Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene04526.t1 | XP_013460238.1 | 97.5 | 204 | 4 | 1 | 1 | 204 | 1 | 203 | 2.20E-107 | 398.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene04526.t1 | Q9SP02 | 87.7 | 204 | 25 | 0 | 1 | 204 | 1 | 204 | 5.8e-101 | 368.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene04526.t1 | I3S3K3 | 97.5 | 204 | 4 | 1 | 1 | 204 | 1 | 203 | 1.6e-107 | 398.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene050574 | MS.gene04526 | PPI |
| MS.gene39668 | MS.gene04526 | PPI |
| MS.gene003412 | MS.gene04526 | PPI |
| MS.gene28703 | MS.gene04526 | PPI |
| MS.gene050281 | MS.gene04526 | PPI |
| MS.gene22872 | MS.gene04526 | PPI |
| MS.gene025980 | MS.gene04526 | PPI |
| MS.gene68153 | MS.gene04526 | PPI |
| MS.gene23546 | MS.gene04526 | PPI |
| MS.gene014216 | MS.gene04526 | PPI |
| MS.gene052269 | MS.gene04526 | PPI |
| MS.gene063104 | MS.gene04526 | PPI |
| MS.gene057696 | MS.gene04526 | PPI |
| MS.gene063787 | MS.gene04526 | PPI |
| MS.gene23663 | MS.gene04526 | PPI |
| MS.gene051153 | MS.gene04526 | PPI |
| MS.gene063029 | MS.gene04526 | PPI |
| MS.gene052266 | MS.gene04526 | PPI |
| MS.gene019366 | MS.gene04526 | PPI |
| MS.gene04526 | MS.gene007179 | PPI |
| MS.gene024514 | MS.gene04526 | PPI |
| MS.gene61767 | MS.gene04526 | PPI |
| MS.gene28963 | MS.gene04526 | PPI |
| MS.gene68752 | MS.gene04526 | PPI |
| MS.gene88451 | MS.gene04526 | PPI |
| MS.gene04526 | MS.gene003532 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene04526.t1 | MTR_3g463900 | 97.549 | 204 | 4 | 1 | 1 | 204 | 1 | 203 | 7.89e-145 | 401 |
| MS.gene04526.t1 | MTR_3g070500 | 83.523 | 176 | 29 | 0 | 27 | 202 | 56 | 231 | 1.87e-108 | 310 |
| MS.gene04526.t1 | MTR_4g075290 | 68.235 | 170 | 54 | 0 | 33 | 202 | 2 | 171 | 5.93e-84 | 246 |
| MS.gene04526.t1 | MTR_7g116340 | 69.461 | 167 | 51 | 0 | 36 | 202 | 5 | 171 | 1.96e-83 | 245 |
| MS.gene04526.t1 | MTR_4g073650 | 59.799 | 199 | 78 | 2 | 7 | 203 | 17 | 215 | 8.37e-82 | 243 |
| MS.gene04526.t1 | MTR_3g070500 | 84.211 | 133 | 21 | 0 | 27 | 159 | 56 | 188 | 2.97e-81 | 240 |
| MS.gene04526.t1 | MTR_3g117750 | 68.263 | 167 | 53 | 0 | 36 | 202 | 13 | 179 | 5.64e-80 | 237 |
| MS.gene04526.t1 | MTR_1g085560 | 67.598 | 179 | 48 | 3 | 29 | 204 | 78 | 249 | 4.12e-78 | 234 |
| MS.gene04526.t1 | MTR_7g110980 | 60.317 | 189 | 63 | 3 | 21 | 204 | 78 | 259 | 4.35e-75 | 227 |
| MS.gene04526.t1 | MTR_1g117010 | 64.407 | 177 | 52 | 3 | 32 | 204 | 74 | 243 | 6.26e-73 | 221 |
| MS.gene04526.t1 | MTR_1g117010 | 64.407 | 177 | 52 | 3 | 32 | 204 | 74 | 243 | 6.26e-73 | 221 |
| MS.gene04526.t1 | MTR_7g095750 | 65.868 | 167 | 56 | 1 | 37 | 202 | 9 | 175 | 6.71e-71 | 227 |
| MS.gene04526.t1 | MTR_8g079690 | 60.355 | 169 | 65 | 2 | 36 | 202 | 5 | 173 | 1.51e-64 | 203 |
| MS.gene04526.t1 | MTR_3g070500 | 84.259 | 108 | 17 | 0 | 27 | 134 | 56 | 163 | 6.39e-64 | 195 |
| MS.gene04526.t1 | MTR_3g070500 | 84.112 | 107 | 17 | 0 | 27 | 133 | 56 | 162 | 2.42e-63 | 194 |
| MS.gene04526.t1 | MTR_4g086760 | 57.895 | 171 | 68 | 3 | 36 | 203 | 5 | 174 | 2.44e-62 | 196 |
| MS.gene04526.t1 | MTR_4g086760 | 57.895 | 171 | 68 | 3 | 36 | 203 | 5 | 174 | 3.17e-62 | 196 |
| MS.gene04526.t1 | MTR_4g086760 | 57.895 | 171 | 68 | 3 | 36 | 203 | 5 | 174 | 3.79e-62 | 197 |
| MS.gene04526.t1 | MTR_8g040180 | 57.143 | 168 | 68 | 3 | 37 | 202 | 20 | 185 | 8.67e-60 | 185 |
| MS.gene04526.t1 | MTR_3g107660 | 50.847 | 177 | 82 | 2 | 30 | 201 | 1 | 177 | 1.22e-49 | 172 |
| MS.gene04526.t1 | MTR_1g011980 | 52.907 | 172 | 79 | 2 | 31 | 201 | 3 | 173 | 2.27e-49 | 171 |
| MS.gene04526.t1 | MTR_2g085075 | 49.333 | 150 | 63 | 5 | 49 | 196 | 471 | 609 | 1.79e-35 | 131 |
| MS.gene04526.t1 | MTR_7g105220 | 49.624 | 133 | 55 | 4 | 49 | 180 | 19 | 140 | 5.95e-35 | 121 |
| MS.gene04526.t1 | MTR_3g085705 | 48.780 | 123 | 58 | 3 | 68 | 190 | 7 | 124 | 1.36e-31 | 111 |
| MS.gene04526.t1 | MTR_8g036015 | 49.265 | 136 | 57 | 4 | 47 | 181 | 8 | 132 | 3.88e-31 | 111 |
| MS.gene04526.t1 | MTR_5g015500 | 47.761 | 134 | 58 | 4 | 49 | 181 | 314 | 436 | 2.48e-28 | 111 |
| MS.gene04526.t1 | MTR_5g015500 | 47.761 | 134 | 58 | 4 | 49 | 181 | 354 | 476 | 4.15e-28 | 110 |
| MS.gene04526.t1 | MTR_2g023120 | 42.000 | 150 | 64 | 8 | 49 | 190 | 22 | 156 | 7.36e-22 | 92.8 |
| MS.gene04526.t1 | MTR_6g084140 | 37.342 | 158 | 78 | 7 | 49 | 196 | 10 | 156 | 4.01e-19 | 85.1 |
| MS.gene04526.t1 | MTR_6g084140 | 35.443 | 158 | 81 | 5 | 49 | 196 | 27 | 173 | 4.63e-19 | 85.1 |
| MS.gene04526.t1 | MTR_8g442420 | 36.709 | 158 | 79 | 7 | 49 | 196 | 10 | 156 | 5.53e-18 | 81.6 |
| MS.gene04526.t1 | MTR_1g094065 | 32.895 | 152 | 83 | 7 | 49 | 198 | 89 | 223 | 1.89e-13 | 67.0 |
| MS.gene04526.t1 | MTR_2g461260 | 28.846 | 156 | 79 | 6 | 49 | 182 | 92 | 237 | 4.43e-11 | 61.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene04526.t1 | AT2G29960 | 87.255 | 204 | 23 | 1 | 1 | 204 | 1 | 201 | 1.53e-129 | 363 |
| MS.gene04526.t1 | AT2G29960 | 87.255 | 204 | 23 | 1 | 1 | 204 | 1 | 201 | 1.53e-129 | 363 |
| MS.gene04526.t1 | AT5G58710 | 90.761 | 184 | 17 | 0 | 21 | 204 | 21 | 204 | 1.38e-124 | 350 |
| MS.gene04526.t1 | AT2G29960 | 83.824 | 204 | 20 | 2 | 1 | 204 | 1 | 191 | 3.45e-121 | 341 |
| MS.gene04526.t1 | AT3G55920 | 68.304 | 224 | 48 | 2 | 4 | 204 | 5 | 228 | 4.00e-104 | 299 |
| MS.gene04526.t1 | AT4G38740 | 70.060 | 167 | 50 | 0 | 36 | 202 | 5 | 171 | 5.71e-85 | 249 |
| MS.gene04526.t1 | AT2G21130 | 70.659 | 167 | 49 | 0 | 36 | 202 | 6 | 172 | 1.58e-84 | 248 |
| MS.gene04526.t1 | AT2G16600 | 70.060 | 167 | 50 | 0 | 36 | 202 | 6 | 172 | 6.35e-84 | 246 |
| MS.gene04526.t1 | AT3G56070 | 68.862 | 167 | 52 | 0 | 36 | 202 | 5 | 171 | 2.78e-82 | 242 |
| MS.gene04526.t1 | AT3G56070 | 68.862 | 167 | 52 | 0 | 36 | 202 | 5 | 171 | 2.78e-82 | 242 |
| MS.gene04526.t1 | AT4G34960 | 61.000 | 200 | 73 | 3 | 5 | 203 | 21 | 216 | 5.42e-82 | 243 |
| MS.gene04526.t1 | AT3G62030 | 63.351 | 191 | 58 | 3 | 19 | 204 | 74 | 257 | 9.94e-80 | 239 |
| MS.gene04526.t1 | AT3G62030 | 66.854 | 178 | 51 | 2 | 28 | 204 | 88 | 258 | 3.37e-79 | 237 |
| MS.gene04526.t1 | AT5G13120 | 62.567 | 187 | 59 | 3 | 22 | 204 | 77 | 256 | 1.57e-78 | 236 |
| MS.gene04526.t1 | AT5G13120 | 62.567 | 187 | 59 | 3 | 22 | 204 | 73 | 252 | 1.72e-78 | 235 |
| MS.gene04526.t1 | AT3G62030 | 66.854 | 178 | 51 | 2 | 28 | 204 | 141 | 311 | 1.75e-78 | 237 |
| MS.gene04526.t1 | AT4G34870 | 65.868 | 167 | 57 | 0 | 36 | 202 | 5 | 171 | 2.76e-76 | 227 |
| MS.gene04526.t1 | AT3G63400 | 63.953 | 172 | 61 | 1 | 31 | 201 | 3 | 174 | 2.07e-69 | 216 |
| MS.gene04526.t1 | AT3G63400 | 63.953 | 172 | 61 | 1 | 31 | 201 | 3 | 174 | 2.05e-67 | 216 |
| MS.gene04526.t1 | AT3G63400 | 63.953 | 172 | 61 | 1 | 31 | 201 | 3 | 174 | 2.05e-67 | 216 |
| MS.gene04526.t1 | AT3G63400 | 63.953 | 172 | 61 | 1 | 31 | 201 | 3 | 174 | 2.05e-67 | 216 |
| MS.gene04526.t1 | AT2G15790 | 61.404 | 171 | 64 | 2 | 35 | 203 | 4 | 174 | 1.45e-66 | 208 |
| MS.gene04526.t1 | AT4G34960 | 60.645 | 155 | 57 | 2 | 5 | 159 | 21 | 171 | 2.35e-62 | 191 |
| MS.gene04526.t1 | AT2G16600 | 58.683 | 167 | 47 | 1 | 36 | 202 | 6 | 150 | 4.24e-62 | 190 |
| MS.gene04526.t1 | AT2G38730 | 57.143 | 168 | 68 | 3 | 37 | 202 | 34 | 199 | 2.31e-59 | 185 |
| MS.gene04526.t1 | AT3G22920 | 52.632 | 171 | 69 | 5 | 36 | 202 | 5 | 167 | 5.97e-50 | 162 |
| MS.gene04526.t1 | AT4G32420 | 51.163 | 172 | 83 | 1 | 31 | 201 | 3 | 174 | 1.30e-46 | 164 |
| MS.gene04526.t1 | AT4G32420 | 51.163 | 172 | 83 | 1 | 31 | 201 | 3 | 174 | 1.30e-46 | 164 |
| MS.gene04526.t1 | AT4G32420 | 51.163 | 172 | 83 | 1 | 31 | 201 | 3 | 174 | 1.30e-46 | 164 |
| MS.gene04526.t1 | AT4G32420 | 51.163 | 172 | 83 | 1 | 31 | 201 | 3 | 174 | 1.30e-46 | 164 |
| MS.gene04526.t1 | AT4G32420 | 51.534 | 163 | 78 | 1 | 31 | 192 | 3 | 165 | 6.15e-44 | 156 |
| MS.gene04526.t1 | AT3G44600 | 49.333 | 150 | 63 | 5 | 49 | 196 | 485 | 623 | 2.22e-35 | 131 |
| MS.gene04526.t1 | AT2G36130 | 49.624 | 133 | 55 | 4 | 49 | 180 | 19 | 140 | 2.31e-35 | 122 |
| MS.gene04526.t1 | AT1G01940 | 50.000 | 136 | 56 | 4 | 47 | 181 | 8 | 132 | 5.65e-32 | 114 |
| MS.gene04526.t1 | AT5G67530 | 43.137 | 153 | 74 | 5 | 49 | 199 | 353 | 494 | 5.71e-28 | 110 |
| MS.gene04526.t1 | AT4G33060 | 43.284 | 134 | 61 | 6 | 49 | 180 | 22 | 142 | 1.44e-25 | 103 |
| MS.gene04526.t1 | AT1G53720 | 36.709 | 158 | 79 | 7 | 49 | 196 | 10 | 156 | 1.70e-18 | 82.4 |
| MS.gene04526.t1 | AT1G53720 | 36.709 | 158 | 79 | 7 | 49 | 196 | 10 | 156 | 2.63e-18 | 82.8 |
Find 47 sgRNAs with CRISPR-Local
Find 239 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CGGAACCCTATCTCTTATTC+AGG | 0.267505 | 3.4:-59122984 | MS.gene04526:intron |
| CGGAAACCTGAATAAGAGAT+AGG | 0.350331 | 3.4:+59122978 | None:intergenic |
| AATTGTGAACCATTGGTATC+AGG | 0.357115 | 3.4:+59120356 | None:intergenic |
| TATCGAATTATTAGGGGAAA+AGG | 0.357432 | 3.4:-59120691 | MS.gene04526:intron |
| GAAAAGGGGACCGGTAAATC+TGG | 0.378050 | 3.4:-59120675 | MS.gene04526:CDS |
| CTCTTATCACTGTTCCTCTT+CGG | 0.383660 | 3.4:-59123004 | MS.gene04526:CDS |
| AAGAGGCTTTCCAGATTTAC+CGG | 0.405654 | 3.4:+59120665 | None:intergenic |
| CAGATTGATGGGAAGGATGC+AGG | 0.418145 | 3.4:-59122716 | MS.gene04526:intron |
| ATCGAATTATTAGGGGAAAA+GGG | 0.420476 | 3.4:-59120690 | MS.gene04526:intron |
| AGCAATCACAACCTTGCTCT+TGG | 0.426225 | 3.4:+59118547 | None:intergenic |
| TTTACACATGGCAATGGAAT+GGG | 0.433694 | 3.4:-59120582 | MS.gene04526:CDS |
| TGGAAAGGTGCTTTCGGGAA+TGG | 0.451229 | 3.4:-59118615 | MS.gene04526:CDS |
| TGCCCAGGTCGTATTGTAAT+AGG | 0.454334 | 3.4:-59121236 | MS.gene04526:intron |
| TGAATTAATGCAGGCAAAGA+AGG | 0.458033 | 3.4:-59122786 | MS.gene04526:intron |
| ATGGGCGGAGAATCAATTTA+CGG | 0.458516 | 3.4:-59120564 | MS.gene04526:CDS |
| GAAGGCGAAAGAGGATTTGA+AGG | 0.459280 | 3.4:-59122768 | MS.gene04526:CDS |
| GCAATCACAACCTTGCTCTT+GGG | 0.462284 | 3.4:+59118548 | None:intergenic |
| AAGCTAAAGCACACTGGTCC+AGG | 0.474279 | 3.4:-59120516 | MS.gene04526:intron |
| CCTCCTTGGATCATAAAGCT+AGG | 0.503079 | 3.4:+59120609 | None:intergenic |
| ATGAGAGGATGCACTTATAG+AGG | 0.504255 | 3.4:+59118509 | None:intergenic |
| AACTTCCGAGCTCTTTGCAC+AGG | 0.508572 | 3.4:-59121089 | MS.gene04526:intron |
| ATCCCTAGCTTTATGATCCA+AGG | 0.510185 | 3.4:-59120612 | MS.gene04526:CDS |
| TAAAGCTAGGGATAATCCTA+TGG | 0.516056 | 3.4:+59120622 | None:intergenic |
| GAGCTACCTTTGTAATGAAG+AGG | 0.529680 | 3.4:+59120648 | None:intergenic |
| GCAGGCAAAGAAGGCGAAAG+AGG | 0.535933 | 3.4:-59122777 | MS.gene04526:intron |
| CTCCTTGGATCATAAAGCTA+GGG | 0.541065 | 3.4:+59120610 | None:intergenic |
| TCACAACTGTGACAACTAGC+TGG | 0.548760 | 3.4:-59120328 | MS.gene04526:intron |
| TGATGTTCAGATTGATGGGA+AGG | 0.552173 | 3.4:-59122723 | MS.gene04526:CDS |
| GCTCACCTGTGCAAAGAGCT+CGG | 0.558048 | 3.4:+59121084 | None:intergenic |
| TATCTGTTCGATAGGTTGGA+TGG | 0.559737 | 3.4:-59118653 | MS.gene04526:intron |
| ACAAAGGTAGCTCATTCCAT+AGG | 0.561949 | 3.4:-59120638 | MS.gene04526:CDS |
| CATGTGTAAAATCACCTCCT+TGG | 0.569371 | 3.4:+59120595 | None:intergenic |
| GGAAACCTGAATAAGAGATA+GGG | 0.572991 | 3.4:+59122979 | None:intergenic |
| TGTTCGATAGGTTGGATGGA+AGG | 0.578646 | 3.4:-59118649 | MS.gene04526:intron |
| GTTTACAAGATTGAAGCTGA+AGG | 0.584212 | 3.4:-59118587 | MS.gene04526:CDS |
| TCGAATTATTAGGGGAAAAG+GGG | 0.585482 | 3.4:-59120689 | MS.gene04526:intron |
| TTATTAGGGGAAAAGGGGAC+CGG | 0.590285 | 3.4:-59120684 | MS.gene04526:intron |
| AAGGTTGTGATTGCTGATAG+TGG | 0.613906 | 3.4:-59118539 | MS.gene04526:CDS |
| AAGTGGCACTCCCAAGAGCA+AGG | 0.616632 | 3.4:-59118558 | MS.gene04526:CDS |
| GGAAAGCCTCTTCATTACAA+AGG | 0.618832 | 3.4:-59120654 | MS.gene04526:CDS |
| ACACATGGCAATGGAATGGG+CGG | 0.629266 | 3.4:-59120579 | MS.gene04526:CDS |
| TTTGAAGGAAGTGACAAACA+AGG | 0.637543 | 3.4:-59122753 | MS.gene04526:CDS |
| AACTTCAAGCTAAAGCACAC+TGG | 0.639521 | 3.4:-59120522 | MS.gene04526:CDS |
| AATGCTGGTCCTGATACCAA+TGG | 0.652457 | 3.4:-59120365 | MS.gene04526:CDS |
| GAAGCTGAAGGAAATCAAAG+TGG | 0.680132 | 3.4:-59118575 | MS.gene04526:CDS |
| TAAGAGATAGGGTTCCGAAG+AGG | 0.689273 | 3.4:+59122990 | None:intergenic |
| CCTAGCTTTATGATCCAAGG+AGG | 0.704339 | 3.4:-59120609 | MS.gene04526:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAAAATATAAATAAATCTTG+TGG | + | chr3.4:59119939-59119958 | None:intergenic | 10.0% |
| !! | TTACAAATTGAAATATATTA+TGG | - | chr3.4:59120808-59120827 | MS.gene04526:intron | 10.0% |
| !! | TTTATTATAAAAAAATCTCA+TGG | + | chr3.4:59119981-59120000 | None:intergenic | 10.0% |
| !!! | ATTCAAAAAAATTTTAGAAA+TGG | - | chr3.4:59119280-59119299 | MS.gene04526:intron | 10.0% |
| !!! | CAAAAATATAATGATTTTAA+TGG | + | chr3.4:59119818-59119837 | None:intergenic | 10.0% |
| !!! | TTTATTTTTTTTCATTTTGA+AGG | - | chr3.4:59119397-59119416 | MS.gene04526:intron | 10.0% |
| !! | AAATTATCCTTATTAACTAT+TGG | + | chr3.4:59122708-59122727 | None:intergenic | 15.0% |
| !! | AATAGTTAATAAGGATAATT+TGG | - | chr3.4:59122707-59122726 | MS.gene04526:intron | 15.0% |
| !! | AATTATTCGAATATATATCA+TGG | - | chr3.4:59118629-59118648 | MS.gene04526:CDS | 15.0% |
| !! | AATTTCTTTGTATCATTAAT+AGG | + | chr3.4:59119482-59119501 | None:intergenic | 15.0% |
| !! | ATTATTAAAAACATTACCTT+TGG | + | chr3.4:59122150-59122169 | None:intergenic | 15.0% |
| !! | TATTAAATGTTATTAGGAAA+TGG | + | chr3.4:59120745-59120764 | None:intergenic | 15.0% |
| !! | TCAAAAAAAGAAACTTTATT+TGG | + | chr3.4:59122174-59122193 | None:intergenic | 15.0% |
| !! | TCAGTATATTAAATGTTATT+AGG | + | chr3.4:59120751-59120770 | None:intergenic | 15.0% |
| !!! | CATTTTGAAACAAAATTTTT+TGG | + | chr3.4:59122581-59122600 | None:intergenic | 15.0% |
| !!! | TAGTTTTAAAAGTAATACTT+TGG | + | chr3.4:59122684-59122703 | None:intergenic | 15.0% |
| !!! | TTTTTTTATAAAAAGTCTTG+TGG | - | chr3.4:59119125-59119144 | MS.gene04526:intron | 15.0% |
| !! | AAAAGAAATCATGATAACAT+TGG | + | chr3.4:59121448-59121467 | None:intergenic | 20.0% |
| !! | AAAAGTAAAGAAACAAATCT+TGG | - | chr3.4:59119655-59119674 | MS.gene04526:intron | 20.0% |
| !! | AAACTAACCAATAGTTAATA+AGG | - | chr3.4:59122698-59122717 | MS.gene04526:intron | 20.0% |
| !! | AAGGATTATATCATAAGATT+TGG | - | chr3.4:59119224-59119243 | MS.gene04526:intron | 20.0% |
| !! | AATGATTAAAAGAAAGAGAA+TGG | + | chr3.4:59122741-59122760 | None:intergenic | 20.0% |
| !! | ACAACTTAAAAAATGTCTAT+TGG | + | chr3.4:59119845-59119864 | None:intergenic | 20.0% |
| !! | ATAATCTGAGAAAAAAAATG+TGG | - | chr3.4:59121941-59121960 | MS.gene04526:intron | 20.0% |
| !! | ATTATATCATAAGATTTGGA+AGG | - | chr3.4:59119228-59119247 | MS.gene04526:intron | 20.0% |
| !! | ATTTGTAATTTGGATTTCAA+AGG | - | chr3.4:59119205-59119224 | MS.gene04526:intron | 20.0% |
| !! | TAAATATCAATTTCCAGTAT+TGG | + | chr3.4:59119377-59119396 | None:intergenic | 20.0% |
| !! | TAGCTGATAACAAATTTATT+GGG | + | chr3.4:59120100-59120119 | None:intergenic | 20.0% |
| !! | TATATAAAGAGAACAAAACT+AGG | - | chr3.4:59121484-59121503 | MS.gene04526:intron | 20.0% |
| !! | TCATTTGTATCGAATTATTA+GGG | - | chr3.4:59120853-59120872 | MS.gene04526:intron | 20.0% |
| !! | TTAGCTGATAACAAATTTAT+TGG | + | chr3.4:59120101-59120120 | None:intergenic | 20.0% |
| !! | TTCATTTGTATCGAATTATT+AGG | - | chr3.4:59120852-59120871 | MS.gene04526:intron | 20.0% |
| !! | TTCTTCTCTAATAAAAAATG+AGG | + | chr3.4:59122351-59122370 | None:intergenic | 20.0% |
| !!! | ATTTTTATGTGAATTAATGC+AGG | - | chr3.4:59118756-59118775 | MS.gene04526:intron | 20.0% |
| !!! | CAATCAAGACTTTTTATTAA+AGG | + | chr3.4:59119903-59119922 | None:intergenic | 20.0% |
| !!! | GAGTTTATTTAGTATTTTAC+TGG | - | chr3.4:59122828-59122847 | MS.gene04526:intron | 20.0% |
| !!! | GTTTCTTTTTTTGAAATATC+AGG | - | chr3.4:59122180-59122199 | MS.gene04526:intron | 20.0% |
| !!! | TAATGGATTCTTTTGTATAA+TGG | + | chr3.4:59119801-59119820 | None:intergenic | 20.0% |
| !!! | TCATAGATTTTGATCAATTA+CGG | + | chr3.4:59121920-59121939 | None:intergenic | 20.0% |
| !!! | TTAAGATCATTATTTTGTGT+TGG | - | chr3.4:59118897-59118916 | MS.gene04526:intron | 20.0% |
| ! | AAAAGGAAGAAGTCAATAAA+AGG | - | chr3.4:59121689-59121708 | MS.gene04526:intron | 25.0% |
| ! | AAAGGAAGAAGTCAATAAAA+GGG | - | chr3.4:59121690-59121709 | MS.gene04526:intron | 25.0% |
| ! | AAATAGTTTGAATTCTCAGT+TGG | + | chr3.4:59120270-59120289 | None:intergenic | 25.0% |
| ! | AAATTGCAAATACACCATTA+AGG | + | chr3.4:59120047-59120066 | None:intergenic | 25.0% |
| ! | AACACATATTTAAGTCTATC+AGG | - | chr3.4:59120664-59120683 | MS.gene04526:CDS | 25.0% |
| ! | AATAGCACAATAGAGAAAAA+TGG | - | chr3.4:59119548-59119567 | MS.gene04526:intron | 25.0% |
| ! | AATGTATATATCTGTTCGAT+AGG | - | chr3.4:59122890-59122909 | MS.gene04526:intron | 25.0% |
| ! | AATTGCAAATACACCATTAA+GGG | + | chr3.4:59120046-59120065 | None:intergenic | 25.0% |
| ! | ACAATCATAAACTATATTGG+CGG | + | chr3.4:59118967-59118986 | None:intergenic | 25.0% |
| ! | AGTGAAAAGAAGCAAAATAA+CGG | + | chr3.4:59120701-59120720 | None:intergenic | 25.0% |
| ! | ATAGGAGTAGATAACTAATT+AGG | - | chr3.4:59121369-59121388 | MS.gene04526:intron | 25.0% |
| ! | ATATTCTGATAGATGTTGAT+AGG | - | chr3.4:59121351-59121370 | MS.gene04526:intron | 25.0% |
| ! | ATCTTGTTGGTATTATTTGA+TGG | - | chr3.4:59122316-59122335 | MS.gene04526:intron | 25.0% |
| ! | CAGAATATGCTTTAGTAAAA+TGG | + | chr3.4:59121339-59121358 | None:intergenic | 25.0% |
| ! | CATTTGTATCGAATTATTAG+GGG | - | chr3.4:59120854-59120873 | MS.gene04526:intron | 25.0% |
| ! | GACACAATCATAAACTATAT+TGG | + | chr3.4:59118970-59118989 | None:intergenic | 25.0% |
| ! | GACTATCAAGATTTGTAATT+TGG | - | chr3.4:59119195-59119214 | MS.gene04526:intron | 25.0% |
| ! | GCTTTAGTAAAATGGAAAAA+AGG | + | chr3.4:59121331-59121350 | None:intergenic | 25.0% |
| ! | GTATTGAATTGAGATTTCAA+AGG | + | chr3.4:59120019-59120038 | None:intergenic | 25.0% |
| ! | TAAAGAAAATACATGCATAC+TGG | + | chr3.4:59122481-59122500 | None:intergenic | 25.0% |
| ! | TAGATCAAGATAGAGAAAAA+CGG | + | chr3.4:59118596-59118615 | None:intergenic | 25.0% |
| ! | TCAAAATCTCTGTATATTGT+TGG | - | chr3.4:59120379-59120398 | MS.gene04526:CDS | 25.0% |
| ! | TCTTGTTGGTATTATTTGAT+GGG | - | chr3.4:59122317-59122336 | MS.gene04526:intron | 25.0% |
| ! | TGATACATATGGTTTAAAAG+AGG | + | chr3.4:59122074-59122093 | None:intergenic | 25.0% |
| !! | AAGGTTGTAAAATTTTGTAG+AGG | - | chr3.4:59119416-59119435 | MS.gene04526:intron | 25.0% |
| !! | AATTGTGGAAAAGTTTTCAT+TGG | + | chr3.4:59121652-59121671 | None:intergenic | 25.0% |
| !! | ACTGAGAATTCAAACTATTT+TGG | - | chr3.4:59120270-59120289 | MS.gene04526:intron | 25.0% |
| !! | ATACTGGTTAAAGAAAATAC+AGG | + | chr3.4:59122465-59122484 | None:intergenic | 25.0% |
| !! | ATCAACAGGATTTTTATCAA+TGG | - | chr3.4:59121161-59121180 | MS.gene04526:intron | 25.0% |
| !! | ATGGATTCATGAGATTTTAT+AGG | - | chr3.4:59119257-59119276 | MS.gene04526:intron | 25.0% |
| !! | ATTTGAACATGTGTTTTCTT+TGG | + | chr3.4:59121286-59121305 | None:intergenic | 25.0% |
| !! | GTATTGTAATAGGTCTTTTT+GGG | - | chr3.4:59120325-59120344 | MS.gene04526:intron | 25.0% |
| !! | TAAAAACATTACCTTTGGAA+CGG | + | chr3.4:59122145-59122164 | None:intergenic | 25.0% |
| !! | TGTATTTTCTTTAACCAGTA+TGG | - | chr3.4:59122464-59122483 | MS.gene04526:intron | 25.0% |
| !! | TTCTCTTTAGTTAGTCATTT+TGG | - | chr3.4:59119014-59119033 | MS.gene04526:intron | 25.0% |
| !!! | ATTTTGATGTTCAGATTGAT+GGG | - | chr3.4:59118824-59118843 | MS.gene04526:intron | 25.0% |
| !!! | TAGACATTTTTTAAGTTGTG+AGG | - | chr3.4:59119846-59119865 | MS.gene04526:intron | 25.0% |
| !!! | TATTTTGATGTTCAGATTGA+TGG | - | chr3.4:59118823-59118842 | MS.gene04526:intron | 25.0% |
| !!! | TGTTATTTCGTTAGTCAATT+TGG | - | chr3.4:59119042-59119061 | MS.gene04526:intron | 25.0% |
| AAACAAAAGAGACATTTAGG+GGG | - | chr3.4:59119073-59119092 | MS.gene04526:intron | 30.0% | |
| AAACGACACTCATTATGAAA+TGG | - | chr3.4:59122790-59122809 | MS.gene04526:intron | 30.0% | |
| AACCATATGTATCACGTAAT+CGG | - | chr3.4:59122080-59122099 | MS.gene04526:intron | 30.0% | |
| AAGGAAGAAGTCAATAAAAG+GGG | - | chr3.4:59121691-59121710 | MS.gene04526:intron | 30.0% | |
| AAGTTCAAATGAATCTCTGA+TGG | - | chr3.4:59121103-59121122 | MS.gene04526:intron | 30.0% | |
| AATGCAATTGAGAAGATATG+TGG | + | chr3.4:59119346-59119365 | None:intergenic | 30.0% | |
| ACAATTCATGGTAAGTCAAT+TGG | - | chr3.4:59121666-59121685 | MS.gene04526:intron | 30.0% | |
| ACATATTTAAGTCTATCAGG+TGG | - | chr3.4:59120667-59120686 | MS.gene04526:CDS | 30.0% | |
| AGTTCAAATGAATCTCTGAT+GGG | - | chr3.4:59121104-59121123 | MS.gene04526:intron | 30.0% | |
| ATCCATGATCATAATCTTGT+TGG | - | chr3.4:59122303-59122322 | MS.gene04526:intron | 30.0% | |
| ATCGAATTATTAGGGGAAAA+GGG | - | chr3.4:59120861-59120880 | MS.gene04526:intron | 30.0% | |
| ATTGCAAATACACCATTAAG+GGG | + | chr3.4:59120045-59120064 | None:intergenic | 30.0% | |
| CAAACAAAAGAGACATTTAG+GGG | - | chr3.4:59119072-59119091 | MS.gene04526:intron | 30.0% | |
| GAGAATAAAATAGAAGACGA+AGG | - | chr3.4:59121805-59121824 | MS.gene04526:intron | 30.0% | |
| GAGTTAGTAATGTGAAATGA+GGG | - | chr3.4:59120229-59120248 | MS.gene04526:intron | 30.0% | |
| GATGAAAAATTGTGAACCAT+TGG | + | chr3.4:59121205-59121224 | None:intergenic | 30.0% | |
| GCAAACAAAAGAGACATTTA+GGG | - | chr3.4:59119071-59119090 | MS.gene04526:intron | 30.0% | |
| TACCAACAAGATTATGATCA+TGG | + | chr3.4:59122308-59122327 | None:intergenic | 30.0% | |
| TACGGAAACATGTAAAATGT+TGG | + | chr3.4:59121902-59121921 | None:intergenic | 30.0% | |
| TAGGAAATGGATGAAATGTT+AGG | + | chr3.4:59120732-59120751 | None:intergenic | 30.0% | |
| TATATATCTGTTCGATAGGT+TGG | - | chr3.4:59122894-59122913 | MS.gene04526:intron | 30.0% | |
| TATCGAATTATTAGGGGAAA+AGG | - | chr3.4:59120860-59120879 | MS.gene04526:intron | 30.0% | |
| TGCAAACAAAAGAGACATTT+AGG | - | chr3.4:59119070-59119089 | MS.gene04526:intron | 30.0% | |
| TGCACCACTTATTATAAAAG+AGG | + | chr3.4:59121984-59122003 | None:intergenic | 30.0% | |
| TGTATGTCATGTCATGATTA+TGG | + | chr3.4:59122428-59122447 | None:intergenic | 30.0% | |
| TTATTAAAGGCAACGAAATC+CGG | + | chr3.4:59119890-59119909 | None:intergenic | 30.0% | |
| TTCTCTTTATATAGCAATGC+TGG | + | chr3.4:59121477-59121496 | None:intergenic | 30.0% | |
| TTGTTCAGTCTCATATTTAC+CGG | - | chr3.4:59122250-59122269 | MS.gene04526:intron | 30.0% | |
| TTTGAATTTGCAATTGTGTC+TGG | - | chr3.4:59118710-59118729 | MS.gene04526:intron | 30.0% | |
| ! | AAGATTTGGAAGGACTTTTA+TGG | - | chr3.4:59119238-59119257 | MS.gene04526:intron | 30.0% |
| ! | AATTGACTTACCATGAATTG+TGG | + | chr3.4:59121667-59121686 | None:intergenic | 30.0% |
| ! | AGAAAGTATGAAAAGTCTCA+AGG | - | chr3.4:59119712-59119731 | MS.gene04526:intron | 30.0% |
| ! | CGTATTGTAATAGGTCTTTT+TGG | - | chr3.4:59120324-59120343 | MS.gene04526:intron | 30.0% |
| ! | GAAAACTTTTCCACAATTCA+TGG | - | chr3.4:59121654-59121673 | MS.gene04526:intron | 30.0% |
| ! | TTTAACCTCAATGGTCATTT+TGG | - | chr3.4:59118922-59118941 | MS.gene04526:intron | 30.0% |
| ! | TTTTTATCAATGGCAAATGC+TGG | - | chr3.4:59121171-59121190 | MS.gene04526:intron | 30.0% |
| !! | AAAAACATTACCTTTGGAAC+GGG | + | chr3.4:59122144-59122163 | None:intergenic | 30.0% |
| !! | AAGCGAAACTCATTTTGAAA+CGG | + | chr3.4:59122555-59122574 | None:intergenic | 30.0% |
| !!! | TTCATAATGAGTGTCGTTTT+AGG | + | chr3.4:59122789-59122808 | None:intergenic | 30.0% |
| !!! | TTGTCATTTTCTGTATCAAC+AGG | - | chr3.4:59121147-59121166 | MS.gene04526:intron | 30.0% |
| !!! | TTTTGAAATATCAGGTGCAT+TGG | - | chr3.4:59122188-59122207 | MS.gene04526:intron | 30.0% |
| AAATGGAAAAAAGGAGACTG+TGG | + | chr3.4:59121322-59121341 | None:intergenic | 35.0% | |
| AACAAAAGAGACATTTAGGG+GGG | - | chr3.4:59119074-59119093 | MS.gene04526:intron | 35.0% | |
| AATTATAACACCCGTTCCAA+AGG | - | chr3.4:59122131-59122150 | MS.gene04526:intron | 35.0% | |
| AATTGTGAACCATTGGTATC+AGG | + | chr3.4:59121198-59121217 | None:intergenic | 35.0% | |
| ACCATATGTATCACGTAATC+GGG | - | chr3.4:59122081-59122100 | MS.gene04526:intron | 35.0% | |
| ACTAACTAAAGAGAAACTCG+AGG | + | chr3.4:59119009-59119028 | None:intergenic | 35.0% | |
| AGACAGATAGAACATTTACC+TGG | + | chr3.4:59121056-59121075 | None:intergenic | 35.0% | |
| AGTCTCATATTTACCGGAAA+GGG | - | chr3.4:59122256-59122275 | MS.gene04526:intron | 35.0% | |
| CATGGTAAGTCAATTGGAAA+AGG | - | chr3.4:59121672-59121691 | MS.gene04526:intron | 35.0% | |
| CGAGTTAGTAATGTGAAATG+AGG | - | chr3.4:59120228-59120247 | MS.gene04526:intron | 35.0% | |
| GAATCTCAATTGAATACCAC+CGG | - | chr3.4:59119868-59119887 | MS.gene04526:intron | 35.0% | |
| GACACTCATTATGAAATGGT+GGG | - | chr3.4:59122794-59122813 | MS.gene04526:intron | 35.0% | |
| GCGTTAACAAATTTGAGTCA+GGG | + | chr3.4:59122218-59122237 | None:intergenic | 35.0% | |
| GGAAACCTGAATAAGAGATA+GGG | + | chr3.4:59118575-59118594 | None:intergenic | 35.0% | |
| GTGTGATATAAGTGAGAAAG+AGG | - | chr3.4:59122048-59122067 | MS.gene04526:intron | 35.0% | |
| GTTCAAATGAATCTCTGATG+GGG | - | chr3.4:59121105-59121124 | MS.gene04526:intron | 35.0% | |
| GTTTACAAGATTGAAGCTGA+AGG | - | chr3.4:59122964-59122983 | MS.gene04526:intron | 35.0% | |
| TAAAGCTAGGGATAATCCTA+TGG | + | chr3.4:59120932-59120951 | None:intergenic | 35.0% | |
| TCGAATTATTAGGGGAAAAG+GGG | - | chr3.4:59120862-59120881 | MS.gene04526:intron | 35.0% | |
| TGAATTAATGCAGGCAAAGA+AGG | - | chr3.4:59118765-59118784 | MS.gene04526:intron | 35.0% | |
| TGAGAAAAAAAATGTGGCGT+AGG | - | chr3.4:59121947-59121966 | MS.gene04526:intron | 35.0% | |
| TGCGTTAACAAATTTGAGTC+AGG | + | chr3.4:59122219-59122238 | None:intergenic | 35.0% | |
| TTGCAAATACACCATTAAGG+GGG | + | chr3.4:59120044-59120063 | None:intergenic | 35.0% | |
| TTTACACATGGCAATGGAAT+GGG | - | chr3.4:59120969-59120988 | MS.gene04526:intron | 35.0% | |
| TTTGAAGGAAGTGACAAACA+AGG | - | chr3.4:59118798-59118817 | MS.gene04526:intron | 35.0% | |
| ! | CAAAAGGGTACATCAAAACA+AGG | + | chr3.4:59120437-59120456 | None:intergenic | 35.0% |
| ! | GAGAGCATAGCGAATTAAAA+AGG | - | chr3.4:59121624-59121643 | MS.gene04526:intron | 35.0% |
| ! | GAGGCCTCTTTTATAATAAG+TGG | - | chr3.4:59121977-59121996 | MS.gene04526:intron | 35.0% |
| ! | GAGGCTAGTTCTTCTAATTA+AGG | - | chr3.4:59120142-59120161 | MS.gene04526:intron | 35.0% |
| ! | GTAGTGTGCAGAGTATTAAT+TGG | + | chr3.4:59122659-59122678 | None:intergenic | 35.0% |
| ! | TGAAAAGTGTGCGTTTATAG+AGG | - | chr3.4:59120123-59120142 | MS.gene04526:intron | 35.0% |
| ! | TGTGCAGAGTATTAATTGGA+GGG | + | chr3.4:59122655-59122674 | None:intergenic | 35.0% |
| ! | TTTTACACATGGCAATGGAA+TGG | - | chr3.4:59120968-59120987 | MS.gene04526:intron | 35.0% |
| !! | GATTTTGAAAACCTTACCTG+CGG | + | chr3.4:59120367-59120386 | None:intergenic | 35.0% |
| !! | GCATTCTTTAAGACCAATAC+TGG | - | chr3.4:59119361-59119380 | MS.gene04526:intron | 35.0% |
| !! | GTGTTGGATTTTAACCTCAA+TGG | - | chr3.4:59118913-59118932 | MS.gene04526:intron | 35.0% |
| !!! | AAGGCATGTTGTTTTTGGAA+AGG | - | chr3.4:59122921-59122940 | MS.gene04526:intron | 35.0% |
| !!! | GAAACTCATTTTGAAACGGA+GGG | + | chr3.4:59122551-59122570 | None:intergenic | 35.0% |
| !!! | TGTTTTTGGAAAGGTGCTTT+CGG | - | chr3.4:59122930-59122949 | MS.gene04526:intron | 35.0% |
| AACTTCAAGCTAAAGCACAC+TGG | - | chr3.4:59121029-59121048 | MS.gene04526:intron | 40.0% | |
| AAGAACCGATGACTATCAGT+TGG | - | chr3.4:59120613-59120632 | MS.gene04526:CDS | 40.0% | |
| AAGAAGTCAATAAAAGGGGC+TGG | - | chr3.4:59121695-59121714 | MS.gene04526:intron | 40.0% | |
| AAGAGGCTTTCCAGATTTAC+CGG | + | chr3.4:59120889-59120908 | None:intergenic | 40.0% | |
| AAGGTTGTGATTGCTGATAG+TGG | - | chr3.4:59123012-59123031 | MS.gene04526:CDS | 40.0% | |
| ACAAAGGTAGCTCATTCCAT+AGG | - | chr3.4:59120913-59120932 | MS.gene04526:intron | 40.0% | |
| ACAAGCCAACTGATAGTCAT+CGG | + | chr3.4:59120621-59120640 | None:intergenic | 40.0% | |
| AGAAGTCAATAAAAGGGGCT+GGG | - | chr3.4:59121696-59121715 | MS.gene04526:intron | 40.0% | |
| AGACCTATTACAATACGACC+TGG | + | chr3.4:59120321-59120340 | None:intergenic | 40.0% | |
| AGAGACCAAAATGACCATTG+AGG | + | chr3.4:59118930-59118949 | None:intergenic | 40.0% | |
| AGTGGTGCAAGATGATATTG+CGG | - | chr3.4:59121995-59122014 | MS.gene04526:intron | 40.0% | |
| ATCGGGAACAAAATGGCAAA+AGG | - | chr3.4:59122098-59122117 | MS.gene04526:intron | 40.0% | |
| ATGGGCGGAGAATCAATTTA+CGG | - | chr3.4:59120987-59121006 | MS.gene04526:intron | 40.0% | |
| ATTCAATACACCCCCCTTAA+TGG | - | chr3.4:59120030-59120049 | MS.gene04526:intron | 40.0% | |
| CAGTCTCATATTTACCGGAA+AGG | - | chr3.4:59122255-59122274 | MS.gene04526:intron | 40.0% | |
| CATGTGTAAAATCACCTCCT+TGG | + | chr3.4:59120959-59120978 | None:intergenic | 40.0% | |
| CGACACTCATTATGAAATGG+TGG | - | chr3.4:59122793-59122812 | MS.gene04526:intron | 40.0% | |
| CGGAAACCTGAATAAGAGAT+AGG | + | chr3.4:59118576-59118595 | None:intergenic | 40.0% | |
| CTCCTTGGATCATAAAGCTA+GGG | + | chr3.4:59120944-59120963 | None:intergenic | 40.0% | |
| CTCTTATCACTGTTCCTCTT+CGG | - | chr3.4:59118547-59118566 | MS.gene04526:CDS | 40.0% | |
| CTTATATCACACGTTGTCGT+AGG | + | chr3.4:59122040-59122059 | None:intergenic | 40.0% | |
| CTTGGCAATCAATTGTCTGA+AGG | - | chr3.4:59119673-59119692 | MS.gene04526:intron | 40.0% | |
| GAAGCTGAAGGAAATCAAAG+TGG | - | chr3.4:59122976-59122995 | MS.gene04526:intron | 40.0% | |
| GACCTATTACAATACGACCT+GGG | + | chr3.4:59120320-59120339 | None:intergenic | 40.0% | |
| GAGCTACCTTTGTAATGAAG+AGG | + | chr3.4:59120906-59120925 | None:intergenic | 40.0% | |
| GGAAAGCCTCTTCATTACAA+AGG | - | chr3.4:59120897-59120916 | MS.gene04526:intron | 40.0% | |
| TATCACTGTCTGAGCTTATG+AGG | - | chr3.4:59120771-59120790 | MS.gene04526:intron | 40.0% | |
| TCACGTAATCGGGAACAAAA+TGG | - | chr3.4:59122091-59122110 | MS.gene04526:intron | 40.0% | |
| TCCCGATTACGTGATACATA+TGG | + | chr3.4:59122085-59122104 | None:intergenic | 40.0% | |
| TGATGTTCAGATTGATGGGA+AGG | - | chr3.4:59118828-59118847 | MS.gene04526:intron | 40.0% | |
| TGCAAATACACCATTAAGGG+GGG | + | chr3.4:59120043-59120062 | None:intergenic | 40.0% | |
| TTGCACAACTATTCCCTTTC+CGG | + | chr3.4:59122272-59122291 | None:intergenic | 40.0% | |
| ! | AAAACCTTACCTGCGGTTTT+TGG | + | chr3.4:59120360-59120379 | None:intergenic | 40.0% |
| ! | CAAGGAGGTGATTTTACACA+TGG | - | chr3.4:59120957-59120976 | MS.gene04526:intron | 40.0% |
| ! | CTCGGAAGTTTTCTGCAAAA+GGG | + | chr3.4:59120452-59120471 | None:intergenic | 40.0% |
| ! | GGTGATTTTACACATGGCAA+TGG | - | chr3.4:59120963-59120982 | MS.gene04526:intron | 40.0% |
| ! | GTGTGCAGAGTATTAATTGG+AGG | + | chr3.4:59122656-59122675 | None:intergenic | 40.0% |
| ! | TATCTGTTCGATAGGTTGGA+TGG | - | chr3.4:59122898-59122917 | MS.gene04526:intron | 40.0% |
| !! | ACTATCAGTTGGCTTGTAAC+TGG | - | chr3.4:59120624-59120643 | MS.gene04526:CDS | 40.0% |
| !! | ATCCCTAGCTTTATGATCCA+AGG | - | chr3.4:59120939-59120958 | MS.gene04526:intron | 40.0% |
| !! | GGTCATTTTGGTCTCTGAAT+GGG | - | chr3.4:59118934-59118953 | MS.gene04526:intron | 40.0% |
| !! | TGGTCATTTTGGTCTCTGAA+TGG | - | chr3.4:59118933-59118952 | MS.gene04526:intron | 40.0% |
| !!! | CGAAACTCATTTTGAAACGG+AGG | + | chr3.4:59122552-59122571 | None:intergenic | 40.0% |
| !!! | GATGGAAGGCATGTTGTTTT+TGG | - | chr3.4:59122916-59122935 | MS.gene04526:intron | 40.0% |
| !!! | GTTTTTGGAAAGGTGCTTTC+GGG | - | chr3.4:59122931-59122950 | MS.gene04526:intron | 40.0% |
| AAGACAGTTCCAAAAACCGC+AGG | - | chr3.4:59120348-59120367 | MS.gene04526:CDS | 45.0% | |
| AATGCTGGTCCTGATACCAA+TGG | - | chr3.4:59121186-59121205 | MS.gene04526:intron | 45.0% | |
| AATTCGCTATGCTCTCGTGA+TGG | + | chr3.4:59121620-59121639 | None:intergenic | 45.0% | |
| ACTGCATGCAGTGGACATAT+AGG | + | chr3.4:59121396-59121415 | None:intergenic | 45.0% | |
| AGCAATCACAACCTTGCTCT+TGG | + | chr3.4:59123007-59123026 | None:intergenic | 45.0% | |
| AGTTCCAAAAACCGCAGGTA+AGG | - | chr3.4:59120353-59120372 | MS.gene04526:CDS | 45.0% | |
| CCTCCTTGGATCATAAAGCT+AGG | + | chr3.4:59120945-59120964 | None:intergenic | 45.0% | |
| CGGAACCCTATCTCTTATTC+AGG | - | chr3.4:59118567-59118586 | MS.gene04526:CDS | 45.0% | |
| GAAGGCGAAAGAGGATTTGA+AGG | - | chr3.4:59118783-59118802 | MS.gene04526:intron | 45.0% | |
| GCAATCACAACCTTGCTCTT+GGG | + | chr3.4:59123006-59123025 | None:intergenic | 45.0% | |
| TAAGAGATAGGGTTCCGAAG+AGG | + | chr3.4:59118564-59118583 | None:intergenic | 45.0% | |
| TCACAACTGTGACAACTAGC+TGG | - | chr3.4:59121223-59121242 | MS.gene04526:CDS | 45.0% | |
| TGCCCAGGTCGTATTGTAAT+AGG | - | chr3.4:59120315-59120334 | MS.gene04526:intron | 45.0% | |
| TTAAAGGCAACGAAATCCGG+TGG | + | chr3.4:59119887-59119906 | None:intergenic | 45.0% | |
| TTATTAGGGGAAAAGGGGAC+CGG | - | chr3.4:59120867-59120886 | MS.gene04526:intron | 45.0% | |
| ! | AGACATTTAGGGGGGTGTAT+TGG | - | chr3.4:59119082-59119101 | MS.gene04526:intron | 45.0% |
| ! | GCTCGGAAGTTTTCTGCAAA+AGG | + | chr3.4:59120453-59120472 | None:intergenic | 45.0% |
| ! | TGTTCGATAGGTTGGATGGA+AGG | - | chr3.4:59122902-59122921 | MS.gene04526:intron | 45.0% |
| ! | TTAGGGGGGTGTATTGGATT+AGG | - | chr3.4:59119088-59119107 | MS.gene04526:intron | 45.0% |
| !! | CAGTTGGCTTGTAACTGGAT+AGG | - | chr3.4:59120629-59120648 | MS.gene04526:CDS | 45.0% |
| !! | CCTAGCTTTATGATCCAAGG+AGG | - | chr3.4:59120942-59120961 | MS.gene04526:intron | 45.0% |
| AACTTCCGAGCTCTTTGCAC+AGG | - | chr3.4:59120462-59120481 | MS.gene04526:intron | 50.0% | |
| AAGCTAAAGCACACTGGTCC+AGG | - | chr3.4:59121035-59121054 | MS.gene04526:intron | 50.0% | |
| ACACATGGCAATGGAATGGG+CGG | - | chr3.4:59120972-59120991 | MS.gene04526:intron | 50.0% | |
| AGTCAATAAAAGGGGCTGGG+TGG | - | chr3.4:59121699-59121718 | MS.gene04526:intron | 50.0% | |
| ATGTGGCGTAGGTGAGAAAG+AGG | - | chr3.4:59121958-59121977 | MS.gene04526:intron | 50.0% | |
| CAGATTGATGGGAAGGATGC+AGG | - | chr3.4:59118835-59118854 | MS.gene04526:intron | 50.0% | |
| CGAAAAATAGCAGCAGCTCG+TGG | - | chr3.4:59119630-59119649 | MS.gene04526:intron | 50.0% | |
| GAAAAGGGGACCGGTAAATC+TGG | - | chr3.4:59120876-59120895 | MS.gene04526:intron | 50.0% | |
| GTTGTGATTCTTGTCTGCCC+AGG | - | chr3.4:59120300-59120319 | MS.gene04526:intron | 50.0% | |
| TGCGTCAAAACTGCATGCAG+TGG | + | chr3.4:59121405-59121424 | None:intergenic | 50.0% | |
| !! | TGGAAAGGTGCTTTCGGGAA+TGG | - | chr3.4:59122936-59122955 | MS.gene04526:intron | 50.0% |
| AAGTGGCACTCCCAAGAGCA+AGG | - | chr3.4:59122993-59123012 | MS.gene04526:CDS | 55.0% | |
| GCAGGCAAAGAAGGCGAAAG+AGG | - | chr3.4:59118774-59118793 | MS.gene04526:intron | 55.0% | |
| GCTCACCTGTGCAAAGAGCT+CGG | + | chr3.4:59120470-59120489 | None:intergenic | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.4 | gene | 59118523 | 59123050 | 59118523 | ID=MS.gene04526 |
| chr3.4 | mRNA | 59118523 | 59123050 | 59118523 | ID=MS.gene04526.t1;Parent=MS.gene04526 |
| chr3.4 | exon | 59122985 | 59123050 | 59122985 | ID=MS.gene04526.t1.exon1;Parent=MS.gene04526.t1 |
| chr3.4 | CDS | 59122985 | 59123050 | 59122985 | ID=cds.MS.gene04526.t1;Parent=MS.gene04526.t1 |
| chr3.4 | exon | 59122717 | 59122795 | 59122717 | ID=MS.gene04526.t1.exon2;Parent=MS.gene04526.t1 |
| chr3.4 | CDS | 59122717 | 59122795 | 59122717 | ID=cds.MS.gene04526.t1;Parent=MS.gene04526.t1 |
| chr3.4 | exon | 59121204 | 59121251 | 59121204 | ID=MS.gene04526.t1.exon3;Parent=MS.gene04526.t1 |
| chr3.4 | CDS | 59121204 | 59121251 | 59121204 | ID=cds.MS.gene04526.t1;Parent=MS.gene04526.t1 |
| chr3.4 | exon | 59121090 | 59121113 | 59121090 | ID=MS.gene04526.t1.exon4;Parent=MS.gene04526.t1 |
| chr3.4 | CDS | 59121090 | 59121113 | 59121090 | ID=cds.MS.gene04526.t1;Parent=MS.gene04526.t1 |
| chr3.4 | exon | 59120517 | 59120699 | 59120517 | ID=MS.gene04526.t1.exon5;Parent=MS.gene04526.t1 |
| chr3.4 | CDS | 59120517 | 59120699 | 59120517 | ID=cds.MS.gene04526.t1;Parent=MS.gene04526.t1 |
| chr3.4 | exon | 59120329 | 59120404 | 59120329 | ID=MS.gene04526.t1.exon6;Parent=MS.gene04526.t1 |
| chr3.4 | CDS | 59120329 | 59120404 | 59120329 | ID=cds.MS.gene04526.t1;Parent=MS.gene04526.t1 |
| chr3.4 | exon | 59118523 | 59118661 | 59118523 | ID=MS.gene04526.t1.exon7;Parent=MS.gene04526.t1 |
| chr3.4 | CDS | 59118523 | 59118661 | 59118523 | ID=cds.MS.gene04526.t1;Parent=MS.gene04526.t1 |
| Gene Sequence |
| Protein sequence |
