Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene04515.t1 | XP_013460238.1 | 98.5 | 204 | 2 | 1 | 1 | 204 | 1 | 203 | 6.80E-109 | 403.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene04515.t1 | Q9SP02 | 87.7 | 204 | 25 | 0 | 1 | 204 | 1 | 204 | 1.5e-101 | 370.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene04515.t1 | I3S3K3 | 98.5 | 204 | 2 | 1 | 1 | 204 | 1 | 203 | 4.9e-109 | 403.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene050281 | MS.gene04515 | PPI |
| MS.gene22872 | MS.gene04515 | PPI |
| MS.gene025980 | MS.gene04515 | PPI |
| MS.gene68153 | MS.gene04515 | PPI |
| MS.gene04515 | MS.gene003532 | PPI |
| MS.gene23546 | MS.gene04515 | PPI |
| MS.gene014216 | MS.gene04515 | PPI |
| MS.gene052269 | MS.gene04515 | PPI |
| MS.gene063104 | MS.gene04515 | PPI |
| MS.gene057696 | MS.gene04515 | PPI |
| MS.gene063787 | MS.gene04515 | PPI |
| MS.gene23663 | MS.gene04515 | PPI |
| MS.gene051153 | MS.gene04515 | PPI |
| MS.gene063029 | MS.gene04515 | PPI |
| MS.gene052266 | MS.gene04515 | PPI |
| MS.gene04515 | MS.gene007179 | PPI |
| MS.gene019366 | MS.gene04515 | PPI |
| MS.gene024514 | MS.gene04515 | PPI |
| MS.gene61767 | MS.gene04515 | PPI |
| MS.gene28963 | MS.gene04515 | PPI |
| MS.gene68752 | MS.gene04515 | PPI |
| MS.gene88451 | MS.gene04515 | PPI |
| MS.gene050574 | MS.gene04515 | PPI |
| MS.gene39668 | MS.gene04515 | PPI |
| MS.gene003412 | MS.gene04515 | PPI |
| MS.gene28703 | MS.gene04515 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene04515.t1 | MTR_3g463900 | 98.529 | 204 | 2 | 1 | 1 | 204 | 1 | 203 | 3.62e-146 | 405 |
| MS.gene04515.t1 | MTR_3g070500 | 83.523 | 176 | 29 | 0 | 27 | 202 | 56 | 231 | 2.80e-108 | 310 |
| MS.gene04515.t1 | MTR_4g075290 | 68.235 | 170 | 54 | 0 | 33 | 202 | 2 | 171 | 7.97e-84 | 246 |
| MS.gene04515.t1 | MTR_7g116340 | 69.461 | 167 | 51 | 0 | 36 | 202 | 5 | 171 | 2.16e-83 | 245 |
| MS.gene04515.t1 | MTR_4g073650 | 59.296 | 199 | 79 | 2 | 7 | 203 | 17 | 215 | 3.95e-81 | 241 |
| MS.gene04515.t1 | MTR_3g070500 | 84.211 | 133 | 21 | 0 | 27 | 159 | 56 | 188 | 3.99e-81 | 239 |
| MS.gene04515.t1 | MTR_3g117750 | 68.263 | 167 | 53 | 0 | 36 | 202 | 13 | 179 | 7.25e-80 | 236 |
| MS.gene04515.t1 | MTR_1g085560 | 67.598 | 179 | 48 | 3 | 29 | 204 | 78 | 249 | 5.18e-78 | 234 |
| MS.gene04515.t1 | MTR_7g110980 | 60.317 | 189 | 63 | 3 | 21 | 204 | 78 | 259 | 4.64e-75 | 227 |
| MS.gene04515.t1 | MTR_1g117010 | 64.407 | 177 | 52 | 3 | 32 | 204 | 74 | 243 | 1.08e-72 | 220 |
| MS.gene04515.t1 | MTR_1g117010 | 64.407 | 177 | 52 | 3 | 32 | 204 | 74 | 243 | 1.08e-72 | 220 |
| MS.gene04515.t1 | MTR_7g095750 | 65.868 | 167 | 56 | 1 | 37 | 202 | 9 | 175 | 8.55e-71 | 227 |
| MS.gene04515.t1 | MTR_8g079690 | 60.355 | 169 | 65 | 2 | 36 | 202 | 5 | 173 | 1.88e-64 | 203 |
| MS.gene04515.t1 | MTR_3g070500 | 84.259 | 108 | 17 | 0 | 27 | 134 | 56 | 163 | 8.58e-64 | 195 |
| MS.gene04515.t1 | MTR_3g070500 | 84.112 | 107 | 17 | 0 | 27 | 133 | 56 | 162 | 3.15e-63 | 193 |
| MS.gene04515.t1 | MTR_4g086760 | 57.895 | 171 | 68 | 3 | 36 | 203 | 5 | 174 | 2.72e-62 | 196 |
| MS.gene04515.t1 | MTR_4g086760 | 57.895 | 171 | 68 | 3 | 36 | 203 | 5 | 174 | 3.94e-62 | 196 |
| MS.gene04515.t1 | MTR_4g086760 | 57.895 | 171 | 68 | 3 | 36 | 203 | 5 | 174 | 4.60e-62 | 197 |
| MS.gene04515.t1 | MTR_8g040180 | 57.143 | 168 | 68 | 3 | 37 | 202 | 20 | 185 | 9.16e-60 | 185 |
| MS.gene04515.t1 | MTR_3g107660 | 50.847 | 177 | 82 | 2 | 30 | 201 | 1 | 177 | 1.16e-49 | 172 |
| MS.gene04515.t1 | MTR_1g011980 | 52.907 | 172 | 79 | 2 | 31 | 201 | 3 | 173 | 2.43e-49 | 171 |
| MS.gene04515.t1 | MTR_2g085075 | 49.333 | 150 | 63 | 5 | 49 | 196 | 471 | 609 | 2.22e-35 | 131 |
| MS.gene04515.t1 | MTR_7g105220 | 49.624 | 133 | 55 | 4 | 49 | 180 | 19 | 140 | 6.63e-35 | 121 |
| MS.gene04515.t1 | MTR_3g085705 | 48.780 | 123 | 58 | 3 | 68 | 190 | 7 | 124 | 1.45e-31 | 111 |
| MS.gene04515.t1 | MTR_8g036015 | 49.265 | 136 | 57 | 4 | 47 | 181 | 8 | 132 | 4.36e-31 | 111 |
| MS.gene04515.t1 | MTR_5g015500 | 47.761 | 134 | 58 | 4 | 49 | 181 | 314 | 436 | 2.84e-28 | 111 |
| MS.gene04515.t1 | MTR_5g015500 | 47.761 | 134 | 58 | 4 | 49 | 181 | 354 | 476 | 4.45e-28 | 110 |
| MS.gene04515.t1 | MTR_2g023120 | 42.000 | 150 | 64 | 8 | 49 | 190 | 22 | 156 | 8.67e-22 | 92.8 |
| MS.gene04515.t1 | MTR_6g084140 | 37.342 | 158 | 78 | 7 | 49 | 196 | 10 | 156 | 4.41e-19 | 85.1 |
| MS.gene04515.t1 | MTR_6g084140 | 35.443 | 158 | 81 | 5 | 49 | 196 | 27 | 173 | 5.60e-19 | 84.7 |
| MS.gene04515.t1 | MTR_8g442420 | 36.709 | 158 | 79 | 7 | 49 | 196 | 10 | 156 | 6.02e-18 | 81.6 |
| MS.gene04515.t1 | MTR_1g094065 | 32.895 | 152 | 83 | 7 | 49 | 198 | 89 | 223 | 2.05e-13 | 67.0 |
| MS.gene04515.t1 | MTR_2g461260 | 28.846 | 156 | 79 | 6 | 49 | 182 | 92 | 237 | 4.10e-11 | 61.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene04515.t1 | AT2G29960 | 86.765 | 204 | 24 | 1 | 1 | 204 | 1 | 201 | 8.75e-129 | 361 |
| MS.gene04515.t1 | AT2G29960 | 86.765 | 204 | 24 | 1 | 1 | 204 | 1 | 201 | 8.75e-129 | 361 |
| MS.gene04515.t1 | AT5G58710 | 90.761 | 184 | 17 | 0 | 21 | 204 | 21 | 204 | 1.86e-124 | 350 |
| MS.gene04515.t1 | AT2G29960 | 83.333 | 204 | 21 | 2 | 1 | 204 | 1 | 191 | 2.35e-120 | 339 |
| MS.gene04515.t1 | AT3G55920 | 69.444 | 216 | 47 | 1 | 8 | 204 | 13 | 228 | 2.22e-104 | 300 |
| MS.gene04515.t1 | AT4G38740 | 70.060 | 167 | 50 | 0 | 36 | 202 | 5 | 171 | 8.20e-85 | 248 |
| MS.gene04515.t1 | AT2G21130 | 70.659 | 167 | 49 | 0 | 36 | 202 | 6 | 172 | 1.97e-84 | 248 |
| MS.gene04515.t1 | AT2G16600 | 70.060 | 167 | 50 | 0 | 36 | 202 | 6 | 172 | 6.86e-84 | 246 |
| MS.gene04515.t1 | AT4G34960 | 61.500 | 200 | 72 | 3 | 5 | 203 | 21 | 216 | 8.64e-83 | 245 |
| MS.gene04515.t1 | AT3G56070 | 68.862 | 167 | 52 | 0 | 36 | 202 | 5 | 171 | 3.66e-82 | 242 |
| MS.gene04515.t1 | AT3G56070 | 68.862 | 167 | 52 | 0 | 36 | 202 | 5 | 171 | 3.66e-82 | 242 |
| MS.gene04515.t1 | AT3G62030 | 63.351 | 191 | 58 | 3 | 19 | 204 | 74 | 257 | 1.11e-79 | 238 |
| MS.gene04515.t1 | AT3G62030 | 66.854 | 178 | 51 | 2 | 28 | 204 | 88 | 258 | 4.58e-79 | 237 |
| MS.gene04515.t1 | AT5G13120 | 62.567 | 187 | 59 | 3 | 22 | 204 | 77 | 256 | 1.72e-78 | 236 |
| MS.gene04515.t1 | AT5G13120 | 62.567 | 187 | 59 | 3 | 22 | 204 | 73 | 252 | 2.05e-78 | 235 |
| MS.gene04515.t1 | AT3G62030 | 66.854 | 178 | 51 | 2 | 28 | 204 | 141 | 311 | 2.15e-78 | 237 |
| MS.gene04515.t1 | AT4G34870 | 65.868 | 167 | 57 | 0 | 36 | 202 | 5 | 171 | 3.87e-76 | 226 |
| MS.gene04515.t1 | AT3G63400 | 63.953 | 172 | 61 | 1 | 31 | 201 | 3 | 174 | 2.55e-69 | 216 |
| MS.gene04515.t1 | AT3G63400 | 63.953 | 172 | 61 | 1 | 31 | 201 | 3 | 174 | 2.12e-67 | 216 |
| MS.gene04515.t1 | AT3G63400 | 63.953 | 172 | 61 | 1 | 31 | 201 | 3 | 174 | 2.12e-67 | 216 |
| MS.gene04515.t1 | AT3G63400 | 63.953 | 172 | 61 | 1 | 31 | 201 | 3 | 174 | 2.12e-67 | 216 |
| MS.gene04515.t1 | AT2G15790 | 61.404 | 171 | 64 | 2 | 35 | 203 | 4 | 174 | 1.66e-66 | 208 |
| MS.gene04515.t1 | AT4G34960 | 61.290 | 155 | 56 | 2 | 5 | 159 | 21 | 171 | 4.42e-63 | 193 |
| MS.gene04515.t1 | AT2G16600 | 58.683 | 167 | 47 | 1 | 36 | 202 | 6 | 150 | 4.73e-62 | 190 |
| MS.gene04515.t1 | AT2G38730 | 57.143 | 168 | 68 | 3 | 37 | 202 | 34 | 199 | 2.60e-59 | 185 |
| MS.gene04515.t1 | AT3G22920 | 52.632 | 171 | 69 | 5 | 36 | 202 | 5 | 167 | 6.95e-50 | 162 |
| MS.gene04515.t1 | AT4G32420 | 51.163 | 172 | 83 | 1 | 31 | 201 | 3 | 174 | 1.29e-46 | 164 |
| MS.gene04515.t1 | AT4G32420 | 51.163 | 172 | 83 | 1 | 31 | 201 | 3 | 174 | 1.29e-46 | 164 |
| MS.gene04515.t1 | AT4G32420 | 51.163 | 172 | 83 | 1 | 31 | 201 | 3 | 174 | 1.29e-46 | 164 |
| MS.gene04515.t1 | AT4G32420 | 51.163 | 172 | 83 | 1 | 31 | 201 | 3 | 174 | 1.29e-46 | 164 |
| MS.gene04515.t1 | AT4G32420 | 51.534 | 163 | 78 | 1 | 31 | 192 | 3 | 165 | 6.15e-44 | 156 |
| MS.gene04515.t1 | AT2G36130 | 49.624 | 133 | 55 | 4 | 49 | 180 | 19 | 140 | 2.51e-35 | 122 |
| MS.gene04515.t1 | AT3G44600 | 52.985 | 134 | 51 | 4 | 49 | 181 | 485 | 607 | 3.17e-35 | 131 |
| MS.gene04515.t1 | AT1G01940 | 50.000 | 136 | 56 | 4 | 47 | 181 | 8 | 132 | 5.47e-32 | 114 |
| MS.gene04515.t1 | AT5G67530 | 43.137 | 153 | 74 | 5 | 49 | 199 | 353 | 494 | 5.43e-28 | 110 |
| MS.gene04515.t1 | AT4G33060 | 43.284 | 134 | 61 | 6 | 49 | 180 | 22 | 142 | 1.81e-25 | 103 |
| MS.gene04515.t1 | AT1G53720 | 36.709 | 158 | 79 | 7 | 49 | 196 | 10 | 156 | 1.88e-18 | 82.4 |
| MS.gene04515.t1 | AT1G53720 | 36.709 | 158 | 79 | 7 | 49 | 196 | 10 | 156 | 2.90e-18 | 82.4 |
Find 46 sgRNAs with CRISPR-Local
Find 235 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGGAACCCTATCTCTTATTC+AGG | 0.273643 | 3.3:-51476717 | MS.gene04515:intron |
| TGAAAACCTGAATAAGAGAT+AGG | 0.339693 | 3.3:+51476711 | None:intergenic |
| AATTGTGAACCATTGGTATC+AGG | 0.357115 | 3.3:+51473967 | None:intergenic |
| TATCGAATTATTAGGGGAAA+AGG | 0.357432 | 3.3:-51474309 | MS.gene04515:intron |
| GAAAAGGGGACCGGTAAATC+TGG | 0.378050 | 3.3:-51474293 | MS.gene04515:CDS |
| AAGAGGCTTTCCAGATTTAC+CGG | 0.405654 | 3.3:+51474283 | None:intergenic |
| CAGATTGATGGGAAGGATGC+AGG | 0.418145 | 3.3:-51476439 | MS.gene04515:intron |
| ATCGAATTATTAGGGGAAAA+GGG | 0.420476 | 3.3:-51474308 | MS.gene04515:intron |
| AGCAATCACAACCTTGCTCT+TGG | 0.426225 | 3.3:+51472272 | None:intergenic |
| TTTACACATGGCAATGGAAT+GGG | 0.433694 | 3.3:-51474200 | MS.gene04515:CDS |
| TGGAAAGGTGCTTTCGGGAA+TGG | 0.451229 | 3.3:-51472340 | MS.gene04515:CDS |
| TGCCCAGGTCGTATTGTAAT+AGG | 0.454334 | 3.3:-51474854 | MS.gene04515:intron |
| TGAATTAATGCAGGCAAAGA+AGG | 0.458033 | 3.3:-51476509 | MS.gene04515:intron |
| ATGGGCGGAGAATCAATTTA+CGG | 0.458516 | 3.3:-51474182 | MS.gene04515:CDS |
| GAAGGCGAAAGAGGATTTGA+AGG | 0.459280 | 3.3:-51476491 | MS.gene04515:CDS |
| GCAATCACAACCTTGCTCTT+GGG | 0.462284 | 3.3:+51472273 | None:intergenic |
| AAGCTAAAGCACACTGGTCC+AGG | 0.474279 | 3.3:-51474134 | MS.gene04515:intron |
| CCTCCTTGGATCATAAAGCT+AGG | 0.503079 | 3.3:+51474227 | None:intergenic |
| ATGAGAGGATGCACTTATAG+AGG | 0.504255 | 3.3:+51472234 | None:intergenic |
| AACTTCCGAGCTCTTTGCAC+AGG | 0.508572 | 3.3:-51474707 | MS.gene04515:intron |
| ATCCCTAGCTTTATGATCCA+AGG | 0.510185 | 3.3:-51474230 | MS.gene04515:CDS |
| TAAAGCTAGGGATAATCCTA+TGG | 0.516056 | 3.3:+51474240 | None:intergenic |
| GAGCTACCTTTGTAATGAAG+AGG | 0.529680 | 3.3:+51474266 | None:intergenic |
| GAAAACCTGAATAAGAGATA+GGG | 0.530691 | 3.3:+51476712 | None:intergenic |
| GCAGGCAAAGAAGGCGAAAG+AGG | 0.535933 | 3.3:-51476500 | MS.gene04515:intron |
| CTCCTTGGATCATAAAGCTA+GGG | 0.541065 | 3.3:+51474228 | None:intergenic |
| TCACAACTGTGACAACTAGC+TGG | 0.548760 | 3.3:-51473939 | MS.gene04515:intron |
| TGATGTTCAGATTGATGGGA+AGG | 0.552173 | 3.3:-51476446 | MS.gene04515:CDS |
| GCTCACCTGTGCAAAGAGCT+CGG | 0.558048 | 3.3:+51474702 | None:intergenic |
| TATCTGTTCGATAGGTTGGA+TGG | 0.559737 | 3.3:-51472378 | MS.gene04515:intron |
| ACAAAGGTAGCTCATTCCAT+AGG | 0.561949 | 3.3:-51474256 | MS.gene04515:CDS |
| CATGTGTAAAATCACCTCCT+TGG | 0.569371 | 3.3:+51474213 | None:intergenic |
| TGTTCGATAGGTTGGATGGA+AGG | 0.578646 | 3.3:-51472374 | MS.gene04515:intron |
| GTTTACAAGATTGAAGCTGA+AGG | 0.584212 | 3.3:-51472312 | MS.gene04515:CDS |
| TCGAATTATTAGGGGAAAAG+GGG | 0.585482 | 3.3:-51474307 | MS.gene04515:intron |
| TTATTAGGGGAAAAGGGGAC+CGG | 0.590285 | 3.3:-51474302 | MS.gene04515:intron |
| AAGGTTGTGATTGCTGATAG+TGG | 0.613906 | 3.3:-51472264 | MS.gene04515:CDS |
| AAGTGGCACTCCCAAGAGCA+AGG | 0.616632 | 3.3:-51472283 | MS.gene04515:CDS |
| GGAAAGCCTCTTCATTACAA+AGG | 0.618832 | 3.3:-51474272 | MS.gene04515:CDS |
| ACACATGGCAATGGAATGGG+CGG | 0.629266 | 3.3:-51474197 | MS.gene04515:CDS |
| TTTGAAGGAAGTGACAAACA+AGG | 0.637543 | 3.3:-51476476 | MS.gene04515:CDS |
| AACTTCAAGCTAAAGCACAC+TGG | 0.639521 | 3.3:-51474140 | MS.gene04515:CDS |
| AATGCTGGTCCTGATACCAA+TGG | 0.652457 | 3.3:-51473976 | MS.gene04515:CDS |
| TAAGAGATAGGGTTCCAAAG+AGG | 0.673170 | 3.3:+51476723 | None:intergenic |
| GAAGCTGAAGGAAATCAAAG+TGG | 0.680132 | 3.3:-51472300 | MS.gene04515:CDS |
| CCTAGCTTTATGATCCAAGG+AGG | 0.704339 | 3.3:-51474227 | MS.gene04515:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAAAATATAAATAAATCTTG+TGG | + | chr3.3:51473768-51473787 | None:intergenic | 10.0% |
| !! | TTACAAATTGAAATATATTA+TGG | - | chr3.3:51474648-51474667 | MS.gene04515:intron | 10.0% |
| !! | TTTATTATAAAAAAATCTCA+TGG | + | chr3.3:51473810-51473829 | None:intergenic | 10.0% |
| !!! | ATTCAAAAAATTTTTAGAAA+TGG | - | chr3.3:51473014-51473033 | MS.gene04515:intron | 10.0% |
| !!! | CAAAAATATAATGATTTTAA+TGG | + | chr3.3:51473647-51473666 | None:intergenic | 10.0% |
| !!! | TTTATTTTTTTTCATTTTGA+AGG | - | chr3.3:51473211-51473230 | MS.gene04515:intron | 10.0% |
| !! | AAATTATCCTTATTAACTAT+TGG | + | chr3.3:51476441-51476460 | None:intergenic | 15.0% |
| !! | AATAGTTAATAAGGATAATT+TGG | - | chr3.3:51476440-51476459 | MS.gene04515:CDS | 15.0% |
| !! | AATTTCTTTGTATCATTAAT+AGG | + | chr3.3:51473296-51473315 | None:intergenic | 15.0% |
| !! | ATTATTAAAAACATTACCTT+TGG | + | chr3.3:51475883-51475902 | None:intergenic | 15.0% |
| !! | TATTAAATGTTATTAGGAAA+TGG | + | chr3.3:51474585-51474604 | None:intergenic | 15.0% |
| !! | TCAAAAAAAGAAACTTTATT+TGG | + | chr3.3:51475907-51475926 | None:intergenic | 15.0% |
| !! | TCAGTATATTAAATGTTATT+AGG | + | chr3.3:51474591-51474610 | None:intergenic | 15.0% |
| !!! | CATTTTGAAACAAATTTTTT+TGG | + | chr3.3:51476314-51476333 | None:intergenic | 15.0% |
| !!! | TAGTTTTAAAAGTAATACTT+TGG | + | chr3.3:51476417-51476436 | None:intergenic | 15.0% |
| !!! | TTTTTTTATAAAAAGTCTTG+TGG | - | chr3.3:51472859-51472878 | MS.gene04515:intron | 15.0% |
| !! | AAAAGAAATCATGATAACAT+TGG | + | chr3.3:51475295-51475314 | None:intergenic | 20.0% |
| !! | AAAAGTAAAGAAACAAATCT+TGG | - | chr3.3:51473469-51473488 | MS.gene04515:intron | 20.0% |
| !! | AAACTAACCAATAGTTAATA+AGG | - | chr3.3:51476431-51476450 | MS.gene04515:intron | 20.0% |
| !! | AAGGATTATATCATAAGATT+TGG | - | chr3.3:51472958-51472977 | MS.gene04515:intron | 20.0% |
| !! | AATGATTAAAAGAAAGAGAA+TGG | + | chr3.3:51476474-51476493 | None:intergenic | 20.0% |
| !! | ACAACTTAAAAAATGTCTAT+TGG | + | chr3.3:51473674-51473693 | None:intergenic | 20.0% |
| !! | ATAATCTGAGAAAAAAAATG+TGG | - | chr3.3:51475674-51475693 | MS.gene04515:intron | 20.0% |
| !! | ATTATATCATAAGATTTGGA+AGG | - | chr3.3:51472962-51472981 | MS.gene04515:intron | 20.0% |
| !! | ATTTGTAATTTGGATTTCAA+AGG | - | chr3.3:51472939-51472958 | MS.gene04515:intron | 20.0% |
| !! | TAAATATCAATTTCCAGTAT+TGG | + | chr3.3:51473111-51473130 | None:intergenic | 20.0% |
| !! | TAGCTGATAACAAATTTATT+GGG | + | chr3.3:51473929-51473948 | None:intergenic | 20.0% |
| !! | TATGAATTTGTAATTGTGTT+TGG | - | chr3.3:51472434-51472453 | MS.gene04515:intron | 20.0% |
| !! | TCATTTGTATCGAATTATTA+GGG | - | chr3.3:51474693-51474712 | MS.gene04515:intron | 20.0% |
| !! | TTAGCTGATAACAAATTTAT+TGG | + | chr3.3:51473930-51473949 | None:intergenic | 20.0% |
| !! | TTCATTTGTATCGAATTATT+AGG | - | chr3.3:51474692-51474711 | MS.gene04515:intron | 20.0% |
| !! | TTCTTCTCTAATAAAAAATG+AGG | + | chr3.3:51476084-51476103 | None:intergenic | 20.0% |
| !!! | AAACTATTTTGGTATGTAAT+GGG | - | chr3.3:51474110-51474129 | MS.gene04515:intron | 20.0% |
| !!! | ATAATGGATTTTGTGTATAA+TGG | + | chr3.3:51473614-51473633 | None:intergenic | 20.0% |
| !!! | CAATCAAGACTTTTTATTAA+AGG | + | chr3.3:51473732-51473751 | None:intergenic | 20.0% |
| !!! | GAGTTTATTTAGTATTTTAC+TGG | - | chr3.3:51476561-51476580 | MS.gene04515:intron | 20.0% |
| !!! | GTTTCTTTTTTTGAAATATC+AGG | - | chr3.3:51475913-51475932 | MS.gene04515:intron | 20.0% |
| !!! | TAATGGATTCTTTTGTATAA+TGG | + | chr3.3:51473630-51473649 | None:intergenic | 20.0% |
| !!! | TCATAGATTTTGATCAATTA+CGG | + | chr3.3:51475653-51475672 | None:intergenic | 20.0% |
| !!! | TTAAGATCATTATTTTGTGT+TGG | - | chr3.3:51472632-51472651 | MS.gene04515:intron | 20.0% |
| ! | AAAAGGAAGAAGTCAATAAA+AGG | - | chr3.3:51475421-51475440 | MS.gene04515:intron | 25.0% |
| ! | AAAGGAAGAAGTCAATAAAA+GGG | - | chr3.3:51475422-51475441 | MS.gene04515:intron | 25.0% |
| ! | AAATAGTTTGAATTCTCAGT+TGG | + | chr3.3:51474099-51474118 | None:intergenic | 25.0% |
| ! | AAATTGCAAATACACCATTA+AGG | + | chr3.3:51473876-51473895 | None:intergenic | 25.0% |
| ! | AATAGCACAATAGAGAAAAA+TGG | - | chr3.3:51473362-51473381 | MS.gene04515:intron | 25.0% |
| ! | AATGTATATATCTGTTCGAT+AGG | - | chr3.3:51476623-51476642 | MS.gene04515:intron | 25.0% |
| ! | AATTGCAAATACACCATTAA+GGG | + | chr3.3:51473875-51473894 | None:intergenic | 25.0% |
| ! | ACAATCATAAACTATATTGG+CGG | + | chr3.3:51472702-51472721 | None:intergenic | 25.0% |
| ! | AGTGAAAAGAAGCAAAATAA+CGG | + | chr3.3:51474541-51474560 | None:intergenic | 25.0% |
| ! | ATAGGAGTAGATAACTAATT+AGG | - | chr3.3:51475216-51475235 | MS.gene04515:intron | 25.0% |
| ! | ATATTCTGATAGATGTTGAT+AGG | - | chr3.3:51475198-51475217 | MS.gene04515:intron | 25.0% |
| ! | ATCTTGTTGGTATTATTTGA+TGG | - | chr3.3:51476049-51476068 | MS.gene04515:intron | 25.0% |
| ! | CAGAATATGCTTTAGTAAAA+TGG | + | chr3.3:51475186-51475205 | None:intergenic | 25.0% |
| ! | CATTTGTATCGAATTATTAG+GGG | - | chr3.3:51474694-51474713 | MS.gene04515:intron | 25.0% |
| ! | GACACAATCATAAACTATAT+TGG | + | chr3.3:51472705-51472724 | None:intergenic | 25.0% |
| ! | GACTATCAAGATTTGTAATT+TGG | - | chr3.3:51472929-51472948 | MS.gene04515:intron | 25.0% |
| ! | GCTTTAGTAAAATGGAAAAA+AGG | + | chr3.3:51475178-51475197 | None:intergenic | 25.0% |
| ! | GTATTGAATTGAGATTTCAA+AGG | + | chr3.3:51473848-51473867 | None:intergenic | 25.0% |
| ! | TAAAGAAAATACATGCATAC+TGG | + | chr3.3:51476214-51476233 | None:intergenic | 25.0% |
| ! | TCAAAATCTCTGTATATTGT+TGG | - | chr3.3:51474219-51474238 | MS.gene04515:CDS | 25.0% |
| ! | TCTTGTTGGTATTATTTGAT+GGG | - | chr3.3:51476050-51476069 | MS.gene04515:intron | 25.0% |
| ! | TGATACATATGGTTTAAAAG+AGG | + | chr3.3:51475807-51475826 | None:intergenic | 25.0% |
| !! | AAGGTTGTAAAATTTTGTAG+AGG | - | chr3.3:51473230-51473249 | MS.gene04515:intron | 25.0% |
| !! | AATTGTGGAAAAGTTTTCAT+TGG | + | chr3.3:51475384-51475403 | None:intergenic | 25.0% |
| !! | AATTTTGTGTGAATTAATGC+AGG | - | chr3.3:51472491-51472510 | MS.gene04515:intron | 25.0% |
| !! | ACTGAGAATTCAAACTATTT+TGG | - | chr3.3:51474099-51474118 | MS.gene04515:intron | 25.0% |
| !! | ATACTGGTTAAAGAAAATAC+AGG | + | chr3.3:51476198-51476217 | None:intergenic | 25.0% |
| !! | ATCAACAGGATTTTTATCAA+TGG | - | chr3.3:51475008-51475027 | MS.gene04515:intron | 25.0% |
| !! | ATGGATTCATGAGATTTTAT+AGG | - | chr3.3:51472991-51473010 | MS.gene04515:intron | 25.0% |
| !! | ATTTGAACATGTGTTTTCTT+TGG | + | chr3.3:51475133-51475152 | None:intergenic | 25.0% |
| !! | GTATTGTAATAGGTCTTTTT+GGG | - | chr3.3:51474165-51474184 | MS.gene04515:CDS | 25.0% |
| !! | TAAAAACATTACCTTTGGAA+CGG | + | chr3.3:51475878-51475897 | None:intergenic | 25.0% |
| !! | TGTATTTTCTTTAACCAGTA+TGG | - | chr3.3:51476197-51476216 | MS.gene04515:intron | 25.0% |
| !! | TTCTCTTTAGTTAGTCATTT+TGG | - | chr3.3:51472749-51472768 | MS.gene04515:intron | 25.0% |
| !!! | ATTTTGATGTTCAGATTGAT+GGG | - | chr3.3:51472559-51472578 | MS.gene04515:intron | 25.0% |
| !!! | CAAACTATTTTGGTATGTAA+TGG | - | chr3.3:51474109-51474128 | MS.gene04515:intron | 25.0% |
| !!! | TAGACATTTTTTAAGTTGTG+AGG | - | chr3.3:51473675-51473694 | MS.gene04515:intron | 25.0% |
| !!! | TATTTTGATGTTCAGATTGA+TGG | - | chr3.3:51472558-51472577 | MS.gene04515:intron | 25.0% |
| !!! | TGTTATTTCGTTAGTCAATT+TGG | - | chr3.3:51472777-51472796 | MS.gene04515:intron | 25.0% |
| AAACAAAAGAGACATTTAGG+GGG | - | chr3.3:51472808-51472827 | MS.gene04515:intron | 30.0% | |
| AAACGACACTCATTATGAAA+TGG | - | chr3.3:51476523-51476542 | MS.gene04515:intron | 30.0% | |
| AACACATATCTAAGTCTATC+AGG | - | chr3.3:51474504-51474523 | MS.gene04515:intron | 30.0% | |
| AACCATATGTATCACGTAAT+CGG | - | chr3.3:51475813-51475832 | MS.gene04515:intron | 30.0% | |
| AAGGAAGAAGTCAATAAAAG+GGG | - | chr3.3:51475423-51475442 | MS.gene04515:intron | 30.0% | |
| AAGTTCAAATGAATCTCTGA+TGG | - | chr3.3:51474943-51474962 | MS.gene04515:intron | 30.0% | |
| AATGCAATTGAGAAGATATG+TGG | + | chr3.3:51473080-51473099 | None:intergenic | 30.0% | |
| ACAATTCATGGTAAGTCAAT+TGG | - | chr3.3:51475398-51475417 | MS.gene04515:intron | 30.0% | |
| AGTTCAAATGAATCTCTGAT+GGG | - | chr3.3:51474944-51474963 | MS.gene04515:intron | 30.0% | |
| ATCCATGATCATAATCTTGT+TGG | - | chr3.3:51476036-51476055 | MS.gene04515:intron | 30.0% | |
| ATCGAATTATTAGGGGAAAA+GGG | - | chr3.3:51474701-51474720 | MS.gene04515:intron | 30.0% | |
| ATTGCAAATACACCATTAAG+GGG | + | chr3.3:51473874-51473893 | None:intergenic | 30.0% | |
| CAAACAAAAGAGACATTTAG+GGG | - | chr3.3:51472807-51472826 | MS.gene04515:intron | 30.0% | |
| GAAAACCTGAATAAGAGATA+GGG | + | chr3.3:51472300-51472319 | None:intergenic | 30.0% | |
| GAGAATAAAATAGAAGACGA+AGG | - | chr3.3:51475537-51475556 | MS.gene04515:intron | 30.0% | |
| GAGTTAGTAATGTGAAATGA+GGG | - | chr3.3:51474058-51474077 | MS.gene04515:intron | 30.0% | |
| GATGAAAAATTGTGAACCAT+TGG | + | chr3.3:51475052-51475071 | None:intergenic | 30.0% | |
| GCAAACAAAAGAGACATTTA+GGG | - | chr3.3:51472806-51472825 | MS.gene04515:intron | 30.0% | |
| TACCAACAAGATTATGATCA+TGG | + | chr3.3:51476041-51476060 | None:intergenic | 30.0% | |
| TACGGAAACATGTAAAATGT+TGG | + | chr3.3:51475635-51475654 | None:intergenic | 30.0% | |
| TAGGAAATGGATGAAATGTT+AGG | + | chr3.3:51474572-51474591 | None:intergenic | 30.0% | |
| TATATATCTGTTCGATAGGT+TGG | - | chr3.3:51476627-51476646 | MS.gene04515:intron | 30.0% | |
| TATCGAATTATTAGGGGAAA+AGG | - | chr3.3:51474700-51474719 | MS.gene04515:intron | 30.0% | |
| TGAAAACCTGAATAAGAGAT+AGG | + | chr3.3:51472301-51472320 | None:intergenic | 30.0% | |
| TGCAAACAAAAGAGACATTT+AGG | - | chr3.3:51472805-51472824 | MS.gene04515:intron | 30.0% | |
| TGCACCACTTATTATAAAAG+AGG | + | chr3.3:51475717-51475736 | None:intergenic | 30.0% | |
| TGTATGTCATGTCATGATTA+TGG | + | chr3.3:51476161-51476180 | None:intergenic | 30.0% | |
| TTATTAAAGGCAACGAAATC+CGG | + | chr3.3:51473719-51473738 | None:intergenic | 30.0% | |
| TTCTCTTTATATAGCAATGC+TGG | + | chr3.3:51475324-51475343 | None:intergenic | 30.0% | |
| TTGTTCAGTCTCATATTTAC+CGG | - | chr3.3:51475983-51476002 | MS.gene04515:intron | 30.0% | |
| ! | AAGATTTGGAAGGACTTTTA+TGG | - | chr3.3:51472972-51472991 | MS.gene04515:intron | 30.0% |
| ! | AATTGACTTACCATGAATTG+TGG | + | chr3.3:51475399-51475418 | None:intergenic | 30.0% |
| ! | AGAAAGTATGAAAAGTCTCA+AGG | - | chr3.3:51473525-51473544 | MS.gene04515:intron | 30.0% |
| ! | CGTATTGTAATAGGTCTTTT+TGG | - | chr3.3:51474164-51474183 | MS.gene04515:CDS | 30.0% |
| ! | GAAAACTTTTCCACAATTCA+TGG | - | chr3.3:51475386-51475405 | MS.gene04515:intron | 30.0% |
| ! | TTTAACCTCAATGGTCATTT+TGG | - | chr3.3:51472657-51472676 | MS.gene04515:intron | 30.0% |
| ! | TTTTTATCAATGGCAAATGC+TGG | - | chr3.3:51475018-51475037 | MS.gene04515:intron | 30.0% |
| !! | AAAAACATTACCTTTGGAAC+GGG | + | chr3.3:51475877-51475896 | None:intergenic | 30.0% |
| !! | AAGCGAAACTCATTTTGAAA+CGG | + | chr3.3:51476288-51476307 | None:intergenic | 30.0% |
| !!! | TTCATAATGAGTGTCGTTTT+AGG | + | chr3.3:51476522-51476541 | None:intergenic | 30.0% |
| !!! | TTGTCATTTTCTGTATCAAC+AGG | - | chr3.3:51474994-51475013 | MS.gene04515:intron | 30.0% |
| !!! | TTTTGAAATATCAGGTGCAT+TGG | - | chr3.3:51475921-51475940 | MS.gene04515:intron | 30.0% |
| AATTATAACACCCGTTCCAA+AGG | - | chr3.3:51475864-51475883 | MS.gene04515:intron | 35.0% | |
| AATTGTGAACCATTGGTATC+AGG | + | chr3.3:51475045-51475064 | None:intergenic | 35.0% | |
| ACATATCTAAGTCTATCAGG+TGG | - | chr3.3:51474507-51474526 | MS.gene04515:intron | 35.0% | |
| ACCATATGTATCACGTAATC+GGG | - | chr3.3:51475814-51475833 | MS.gene04515:intron | 35.0% | |
| ACTAACTAAAGAGAAACTCG+AGG | + | chr3.3:51472744-51472763 | None:intergenic | 35.0% | |
| AGACAGATAGAACATTTACC+TGG | + | chr3.3:51474896-51474915 | None:intergenic | 35.0% | |
| AGTCTCATATTTACCGGAAA+GGG | - | chr3.3:51475989-51476008 | MS.gene04515:intron | 35.0% | |
| CATGGTAAGTCAATTGGAAA+AGG | - | chr3.3:51475404-51475423 | MS.gene04515:intron | 35.0% | |
| CGAGTTAGTAATGTGAAATG+AGG | - | chr3.3:51474057-51474076 | MS.gene04515:intron | 35.0% | |
| GAATCTCAATTGAATACCAC+CGG | - | chr3.3:51473697-51473716 | MS.gene04515:intron | 35.0% | |
| GACACTCATTATGAAATGGT+GGG | - | chr3.3:51476527-51476546 | MS.gene04515:intron | 35.0% | |
| GCGTTAACAAATTTGAGTCA+GGG | + | chr3.3:51475951-51475970 | None:intergenic | 35.0% | |
| GTGTGATATAAGTGAGAAAG+AGG | - | chr3.3:51475781-51475800 | MS.gene04515:intron | 35.0% | |
| GTTCAAATGAATCTCTGATG+GGG | - | chr3.3:51474945-51474964 | MS.gene04515:intron | 35.0% | |
| GTTTACAAGATTGAAGCTGA+AGG | - | chr3.3:51476697-51476716 | MS.gene04515:intron | 35.0% | |
| TAAAGCTAGGGATAATCCTA+TGG | + | chr3.3:51474772-51474791 | None:intergenic | 35.0% | |
| TCGAATTATTAGGGGAAAAG+GGG | - | chr3.3:51474702-51474721 | MS.gene04515:intron | 35.0% | |
| TGAATTAATGCAGGCAAAGA+AGG | - | chr3.3:51472500-51472519 | MS.gene04515:intron | 35.0% | |
| TGAGAAAAAAAATGTGGCGT+AGG | - | chr3.3:51475680-51475699 | MS.gene04515:intron | 35.0% | |
| TGCGTTAACAAATTTGAGTC+AGG | + | chr3.3:51475952-51475971 | None:intergenic | 35.0% | |
| TTGCAAATACACCATTAAGG+GGG | + | chr3.3:51473873-51473892 | None:intergenic | 35.0% | |
| TTTACACATGGCAATGGAAT+GGG | - | chr3.3:51474809-51474828 | MS.gene04515:intron | 35.0% | |
| TTTGAAGGAAGTGACAAACA+AGG | - | chr3.3:51472533-51472552 | MS.gene04515:intron | 35.0% | |
| ! | CAAAAGGGTACATCAAAACA+AGG | + | chr3.3:51474277-51474296 | None:intergenic | 35.0% |
| ! | GAGAGCATAGCGAATTAAAA+AGG | - | chr3.3:51475356-51475375 | MS.gene04515:intron | 35.0% |
| ! | GAGGCCTCTTTTATAATAAG+TGG | - | chr3.3:51475710-51475729 | MS.gene04515:intron | 35.0% |
| ! | GAGGCTAGTTCTTCTAATTA+AGG | - | chr3.3:51473971-51473990 | MS.gene04515:CDS | 35.0% |
| ! | GTAGTGTGCAGAGTATTAAT+TGG | + | chr3.3:51476392-51476411 | None:intergenic | 35.0% |
| ! | TGAAAAGTGTGCGTTTATAG+AGG | - | chr3.3:51473952-51473971 | MS.gene04515:CDS | 35.0% |
| ! | TGTGCAGAGTATTAATTGGA+GGG | + | chr3.3:51476388-51476407 | None:intergenic | 35.0% |
| ! | TTTTACACATGGCAATGGAA+TGG | - | chr3.3:51474808-51474827 | MS.gene04515:intron | 35.0% |
| !! | GATTTTGAAAACCTTACCTG+CGG | + | chr3.3:51474207-51474226 | None:intergenic | 35.0% |
| !! | GCATTCTTTAAGACCAATAC+TGG | - | chr3.3:51473095-51473114 | MS.gene04515:intron | 35.0% |
| !! | GTGTTGGATTTTAACCTCAA+TGG | - | chr3.3:51472648-51472667 | MS.gene04515:intron | 35.0% |
| !!! | AAGGCATGTTGTTTTTGGAA+AGG | - | chr3.3:51476654-51476673 | MS.gene04515:intron | 35.0% |
| !!! | GAAACTCATTTTGAAACGGA+GGG | + | chr3.3:51476284-51476303 | None:intergenic | 35.0% |
| !!! | TGTTTTTGGAAAGGTGCTTT+CGG | - | chr3.3:51476663-51476682 | MS.gene04515:intron | 35.0% |
| AACTTCAAGCTAAAGCACAC+TGG | - | chr3.3:51474869-51474888 | MS.gene04515:intron | 40.0% | |
| AAGAACCGATGACTATCAGT+TGG | - | chr3.3:51474453-51474472 | MS.gene04515:intron | 40.0% | |
| AAGAAGTCAATAAAAGGGGC+TGG | - | chr3.3:51475427-51475446 | MS.gene04515:intron | 40.0% | |
| AAGAGGCTTTCCAGATTTAC+CGG | + | chr3.3:51474729-51474748 | None:intergenic | 40.0% | |
| AAGGTTGTGATTGCTGATAG+TGG | - | chr3.3:51476745-51476764 | MS.gene04515:CDS | 40.0% | |
| ACAAAGGTAGCTCATTCCAT+AGG | - | chr3.3:51474753-51474772 | MS.gene04515:intron | 40.0% | |
| ACAAGCCAACTGATAGTCAT+CGG | + | chr3.3:51474461-51474480 | None:intergenic | 40.0% | |
| AGAAGTCAATAAAAGGGGCT+GGG | - | chr3.3:51475428-51475447 | MS.gene04515:intron | 40.0% | |
| AGACCTATTACAATACGACC+TGG | + | chr3.3:51474161-51474180 | None:intergenic | 40.0% | |
| AGAGACCAAAATGACCATTG+AGG | + | chr3.3:51472665-51472684 | None:intergenic | 40.0% | |
| AGTGGTGCAAGATGATATTG+CGG | - | chr3.3:51475728-51475747 | MS.gene04515:intron | 40.0% | |
| ATCGGGAACAAAATGGCAAA+AGG | - | chr3.3:51475831-51475850 | MS.gene04515:intron | 40.0% | |
| ATGGGCGGAGAATCAATTTA+CGG | - | chr3.3:51474827-51474846 | MS.gene04515:CDS | 40.0% | |
| ATTCAATACACCCCCCTTAA+TGG | - | chr3.3:51473859-51473878 | MS.gene04515:intron | 40.0% | |
| CAGTCTCATATTTACCGGAA+AGG | - | chr3.3:51475988-51476007 | MS.gene04515:intron | 40.0% | |
| CATGTGTAAAATCACCTCCT+TGG | + | chr3.3:51474799-51474818 | None:intergenic | 40.0% | |
| CGACACTCATTATGAAATGG+TGG | - | chr3.3:51476526-51476545 | MS.gene04515:intron | 40.0% | |
| CTCCTTGGATCATAAAGCTA+GGG | + | chr3.3:51474784-51474803 | None:intergenic | 40.0% | |
| CTTATATCACACGTTGTCGT+AGG | + | chr3.3:51475773-51475792 | None:intergenic | 40.0% | |
| CTTGGCAATCAATTGTCTGA+AGG | - | chr3.3:51473487-51473506 | MS.gene04515:intron | 40.0% | |
| GAAGCTGAAGGAAATCAAAG+TGG | - | chr3.3:51476709-51476728 | MS.gene04515:intron | 40.0% | |
| GACCTATTACAATACGACCT+GGG | + | chr3.3:51474160-51474179 | None:intergenic | 40.0% | |
| GAGCTACCTTTGTAATGAAG+AGG | + | chr3.3:51474746-51474765 | None:intergenic | 40.0% | |
| GGAAAGCCTCTTCATTACAA+AGG | - | chr3.3:51474737-51474756 | MS.gene04515:intron | 40.0% | |
| TAAGAGATAGGGTTCCAAAG+AGG | + | chr3.3:51472289-51472308 | None:intergenic | 40.0% | |
| TATCACTGTCTGAGCTTATG+AGG | - | chr3.3:51474611-51474630 | MS.gene04515:intron | 40.0% | |
| TCACGTAATCGGGAACAAAA+TGG | - | chr3.3:51475824-51475843 | MS.gene04515:intron | 40.0% | |
| TCCCGATTACGTGATACATA+TGG | + | chr3.3:51475818-51475837 | None:intergenic | 40.0% | |
| TGATGTTCAGATTGATGGGA+AGG | - | chr3.3:51472563-51472582 | MS.gene04515:intron | 40.0% | |
| TGCAAATACACCATTAAGGG+GGG | + | chr3.3:51473872-51473891 | None:intergenic | 40.0% | |
| TGGAACCCTATCTCTTATTC+AGG | - | chr3.3:51472292-51472311 | MS.gene04515:CDS | 40.0% | |
| TTGCACAACTATTCCCTTTC+CGG | + | chr3.3:51476005-51476024 | None:intergenic | 40.0% | |
| ! | AAAACCTTACCTGCGGTTTT+TGG | + | chr3.3:51474200-51474219 | None:intergenic | 40.0% |
| ! | CAAGGAGGTGATTTTACACA+TGG | - | chr3.3:51474797-51474816 | MS.gene04515:intron | 40.0% |
| ! | CTCGGAAGTTTTCTGCAAAA+GGG | + | chr3.3:51474292-51474311 | None:intergenic | 40.0% |
| ! | CTCTTTTCACTGTTCCTCTT+TGG | - | chr3.3:51472272-51472291 | MS.gene04515:CDS | 40.0% |
| ! | GGTGATTTTACACATGGCAA+TGG | - | chr3.3:51474803-51474822 | MS.gene04515:intron | 40.0% |
| ! | GTGTGCAGAGTATTAATTGG+AGG | + | chr3.3:51476389-51476408 | None:intergenic | 40.0% |
| ! | TATCTGTTCGATAGGTTGGA+TGG | - | chr3.3:51476631-51476650 | MS.gene04515:intron | 40.0% |
| ! | TTTAGGGGGTGTATTGGATT+AGG | - | chr3.3:51472822-51472841 | MS.gene04515:intron | 40.0% |
| !! | ACTATCAGTTGGCTTGTAAC+TGG | - | chr3.3:51474464-51474483 | MS.gene04515:intron | 40.0% |
| !! | ATCCCTAGCTTTATGATCCA+AGG | - | chr3.3:51474779-51474798 | MS.gene04515:intron | 40.0% |
| !!! | CGAAACTCATTTTGAAACGG+AGG | + | chr3.3:51476285-51476304 | None:intergenic | 40.0% |
| !!! | GATGGAAGGCATGTTGTTTT+TGG | - | chr3.3:51476649-51476668 | MS.gene04515:intron | 40.0% |
| !!! | GTTTTTGGAAAGGTGCTTTC+GGG | - | chr3.3:51476664-51476683 | MS.gene04515:intron | 40.0% |
| AAGACAGTTCCAAAAACCGC+AGG | - | chr3.3:51474188-51474207 | MS.gene04515:CDS | 45.0% | |
| AATGCTGGTCCTGATACCAA+TGG | - | chr3.3:51475033-51475052 | MS.gene04515:intron | 45.0% | |
| AATTCGCTATGCTCTCGTGA+TGG | + | chr3.3:51475352-51475371 | None:intergenic | 45.0% | |
| ACTGCATGCAGTGGACATAT+AGG | + | chr3.3:51475243-51475262 | None:intergenic | 45.0% | |
| AGCAATCACAACCTTGCTCT+TGG | + | chr3.3:51476740-51476759 | None:intergenic | 45.0% | |
| AGTTCCAAAAACCGCAGGTA+AGG | - | chr3.3:51474193-51474212 | MS.gene04515:CDS | 45.0% | |
| CCTCCTTGGATCATAAAGCT+AGG | + | chr3.3:51474785-51474804 | None:intergenic | 45.0% | |
| GAAGGCGAAAGAGGATTTGA+AGG | - | chr3.3:51472518-51472537 | MS.gene04515:intron | 45.0% | |
| GCAATCACAACCTTGCTCTT+GGG | + | chr3.3:51476739-51476758 | None:intergenic | 45.0% | |
| TCACAACTGTGACAACTAGC+TGG | - | chr3.3:51475070-51475089 | MS.gene04515:intron | 45.0% | |
| TGCCCAGGTCGTATTGTAAT+AGG | - | chr3.3:51474155-51474174 | MS.gene04515:CDS | 45.0% | |
| TTAAAGGCAACGAAATCCGG+TGG | + | chr3.3:51473716-51473735 | None:intergenic | 45.0% | |
| TTATTAGGGGAAAAGGGGAC+CGG | - | chr3.3:51474707-51474726 | MS.gene04515:intron | 45.0% | |
| ! | GAGACATTTAGGGGGTGTAT+TGG | - | chr3.3:51472816-51472835 | MS.gene04515:intron | 45.0% |
| ! | GCTCGGAAGTTTTCTGCAAA+AGG | + | chr3.3:51474293-51474312 | None:intergenic | 45.0% |
| ! | TGTTCGATAGGTTGGATGGA+AGG | - | chr3.3:51476635-51476654 | MS.gene04515:intron | 45.0% |
| !! | CAGTTGGCTTGTAACTGGAT+AGG | - | chr3.3:51474469-51474488 | MS.gene04515:intron | 45.0% |
| !! | CCTAGCTTTATGATCCAAGG+AGG | - | chr3.3:51474782-51474801 | MS.gene04515:intron | 45.0% |
| AACTTCCGAGCTCTTTGCAC+AGG | - | chr3.3:51474302-51474321 | MS.gene04515:intron | 50.0% | |
| AAGCTAAAGCACACTGGTCC+AGG | - | chr3.3:51474875-51474894 | MS.gene04515:intron | 50.0% | |
| ACACATGGCAATGGAATGGG+CGG | - | chr3.3:51474812-51474831 | MS.gene04515:intron | 50.0% | |
| AGTCAATAAAAGGGGCTGGG+TGG | - | chr3.3:51475431-51475450 | MS.gene04515:intron | 50.0% | |
| ATGTGGCGTAGGTGAGAAAG+AGG | - | chr3.3:51475691-51475710 | MS.gene04515:intron | 50.0% | |
| CAGATTGATGGGAAGGATGC+AGG | - | chr3.3:51472570-51472589 | MS.gene04515:intron | 50.0% | |
| CGAAAAATAGCAGCAGCTCG+TGG | - | chr3.3:51473444-51473463 | MS.gene04515:intron | 50.0% | |
| GAAAAGGGGACCGGTAAATC+TGG | - | chr3.3:51474716-51474735 | MS.gene04515:intron | 50.0% | |
| GTTGTGATTCTTGTCTGCCC+AGG | - | chr3.3:51474140-51474159 | MS.gene04515:CDS | 50.0% | |
| TGCGTCAAAACTGCATGCAG+TGG | + | chr3.3:51475252-51475271 | None:intergenic | 50.0% | |
| !! | TGGAAAGGTGCTTTCGGGAA+TGG | - | chr3.3:51476669-51476688 | MS.gene04515:intron | 50.0% |
| AAGTGGCACTCCCAAGAGCA+AGG | - | chr3.3:51476726-51476745 | MS.gene04515:CDS | 55.0% | |
| GCAGGCAAAGAAGGCGAAAG+AGG | - | chr3.3:51472509-51472528 | MS.gene04515:intron | 55.0% | |
| GCTCACCTGTGCAAAGAGCT+CGG | + | chr3.3:51474310-51474329 | None:intergenic | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.3 | gene | 51472248 | 51476783 | 51472248 | ID=MS.gene04515 |
| chr3.3 | mRNA | 51472248 | 51476783 | 51472248 | ID=MS.gene04515.t1;Parent=MS.gene04515 |
| chr3.3 | exon | 51476718 | 51476783 | 51476718 | ID=MS.gene04515.t1.exon1;Parent=MS.gene04515.t1 |
| chr3.3 | CDS | 51476718 | 51476783 | 51476718 | ID=cds.MS.gene04515.t1;Parent=MS.gene04515.t1 |
| chr3.3 | exon | 51476440 | 51476518 | 51476440 | ID=MS.gene04515.t1.exon2;Parent=MS.gene04515.t1 |
| chr3.3 | CDS | 51476440 | 51476518 | 51476440 | ID=cds.MS.gene04515.t1;Parent=MS.gene04515.t1 |
| chr3.3 | exon | 51474822 | 51474869 | 51474822 | ID=MS.gene04515.t1.exon3;Parent=MS.gene04515.t1 |
| chr3.3 | CDS | 51474822 | 51474869 | 51474822 | ID=cds.MS.gene04515.t1;Parent=MS.gene04515.t1 |
| chr3.3 | exon | 51474708 | 51474731 | 51474708 | ID=MS.gene04515.t1.exon4;Parent=MS.gene04515.t1 |
| chr3.3 | CDS | 51474708 | 51474731 | 51474708 | ID=cds.MS.gene04515.t1;Parent=MS.gene04515.t1 |
| chr3.3 | exon | 51474135 | 51474317 | 51474135 | ID=MS.gene04515.t1.exon5;Parent=MS.gene04515.t1 |
| chr3.3 | CDS | 51474135 | 51474317 | 51474135 | ID=cds.MS.gene04515.t1;Parent=MS.gene04515.t1 |
| chr3.3 | exon | 51473940 | 51474015 | 51473940 | ID=MS.gene04515.t1.exon6;Parent=MS.gene04515.t1 |
| chr3.3 | CDS | 51473940 | 51474015 | 51473940 | ID=cds.MS.gene04515.t1;Parent=MS.gene04515.t1 |
| chr3.3 | exon | 51472248 | 51472386 | 51472248 | ID=MS.gene04515.t1.exon7;Parent=MS.gene04515.t1 |
| chr3.3 | CDS | 51472248 | 51472386 | 51472248 | ID=cds.MS.gene04515.t1;Parent=MS.gene04515.t1 |
| Gene Sequence |
| Protein sequence |
