Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene019686.t1 | XP_024629527.1 | 99.2 | 260 | 2 | 0 | 1 | 260 | 1 | 260 | 1.30E-144 | 522.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene019686.t1 | Q8GUH2 | 51.7 | 267 | 115 | 6 | 4 | 260 | 22 | 284 | 1.7e-68 | 260.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene019686.t1 | A0A072TZ44 | 99.2 | 260 | 2 | 0 | 1 | 260 | 1 | 260 | 9.2e-145 | 522.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene019686 | MS.gene23256 | PPI |
| MS.gene45677 | MS.gene019686 | PPI |
| MS.gene056706 | MS.gene019686 | PPI |
| MS.gene003757 | MS.gene019686 | PPI |
| MS.gene003751 | MS.gene019686 | PPI |
| MS.gene23257 | MS.gene019686 | PPI |
| MS.gene003753 | MS.gene019686 | PPI |
| MS.gene50027 | MS.gene019686 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene019686.t1 | MTR_8g028630 | 99.231 | 260 | 2 | 0 | 1 | 260 | 1 | 260 | 0.0 | 530 |
| MS.gene019686.t1 | MTR_4g070020 | 36.059 | 269 | 147 | 7 | 3 | 260 | 14 | 268 | 5.51e-40 | 140 |
| MS.gene019686.t1 | MTR_4g070020 | 39.623 | 212 | 114 | 5 | 3 | 204 | 14 | 221 | 2.03e-39 | 137 |
| MS.gene019686.t1 | MTR_1g022190 | 38.235 | 204 | 117 | 6 | 26 | 227 | 68 | 264 | 6.48e-35 | 126 |
| MS.gene019686.t1 | MTR_1g022190 | 35.714 | 238 | 139 | 8 | 26 | 260 | 43 | 269 | 6.38e-34 | 125 |
| MS.gene019686.t1 | MTR_1g022190 | 35.714 | 238 | 139 | 8 | 26 | 260 | 68 | 294 | 9.86e-34 | 125 |
| MS.gene019686.t1 | MTR_1g022190 | 35.714 | 238 | 139 | 8 | 26 | 260 | 73 | 299 | 1.28e-33 | 124 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene019686.t1 | AT1G01500 | 54.065 | 246 | 101 | 5 | 25 | 260 | 41 | 284 | 1.34e-87 | 263 |
| MS.gene019686.t1 | AT1G19400 | 44.330 | 194 | 94 | 5 | 21 | 204 | 28 | 217 | 4.09e-43 | 147 |
| MS.gene019686.t1 | AT1G19400 | 42.512 | 207 | 104 | 5 | 8 | 204 | 16 | 217 | 3.94e-42 | 146 |
| MS.gene019686.t1 | AT1G19400 | 42.512 | 207 | 104 | 5 | 8 | 204 | 16 | 217 | 3.94e-42 | 146 |
| MS.gene019686.t1 | AT1G19400 | 42.512 | 207 | 104 | 5 | 8 | 204 | 16 | 217 | 3.94e-42 | 146 |
| MS.gene019686.t1 | AT1G75180 | 35.918 | 245 | 128 | 7 | 31 | 260 | 42 | 272 | 1.87e-37 | 134 |
| MS.gene019686.t1 | AT1G75180 | 35.918 | 245 | 128 | 7 | 31 | 260 | 42 | 272 | 1.87e-37 | 134 |
| MS.gene019686.t1 | AT1G75180 | 40.642 | 187 | 94 | 4 | 31 | 204 | 42 | 224 | 4.71e-36 | 129 |
| MS.gene019686.t1 | AT1G75180 | 39.336 | 211 | 106 | 6 | 31 | 223 | 42 | 248 | 1.60e-35 | 128 |
Find 76 sgRNAs with CRISPR-Local
Find 218 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGTTCCTAGACATGCTATTT+TGG | 0.221283 | 8.2:-68099274 | MS.gene019686:CDS |
| CGGAAGCGGTGGGGCGGAAG+AGG | 0.258564 | 8.2:+68099632 | None:intergenic |
| AAATGGGTCTGGTTGGGATA+TGG | 0.259376 | 8.2:-68099457 | MS.gene019686:CDS |
| GGAACGTTTGGATGTTGATT+TGG | 0.306297 | 8.2:-68099481 | MS.gene019686:CDS |
| TATGTTGCTGGATGTTGTTC+TGG | 0.312352 | 8.2:-68099345 | MS.gene019686:CDS |
| GCCATGATCTATGACTCTTT+AGG | 0.320834 | 8.2:+68099787 | None:intergenic |
| CCATGATCTATGACTCTTTA+GGG | 0.320915 | 8.2:+68099788 | None:intergenic |
| AATGATATCTTGCAGATAAC+AGG | 0.328847 | 8.2:-68096792 | MS.gene019686:intron |
| TAGGCCGAAGCTCGGTGTTT+CGG | 0.355279 | 8.2:-68099385 | MS.gene019686:CDS |
| TTGGATGTTGATTTGGGAAA+TGG | 0.363888 | 8.2:-68099474 | MS.gene019686:CDS |
| TCGGTTGAAGTTTATGTTGC+TGG | 0.364418 | 8.2:-68099357 | MS.gene019686:CDS |
| GAACGTTTGGATGTTGATTT+GGG | 0.367055 | 8.2:-68099480 | MS.gene019686:CDS |
| ATTTGGGAAATGGGTCTGGT+TGG | 0.371436 | 8.2:-68099464 | MS.gene019686:CDS |
| TACTCTCAAGAAATGTATCT+TGG | 0.371896 | 8.2:-68096720 | MS.gene019686:CDS |
| GTTGATTTGGGAAATGGGTC+TGG | 0.376873 | 8.2:-68099468 | MS.gene019686:CDS |
| CATATGCATTTCCTCATCTT+CGG | 0.377051 | 8.2:+68099242 | None:intergenic |
| GTTGATGATTATGATCTTGA+TGG | 0.384587 | 8.2:-68096762 | MS.gene019686:CDS |
| TTTGGGAAATGGGTCTGGTT+GGG | 0.394439 | 8.2:-68099463 | MS.gene019686:CDS |
| AGACTATTTCGTTGAGTCCT+AGG | 0.401816 | 8.2:-68099302 | MS.gene019686:CDS |
| GTGACATAGTGTTAAACATT+CGG | 0.402805 | 8.2:+68099710 | None:intergenic |
| GGTGGGGCGGAAGAGGGTGC+AGG | 0.410497 | 8.2:+68099639 | None:intergenic |
| ATCAATTGGATCGGGTTCTT+CGG | 0.413140 | 8.2:-68099415 | MS.gene019686:CDS |
| CATGTGGCGGTTGGATCAAT+TGG | 0.413914 | 8.2:-68099429 | MS.gene019686:CDS |
| ATGTGGGTCATTGGAACGTT+TGG | 0.415837 | 8.2:-68099493 | MS.gene019686:CDS |
| AATTCCACACCCCAAATTGC+AGG | 0.417732 | 8.2:-68099184 | MS.gene019686:intron |
| GTTGTTTCTATGTGGGTCAT+TGG | 0.422646 | 8.2:-68099502 | MS.gene019686:CDS |
| ATATGCATTTCCTCATCTTC+GGG | 0.432151 | 8.2:+68099243 | None:intergenic |
| TGTCACCCAAAACGTGAAAT+CGG | 0.449971 | 8.2:-68099693 | MS.gene019686:CDS |
| GCGGAAGAGGGTGCAGGGAT+CGG | 0.458905 | 8.2:+68099645 | None:intergenic |
| TGACATAGTGTTAAACATTC+GGG | 0.462884 | 8.2:+68099711 | None:intergenic |
| CGGTCACGGCGGAGCGGAAG+CGG | 0.465550 | 8.2:+68099618 | None:intergenic |
| GCTCGGTGTTTCGGCTCCAT+CGG | 0.467166 | 8.2:-68099376 | MS.gene019686:CDS |
| TGGATGTTGATTTGGGAAAT+GGG | 0.473071 | 8.2:-68099473 | MS.gene019686:CDS |
| TCACGGCGGAGCGGAAGCGG+TGG | 0.478934 | 8.2:+68099621 | None:intergenic |
| ACGGCGGAGCGGAAGCGGTG+GGG | 0.485355 | 8.2:+68099623 | None:intergenic |
| GCGGTTGGATCAATTGGATC+GGG | 0.487227 | 8.2:-68099423 | MS.gene019686:CDS |
| AGATGAGGAAATGCATATGA+TGG | 0.488245 | 8.2:-68099238 | MS.gene019686:CDS |
| CACAGGTGGTGCTGAATTTG+AGG | 0.489245 | 8.2:-68099541 | MS.gene019686:CDS |
| GGAGCCGAAACACCGAGCTT+CGG | 0.493318 | 8.2:+68099381 | None:intergenic |
| TTGAGGTGTATGAGAAAGAT+GGG | 0.495788 | 8.2:-68099524 | MS.gene019686:CDS |
| GGCGGTTGGATCAATTGGAT+CGG | 0.495806 | 8.2:-68099424 | MS.gene019686:CDS |
| CACGGCGGAGCGGAAGCGGT+GGG | 0.497443 | 8.2:+68099622 | None:intergenic |
| CCCTAAAGAGTCATAGATCA+TGG | 0.503100 | 8.2:-68099788 | MS.gene019686:CDS |
| ACTGATAATGTGAGAATCAC+AGG | 0.510457 | 8.2:-68099558 | MS.gene019686:CDS |
| GCGGAGCGGAAGCGGTGGGG+CGG | 0.513735 | 8.2:+68099626 | None:intergenic |
| GATCATGTTAGTGCTATGAA+TGG | 0.524460 | 8.2:-68099210 | MS.gene019686:CDS |
| TTTGAGGTGTATGAGAAAGA+TGG | 0.524992 | 8.2:-68099525 | MS.gene019686:CDS |
| GTGGGGCGGAAGAGGGTGCA+GGG | 0.542253 | 8.2:+68099640 | None:intergenic |
| GCATCCAAAATAGCATGTCT+AGG | 0.543181 | 8.2:+68099270 | None:intergenic |
| TGTCTAGGAACTCTCCTCCT+AGG | 0.545690 | 8.2:+68099285 | None:intergenic |
| GGAAGCGGTGGGGCGGAAGA+GGG | 0.549741 | 8.2:+68099633 | None:intergenic |
| AGTACCTGCAATTTGGGGTG+TGG | 0.556500 | 8.2:+68099180 | None:intergenic |
| ATGGATTGTCATGTGGCGGT+TGG | 0.565137 | 8.2:-68099438 | MS.gene019686:CDS |
| GGAAATGCATATGATGGAGA+AGG | 0.566177 | 8.2:-68099232 | MS.gene019686:CDS |
| AAGATGGGTTGTTTCTATGT+GGG | 0.574943 | 8.2:-68099509 | MS.gene019686:CDS |
| GGATGCTATTCCCGAAGATG+AGG | 0.575827 | 8.2:-68099253 | MS.gene019686:CDS |
| AAAGATGGGTTGTTTCTATG+TGG | 0.576123 | 8.2:-68099510 | MS.gene019686:CDS |
| ATAGTCTTGCTCAAAATCAC+AGG | 0.588822 | 8.2:+68099318 | None:intergenic |
| GAAATGTATCTTGGCGAGGA+CGG | 0.589890 | 8.2:-68096711 | MS.gene019686:CDS |
| TTATGATCTTGATGGAAAGA+TGG | 0.594061 | 8.2:-68096754 | MS.gene019686:CDS |
| CACATTATCAGTGCTAACAT+AGG | 0.596347 | 8.2:+68099569 | None:intergenic |
| ACTCTTTATCGACACGGTCA+CGG | 0.610515 | 8.2:+68099604 | None:intergenic |
| GCAACATAAACTTCAACCGA+TGG | 0.620064 | 8.2:+68099360 | None:intergenic |
| ATGATATCTTGCAGATAACA+GGG | 0.625252 | 8.2:-68096791 | MS.gene019686:intron |
| TCAAGAAATGTATCTTGGCG+AGG | 0.631882 | 8.2:-68096715 | MS.gene019686:CDS |
| CTTGATGGAAAGATGGCGAA+TGG | 0.632312 | 8.2:-68096747 | MS.gene019686:CDS |
| CTATTTCGTTGAGTCCTAGG+AGG | 0.636486 | 8.2:-68099299 | MS.gene019686:CDS |
| GCGAGGACGGACAACTCACA+TGG | 0.636839 | 8.2:-68096698 | None:intergenic |
| CAGCAGACTCTTTATCGACA+CGG | 0.638869 | 8.2:+68099598 | None:intergenic |
| GGATATGGATTGTCATGTGG+CGG | 0.640013 | 8.2:-68099442 | MS.gene019686:CDS |
| TTGGGATATGGATTGTCATG+TGG | 0.651885 | 8.2:-68099445 | MS.gene019686:CDS |
| TCGACACGGTCACGGCGGAG+CGG | 0.673707 | 8.2:+68099612 | None:intergenic |
| TGTCGATAAAGAGTCTGCTG+AGG | 0.707994 | 8.2:-68099595 | MS.gene019686:CDS |
| GGAACACTATCGATTAAACA+AGG | 0.709929 | 8.2:+68099732 | None:intergenic |
| CTTTATCGACACGGTCACGG+CGG | 0.771016 | 8.2:+68099607 | None:intergenic |
| GATAATGTGAGAATCACAGG+TGG | 0.820260 | 8.2:-68099555 | MS.gene019686:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATCAATATCTTTTAATTTT+AGG | - | chr8.2:68098386-68098405 | MS.gene019686:intron | 10.0% |
| !!! | AAAAATATTTGCCATTTTTT+TGG | - | chr8.2:68098810-68098829 | MS.gene019686:intron | 15.0% |
| !! | AAATGAATAAAATGCTTCTT+AGG | + | chr8.2:68097404-68097423 | None:intergenic | 20.0% |
| !! | ATTTCTCAATTTAAACAAGT+AGG | - | chr8.2:68097431-68097450 | MS.gene019686:intron | 20.0% |
| !! | TTAACATAATTGCATAATGA+AGG | + | chr8.2:68099560-68099579 | None:intergenic | 20.0% |
| !! | TTGAATTGTAAAAAAGTTTG+TGG | - | chr8.2:68097487-68097506 | MS.gene019686:intron | 20.0% |
| !! | TTGATTACAAATGTCAAATA+AGG | + | chr8.2:68098372-68098391 | None:intergenic | 20.0% |
| !!! | AACATTTTTATACTACAATC+CGG | - | chr8.2:68098153-68098172 | MS.gene019686:intron | 20.0% |
| !!! | AATCCATGATAACTTATTTT+AGG | + | chr8.2:68098883-68098902 | None:intergenic | 20.0% |
| !!! | ATCCATGATAACTTATTTTA+GGG | + | chr8.2:68098882-68098901 | None:intergenic | 20.0% |
| !!! | ATTTTTGATTGAGGTATTTT+AGG | - | chr8.2:68099373-68099392 | MS.gene019686:CDS | 20.0% |
| !!! | GTTTAAATTTCAAGAGATTT+TGG | + | chr8.2:68099348-68099367 | None:intergenic | 20.0% |
| !!! | GTTTTATTTGTTGAGTTTAA+TGG | - | chr8.2:68097457-68097476 | MS.gene019686:intron | 20.0% |
| !!! | TTAGGCATATATTTTTCTTA+AGG | - | chr8.2:68098404-68098423 | MS.gene019686:intron | 20.0% |
| ! | AAAATCACTTTCGATTGAAA+TGG | - | chr8.2:68097636-68097655 | MS.gene019686:intron | 25.0% |
| ! | AAACTCAAAATGCTATAGAA+AGG | + | chr8.2:68098331-68098350 | None:intergenic | 25.0% |
| ! | ACAAAGAAAAGAAGTTCAAT+AGG | - | chr8.2:68098664-68098683 | MS.gene019686:intron | 25.0% |
| ! | AGTCTTTACAAAACATGTAT+TGG | - | chr8.2:68099229-68099248 | MS.gene019686:CDS | 25.0% |
| ! | ATAAAACTATCGCTACATAA+AGG | + | chr8.2:68098103-68098122 | None:intergenic | 25.0% |
| ! | ATAAGGAATAACTGAAAGAA+GGG | + | chr8.2:68099112-68099131 | None:intergenic | 25.0% |
| ! | CAATCACAATAAGATACAAT+TGG | + | chr8.2:68097518-68097537 | None:intergenic | 25.0% |
| ! | GTCTATTATTGTCAGTTAAT+GGG | + | chr8.2:68098607-68098626 | None:intergenic | 25.0% |
| ! | TAATCACTCTCTCTATTTAT+AGG | - | chr8.2:68098559-68098578 | MS.gene019686:intron | 25.0% |
| ! | TACCCTAAAATAAGTTATCA+TGG | - | chr8.2:68098877-68098896 | MS.gene019686:intron | 25.0% |
| ! | TAGAAAGTTGAGTAATTTCA+CGG | + | chr8.2:68099607-68099626 | None:intergenic | 25.0% |
| ! | TTTATGTAGATGTTACTGAT+AGG | + | chr8.2:68098629-68098648 | None:intergenic | 25.0% |
| !! | AAGTTATCATGGATTAAGTT+TGG | - | chr8.2:68098888-68098907 | MS.gene019686:intron | 25.0% |
| !! | AGTTATCATGGATTAAGTTT+GGG | - | chr8.2:68098889-68098908 | MS.gene019686:intron | 25.0% |
| !! | ATACATGTTTTGTAAAGACT+AGG | + | chr8.2:68099229-68099248 | None:intergenic | 25.0% |
| !! | TACATGTTTTGTAAAGACTA+GGG | + | chr8.2:68099228-68099247 | None:intergenic | 25.0% |
| !! | TAGATATGTTTGCTAATAGA+GGG | - | chr8.2:68098433-68098452 | MS.gene019686:intron | 25.0% |
| !! | TTAGATATGTTTGCTAATAG+AGG | - | chr8.2:68098432-68098451 | MS.gene019686:intron | 25.0% |
| !! | TTCCTTATGCTTTTAATCAA+AGG | - | chr8.2:68099124-68099143 | MS.gene019686:intron | 25.0% |
| !!! | AAACATCAGATTTTTGATTG+AGG | - | chr8.2:68099364-68099383 | MS.gene019686:CDS | 25.0% |
| !!! | AGTTTTAATTAACACTTTCG+AGG | - | chr8.2:68098346-68098365 | MS.gene019686:intron | 25.0% |
| !!! | TTTATGTAGCGATAGTTTTA+TGG | - | chr8.2:68098102-68098121 | MS.gene019686:intron | 25.0% |
| AAAAACATCATAACAGTGCT+TGG | - | chr8.2:68099409-68099428 | MS.gene019686:CDS | 30.0% | |
| AAAACATCATAACAGTGCTT+GGG | - | chr8.2:68099410-68099429 | MS.gene019686:CDS | 30.0% | |
| AATGATATCTTGCAGATAAC+AGG | - | chr8.2:68099750-68099769 | MS.gene019686:CDS | 30.0% | |
| ATAGCTATTTGATCAACTTC+AGG | + | chr8.2:68097790-68097809 | None:intergenic | 30.0% | |
| ATGATATCTTGCAGATAACA+GGG | - | chr8.2:68099751-68099770 | MS.gene019686:CDS | 30.0% | |
| CATAAGGAATAACTGAAAGA+AGG | + | chr8.2:68099113-68099132 | None:intergenic | 30.0% | |
| CCAAATGATTGACAATTTAC+AGG | + | chr8.2:68098293-68098312 | None:intergenic | 30.0% | |
| CCTGTAAATTGTCAATCATT+TGG | - | chr8.2:68098290-68098309 | MS.gene019686:intron | 30.0% | |
| CTAATAAGCTGTTTAGATCA+GGG | - | chr8.2:68098024-68098043 | MS.gene019686:intron | 30.0% | |
| CTGAAATGTTAAACCTTTCA+GGG | + | chr8.2:68097919-68097938 | None:intergenic | 30.0% | |
| GAGTTTATCACTATTAGCAT+TGG | + | chr8.2:68098983-68099002 | None:intergenic | 30.0% | |
| GGTCTATTATTGTCAGTTAA+TGG | + | chr8.2:68098608-68098627 | None:intergenic | 30.0% | |
| GTGACATAGTGTTAAACATT+CGG | + | chr8.2:68096835-68096854 | None:intergenic | 30.0% | |
| TAAGGAATAACTGAAAGAAG+GGG | + | chr8.2:68099111-68099130 | None:intergenic | 30.0% | |
| TACTCTCAAGAAATGTATCT+TGG | - | chr8.2:68099822-68099841 | MS.gene019686:CDS | 30.0% | |
| TCTAATAAGCTGTTTAGATC+AGG | - | chr8.2:68098023-68098042 | MS.gene019686:intron | 30.0% | |
| TGACATAGTGTTAAACATTC+GGG | + | chr8.2:68096834-68096853 | None:intergenic | 30.0% | |
| TTATGATCTTGATGGAAAGA+TGG | - | chr8.2:68099788-68099807 | MS.gene019686:CDS | 30.0% | |
| TTCACAGTCTGTCAATATAT+CGG | - | chr8.2:68099658-68099677 | MS.gene019686:CDS | 30.0% | |
| ! | AAATAGCTATTTCGTGCTAT+AGG | - | chr8.2:68097800-68097819 | MS.gene019686:intron | 30.0% |
| ! | AGAGCTTTTGACCAAAAAAA+TGG | + | chr8.2:68098824-68098843 | None:intergenic | 30.0% |
| ! | AGCCTTTGATTAAAAGCATA+AGG | + | chr8.2:68099129-68099148 | None:intergenic | 30.0% |
| ! | GGTTTTTCTCTTGTAATCAA+CGG | - | chr8.2:68096870-68096889 | MS.gene019686:intron | 30.0% |
| ! | TGCCTTTGTTTGTAATCAAA+GGG | + | chr8.2:68098508-68098527 | None:intergenic | 30.0% |
| ! | TTGCCTTTGTTTGTAATCAA+AGG | + | chr8.2:68098509-68098528 | None:intergenic | 30.0% |
| ! | TTTGTTAATGAACCCTGTTT+TGG | - | chr8.2:68098760-68098779 | MS.gene019686:intron | 30.0% |
| !! | AAAAAAGTACCTGCAATTTG+GGG | + | chr8.2:68097370-68097389 | None:intergenic | 30.0% |
| !! | AAAAACCGATTTCACGTTTT+GGG | + | chr8.2:68096857-68096876 | None:intergenic | 30.0% |
| !! | CAAAAAAGTACCTGCAATTT+GGG | + | chr8.2:68097371-68097390 | None:intergenic | 30.0% |
| !! | GTTGATGATTATGATCTTGA+TGG | - | chr8.2:68099780-68099799 | MS.gene019686:CDS | 30.0% |
| !! | TTATTGTCAGTTAATGGGTT+AGG | + | chr8.2:68098602-68098621 | None:intergenic | 30.0% |
| !!! | AATGTCGCTTTTGATTGAAA+TGG | - | chr8.2:68097586-68097605 | MS.gene019686:intron | 30.0% |
| !!! | ATAGTAGTGTTTTAGCATTG+CGG | - | chr8.2:68097664-68097683 | MS.gene019686:intron | 30.0% |
| !!! | CTCAACTTTCTACTTTTTGT+TGG | - | chr8.2:68099615-68099634 | MS.gene019686:CDS | 30.0% |
| AAACAAAGGCAACACTTCAA+GGG | - | chr8.2:68098517-68098536 | MS.gene019686:intron | 35.0% | |
| AGAGAGTCTCGCAATAAAAA+AGG | - | chr8.2:68098261-68098280 | MS.gene019686:intron | 35.0% | |
| AGATGAGGAAATGCATATGA+TGG | - | chr8.2:68097304-68097323 | MS.gene019686:intron | 35.0% | |
| ATAGAGAGAGTGATTAGAGA+AGG | + | chr8.2:68098555-68098574 | None:intergenic | 35.0% | |
| ATATGCATTTCCTCATCTTC+GGG | + | chr8.2:68097302-68097321 | None:intergenic | 35.0% | |
| ATCGGAGATTCATTCTTACT+AGG | + | chr8.2:68098195-68098214 | None:intergenic | 35.0% | |
| CACATTATCAGTGCTAACAT+AGG | + | chr8.2:68096976-68096995 | None:intergenic | 35.0% | |
| CAGCAATCACAAAAGAGAAT+AGG | + | chr8.2:68099053-68099072 | None:intergenic | 35.0% | |
| CATATGCATTTCCTCATCTT+CGG | + | chr8.2:68097303-68097322 | None:intergenic | 35.0% | |
| CCATATTCTTATCGAAGATG+GGG | - | chr8.2:68098475-68098494 | MS.gene019686:intron | 35.0% | |
| CCATGATCTATGACTCTTTA+GGG | + | chr8.2:68096757-68096776 | None:intergenic | 35.0% | |
| GAATTTCCAATCTCATCAGA+AGG | + | chr8.2:68099326-68099345 | None:intergenic | 35.0% | |
| GAGAGTCTCGCAATAAAAAA+GGG | - | chr8.2:68098262-68098281 | MS.gene019686:intron | 35.0% | |
| GATCATGTTAGTGCTATGAA+TGG | - | chr8.2:68097332-68097351 | MS.gene019686:intron | 35.0% | |
| GCCATATTCTTATCGAAGAT+GGG | - | chr8.2:68098474-68098493 | MS.gene019686:intron | 35.0% | |
| GCTGAAATGTTAAACCTTTC+AGG | + | chr8.2:68097920-68097939 | None:intergenic | 35.0% | |
| GGTGCTCTTAGTAGATAATT+AGG | - | chr8.2:68098938-68098957 | MS.gene019686:intron | 35.0% | |
| GTAAGAATGAATCTCCGATT+TGG | - | chr8.2:68098196-68098215 | MS.gene019686:intron | 35.0% | |
| GTTCATTAACAAACCAGCAA+CGG | + | chr8.2:68098753-68098772 | None:intergenic | 35.0% | |
| TACAACTGCTGAAACCAAAT+CGG | + | chr8.2:68098213-68098232 | None:intergenic | 35.0% | |
| TAGAGAGAGTGATTAGAGAA+GGG | + | chr8.2:68098554-68098573 | None:intergenic | 35.0% | |
| TCCCCTTTGATTACAAACAA+AGG | - | chr8.2:68098503-68098522 | MS.gene019686:intron | 35.0% | |
| TGCCATATTCTTATCGAAGA+TGG | - | chr8.2:68098473-68098492 | MS.gene019686:intron | 35.0% | |
| TTCGATAAGAATATGGCAGT+TGG | + | chr8.2:68098471-68098490 | None:intergenic | 35.0% | |
| TTGAGGTGTATGAGAAAGAT+GGG | - | chr8.2:68097018-68097037 | MS.gene019686:intron | 35.0% | |
| TTGTCTAATTTGACCACTTC+CGG | + | chr8.2:68098847-68098866 | None:intergenic | 35.0% | |
| ! | ACTGATAATGTGAGAATCAC+AGG | - | chr8.2:68096984-68097003 | MS.gene019686:intron | 35.0% |
| ! | ATAGTCTTGCTCAAAATCAC+AGG | + | chr8.2:68097227-68097246 | None:intergenic | 35.0% |
| ! | ATGCTTTTAATCAAAGGCTG+AGG | - | chr8.2:68099130-68099149 | MS.gene019686:intron | 35.0% |
| ! | CAACTTTTGTCGAATGTTCT+AGG | - | chr8.2:68097559-68097578 | MS.gene019686:intron | 35.0% |
| ! | GCCTTTGTTTGTAATCAAAG+GGG | + | chr8.2:68098507-68098526 | None:intergenic | 35.0% |
| ! | GGAACACTATCGATTAAACA+AGG | + | chr8.2:68096813-68096832 | None:intergenic | 35.0% |
| ! | TATAGGCAGCATGCTTTATT+TGG | - | chr8.2:68098576-68098595 | MS.gene019686:intron | 35.0% |
| ! | TGCGAGACTCTCTTATTTAA+AGG | + | chr8.2:68098254-68098273 | None:intergenic | 35.0% |
| ! | TTTGAGGTGTATGAGAAAGA+TGG | - | chr8.2:68097017-68097036 | MS.gene019686:intron | 35.0% |
| !! | AAAGATGGGTTGTTTCTATG+TGG | - | chr8.2:68097032-68097051 | MS.gene019686:intron | 35.0% |
| !! | AAGATGGGTTGTTTCTATGT+GGG | - | chr8.2:68097033-68097052 | MS.gene019686:intron | 35.0% |
| !! | AGTTCCTAGACATGCTATTT+TGG | - | chr8.2:68097268-68097287 | MS.gene019686:intron | 35.0% |
| !! | CCAAAAAAGTACCTGCAATT+TGG | + | chr8.2:68097372-68097391 | None:intergenic | 35.0% |
| !! | GAAAAACCGATTTCACGTTT+TGG | + | chr8.2:68096858-68096877 | None:intergenic | 35.0% |
| !! | GAACGTTTGGATGTTGATTT+GGG | - | chr8.2:68097062-68097081 | MS.gene019686:intron | 35.0% |
| !! | TGGATGTTGATTTGGGAAAT+GGG | - | chr8.2:68097069-68097088 | MS.gene019686:intron | 35.0% |
| !! | TTGGATGTTGATTTGGGAAA+TGG | - | chr8.2:68097068-68097087 | MS.gene019686:intron | 35.0% |
| !!! | AGCTGGAAAGCTTTCTTTTT+TGG | - | chr8.2:68098784-68098803 | MS.gene019686:intron | 35.0% |
| !!! | CCAAATTGCAGGTACTTTTT+TGG | - | chr8.2:68097369-68097388 | MS.gene019686:intron | 35.0% |
| !!! | TTTTTTGGTCAAAAGCTCTC+CGG | - | chr8.2:68098825-68098844 | MS.gene019686:intron | 35.0% |
| AGACTATTTCGTTGAGTCCT+AGG | - | chr8.2:68097240-68097259 | MS.gene019686:intron | 40.0% | |
| ATCAATTGGATCGGGTTCTT+CGG | - | chr8.2:68097127-68097146 | MS.gene019686:intron | 40.0% | |
| CAAACAAAGGCAACACTTCA+AGG | - | chr8.2:68098516-68098535 | MS.gene019686:intron | 40.0% | |
| CCCCATCTTCGATAAGAATA+TGG | + | chr8.2:68098478-68098497 | None:intergenic | 40.0% | |
| CCCTAAAGAGTCATAGATCA+TGG | - | chr8.2:68096754-68096773 | MS.gene019686:CDS | 40.0% | |
| CTATTGACAACACTGACAGA+AGG | + | chr8.2:68099162-68099181 | None:intergenic | 40.0% | |
| GACTCAATATTGGTACAGTG+AGG | + | chr8.2:68099495-68099514 | None:intergenic | 40.0% | |
| GATAATGTGAGAATCACAGG+TGG | - | chr8.2:68096987-68097006 | MS.gene019686:intron | 40.0% | |
| GCAACATAAACTTCAACCGA+TGG | + | chr8.2:68097185-68097204 | None:intergenic | 40.0% | |
| GCATCCAAAATAGCATGTCT+AGG | + | chr8.2:68097275-68097294 | None:intergenic | 40.0% | |
| GCCATGATCTATGACTCTTT+AGG | + | chr8.2:68096758-68096777 | None:intergenic | 40.0% | |
| TATGTTGCTGGATGTTGTTC+TGG | - | chr8.2:68097197-68097216 | MS.gene019686:intron | 40.0% | |
| TCAAGAAATGTATCTTGGCG+AGG | - | chr8.2:68099827-68099846 | MS.gene019686:CDS | 40.0% | |
| TCCCAAATAACAGCTGTTTG+TGG | - | chr8.2:68099284-68099303 | MS.gene019686:CDS | 40.0% | |
| TCGGTTGAAGTTTATGTTGC+TGG | - | chr8.2:68097185-68097204 | MS.gene019686:intron | 40.0% | |
| TCTGAGCTATGTATGACACA+TGG | - | chr8.2:68097843-68097862 | MS.gene019686:intron | 40.0% | |
| TGAGTAATTTCACGGAGAAG+CGG | + | chr8.2:68099599-68099618 | None:intergenic | 40.0% | |
| TGGCTATAGTCGAATGTTCT+AGG | - | chr8.2:68097609-68097628 | MS.gene019686:intron | 40.0% | |
| TGTATGACACATGGAGAACT+AGG | - | chr8.2:68097852-68097871 | MS.gene019686:intron | 40.0% | |
| TGTCACCCAAAACGTGAAAT+CGG | - | chr8.2:68096849-68096868 | MS.gene019686:intron | 40.0% | |
| TTGTCAATAGTGCGCTATAC+CGG | - | chr8.2:68099172-68099191 | MS.gene019686:intron | 40.0% | |
| TTTGATCAACTTCAGGTACG+TGG | + | chr8.2:68097783-68097802 | None:intergenic | 40.0% | |
| ! | GATTTGGTTTCAGCAGTTGT+AGG | - | chr8.2:68098212-68098231 | MS.gene019686:intron | 40.0% |
| ! | GCCACAAACAGCTGTTATTT+GGG | + | chr8.2:68099288-68099307 | None:intergenic | 40.0% |
| ! | GGAAATGCATATGATGGAGA+AGG | - | chr8.2:68097310-68097329 | MS.gene019686:intron | 40.0% |
| ! | GGAACGTTTGGATGTTGATT+TGG | - | chr8.2:68097061-68097080 | MS.gene019686:intron | 40.0% |
| ! | TTGGGATATGGATTGTCATG+TGG | - | chr8.2:68097097-68097116 | MS.gene019686:intron | 40.0% |
| !! | AAGAGCACCACATAAACCAA+GGG | + | chr8.2:68098927-68098946 | None:intergenic | 40.0% |
| !! | AGGTAGTGAAAGTACTAGAC+CGG | + | chr8.2:68098175-68098194 | None:intergenic | 40.0% |
| !! | GTTGTTTCTATGTGGGTCAT+TGG | - | chr8.2:68097040-68097059 | MS.gene019686:intron | 40.0% |
| !! | TAAGAGCACCACATAAACCA+AGG | + | chr8.2:68098928-68098947 | None:intergenic | 40.0% |
| !!! | GTCGCTTTTGATTGAAATGG+TGG | - | chr8.2:68097589-68097608 | MS.gene019686:intron | 40.0% |
| AAATGGGTCTGGTTGGGATA+TGG | - | chr8.2:68097085-68097104 | MS.gene019686:intron | 45.0% | |
| AATTCCACACCCCAAATTGC+AGG | - | chr8.2:68097358-68097377 | MS.gene019686:intron | 45.0% | |
| ACTCTTTATCGACACGGTCA+CGG | + | chr8.2:68096941-68096960 | None:intergenic | 45.0% | |
| AGAGAGTGATTAGAGAAGGG+AGG | + | chr8.2:68098551-68098570 | None:intergenic | 45.0% | |
| AGCTTTCCAGCTTCCAAAAC+AGG | + | chr8.2:68098776-68098795 | None:intergenic | 45.0% | |
| AGTGAGGTAGCAAATGCAAC+TGG | + | chr8.2:68099479-68099498 | None:intergenic | 45.0% | |
| AGTGATTAGAGAAGGGAGGT+AGG | + | chr8.2:68098547-68098566 | None:intergenic | 45.0% | |
| ATGTGGGTCATTGGAACGTT+TGG | - | chr8.2:68097049-68097068 | MS.gene019686:intron | 45.0% | |
| ATTTGGGAAATGGGTCTGGT+TGG | - | chr8.2:68097078-68097097 | MS.gene019686:intron | 45.0% | |
| CAGCAGACTCTTTATCGACA+CGG | + | chr8.2:68096947-68096966 | None:intergenic | 45.0% | |
| CCAGTTCAGCATACAACACT+CGG | + | chr8.2:68099024-68099043 | None:intergenic | 45.0% | |
| CTATTTCGTTGAGTCCTAGG+AGG | - | chr8.2:68097243-68097262 | MS.gene019686:intron | 45.0% | |
| CTTGATGGAAAGATGGCGAA+TGG | - | chr8.2:68099795-68099814 | MS.gene019686:CDS | 45.0% | |
| GAAATGTATCTTGGCGAGGA+CGG | - | chr8.2:68099831-68099850 | MS.gene019686:CDS | 45.0% | |
| GAACTTTCTGATTCCGTTGC+TGG | - | chr8.2:68098737-68098756 | MS.gene019686:intron | 45.0% | |
| GCTTTCCAGCTTCCAAAACA+GGG | + | chr8.2:68098775-68098794 | None:intergenic | 45.0% | |
| GGCCACAAACAGCTGTTATT+TGG | + | chr8.2:68099289-68099308 | None:intergenic | 45.0% | |
| GTGTTGTATGCTGAACTGGT+TGG | - | chr8.2:68099025-68099044 | MS.gene019686:intron | 45.0% | |
| TGACACATGGAGAACTAGGA+TGG | - | chr8.2:68097856-68097875 | MS.gene019686:intron | 45.0% | |
| TGAGTGAGACAGAGTGAGAT+AGG | + | chr8.2:68099436-68099455 | None:intergenic | 45.0% | |
| TGTCGATAAAGAGTCTGCTG+AGG | - | chr8.2:68096947-68096966 | MS.gene019686:intron | 45.0% | |
| TTTGGGAAATGGGTCTGGTT+GGG | - | chr8.2:68097079-68097098 | MS.gene019686:intron | 45.0% | |
| ! | AGAGCACCACATAAACCAAG+GGG | + | chr8.2:68098926-68098945 | None:intergenic | 45.0% |
| ! | AGATCAGGGAAGTATGCTGA+TGG | - | chr8.2:68098038-68098057 | MS.gene019686:intron | 45.0% |
| ! | CAGAGCGACTGACTCAATAT+TGG | + | chr8.2:68099505-68099524 | None:intergenic | 45.0% |
| ! | GGATATGGATTGTCATGTGG+CGG | - | chr8.2:68097100-68097119 | MS.gene019686:intron | 45.0% |
| ! | TCTGCTCTGCTATTTGGGAT+CGG | - | chr8.2:68099526-68099545 | MS.gene019686:CDS | 45.0% |
| ! | TCTGCTCTGCTCTGCTATTT+GGG | - | chr8.2:68099521-68099540 | MS.gene019686:CDS | 45.0% |
| !! | GTTGATTTGGGAAATGGGTC+TGG | - | chr8.2:68097074-68097093 | MS.gene019686:intron | 45.0% |
| !!! | ATGAACCCTGTTTTGGAAGC+TGG | - | chr8.2:68098767-68098786 | MS.gene019686:intron | 45.0% |
| !!! | CGGGTTCTTCGGCTTTTTTT+AGG | - | chr8.2:68097138-68097157 | MS.gene019686:intron | 45.0% |
| !!! | GCTTTTTTTAGGCCGAAGCT+CGG | - | chr8.2:68097149-68097168 | MS.gene019686:intron | 45.0% |
| ACACTACACCACTACAGCAC+CGG | + | chr8.2:68099194-68099213 | None:intergenic | 50.0% | |
| CATGTGGCGGTTGGATCAAT+TGG | - | chr8.2:68097113-68097132 | MS.gene019686:intron | 50.0% | |
| CTCAGAAACGACACCCTGAA+AGG | - | chr8.2:68097903-68097922 | MS.gene019686:intron | 50.0% | |
| CTCTGCTCTGCTCTGCTATT+TGG | - | chr8.2:68099520-68099539 | MS.gene019686:CDS | 50.0% | |
| GAGCACCACATAAACCAAGG+GGG | + | chr8.2:68098925-68098944 | None:intergenic | 50.0% | |
| GCGCTATTGCACCTATAGCA+CGG | - | chr8.2:68097755-68097774 | MS.gene019686:intron | 50.0% | |
| GCGGTTGGATCAATTGGATC+GGG | - | chr8.2:68097119-68097138 | MS.gene019686:intron | 50.0% | |
| GGATGCTATTCCCGAAGATG+AGG | - | chr8.2:68097289-68097308 | MS.gene019686:intron | 50.0% | |
| GGCGGTTGGATCAATTGGAT+CGG | - | chr8.2:68097118-68097137 | MS.gene019686:intron | 50.0% | |
| GTGGTGTAGTGTAACAGAGC+AGG | - | chr8.2:68099202-68099221 | MS.gene019686:CDS | 50.0% | |
| TCCAATCTCATCAGAAGGCG+TGG | + | chr8.2:68099321-68099340 | None:intergenic | 50.0% | |
| TGCATCCCCCTTGGTTTATG+TGG | - | chr8.2:68098917-68098936 | MS.gene019686:intron | 50.0% | |
| TGTCTAGGAACTCTCCTCCT+AGG | + | chr8.2:68097260-68097279 | None:intergenic | 50.0% | |
| ! | AGTACCTGCAATTTGGGGTG+TGG | + | chr8.2:68097365-68097384 | None:intergenic | 50.0% |
| ! | ATGGATTGTCATGTGGCGGT+TGG | - | chr8.2:68097104-68097123 | MS.gene019686:intron | 50.0% |
| ! | CACAGGTGGTGCTGAATTTG+AGG | - | chr8.2:68097001-68097020 | MS.gene019686:intron | 50.0% |
| ! | CCGAGTGTTGTATGCTGAAC+TGG | - | chr8.2:68099021-68099040 | MS.gene019686:intron | 50.0% |
| CTTTATCGACACGGTCACGG+CGG | + | chr8.2:68096938-68096957 | None:intergenic | 55.0% | |
| GCCACGCCTTCTGATGAGAT+TGG | - | chr8.2:68099317-68099336 | MS.gene019686:CDS | 55.0% | |
| GGTACGTGGTACCGTGCTAT+AGG | + | chr8.2:68097769-68097788 | None:intergenic | 55.0% | |
| GGTCAAAAGCTCTCCGGAAG+TGG | - | chr8.2:68098831-68098850 | MS.gene019686:intron | 55.0% | |
| ! | CAGAAGGCGTGGCACTATAG+CGG | + | chr8.2:68099310-68099329 | None:intergenic | 55.0% |
| !! | TAGGCCGAAGCTCGGTGTTT+CGG | - | chr8.2:68097157-68097176 | MS.gene019686:intron | 55.0% |
| GGAGCCGAAACACCGAGCTT+CGG | + | chr8.2:68097164-68097183 | None:intergenic | 60.0% | |
| !! | GCGCTATACCGGTGCTGTAG+TGG | - | chr8.2:68099183-68099202 | MS.gene019686:intron | 60.0% |
| !! | GCTCGGTGTTTCGGCTCCAT+CGG | - | chr8.2:68097166-68097185 | MS.gene019686:intron | 60.0% |
| TGGGAGCTGTGCATCCCCCT+TGG | - | chr8.2:68098908-68098927 | MS.gene019686:intron | 65.0% | |
| ! | GCGGAAGAGGGTGCAGGGAT+CGG | + | chr8.2:68096900-68096919 | None:intergenic | 65.0% |
| GGAAGCGGTGGGGCGGAAGA+GGG | + | chr8.2:68096912-68096931 | None:intergenic | 70.0% | |
| TCGACACGGTCACGGCGGAG+CGG | + | chr8.2:68096933-68096952 | None:intergenic | 70.0% | |
| ! | GTGGGGCGGAAGAGGGTGCA+GGG | + | chr8.2:68096905-68096924 | None:intergenic | 70.0% |
| ACGGCGGAGCGGAAGCGGTG+GGG | + | chr8.2:68096922-68096941 | None:intergenic | 75.0% | |
| CACGGCGGAGCGGAAGCGGT+GGG | + | chr8.2:68096923-68096942 | None:intergenic | 75.0% | |
| CGGAAGCGGTGGGGCGGAAG+AGG | + | chr8.2:68096913-68096932 | None:intergenic | 75.0% | |
| CGGTCACGGCGGAGCGGAAG+CGG | + | chr8.2:68096927-68096946 | None:intergenic | 75.0% | |
| TCACGGCGGAGCGGAAGCGG+TGG | + | chr8.2:68096924-68096943 | None:intergenic | 75.0% | |
| ! | GGTGGGGCGGAAGAGGGTGC+AGG | + | chr8.2:68096906-68096925 | None:intergenic | 75.0% |
| ! | GCGGAGCGGAAGCGGTGGGG+CGG | + | chr8.2:68096919-68096938 | None:intergenic | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.2 | gene | 68096699 | 68099865 | 68096699 | ID=MS.gene019686 |
| chr8.2 | mRNA | 68096699 | 68099865 | 68096699 | ID=MS.gene019686.t1;Parent=MS.gene019686 |
| chr8.2 | exon | 68099185 | 68099865 | 68099185 | ID=MS.gene019686.t1.exon1;Parent=MS.gene019686.t1 |
| chr8.2 | CDS | 68099185 | 68099865 | 68099185 | ID=cds.MS.gene019686.t1;Parent=MS.gene019686.t1 |
| chr8.2 | exon | 68096699 | 68096799 | 68096699 | ID=MS.gene019686.t1.exon2;Parent=MS.gene019686.t1 |
| chr8.2 | CDS | 68096699 | 68096799 | 68096699 | ID=cds.MS.gene019686.t1;Parent=MS.gene019686.t1 |
| Gene Sequence |
| Protein sequence |
