Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene003757.t1 | XP_003606904.1 | 99 | 200 | 1 | 1 | 1 | 199 | 112 | 311 | 1.00E-93 | 352.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene003757.t1 | Q8GUH2 | 41.3 | 218 | 99 | 8 | 1 | 197 | 116 | 325 | 3.0e-17 | 90.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene003757.t1 | G7JG61 | 99.0 | 200 | 1 | 1 | 1 | 199 | 112 | 311 | 7.4e-94 | 352.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene79923 | MS.gene003757 | PPI |
| MS.gene003757 | MS.gene019686 | PPI |
| MS.gene003757 | MS.gene000647 | PPI |
| MS.gene003757 | MS.gene92099 | PPI |
| MS.gene003757 | MS.gene056832 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene003757.t1 | MTR_4g070020 | 99.000 | 200 | 1 | 1 | 1 | 199 | 112 | 311 | 1.23e-145 | 407 |
| MS.gene003757.t1 | MTR_4g070020 | 98.400 | 125 | 1 | 1 | 1 | 124 | 112 | 236 | 5.11e-84 | 249 |
| MS.gene003757.t1 | MTR_1g022190 | 44.175 | 206 | 96 | 6 | 1 | 199 | 119 | 312 | 2.46e-50 | 165 |
| MS.gene003757.t1 | MTR_1g022190 | 44.175 | 206 | 96 | 6 | 1 | 199 | 144 | 337 | 4.43e-50 | 165 |
| MS.gene003757.t1 | MTR_1g022190 | 44.175 | 206 | 96 | 6 | 1 | 199 | 149 | 342 | 6.14e-50 | 165 |
| MS.gene003757.t1 | MTR_8g028630 | 41.315 | 213 | 99 | 7 | 1 | 198 | 101 | 302 | 5.41e-42 | 144 |
| MS.gene003757.t1 | MTR_1g022190 | 41.026 | 117 | 56 | 3 | 1 | 116 | 144 | 248 | 1.39e-22 | 92.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene003757.t1 | AT1G75180 | 55.172 | 203 | 87 | 3 | 1 | 199 | 113 | 315 | 3.59e-69 | 213 |
| MS.gene003757.t1 | AT1G75180 | 55.172 | 203 | 87 | 3 | 1 | 199 | 113 | 315 | 3.59e-69 | 213 |
| MS.gene003757.t1 | AT1G19400 | 52.970 | 202 | 85 | 5 | 1 | 199 | 109 | 303 | 2.39e-61 | 193 |
| MS.gene003757.t1 | AT1G19400 | 52.970 | 202 | 85 | 5 | 1 | 199 | 109 | 303 | 2.39e-61 | 193 |
| MS.gene003757.t1 | AT1G19400 | 52.970 | 202 | 85 | 5 | 1 | 199 | 109 | 303 | 2.39e-61 | 193 |
| MS.gene003757.t1 | AT1G01500 | 39.545 | 220 | 104 | 8 | 1 | 199 | 116 | 327 | 1.78e-39 | 137 |
| MS.gene003757.t1 | AT1G75180 | 53.279 | 122 | 55 | 1 | 1 | 120 | 113 | 234 | 5.89e-35 | 124 |
| MS.gene003757.t1 | AT1G75180 | 53.279 | 122 | 55 | 1 | 1 | 120 | 113 | 234 | 2.47e-34 | 123 |
| MS.gene003757.t1 | AT1G19400 | 51.562 | 128 | 56 | 3 | 1 | 125 | 109 | 233 | 9.49e-33 | 118 |
Find 53 sgRNAs with CRISPR-Local
Find 93 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCCAGGCACAAAGTTCTTTA+AGG | 0.155540 | 4.2:+36914594 | MS.gene003757:CDS |
| GAGAATGATGCAAATGAAAA+TGG | 0.217056 | 4.2:+36914769 | MS.gene003757:CDS |
| TCCTTCTGCGCTTGCTTTGC+AGG | 0.233001 | 4.2:+36914798 | MS.gene003757:CDS |
| CATGGTTTAACGCCGGTGTT+AGG | 0.255714 | 4.2:+36915619 | MS.gene003757:CDS |
| GTTAGGGTTGGTGTTGGTAT+TGG | 0.297925 | 4.2:+36915636 | MS.gene003757:CDS |
| ATTGCTGTTACATAATTCTA+AGG | 0.316159 | 4.2:-36914506 | None:intergenic |
| GGAGAAGCAATTGTTGTTGC+CGG | 0.344534 | 4.2:+36914615 | MS.gene003757:CDS |
| AAAGATAAGCTTCTTCTGTT+TGG | 0.350138 | 4.2:+36914481 | MS.gene003757:CDS |
| GCGAAGATGGGGAACTTTCA+TGG | 0.371984 | 4.2:+36915601 | MS.gene003757:CDS |
| AGAATAGCCGTCTTCTGAAT+TGG | 0.372025 | 4.2:-36915728 | None:intergenic |
| GTTAGAGAATCAAATTCTAA+TGG | 0.378979 | 4.2:+36914535 | MS.gene003757:CDS |
| TATATTGCCGGGTCCTTCTC+TGG | 0.379377 | 4.2:+36914664 | MS.gene003757:CDS |
| ACAATTGAGGTCTATATTGC+CGG | 0.393367 | 4.2:+36914652 | MS.gene003757:CDS |
| TGTTTGTCATACATGTAATC+TGG | 0.402010 | 4.2:-36915528 | None:intergenic |
| CTTAGTGTTTGTCTTGGAAT+CGG | 0.423405 | 4.2:+36915660 | MS.gene003757:CDS |
| GCAATATAGACCTCAATTGT+TGG | 0.437528 | 4.2:-36914649 | None:intergenic |
| CTTGGAATCGGCATTGGAGT+TGG | 0.441010 | 4.2:+36915672 | MS.gene003757:CDS |
| TCCTTAAAGAACTTTGTGCC+TGG | 0.447833 | 4.2:-36914595 | None:intergenic |
| GTTTGTCTTGGAATCGGCAT+TGG | 0.451016 | 4.2:+36915666 | MS.gene003757:CDS |
| TGTGAGTCGAATATAATTCC+AGG | 0.452189 | 4.2:+36914577 | MS.gene003757:CDS |
| ATGGTTTAACGCCGGTGTTA+GGG | 0.458989 | 4.2:+36915620 | MS.gene003757:CDS |
| AGAATGATGCAAATGAAAAT+GGG | 0.470852 | 4.2:+36914770 | MS.gene003757:CDS |
| CGTATGCTGTTCTTGTGTAT+AGG | 0.473133 | 4.2:-36915572 | None:intergenic |
| TGAATTGGCCGGTGGCACCT+TGG | 0.475731 | 4.2:-36915713 | None:intergenic |
| ATTGGACTTAGTGTTTGTCT+TGG | 0.481547 | 4.2:+36915654 | MS.gene003757:CDS |
| GCATACGCTGACGGCGAAGA+TGG | 0.492307 | 4.2:+36915588 | MS.gene003757:CDS |
| CAAATTCTAATGGACAAAGT+TGG | 0.492533 | 4.2:+36914545 | MS.gene003757:CDS |
| CATACGCTGACGGCGAAGAT+GGG | 0.511131 | 4.2:+36915589 | MS.gene003757:CDS |
| ACCTGCAAAGCAAGCGCAGA+AGG | 0.534939 | 4.2:-36914799 | None:intergenic |
| GAGTGGTAGTGTGAAGTTTG+AGG | 0.549063 | 4.2:+36914450 | MS.gene003757:CDS |
| GCCGGTGTTAGGGTTGGTGT+TGG | 0.549235 | 4.2:+36915630 | MS.gene003757:CDS |
| CTCTACTCTTCCAACAATTG+AGG | 0.556408 | 4.2:+36914639 | MS.gene003757:CDS |
| AAATCATACCAAGGTGCCAC+CGG | 0.568352 | 4.2:+36915705 | MS.gene003757:CDS |
| TTTAACGCCGGTGTTAGGGT+TGG | 0.570434 | 4.2:+36915624 | MS.gene003757:CDS |
| TAGCCGTCTTCTGAATTGGC+CGG | 0.581948 | 4.2:-36915724 | None:intergenic |
| CAATTGAGGTCTATATTGCC+GGG | 0.582339 | 4.2:+36914653 | MS.gene003757:CDS |
| CCACCGGCCAATTCAGAAGA+CGG | 0.588469 | 4.2:+36915721 | MS.gene003757:CDS |
| TCTGGAATTGCATTCAACGC+CGG | 0.588676 | 4.2:-36914748 | None:intergenic |
| AAGGTCTTCGTTAAGATGAT+CGG | 0.592566 | 4.2:-36914691 | None:intergenic |
| CGGAGTGCCAGAGAAGGACC+CGG | 0.592882 | 4.2:-36914671 | None:intergenic |
| GATGCAAATGAAAATGGGAA+AGG | 0.596141 | 4.2:+36914775 | MS.gene003757:CDS |
| ATTGTTGGAAGAGTAGAGTC+CGG | 0.603903 | 4.2:-36914634 | None:intergenic |
| ACAAGAACAGCATACGCTGA+CGG | 0.606360 | 4.2:+36915579 | MS.gene003757:CDS |
| ACCAACACCAACCCTAACAC+CGG | 0.618909 | 4.2:-36915631 | None:intergenic |
| ATACGCTGACGGCGAAGATG+GGG | 0.629010 | 4.2:+36915590 | MS.gene003757:CDS |
| ACTGATAGTATAAGGATGAG+TGG | 0.634943 | 4.2:+36914433 | None:intergenic |
| CATGATGATGAGGATTATCA+CGG | 0.635768 | 4.2:+36915549 | MS.gene003757:CDS |
| GATGATCGGAGTGCCAGAGA+AGG | 0.637274 | 4.2:-36914677 | None:intergenic |
| CCGTCTTCTGAATTGGCCGG+TGG | 0.642624 | 4.2:-36915721 | None:intergenic |
| TTAGAATTATGTAACAGCAA+TGG | 0.648523 | 4.2:+36914508 | MS.gene003757:CDS |
| GAACTTTCATGGTTTAACGC+CGG | 0.650464 | 4.2:+36915612 | MS.gene003757:CDS |
| GTATGACAAACATGATGATG+AGG | 0.669080 | 4.2:+36915539 | MS.gene003757:CDS |
| ATACTCGTTAAATCATACCA+AGG | 0.711189 | 4.2:+36915696 | MS.gene003757:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AGCATTTACATAAAATAATA+AGG | - | chr4.2:36915501-36915520 | None:intergenic | 15.0% |
| !!! | AAATTTTTAAAATCTTGTCA+AGG | - | chr4.2:36915411-36915430 | None:intergenic | 15.0% |
| !! | ATTTAAATAAGCACATGAAA+AGG | - | chr4.2:36914847-36914866 | None:intergenic | 20.0% |
| !! | GATATAACTGTAAATTATCT+TGG | + | chr4.2:36915242-36915261 | MS.gene003757:intron | 20.0% |
| !!! | AGGAATTATCTATAATTTGT+TGG | - | chr4.2:36915481-36915500 | None:intergenic | 20.0% |
| !!! | GGAATTATCTATAATTTGTT+GGG | - | chr4.2:36915480-36915499 | None:intergenic | 20.0% |
| ! | AGAATGATGCAAATGAAAAT+GGG | + | chr4.2:36914770-36914789 | MS.gene003757:CDS | 25.0% |
| ! | ATATTTATGACCAAACCAAA+TGG | + | chr4.2:36915431-36915450 | MS.gene003757:intron | 25.0% |
| ! | GTTAGAGAATCAAATTCTAA+TGG | + | chr4.2:36914535-36914554 | MS.gene003757:CDS | 25.0% |
| ! | TTAGAATTATGTAACAGCAA+TGG | + | chr4.2:36914508-36914527 | MS.gene003757:CDS | 25.0% |
| ! | TTCTTCATAAGATTTCCATT+TGG | - | chr4.2:36915449-36915468 | None:intergenic | 25.0% |
| !! | ATTGCTGTTACATAATTCTA+AGG | - | chr4.2:36914509-36914528 | None:intergenic | 25.0% |
| !! | TACAAAGTGTTCTTAAATAG+TGG | + | chr4.2:36915017-36915036 | MS.gene003757:intron | 25.0% |
| !!! | TCTATAATTTGTTGGGAAAA+TGG | - | chr4.2:36915473-36915492 | None:intergenic | 25.0% |
| !!! | TTATTTTATGTAAATGCTGC+AGG | + | chr4.2:36915503-36915522 | MS.gene003757:intron | 25.0% |
| AAAGATAAGCTTCTTCTGTT+TGG | + | chr4.2:36914481-36914500 | MS.gene003757:CDS | 30.0% | |
| ATACTCGTTAAATCATACCA+AGG | + | chr4.2:36915696-36915715 | MS.gene003757:CDS | 30.0% | |
| ATTCAAGCAACAAGTTAACA+AGG | - | chr4.2:36914899-36914918 | None:intergenic | 30.0% | |
| CATAAGATTTCCATTTGGTT+TGG | - | chr4.2:36915444-36915463 | None:intergenic | 30.0% | |
| GAGAATGATGCAAATGAAAA+TGG | + | chr4.2:36914769-36914788 | MS.gene003757:CDS | 30.0% | |
| GTTCTCAAAAAAGACATACA+AGG | + | chr4.2:36914722-36914741 | MS.gene003757:CDS | 30.0% | |
| TGTTTGTCATACATGTAATC+TGG | - | chr4.2:36915531-36915550 | None:intergenic | 30.0% | |
| ! | CAAATTCTAATGGACAAAGT+TGG | + | chr4.2:36914545-36914564 | MS.gene003757:CDS | 30.0% |
| ! | GATTTGTTCAAATCCCTAAA+GGG | - | chr4.2:36914970-36914989 | None:intergenic | 30.0% |
| ! | TTTTCATTTGCATCATTCTC+TGG | - | chr4.2:36914769-36914788 | None:intergenic | 30.0% |
| !! | ATTGGCTCAACGTAATTTTA+TGG | + | chr4.2:36915127-36915146 | MS.gene003757:intron | 30.0% |
| !! | TTTTTGAGAACTAAGATGCA+AGG | - | chr4.2:36914713-36914732 | None:intergenic | 30.0% |
| AAAAAGACATACAAGGAAGC+CGG | + | chr4.2:36914729-36914748 | MS.gene003757:CDS | 35.0% | |
| AAGGTCTTCGTTAAGATGAT+CGG | - | chr4.2:36914694-36914713 | None:intergenic | 35.0% | |
| ACAATTGAGGTCTATATTGC+CGG | + | chr4.2:36914652-36914671 | MS.gene003757:CDS | 35.0% | |
| ATTATGTTCCATCTCCTACT+AGG | - | chr4.2:36915214-36915233 | None:intergenic | 35.0% | |
| ATTGGACTTAGTGTTTGTCT+TGG | + | chr4.2:36915654-36915673 | MS.gene003757:CDS | 35.0% | |
| CTTAGTGTTTGTCTTGGAAT+CGG | + | chr4.2:36915660-36915679 | MS.gene003757:CDS | 35.0% | |
| GATGCAAATGAAAATGGGAA+AGG | + | chr4.2:36914775-36914794 | MS.gene003757:CDS | 35.0% | |
| GCAATATAGACCTCAATTGT+TGG | - | chr4.2:36914652-36914671 | None:intergenic | 35.0% | |
| TGATATGCGATTGACAATAC+AGG | + | chr4.2:36915089-36915108 | MS.gene003757:intron | 35.0% | |
| TGTGAGTCGAATATAATTCC+AGG | + | chr4.2:36914577-36914596 | MS.gene003757:CDS | 35.0% | |
| TTTGAGAAATAGCTATCCTC+CGG | + | chr4.2:36915321-36915340 | MS.gene003757:intron | 35.0% | |
| ! | AACTATTTTCATCACTCGTC+AGG | - | chr4.2:36915387-36915406 | None:intergenic | 35.0% |
| ! | ATGCACTGACATAGTTAAAG+AGG | - | chr4.2:36914873-36914892 | None:intergenic | 35.0% |
| ! | CATGATGATGAGGATTATCA+CGG | + | chr4.2:36915549-36915568 | MS.gene003757:CDS | 35.0% |
| ! | CGATTTGTTCAAATCCCTAA+AGG | - | chr4.2:36914971-36914990 | None:intergenic | 35.0% |
| ! | GTATGACAAACATGATGATG+AGG | + | chr4.2:36915539-36915558 | MS.gene003757:CDS | 35.0% |
| !! | ATTATCTTGGCTCTTTTCTG+AGG | + | chr4.2:36915255-36915274 | MS.gene003757:intron | 35.0% |
| AATAGTGTATCGCAGAACAG+TGG | - | chr4.2:36914994-36915013 | None:intergenic | 40.0% | |
| AGAATAGCCGTCTTCTGAAT+TGG | - | chr4.2:36915731-36915750 | None:intergenic | 40.0% | |
| ATTGTTGGAAGAGTAGAGTC+CGG | - | chr4.2:36914637-36914656 | None:intergenic | 40.0% | |
| CAATTGAGGTCTATATTGCC+GGG | + | chr4.2:36914653-36914672 | MS.gene003757:CDS | 40.0% | |
| CGTATGCTGTTCTTGTGTAT+AGG | - | chr4.2:36915575-36915594 | None:intergenic | 40.0% | |
| CTCTACTCTTCCAACAATTG+AGG | + | chr4.2:36914639-36914658 | MS.gene003757:CDS | 40.0% | |
| GAACTTTCATGGTTTAACGC+CGG | + | chr4.2:36915612-36915631 | MS.gene003757:CDS | 40.0% | |
| GCTATGGCATTGTACTTTAG+TGG | + | chr4.2:36915041-36915060 | MS.gene003757:intron | 40.0% | |
| GGAGTCGTTTGAATATGACA+TGG | + | chr4.2:36915148-36915167 | MS.gene003757:intron | 40.0% | |
| GTTCTTAAATAGTGGCGCTA+TGG | + | chr4.2:36915025-36915044 | MS.gene003757:intron | 40.0% | |
| TCCAGGCACAAAGTTCTTTA+AGG | + | chr4.2:36914594-36914613 | MS.gene003757:CDS | 40.0% | |
| TCCTTAAAGAACTTTGTGCC+TGG | - | chr4.2:36914598-36914617 | None:intergenic | 40.0% | |
| ! | AGGTCTAGCGTTGCTTTAAT+TGG | + | chr4.2:36915109-36915128 | MS.gene003757:intron | 40.0% |
| ACAAGAACAGCATACGCTGA+CGG | + | chr4.2:36915579-36915598 | MS.gene003757:CDS | 45.0% | |
| ACTATAGCGCTATGCCCTTT+AGG | + | chr4.2:36914953-36914972 | MS.gene003757:intron | 45.0% | |
| AGTGCCGCAATTTGACAACA+CGG | - | chr4.2:36914936-36914955 | None:intergenic | 45.0% | |
| CTATAGCGCTATGCCCTTTA+GGG | + | chr4.2:36914954-36914973 | MS.gene003757:intron | 45.0% | |
| GACTCCGTGTTGTCAAATTG+CGG | + | chr4.2:36914929-36914948 | MS.gene003757:intron | 45.0% | |
| GACTGATGTCACAACCTAGT+AGG | + | chr4.2:36915197-36915216 | MS.gene003757:intron | 45.0% | |
| GTTTGTCTTGGAATCGGCAT+TGG | + | chr4.2:36915666-36915685 | MS.gene003757:CDS | 45.0% | |
| TGTCACAACCTAGTAGGAGA+TGG | + | chr4.2:36915203-36915222 | MS.gene003757:intron | 45.0% | |
| ! | AAATCATACCAAGGTGCCAC+CGG | + | chr4.2:36915705-36915724 | MS.gene003757:CDS | 45.0% |
| ! | ATGGTTTAACGCCGGTGTTA+GGG | + | chr4.2:36915620-36915639 | MS.gene003757:CDS | 45.0% |
| ! | GAGTGGTAGTGTGAAGTTTG+AGG | + | chr4.2:36914450-36914469 | MS.gene003757:CDS | 45.0% |
| ! | GGAGAAGCAATTGTTGTTGC+CGG | + | chr4.2:36914615-36914634 | MS.gene003757:CDS | 45.0% |
| ! | TCTGGAATTGCATTCAACGC+CGG | - | chr4.2:36914751-36914770 | None:intergenic | 45.0% |
| !! | GTTAGGGTTGGTGTTGGTAT+TGG | + | chr4.2:36915636-36915655 | MS.gene003757:CDS | 45.0% |
| ACCAACACCAACCCTAACAC+CGG | - | chr4.2:36915634-36915653 | None:intergenic | 50.0% | |
| CATGGTTTAACGCCGGTGTT+AGG | + | chr4.2:36915619-36915638 | MS.gene003757:CDS | 50.0% | |
| GCGAAGATGGGGAACTTTCA+TGG | + | chr4.2:36915601-36915620 | MS.gene003757:CDS | 50.0% | |
| TAGCCGTCTTCTGAATTGGC+CGG | - | chr4.2:36915727-36915746 | None:intergenic | 50.0% | |
| TATATTGCCGGGTCCTTCTC+TGG | + | chr4.2:36914664-36914683 | MS.gene003757:CDS | 50.0% | |
| TGACAACACGGAGTCACACA+TGG | - | chr4.2:36914924-36914943 | None:intergenic | 50.0% | |
| ! | CTTGGAATCGGCATTGGAGT+TGG | + | chr4.2:36915672-36915691 | MS.gene003757:CDS | 50.0% |
| ! | TTTAACGCCGGTGTTAGGGT+TGG | + | chr4.2:36915624-36915643 | MS.gene003757:CDS | 50.0% |
| ACCTGCAAAGCAAGCGCAGA+AGG | - | chr4.2:36914802-36914821 | None:intergenic | 55.0% | |
| ATACGCTGACGGCGAAGATG+GGG | + | chr4.2:36915590-36915609 | MS.gene003757:CDS | 55.0% | |
| CATACGCTGACGGCGAAGAT+GGG | + | chr4.2:36915589-36915608 | MS.gene003757:CDS | 55.0% | |
| CCACCGGCCAATTCAGAAGA+CGG | + | chr4.2:36915721-36915740 | MS.gene003757:CDS | 55.0% | |
| TCCTTCTGCGCTTGCTTTGC+AGG | + | chr4.2:36914798-36914817 | MS.gene003757:CDS | 55.0% | |
| ! | GATGATCGGAGTGCCAGAGA+AGG | - | chr4.2:36914680-36914699 | None:intergenic | 55.0% |
| CCGTCTTCTGAATTGGCCGG+TGG | - | chr4.2:36915724-36915743 | None:intergenic | 60.0% | |
| GCATACGCTGACGGCGAAGA+TGG | + | chr4.2:36915588-36915607 | MS.gene003757:CDS | 60.0% | |
| TGAATTGGCCGGTGGCACCT+TGG | - | chr4.2:36915716-36915735 | None:intergenic | 60.0% | |
| !! | GCCGGTGTTAGGGTTGGTGT+TGG | + | chr4.2:36915630-36915649 | MS.gene003757:CDS | 60.0% |
| GCCTGCATGTGCTCTCGAGC+CGG | - | chr4.2:36915343-36915362 | None:intergenic | 65.0% | |
| TGCATGTGCTCTCGAGCCGG+AGG | - | chr4.2:36915340-36915359 | None:intergenic | 65.0% | |
| ! | CGGAGTGCCAGAGAAGGACC+CGG | - | chr4.2:36914674-36914693 | None:intergenic | 65.0% |
| ! | TCCGGCTCGAGAGCACATGC+AGG | + | chr4.2:36915339-36915358 | MS.gene003757:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.2 | gene | 36914448 | 36915752 | 36914448 | ID=MS.gene003757 |
| chr4.2 | mRNA | 36914448 | 36915752 | 36914448 | ID=MS.gene003757.t1;Parent=MS.gene003757 |
| chr4.2 | exon | 36914448 | 36914819 | 36914448 | ID=MS.gene003757.t1.exon1;Parent=MS.gene003757.t1 |
| chr4.2 | CDS | 36914448 | 36914819 | 36914448 | ID=cds.MS.gene003757.t1;Parent=MS.gene003757.t1 |
| chr4.2 | exon | 36915525 | 36915752 | 36915525 | ID=MS.gene003757.t1.exon2;Parent=MS.gene003757.t1 |
| chr4.2 | CDS | 36915525 | 36915752 | 36915525 | ID=cds.MS.gene003757.t1;Parent=MS.gene003757.t1 |
| Gene Sequence |
| Protein sequence |
