:intron | 40.0% |
| !! | TGAAGTAAGATAAAGGTGCC+TGG | + | chr4.1:30146976-30146995 | MS.gene003532:intron | 40.0% |
| !!! | AGACCATGTTGTTTTTGGCA+AGG | + | chr4.1:30149026-30149045 | MS.gene003532:CDS | 40.0% |
| !!! | CTTTTCTTGGAGGCATTTTC+AGG | - | chr4.1:30146535-30146554 | None:intergenic | 40.0% |
| !!! | GATGGAGACCATGTTGTTTT+TGG | + | chr4.1:30149021-30149040 | MS.gene003532:CDS | 40.0% |
| !!! | GTTTTTGGCAAGGTTGTTCA+AGG | + | chr4.1:30149036-30149055 | MS.gene003532:CDS | 40.0% |
| AATTCGGGACCTGATTCCAA+TGG | + | chr4.1:30148795-30148814 | MS.gene003532:CDS | 45.0% | |
| ACTGTATGGCTAGAAGGATG+TGG | + | chr4.1:30147008-30147027 | MS.gene003532:intron | 45.0% | |
| ACTTGCTTCTTTGGTTGTGG+TGG | + | chr4.1:30147463-30147482 | MS.gene003532:intron | 45.0% | |
| AGAGAACAAGGAGGAGAATG+AGG | - | chr4.1:30146002-30146021 | None:intergenic | 45.0% | |
| AGAGATACCGAAGAGCAAGT+GGG | + | chr4.1:30149143-30149162 | MS.gene003532:CDS | 45.0% | |
| CAGTCATTGTGGATCTGATC+TGG | + | chr4.1:30146093-30146112 | MS.gene003532:intron | 45.0% | |
| CCAAGTGGTACCAAAAACTG+TGG | + | chr4.1:30148040-30148059 | MS.gene003532:CDS | 45.0% | |
| CCATACAGTCTCTTCTAACC+AGG | - | chr4.1:30146997-30147016 | None:intergenic | 45.0% | |
| CCTGGTTAGAAGAGACTGTA+TGG | + | chr4.1:30146994-30147013 | MS.gene003532:intron | 45.0% | |
| CTTGCTTGCCTTGAAACTGA+AGG | - | chr4.1:30146904-30146923 | None:intergenic | 45.0% | |
| GAAGAGACTGTATGGCTAGA+AGG | + | chr4.1:30147002-30147021 | MS.gene003532:intron | 45.0% | |
| GAGGAAGAAGGTAGTGATTG+CGG | + | chr4.1:30149113-30149132 | MS.gene003532:CDS | 45.0% | |
| GCAATCACTACCTTCTTCCT+CGG | - | chr4.1:30149114-30149133 | None:intergenic | 45.0% | |
| GCTCGAGTAAATGATAAGGC+AGG | + | chr4.1:30146503-30146522 | MS.gene003532:intron | 45.0% | |
| GCTGTATCTTCCTACATGAC+AGG | - | chr4.1:30148933-30148952 | None:intergenic | 45.0% | |
| TATTTACGGTGGCACCTTTC+CGG | + | chr4.1:30148582-30148601 | MS.gene003532:CDS | 45.0% | |
| TTAGTGCATGGACCAAATGG+GGG | - | chr4.1:30148411-30148430 | None:intergenic | 45.0% | |
| ! | CTGGTGTGTGACAATTTGCT+TGG | + | chr4.1:30148635-30148654 | MS.gene003532:intron | 45.0% |
| ! | GAAACTTGCTCTATGGTTGC+AGG | + | chr4.1:30148756-30148775 | MS.gene003532:intron | 45.0% |
| ! | TGTGGCAATGCTTTTCTTGG+AGG | - | chr4.1:30146545-30146564 | None:intergenic | 45.0% |
| !!! | CCACAGTTTTTGGTACCACT+TGG | - | chr4.1:30148043-30148062 | None:intergenic | 45.0% |
| !!! | TCTGGTTTTGTGATTCAGGG+TGG | + | chr4.1:30148523-30148542 | MS.gene003532:CDS | 45.0% |
| AACTCACACACACAACTGCG+AGG | - | chr4.1:30146345-30146364 | None:intergenic | 50.0% | |
| AACTGAAGGCTCTGTTTGGG+AGG | - | chr4.1:30146890-30146909 | None:intergenic | 50.0% | |
| AACTGCGAGGACTCAAGTGA+AGG | - | chr4.1:30146332-30146351 | None:intergenic | 50.0% | |
| AAGGTAGTGATTGCGGACTC+TGG | + | chr4.1:30149120-30149139 | MS.gene003532:CDS | 50.0% | |
| ACTGAAGGCTCTGTTTGGGA+GGG | - | chr4.1:30146889-30146908 | None:intergenic | 50.0% | |
| ACTGCGAGGACTCAAGTGAA+GGG | - | chr4.1:30146331-30146350 | None:intergenic | 50.0% | |
| AGGAGGAGAATGAGGAATCG+AGG | - | chr4.1:30145994-30146013 | None:intergenic | 50.0% | |
| CCTGAAATTCTCGTCCGGAA+AGG | - | chr4.1:30148599-30148618 | None:intergenic | 50.0% | |
| CCTTTCCGGACGAGAATTTC+AGG | + | chr4.1:30148596-30148615 | MS.gene003532:CDS | 50.0% | |
| CTTCCTCGGTTTCCCACTAT+AGG | - | chr4.1:30149100-30149119 | None:intergenic | 50.0% | |
| CTTGCAGAAATGCTCTCCCA+GGG | - | chr4.1:30147229-30147248 | None:intergenic | 50.0% | |
| GAGAGATACCGAAGAGCAAG+TGG | + | chr4.1:30149142-30149161 | MS.gene003532:CDS | 50.0% | |
| GGCCGATGAGAAAACAGAAG+AGG | + | chr4.1:30147729-30147748 | MS.gene003532:intron | 50.0% | |
| TAGTGGGAAACCGAGGAAGA+AGG | + | chr4.1:30149101-30149120 | MS.gene003532:CDS | 50.0% | |
| TCTGCAGGTAGGATCGTGAT+TGG | + | chr4.1:30148008-30148027 | MS.gene003532:intron | 50.0% | |
| TCTGTTTGGGAGGGAAAGAG+AGG | - | chr4.1:30146880-30146899 | None:intergenic | 50.0% | |
| TCTTGCAGAAATGCTCTCCC+AGG | - | chr4.1:30147230-30147249 | None:intergenic | 50.0% | |
| TGGCAAGGTTGTTCAAGGCA+TGG | + | chr4.1:30149041-30149060 | MS.gene003532:CDS | 50.0% | |
| TTACCACAGTGAAGGCCAGT+TGG | + | chr4.1:30148832-30148851 | MS.gene003532:CDS | 50.0% | |
| TTTGCAATTGAAGGGGGAGC+TGG | + | chr4.1:30149072-30149091 | MS.gene003532:CDS | 50.0% | |
| ! | GAACCTATAGTGGGAAACCG+AGG | + | chr4.1:30149094-30149113 | MS.gene003532:CDS | 50.0% |
| ! | GGGCATTTGCTGCATCATAG+AGG | + | chr4.1:30147346-30147365 | MS.gene003532:intron | 50.0% |
| !! | GAGGGGGATTTTGGAAGTGT+TGG | + | chr4.1:30146730-30146749 | MS.gene003532:intron | 50.0% |
| !! | TTACCAACTGGCCTTCACTG+TGG | - | chr4.1:30148838-30148857 | None:intergenic | 50.0% |
| CTGCGAGGACTCAAGTGAAG+GGG | - | chr4.1:30146330-30146349 | None:intergenic | 55.0% | |
| GGGGAGCTGGAACCTATAGT+GGG | + | chr4.1:30149085-30149104 | MS.gene003532:CDS | 55.0% | |
| TCCTCGTCCCACTTGCTCTT+CGG | - | chr4.1:30149153-30149172 | None:intergenic | 55.0% | |
| ! | GAGAAAGGCGAGAGTGCAAG+CGG | + | chr4.1:30148457-30148476 | MS.gene003532:CDS | 55.0% |
| ! | GGTGGGTTCAAGTGTGTGTC+AGG | + | chr4.1:30146426-30146445 | MS.gene003532:intron | 55.0% |
| ! | GGTTGCAGGCGTTGTCTCTA+TGG | + | chr4.1:30148770-30148789 | MS.gene003532:intron | 55.0% |
| ACCGAAGAGCAAGTGGGACG+AGG | + | chr4.1:30149149-30149168 | MS.gene003532:CDS | 60.0% | |
| GGGGGAGCTGGAACCTATAG+TGG | + | chr4.1:30149084-30149103 | MS.gene003532:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.1 | gene | 30145961 | 30149179 | 30145961 | ID=MS.gene003532 |
| chr4.1 | mRNA | 30145961 | 30149179 | 30145961 | ID=MS.gene003532.t1;Parent=MS.gene003532 |
| chr4.1 | exon | 30145961 | 30146059 | 30145961 | ID=MS.gene003532.t1.exon1;Parent=MS.gene003532.t1 |
| chr4.1 | CDS | 30145961 | 30146059 | 30145961 | ID=cds.MS.gene003532.t1;Parent=MS.gene003532.t1 |
| chr4.1 | exon | 30147730 | 30147808 | 30147730 | ID=MS.gene003532.t1.exon2;Parent=MS.gene003532.t1 |
| chr4.1 | CDS | 30147730 | 30147808 | 30147730 | ID=cds.MS.gene003532.t1;Parent=MS.gene003532.t1 |
| chr4.1 | exon | 30148015 | 30148062 | 30148015 | ID=MS.gene003532.t1.exon3;Parent=MS.gene003532.t1 |
| chr4.1 | CDS | 30148015 | 30148062 | 30148015 | ID=cds.MS.gene003532.t1;Parent=MS.gene003532.t1 |
| chr4.1 | exon | 30148337 | 30148360 | 30148337 | ID=MS.gene003532.t1.exon4;Parent=MS.gene003532.t1 |
| chr4.1 | CDS | 30148337 | 30148360 | 30148337 | ID=cds.MS.gene003532.t1;Parent=MS.gene003532.t1 |
| chr4.1 | exon | 30148455 | 30148637 | 30148455 | ID=MS.gene003532.t1.exon5;Parent=MS.gene003532.t1 |
| chr4.1 | CDS | 30148455 | 30148637 | 30148455 | ID=cds.MS.gene003532.t1;Parent=MS.gene003532.t1 |
| chr4.1 | exon | 30148778 | 30148853 | 30148778 | ID=MS.gene003532.t1.exon6;Parent=MS.gene003532.t1 |
| chr4.1 | CDS | 30148778 | 30148853 | 30148778 | ID=cds.MS.gene003532.t1;Parent=MS.gene003532.t1 |
| chr4.1 | exon | 30149017 | 30149179 | 30149017 | ID=MS.gene003532.t1.exon7;Parent=MS.gene003532.t1 |
| chr4.1 | CDS | 30149017 | 30149179 | 30149017 | ID=cds.MS.gene003532.t1;Parent=MS.gene003532.t1 |
| Gene Sequence |
| Protein sequence |
