Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene003867.t1 | XP_003606819.1 | 98.1 | 362 | 7 | 0 | 4 | 365 | 3 | 364 | 9.00E-177 | 629.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene003867.t1 | O04153 | 80.1 | 361 | 68 | 1 | 9 | 365 | 8 | 368 | 1.1e-143 | 511.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene003867.t1 | G7JEV8 | 98.1 | 362 | 7 | 0 | 4 | 365 | 3 | 364 | 6.5e-177 | 629.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene003867 | MS.gene44181 | PPI |
| MS.gene003867 | MS.gene40797 | PPI |
| MS.gene005307 | MS.gene003867 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene003867.t1 | MTR_4g068080 | 98.015 | 403 | 8 | 0 | 4 | 406 | 3 | 405 | 0.0 | 810 |
| MS.gene003867.t1 | MTR_7g080370 | 81.654 | 387 | 70 | 1 | 9 | 395 | 9 | 394 | 0.0 | 626 |
| MS.gene003867.t1 | MTR_7g080370 | 81.654 | 387 | 70 | 1 | 9 | 395 | 9 | 394 | 0.0 | 626 |
| MS.gene003867.t1 | MTR_1g083960 | 64.634 | 328 | 116 | 0 | 25 | 352 | 24 | 351 | 1.39e-155 | 446 |
| MS.gene003867.t1 | MTR_3g098430 | 33.580 | 405 | 205 | 14 | 3 | 351 | 6 | 402 | 5.79e-51 | 180 |
| MS.gene003867.t1 | MTR_3g098430 | 33.580 | 405 | 205 | 14 | 3 | 351 | 6 | 402 | 6.84e-51 | 179 |
| MS.gene003867.t1 | MTR_8g095680 | 32.924 | 407 | 189 | 14 | 9 | 346 | 9 | 400 | 3.31e-50 | 177 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene003867.t1 | AT1G08450 | 77.750 | 400 | 85 | 1 | 9 | 404 | 8 | 407 | 0.0 | 637 |
| MS.gene003867.t1 | AT1G08450 | 72.250 | 400 | 82 | 2 | 9 | 404 | 8 | 382 | 0.0 | 575 |
| MS.gene003867.t1 | AT1G56340 | 60.109 | 366 | 143 | 1 | 1 | 366 | 1 | 363 | 4.24e-160 | 457 |
| MS.gene003867.t1 | AT1G56340 | 60.109 | 366 | 143 | 1 | 1 | 366 | 1 | 363 | 1.27e-159 | 456 |
| MS.gene003867.t1 | AT1G09210 | 59.780 | 363 | 146 | 0 | 4 | 366 | 1 | 363 | 7.65e-158 | 452 |
| MS.gene003867.t1 | AT1G08450 | 60.599 | 401 | 98 | 4 | 9 | 404 | 8 | 353 | 3.04e-155 | 443 |
| MS.gene003867.t1 | AT5G61790 | 33.417 | 398 | 200 | 13 | 7 | 347 | 5 | 394 | 1.51e-61 | 207 |
| MS.gene003867.t1 | AT5G07340 | 34.762 | 420 | 203 | 17 | 19 | 383 | 29 | 432 | 1.70e-49 | 176 |
| MS.gene003867.t1 | AT5G07340 | 34.625 | 413 | 199 | 17 | 26 | 383 | 28 | 424 | 1.70e-48 | 173 |
Find 116 sgRNAs with CRISPR-Local
Find 294 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCAATGCCAACATACTTTAT+TGG | 0.145055 | 4.2:-38449988 | None:intergenic |
| CTTCCACTTTCCCTTGTAAT+TGG | 0.158246 | 4.2:-38449617 | None:intergenic |
| GTATGCTGGATTAGGAATTT+TGG | 0.215109 | 4.2:-38449478 | None:intergenic |
| CACCAGGGTTCTGTTCTTAT+TGG | 0.259124 | 4.2:-38447200 | None:intergenic |
| GGTTACATCAAACTTCTTTC+CGG | 0.268805 | 4.2:+38447268 | MS.gene003867:CDS |
| TTCCACTTTCCCTTGTAATT+GGG | 0.269109 | 4.2:-38449616 | None:intergenic |
| CTCTGGTATCTTTGCAGATA+TGG | 0.277207 | 4.2:-38447173 | None:intergenic |
| AAGAATATATGGTTAATAAT+AGG | 0.283521 | 4.2:+38450228 | MS.gene003867:CDS |
| AGAGAGAGGGGCAGTAGATA+TGG | 0.294547 | 4.2:+38450541 | MS.gene003867:CDS |
| TTGGCGGTGATACTCCTTAT+AGG | 0.301600 | 4.2:+38447311 | MS.gene003867:CDS |
| CACTCCAGATCCTTTCTAAT+AGG | 0.315359 | 4.2:-38448389 | None:intergenic |
| GCAAGTTGTGGAAGAATATA+TGG | 0.315690 | 4.2:+38450217 | MS.gene003867:CDS |
| CAAGGATGTCAAAGCGAAAA+AGG | 0.316348 | 4.2:+38448547 | MS.gene003867:CDS |
| TTAAGTATACTGCTGGAAAA+TGG | 0.316759 | 4.2:+38446655 | MS.gene003867:CDS |
| TCCCGATCCGAAAGCCAAAA+AGG | 0.324030 | 4.2:+38449288 | MS.gene003867:CDS |
| ACCTCTGGTTTGGCATCATC+AGG | 0.324416 | 4.2:-38448838 | None:intergenic |
| GCTTAATGCAGTTTGATGTT+TGG | 0.329009 | 4.2:+38448299 | MS.gene003867:intron |
| AAGAAATCAACGAACCTATA+AGG | 0.347952 | 4.2:-38447325 | None:intergenic |
| GATAATCGAGAAAGAGATTC+TGG | 0.359365 | 4.2:+38448482 | MS.gene003867:CDS |
| AGAATATATGGTTAATAATA+GGG | 0.377299 | 4.2:+38450229 | MS.gene003867:CDS |
| TATGTCAATCAGAAGAAGTT+TGG | 0.379337 | 4.2:+38447292 | MS.gene003867:CDS |
| TCTATTGCAGCCAGCAGATT+GGG | 0.394070 | 4.2:+38448792 | MS.gene003867:intron |
| TTTGTTTCCTGCAGAATTTG+AGG | 0.400410 | 4.2:+38449939 | MS.gene003867:intron |
| GGTCCTCTGTATGCTGGATT+AGG | 0.400688 | 4.2:-38449486 | None:intergenic |
| TTCCATGGTCCTCTGTATGC+TGG | 0.401308 | 4.2:-38449492 | None:intergenic |
| GCGAAAAGAGGAGGAGAGAG+AGG | 0.405303 | 4.2:+38450527 | MS.gene003867:CDS |
| AATGAAAAGTGATTATTAGA+AGG | 0.405531 | 4.2:-38446358 | None:intergenic |
| CTCTATTGCAGCCAGCAGAT+TGG | 0.417061 | 4.2:+38448791 | MS.gene003867:intron |
| CTTCTTCTGATTGACATAAC+CGG | 0.420142 | 4.2:-38447287 | None:intergenic |
| ATTATCAACAAGGACACTAT+AGG | 0.422758 | 4.2:-38448465 | None:intergenic |
| CTGGTAGCATGTACACTGAT+TGG | 0.426354 | 4.2:+38448501 | MS.gene003867:CDS |
| ATGATGAAGATGATGGACTA+TGG | 0.427549 | 4.2:+38449448 | MS.gene003867:CDS |
| TGCAGATATGGCAAAATGCT+TGG | 0.431842 | 4.2:-38447161 | None:intergenic |
| TCCACTTTCCCTTGTAATTG+GGG | 0.432745 | 4.2:-38449615 | None:intergenic |
| GTATTCTATTAAATTTGAAC+AGG | 0.436462 | 4.2:+38447228 | MS.gene003867:CDS |
| CTGTTCTTATTGGTCAACTC+TGG | 0.442357 | 4.2:-38447190 | None:intergenic |
| TTATCCTATTAGAAAGGATC+TGG | 0.449919 | 4.2:+38448385 | MS.gene003867:CDS |
| TGTTTGACTAGCCTGCTGAC+TGG | 0.450718 | 4.2:+38449424 | MS.gene003867:intron |
| TGCAGAATTTGAGGATGATC+CGG | 0.461795 | 4.2:+38449948 | MS.gene003867:intron |
| TGGACTACAATCCAGAGAAA+AGG | 0.466192 | 4.2:-38450591 | None:intergenic |
| TTCGGATCGGGAATTTCCGC+TGG | 0.467739 | 4.2:-38449277 | None:intergenic |
| GACAACAAGTACCTCTGGTT+TGG | 0.473508 | 4.2:-38448848 | None:intergenic |
| CCATGTTATATTGTCATACC+AGG | 0.473885 | 4.2:+38448355 | MS.gene003867:CDS |
| AATCAAGAACCCCAATTACA+AGG | 0.474081 | 4.2:+38449606 | MS.gene003867:CDS |
| CGAAAAGAGGAGGAGAGAGA+GGG | 0.477617 | 4.2:+38450528 | MS.gene003867:CDS |
| GTTTGACTAGCCTGCTGACT+GGG | 0.479098 | 4.2:+38449425 | MS.gene003867:intron |
| TGAAGAACCTTTCGTTTCCA+TGG | 0.479653 | 4.2:-38449507 | None:intergenic |
| AGGAAGGTACCTTTGTCATC+AGG | 0.480334 | 4.2:-38446687 | None:intergenic |
| CAAGAGAAGAGGGCGAAAAG+AGG | 0.485876 | 4.2:+38450515 | MS.gene003867:CDS |
| TTTGAATTTCAGGTAAAGGC+TGG | 0.487948 | 4.2:+38450146 | MS.gene003867:intron |
| AAGATGGGTGGAAGAGTCGT+TGG | 0.494522 | 4.2:+38446589 | MS.gene003867:intron |
| GGTTTCAGCACATAAAGATC+CGG | 0.498989 | 4.2:-38449967 | None:intergenic |
| TGGTAGCATGTACACTGATT+GGG | 0.501433 | 4.2:+38448502 | MS.gene003867:CDS |
| GCTCGAAGGGCAAGAGAAGA+GGG | 0.503612 | 4.2:+38450505 | MS.gene003867:CDS |
| ATGCAGTTTGATGTTTGGAC+CGG | 0.506719 | 4.2:+38448304 | MS.gene003867:intron |
| GCAGTAGATATGGAGATAAG+AGG | 0.516281 | 4.2:+38450551 | MS.gene003867:CDS |
| GTTTGTGTACCACATAGATC+CGG | 0.516433 | 4.2:-38448323 | None:intergenic |
| ACAACTTGCTTTGCATACTG+TGG | 0.516512 | 4.2:-38450203 | None:intergenic |
| TCTCTATCATCCCAATCTGC+TGG | 0.517078 | 4.2:-38448802 | None:intergenic |
| GAAAAGAGGAGGAGAGAGAG+GGG | 0.519240 | 4.2:+38450529 | MS.gene003867:CDS |
| CCTTTGTCATCAGGATCAGC+AGG | 0.522682 | 4.2:-38446678 | None:intergenic |
| CAGGATATTGAGTGTGGTGG+TGG | 0.525477 | 4.2:+38447247 | MS.gene003867:CDS |
| GGCTCGAAGGGCAAGAGAAG+AGG | 0.530539 | 4.2:+38450504 | MS.gene003867:CDS |
| AGATGGGTGGAAGAGTCGTT+GGG | 0.533367 | 4.2:+38446590 | MS.gene003867:intron |
| CTCTTTCTCGATTATCAACA+AGG | 0.534421 | 4.2:-38448475 | None:intergenic |
| GGTACCTTTAAGTATACTGC+TGG | 0.536384 | 4.2:+38446648 | MS.gene003867:CDS |
| GACTGGGATGATGAAGATGA+TGG | 0.536970 | 4.2:+38449441 | MS.gene003867:CDS |
| TAATAGGATAATTCTGCCCC+TGG | 0.538118 | 4.2:-38448373 | None:intergenic |
| ACCCCAATTACAAGGGAAAG+TGG | 0.538966 | 4.2:+38449614 | MS.gene003867:CDS |
| TTCGAAGAAGACTTCAGCAA+AGG | 0.543435 | 4.2:-38446384 | None:intergenic |
| CCTTCCTCCAAGGAAAATCA+AGG | 0.544194 | 4.2:+38448529 | MS.gene003867:CDS |
| GTCAATCAGAAGAAGTTTGG+CGG | 0.550880 | 4.2:+38447295 | MS.gene003867:CDS |
| GCAGAATTATCCTATTAGAA+AGG | 0.550971 | 4.2:+38448379 | MS.gene003867:CDS |
| AGGGAAAGTGGAAGACTCCA+TGG | 0.551615 | 4.2:+38449626 | MS.gene003867:CDS |
| AGGACACTATAGGAGGCATC+AGG | 0.553777 | 4.2:-38448455 | None:intergenic |
| TAATAGAATACTGAAGCACC+AGG | 0.555033 | 4.2:-38447216 | None:intergenic |
| TCTTCATCATCCCAGTCAGC+AGG | 0.556291 | 4.2:-38449435 | None:intergenic |
| TGTTGGCATTGAAGTGTGGC+AGG | 0.558687 | 4.2:+38449999 | MS.gene003867:CDS |
| GAGATAAGAGGCGCCGTAGG+AGG | 0.561496 | 4.2:+38450563 | MS.gene003867:CDS |
| ATTTCTATACATTCATTCTG+AGG | 0.562782 | 4.2:+38448432 | MS.gene003867:CDS |
| AAAAGGAGTGAAGGAAAAGC+AGG | 0.572283 | 4.2:+38446627 | MS.gene003867:CDS |
| ATGGAGATAAGAGGCGCCGT+AGG | 0.572887 | 4.2:+38450560 | MS.gene003867:CDS |
| CCTCTGGTTTGGCATCATCA+GGG | 0.573084 | 4.2:-38448837 | None:intergenic |
| TCTGATTGGAAAAGGAGTGA+AGG | 0.576122 | 4.2:+38446618 | MS.gene003867:CDS |
| CAACTTGCTTTGCATACTGT+GGG | 0.578363 | 4.2:-38450202 | None:intergenic |
| AAGAAGGGCTCGGGAAGAAG+AGG | 0.584687 | 4.2:+38450382 | MS.gene003867:CDS |
| TAATTATGTAGGAGGCTCGA+AGG | 0.586649 | 4.2:+38450491 | MS.gene003867:intron |
| GTACCTGGGTTATCAATCCA+TGG | 0.586860 | 4.2:-38449643 | None:intergenic |
| GAGAAGAGGGCGAAAAGAGG+AGG | 0.590636 | 4.2:+38450518 | MS.gene003867:CDS |
| ATCAAGAACCCCAATTACAA+GGG | 0.597758 | 4.2:+38449607 | MS.gene003867:CDS |
| AGAAAAGGCTTACCCTCCTA+CGG | 0.611772 | 4.2:-38450576 | None:intergenic |
| CTGAAACCAATAAAGTATGT+TGG | 0.613261 | 4.2:+38449982 | MS.gene003867:CDS |
| AGATAAGAGGCGCCGTAGGA+GGG | 0.614360 | 4.2:+38450564 | MS.gene003867:CDS |
| CCTGGTATGACAATATAACA+TGG | 0.616973 | 4.2:-38448355 | None:intergenic |
| ATTGGGACATCCTTCCTCCA+AGG | 0.617026 | 4.2:+38448519 | MS.gene003867:CDS |
| AATTATGTAGGAGGCTCGAA+GGG | 0.625683 | 4.2:+38450492 | MS.gene003867:intron |
| TTCTTCGAAGAAACATTCCA+AGG | 0.625841 | 4.2:+38446398 | MS.gene003867:CDS |
| ATCAACAAGGACACTATAGG+AGG | 0.639534 | 4.2:-38448462 | None:intergenic |
| ATGTTTGGACCGGATCTATG+TGG | 0.646001 | 4.2:+38448314 | MS.gene003867:CDS |
| TTTGTGTAACAAAAGATGGG+TGG | 0.648997 | 4.2:+38446577 | MS.gene003867:intron |
| ATATATGGTTAATAATAGGG+AGG | 0.656632 | 4.2:+38450232 | MS.gene003867:CDS |
| CATGTTATATTGTCATACCA+GGG | 0.660252 | 4.2:+38448356 | MS.gene003867:CDS |
| TTTGAACAGGATATTGAGTG+TGG | 0.661470 | 4.2:+38447241 | MS.gene003867:CDS |
| ACAGTATGCAAAGCAAGTTG+TGG | 0.662036 | 4.2:+38450205 | MS.gene003867:CDS |
| CAGAGGACCATGGAAACGAA+AGG | 0.663800 | 4.2:+38449500 | MS.gene003867:CDS |
| GGGATATGATTCAATTCCAG+CGG | 0.666694 | 4.2:+38449261 | MS.gene003867:intron |
| ATGTTATATTGTCATACCAG+GGG | 0.671492 | 4.2:+38448357 | MS.gene003867:CDS |
| CCCTGATGATGCCAAACCAG+AGG | 0.673897 | 4.2:+38448837 | MS.gene003867:CDS |
| ATCCAGCATACAGAGGACCA+TGG | 0.675114 | 4.2:+38449490 | MS.gene003867:CDS |
| ATTCCTAATCCAGCATACAG+AGG | 0.680448 | 4.2:+38449483 | MS.gene003867:CDS |
| GACCAATAAGAACAGAACCC+TGG | 0.691427 | 4.2:+38447198 | MS.gene003867:CDS |
| AGTATGTTGGCATTGAAGTG+TGG | 0.694735 | 4.2:+38449995 | MS.gene003867:CDS |
| GAACAGGATATTGAGTGTGG+TGG | 0.695916 | 4.2:+38447244 | MS.gene003867:CDS |
| CCTGCTGATCCTGATGACAA+AGG | 0.699272 | 4.2:+38446678 | MS.gene003867:CDS |
| AATAGAATACTGAAGCACCA+GGG | 0.711638 | 4.2:-38447215 | None:intergenic |
| ACTCCATGGATTGATAACCC+AGG | 0.732011 | 4.2:+38449640 | MS.gene003867:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTCAAATTATCAAAATATAA+CGG | - | chr4.2:38450132-38450151 | None:intergenic | 10.0% |
| !!! | TACTATAATATACTATTTTT+AGG | - | chr4.2:38449136-38449155 | None:intergenic | 10.0% |
| !!! | TTTTATATATATTTCCTTAA+AGG | - | chr4.2:38449005-38449024 | None:intergenic | 10.0% |
| !! | AAAATATTAAACACGAAAAA+AGG | - | chr4.2:38449405-38449424 | None:intergenic | 15.0% |
| !! | AAGAATATATGGTTAATAAT+AGG | + | chr4.2:38450228-38450247 | MS.gene003867:CDS | 15.0% |
| !! | AGAATATATGGTTAATAATA+GGG | + | chr4.2:38450229-38450248 | MS.gene003867:CDS | 15.0% |
| !! | ATAAAAATTTGTAATGTTTC+AGG | - | chr4.2:38449904-38449923 | None:intergenic | 15.0% |
| !! | ATAGTATATTATAGTAAGAA+TGG | + | chr4.2:38449140-38449159 | MS.gene003867:intron | 15.0% |
| !! | ATTTGATGTTATAATTATGT+AGG | + | chr4.2:38450480-38450499 | MS.gene003867:intron | 15.0% |
| !! | TAAAAATTTGTAATGTTTCA+GGG | - | chr4.2:38449903-38449922 | None:intergenic | 15.0% |
| !! | TACATAATTATAACATCAAA+TGG | - | chr4.2:38450481-38450500 | None:intergenic | 15.0% |
| !! | TATATATAAAATTAGAAACC+TGG | + | chr4.2:38449014-38449033 | MS.gene003867:intron | 15.0% |
| !!! | ATAATCATATTTGTTTTTGA+AGG | + | chr4.2:38450451-38450470 | MS.gene003867:intron | 15.0% |
| !!! | ATTTTGATAATTTGAATTTC+AGG | + | chr4.2:38450136-38450155 | MS.gene003867:intron | 15.0% |
| !!! | TAAATTTTCCTATTAAAAAG+AGG | - | chr4.2:38447600-38447619 | None:intergenic | 15.0% |
| !!! | TAATCATATTTGTTTTTGAA+GGG | + | chr4.2:38450452-38450471 | MS.gene003867:intron | 15.0% |
| !!! | TTATTCTTTTTAAGTTTTGT+CGG | + | chr4.2:38449056-38449075 | MS.gene003867:intron | 15.0% |
| !! | AAAAATTTGTAATGTTTCAG+GGG | - | chr4.2:38449902-38449921 | None:intergenic | 20.0% |
| !! | AAACAACTCAAACATTATAT+AGG | + | chr4.2:38448702-38448721 | MS.gene003867:intron | 20.0% |
| !! | AAATTTACAATGACATTGTA+TGG | - | chr4.2:38449193-38449212 | None:intergenic | 20.0% |
| !! | AATGAAAAGTGATTATTAGA+AGG | - | chr4.2:38446361-38446380 | None:intergenic | 20.0% |
| !! | AATTTACAATGACATTGTAT+GGG | - | chr4.2:38449192-38449211 | None:intergenic | 20.0% |
| !! | AGTTGTTACAAACTAAATAA+CGG | - | chr4.2:38450288-38450307 | None:intergenic | 20.0% |
| !! | ATTGAATGTAATCAATGTAT+CGG | + | chr4.2:38448128-38448147 | MS.gene003867:intron | 20.0% |
| !! | CAAAATTTATGTATAGCATA+TGG | + | chr4.2:38449815-38449834 | MS.gene003867:intron | 20.0% |
| !! | GTATTCTATTAAATTTGAAC+AGG | + | chr4.2:38447228-38447247 | MS.gene003867:CDS | 20.0% |
| !! | TATATATATTTCCTTAAAGG+TGG | - | chr4.2:38449002-38449021 | None:intergenic | 20.0% |
| !!! | AATCATATTTGTTTTTGAAG+GGG | + | chr4.2:38450453-38450472 | MS.gene003867:intron | 20.0% |
| !!! | ATAATTTGAATTTCAGGTAA+AGG | + | chr4.2:38450142-38450161 | MS.gene003867:intron | 20.0% |
| !!! | ATGTCATTGTAAATTTTAGT+TGG | + | chr4.2:38449197-38449216 | MS.gene003867:intron | 20.0% |
| !!! | CATATGCTATACATAAATTT+TGG | - | chr4.2:38449817-38449836 | None:intergenic | 20.0% |
| !!! | TATTCTTTTTAAGTTTTGTC+GGG | + | chr4.2:38449057-38449076 | MS.gene003867:intron | 20.0% |
| !!! | TCTAATTTTGATCAAACAAA+AGG | + | chr4.2:38447551-38447570 | MS.gene003867:intron | 20.0% |
| !!! | TGTGTATTTTAATTGTTTTG+TGG | + | chr4.2:38447352-38447371 | MS.gene003867:intron | 20.0% |
| !!! | TTTTTTCATATAAGCTATTC+CGG | + | chr4.2:38446890-38446909 | MS.gene003867:intron | 20.0% |
| ! | AAAAAGACAACATAGTTGAT+GGG | - | chr4.2:38446514-38446533 | None:intergenic | 25.0% |
| ! | AAAGACTGTAGAATAACTAT+CGG | - | chr4.2:38447880-38447899 | None:intergenic | 25.0% |
| ! | AACCAATGAGAGAAATTTAA+AGG | - | chr4.2:38447854-38447873 | None:intergenic | 25.0% |
| ! | ACAAGTACAAGAAAACATAA+AGG | - | chr4.2:38446473-38446492 | None:intergenic | 25.0% |
| ! | ACTAAATAAATACGCGTATT+TGG | + | chr4.2:38449355-38449374 | MS.gene003867:intron | 25.0% |
| ! | ACTTCTAAATTAGTGTTAGT+TGG | + | chr4.2:38448574-38448593 | MS.gene003867:intron | 25.0% |
| ! | AGCATTGTAACATTCAAATA+AGG | - | chr4.2:38448622-38448641 | None:intergenic | 25.0% |
| ! | ATAACACTAAAGGTCATATT+TGG | - | chr4.2:38447082-38447101 | None:intergenic | 25.0% |
| ! | ATATAATGCATTTGAGTAAG+AGG | - | chr4.2:38446715-38446734 | None:intergenic | 25.0% |
| ! | ATATATGGTTAATAATAGGG+AGG | + | chr4.2:38450232-38450251 | MS.gene003867:CDS | 25.0% |
| ! | ATCAAACTCTATAACACTAA+AGG | - | chr4.2:38447092-38447111 | None:intergenic | 25.0% |
| ! | ATCGTGTTAACTTTCTTTAT+TGG | + | chr4.2:38447929-38447948 | MS.gene003867:intron | 25.0% |
| ! | ATTTACAATGACATTGTATG+GGG | - | chr4.2:38449191-38449210 | None:intergenic | 25.0% |
| ! | ATTTCTATACATTCATTCTG+AGG | + | chr4.2:38448432-38448451 | MS.gene003867:CDS | 25.0% |
| ! | CACAAGTTATTTAATGTTGA+AGG | + | chr4.2:38448207-38448226 | MS.gene003867:intron | 25.0% |
| ! | GAGAGAAATTTAAAGGTAAA+TGG | - | chr4.2:38447847-38447866 | None:intergenic | 25.0% |
| ! | GCTTAAAAAATAATGTACCT+GGG | - | chr4.2:38449660-38449679 | None:intergenic | 25.0% |
| ! | TAAAAAGACAACATAGTTGA+TGG | - | chr4.2:38446515-38446534 | None:intergenic | 25.0% |
| ! | TAAATGGTGTAAAACCTTAA+TGG | + | chr4.2:38448976-38448995 | MS.gene003867:intron | 25.0% |
| ! | TACCTTTAAATTTCTCTCAT+TGG | + | chr4.2:38447849-38447868 | MS.gene003867:intron | 25.0% |
| ! | TATAATGCATTTGAGTAAGA+GGG | - | chr4.2:38446714-38446733 | None:intergenic | 25.0% |
| ! | TCCTATTAAAAAGAGGAAAT+AGG | - | chr4.2:38447593-38447612 | None:intergenic | 25.0% |
| ! | TGATGTTATAATTATGTAGG+AGG | + | chr4.2:38450483-38450502 | MS.gene003867:intron | 25.0% |
| ! | TGCTTAAAAAATAATGTACC+TGG | - | chr4.2:38449661-38449680 | None:intergenic | 25.0% |
| ! | TGTTATTAGTTATTGAAGTC+TGG | + | chr4.2:38448657-38448676 | MS.gene003867:intron | 25.0% |
| ! | TTCAGTTAGTTGATTAACAT+TGG | + | chr4.2:38446553-38446572 | MS.gene003867:intron | 25.0% |
| ! | TTCTCAAATTATTACAGTGT+CGG | - | chr4.2:38448099-38448118 | None:intergenic | 25.0% |
| ! | TTTCTCTACCTTTAACTATT+GGG | + | chr4.2:38447897-38447916 | MS.gene003867:intron | 25.0% |
| !! | AACAAACAAACAAACCTTTT+TGG | - | chr4.2:38449305-38449324 | None:intergenic | 25.0% |
| !! | ACCTATTTCCTCTTTTTAAT+AGG | + | chr4.2:38447589-38447608 | MS.gene003867:intron | 25.0% |
| !! | GTTTGAGATTTAGAAATTCT+TGG | + | chr4.2:38447374-38447393 | MS.gene003867:intron | 25.0% |
| !! | TGTGATATTGAACTGTTTTA+AGG | + | chr4.2:38449718-38449737 | MS.gene003867:intron | 25.0% |
| !! | TTTTTCATATAAGCTATTCC+GGG | + | chr4.2:38446891-38446910 | MS.gene003867:intron | 25.0% |
| !!! | AGGTACATTATTTTTTAAGC+AGG | + | chr4.2:38449660-38449679 | MS.gene003867:intron | 25.0% |
| !!! | ATTCTTTTTAAGTTTTGTCG+GGG | + | chr4.2:38449058-38449077 | MS.gene003867:intron | 25.0% |
| AAAGGATCTTGAAAAGTCAA+AGG | - | chr4.2:38446455-38446474 | None:intergenic | 30.0% | |
| AAGAAATCAACGAACCTATA+AGG | - | chr4.2:38447328-38447347 | None:intergenic | 30.0% | |
| AAGGAACTTATCTTCTAACA+GGG | + | chr4.2:38447721-38447740 | MS.gene003867:intron | 30.0% | |
| ATCAGTGTAATGTATTGAGT+AGG | + | chr4.2:38448259-38448278 | MS.gene003867:intron | 30.0% | |
| ATGTATAGCATATGGACATA+TGG | + | chr4.2:38449823-38449842 | MS.gene003867:intron | 30.0% | |
| ATGTGCATGTAAAACCTTAA+TGG | + | chr4.2:38448895-38448914 | MS.gene003867:intron | 30.0% | |
| ATGTTATATTGTCATACCAG+GGG | + | chr4.2:38448357-38448376 | MS.gene003867:CDS | 30.0% | |
| ATTACACTGATAGAACAACT+AGG | - | chr4.2:38448250-38448269 | None:intergenic | 30.0% | |
| ATTATCAACAAGGACACTAT+AGG | - | chr4.2:38448468-38448487 | None:intergenic | 30.0% | |
| CATGTTATATTGTCATACCA+GGG | + | chr4.2:38448356-38448375 | MS.gene003867:CDS | 30.0% | |
| CTAATTGTCTTGATATTGCA+GGG | + | chr4.2:38449241-38449260 | MS.gene003867:intron | 30.0% | |
| CTGAAACCAATAAAGTATGT+TGG | + | chr4.2:38449982-38450001 | MS.gene003867:CDS | 30.0% | |
| CTTTAGACTTGATATATGAC+AGG | - | chr4.2:38447819-38447838 | None:intergenic | 30.0% | |
| CTTTCTCTACCTTTAACTAT+TGG | + | chr4.2:38447896-38447915 | MS.gene003867:intron | 30.0% | |
| GAAGATTACCCAATAGTTAA+AGG | - | chr4.2:38447908-38447927 | None:intergenic | 30.0% | |
| GATTTAGAAATTCTTGGACT+TGG | + | chr4.2:38447380-38447399 | MS.gene003867:intron | 30.0% | |
| GCAAACAATAAAAAAGGCAA+AGG | - | chr4.2:38448875-38448894 | None:intergenic | 30.0% | |
| GCACATGCAAACAATAAAAA+AGG | - | chr4.2:38448881-38448900 | None:intergenic | 30.0% | |
| GCAGAATTATCCTATTAGAA+AGG | + | chr4.2:38448379-38448398 | MS.gene003867:CDS | 30.0% | |
| GCTGCAATAGAGAAAAAAAA+AGG | - | chr4.2:38448783-38448802 | None:intergenic | 30.0% | |
| GCTTATACATAAGCACTTAT+AGG | - | chr4.2:38446834-38446853 | None:intergenic | 30.0% | |
| GGACAGTTTAATGATATGTT+TGG | - | chr4.2:38449796-38449815 | None:intergenic | 30.0% | |
| TATGTCAATCAGAAGAAGTT+TGG | + | chr4.2:38447292-38447311 | MS.gene003867:CDS | 30.0% | |
| TCAATGCCAACATACTTTAT+TGG | - | chr4.2:38449991-38450010 | None:intergenic | 30.0% | |
| TCAGTGTAATGTATTGAGTA+GGG | + | chr4.2:38448260-38448279 | MS.gene003867:intron | 30.0% | |
| TCATATGAGCGATAGATAAA+TGG | + | chr4.2:38448960-38448979 | MS.gene003867:intron | 30.0% | |
| TCTAATTGTCTTGATATTGC+AGG | + | chr4.2:38449240-38449259 | MS.gene003867:intron | 30.0% | |
| TTAAGTATACTGCTGGAAAA+TGG | + | chr4.2:38446655-38446674 | MS.gene003867:CDS | 30.0% | |
| TTATCCTATTAGAAAGGATC+TGG | + | chr4.2:38448385-38448404 | MS.gene003867:CDS | 30.0% | |
| ! | CTCATTTTGTGTAAAATCTC+AGG | + | chr4.2:38450325-38450344 | MS.gene003867:intron | 30.0% |
| ! | TCTTTATTGGTGCTTTAACA+TGG | + | chr4.2:38447942-38447961 | MS.gene003867:intron | 30.0% |
| ! | TTAAGCAGTTTTTCCAAACA+TGG | - | chr4.2:38446799-38446818 | None:intergenic | 30.0% |
| ! | TTTTCATATAAGCTATTCCG+GGG | + | chr4.2:38446892-38446911 | MS.gene003867:intron | 30.0% |
| ! | TTTTCCAGCAGTATACTTAA+AGG | - | chr4.2:38446655-38446674 | None:intergenic | 30.0% |
| !! | AAAAGAAGCTTTTGAAGAAG+CGG | + | chr4.2:38450352-38450371 | MS.gene003867:CDS | 30.0% |
| !! | GGTTTTGTGTAACAAAAGAT+GGG | + | chr4.2:38446574-38446593 | MS.gene003867:intron | 30.0% |
| !!! | AAACAAACCTTTTTGGCTTT+CGG | - | chr4.2:38449298-38449317 | None:intergenic | 30.0% |
| !!! | AGTTGATGGGTTTTTTTTGT+TGG | - | chr4.2:38446501-38446520 | None:intergenic | 30.0% |
| !!! | TGGTTTTGTGTAACAAAAGA+TGG | + | chr4.2:38446573-38446592 | MS.gene003867:intron | 30.0% |
| AAGAAGCGGAAAAAGAAAGA+AGG | + | chr4.2:38450366-38450385 | MS.gene003867:CDS | 35.0% | |
| AATCAAGAACCCCAATTACA+AGG | + | chr4.2:38449606-38449625 | MS.gene003867:CDS | 35.0% | |
| ACTTATTTCCATAAGTTCCC+CGG | - | chr4.2:38446912-38446931 | None:intergenic | 35.0% | |
| AGAAGCGGAAAAAGAAAGAA+GGG | + | chr4.2:38450367-38450386 | MS.gene003867:CDS | 35.0% | |
| ATCAAGAACCCCAATTACAA+GGG | + | chr4.2:38449607-38449626 | MS.gene003867:CDS | 35.0% | |
| ATGGTTAATAATAGGGAGGT+AGG | + | chr4.2:38450236-38450255 | MS.gene003867:intron | 35.0% | |
| CAAGGAACTTATCTTCTAAC+AGG | + | chr4.2:38447720-38447739 | MS.gene003867:intron | 35.0% | |
| CATGAAAGTTATCCATACCA+CGG | - | chr4.2:38448939-38448958 | None:intergenic | 35.0% | |
| CCATGTTATATTGTCATACC+AGG | + | chr4.2:38448355-38448374 | MS.gene003867:CDS | 35.0% | |
| CCTGGTATGACAATATAACA+TGG | - | chr4.2:38448358-38448377 | None:intergenic | 35.0% | |
| CTAAATTAGTGTTAGTTGGC+TGG | + | chr4.2:38448578-38448597 | MS.gene003867:intron | 35.0% | |
| CTCTTTCTCGATTATCAACA+AGG | - | chr4.2:38448478-38448497 | None:intergenic | 35.0% | |
| CTTCTTCTGATTGACATAAC+CGG | - | chr4.2:38447290-38447309 | None:intergenic | 35.0% | |
| GAATTGACATTCATATCCCT+TGG | + | chr4.2:38449550-38449569 | MS.gene003867:intron | 35.0% | |
| GATAATCGAGAAAGAGATTC+TGG | + | chr4.2:38448482-38448501 | MS.gene003867:CDS | 35.0% | |
| GATCTTGAAAAGTCAAAGGT+AGG | - | chr4.2:38446451-38446470 | None:intergenic | 35.0% | |
| GCAAGTTGTGGAAGAATATA+TGG | + | chr4.2:38450217-38450236 | MS.gene003867:CDS | 35.0% | |
| GCTTAATGCAGTTTGATGTT+TGG | + | chr4.2:38448299-38448318 | MS.gene003867:intron | 35.0% | |
| GGTGGGGAAAAAAATAATAG+AGG | - | chr4.2:38447488-38447507 | None:intergenic | 35.0% | |
| GGTTACATCAAACTTCTTTC+CGG | + | chr4.2:38447268-38447287 | MS.gene003867:CDS | 35.0% | |
| TAATGAAAGTGACTCTAACC+AGG | - | chr4.2:38449035-38449054 | None:intergenic | 35.0% | |
| TACCACGGTAAAATTCTTAC+AGG | - | chr4.2:38448924-38448943 | None:intergenic | 35.0% | |
| TATCCCTTGGTTTCTAATTG+TGG | + | chr4.2:38449563-38449582 | MS.gene003867:intron | 35.0% | |
| TCACATGACAAGATCATTGA+GGG | - | chr4.2:38447515-38447534 | None:intergenic | 35.0% | |
| TTCCACTTTCCCTTGTAATT+GGG | - | chr4.2:38449619-38449638 | None:intergenic | 35.0% | |
| TTCTTCGAAGAAACATTCCA+AGG | + | chr4.2:38446398-38446417 | MS.gene003867:CDS | 35.0% | |
| TTGCCACAATTAGAAACCAA+GGG | - | chr4.2:38449569-38449588 | None:intergenic | 35.0% | |
| TTTGAACAGGATATTGAGTG+TGG | + | chr4.2:38447241-38447260 | MS.gene003867:CDS | 35.0% | |
| TTTGCCACAATTAGAAACCA+AGG | - | chr4.2:38449570-38449589 | None:intergenic | 35.0% | |
| TTTGTGTAACAAAAGATGGG+TGG | + | chr4.2:38446577-38446596 | MS.gene003867:intron | 35.0% | |
| TTTGTTTCCTGCAGAATTTG+AGG | + | chr4.2:38449939-38449958 | MS.gene003867:intron | 35.0% | |
| ! | AACAAAAGGCTATTCTGAAG+AGG | + | chr4.2:38447565-38447584 | MS.gene003867:intron | 35.0% |
| ! | AATAGAATACTGAAGCACCA+GGG | - | chr4.2:38447218-38447237 | None:intergenic | 35.0% |
| ! | AGAATAGTGCTGAAGCATTA+AGG | - | chr4.2:38450421-38450440 | None:intergenic | 35.0% |
| ! | ATCTTTAAAAACGAGCAGAG+TGG | - | chr4.2:38449773-38449792 | None:intergenic | 35.0% |
| ! | GTAAGAATTTTACCGTGGTA+TGG | + | chr4.2:38448924-38448943 | MS.gene003867:intron | 35.0% |
| ! | TAATAGAATACTGAAGCACC+AGG | - | chr4.2:38447219-38447238 | None:intergenic | 35.0% |
| ! | TAGTGTTTTACGATTCTTGC+AGG | + | chr4.2:38447118-38447137 | MS.gene003867:intron | 35.0% |
| ! | TATTGAAGTCTGGAACTCAA+AGG | + | chr4.2:38448667-38448686 | MS.gene003867:intron | 35.0% |
| ! | TTGACATCCTTGATTTTCCT+TGG | - | chr4.2:38448539-38448558 | None:intergenic | 35.0% |
| ! | TTTGAATTTCAGGTAAAGGC+TGG | + | chr4.2:38450146-38450165 | MS.gene003867:intron | 35.0% |
| !! | ATGATGAAGATGATGGACTA+TGG | + | chr4.2:38449448-38449467 | MS.gene003867:CDS | 35.0% |
| !! | GTATGCTGGATTAGGAATTT+TGG | - | chr4.2:38449481-38449500 | None:intergenic | 35.0% |
| !! | TCAACTATGAAGCATTGACA+CGG | + | chr4.2:38448044-38448063 | MS.gene003867:intron | 35.0% |
| !! | TTTTAGCTACATGCCATGTT+TGG | + | chr4.2:38446783-38446802 | MS.gene003867:intron | 35.0% |
| !!! | TAAGCACTCGTGAGATTTTT+TGG | - | chr4.2:38447030-38447049 | None:intergenic | 35.0% |
| AAAAGGAGTGAAGGAAAAGC+AGG | + | chr4.2:38446627-38446646 | MS.gene003867:CDS | 40.0% | |
| AACCTTAATGGCCACCTTTA+AGG | + | chr4.2:38448988-38449007 | MS.gene003867:intron | 40.0% | |
| AATTATGTAGGAGGCTCGAA+GGG | + | chr4.2:38450492-38450511 | MS.gene003867:intron | 40.0% | |
| ACAGTATGCAAAGCAAGTTG+TGG | + | chr4.2:38450205-38450224 | MS.gene003867:CDS | 40.0% | |
| ATAGAACAACTAGGACAGTG+AGG | - | chr4.2:38448241-38448260 | None:intergenic | 40.0% | |
| ATCAACAAGGACACTATAGG+AGG | - | chr4.2:38448465-38448484 | None:intergenic | 40.0% | |
| ATGCAGTTTGATGTTTGGAC+CGG | + | chr4.2:38448304-38448323 | MS.gene003867:intron | 40.0% | |
| ATGCATTTGAGTAAGAGGGT+AGG | - | chr4.2:38446710-38446729 | None:intergenic | 40.0% | |
| ATTCCTAATCCAGCATACAG+AGG | + | chr4.2:38449483-38449502 | MS.gene003867:CDS | 40.0% | |
| ATTCTTACAGGTGGCCATTA+AGG | - | chr4.2:38448912-38448931 | None:intergenic | 40.0% | |
| ATTGAGTAGGGTGAACTGAT+TGG | + | chr4.2:38448272-38448291 | MS.gene003867:intron | 40.0% | |
| ATTTCAGCAGTAGCAAAGTG+TGG | - | chr4.2:38448011-38448030 | None:intergenic | 40.0% | |
| ATTTGAGTAAGAGGGTAGGA+AGG | - | chr4.2:38446706-38446725 | None:intergenic | 40.0% | |
| CAAGGATGTCAAAGCGAAAA+AGG | + | chr4.2:38448547-38448566 | MS.gene003867:CDS | 40.0% | |
| CACATGACAAGATCATTGAG+GGG | - | chr4.2:38447514-38447533 | None:intergenic | 40.0% | |
| CACGGTAAAATTCTTACAGG+TGG | - | chr4.2:38448921-38448940 | None:intergenic | 40.0% | |
| CACTCCAGATCCTTTCTAAT+AGG | - | chr4.2:38448392-38448411 | None:intergenic | 40.0% | |
| CTCACATGACAAGATCATTG+AGG | - | chr4.2:38447516-38447535 | None:intergenic | 40.0% | |
| CTCTGGTATCTTTGCAGATA+TGG | - | chr4.2:38447176-38447195 | None:intergenic | 40.0% | |
| CTGTTCTTATTGGTCAACTC+TGG | - | chr4.2:38447193-38447212 | None:intergenic | 40.0% | |
| CTTATCTTCTAACAGGGTCA+AGG | + | chr4.2:38447727-38447746 | MS.gene003867:intron | 40.0% | |
| CTTCCACTTTCCCTTGTAAT+TGG | - | chr4.2:38449620-38449639 | None:intergenic | 40.0% | |
| GAAGATGGTTTCAGTTACCT+TGG | - | chr4.2:38446418-38446437 | None:intergenic | 40.0% | |
| GCAGTAGATATGGAGATAAG+AGG | + | chr4.2:38450551-38450570 | MS.gene003867:CDS | 40.0% | |
| GGGATATGATTCAATTCCAG+CGG | + | chr4.2:38449261-38449280 | MS.gene003867:intron | 40.0% | |
| GGTACCTTTAAGTATACTGC+TGG | + | chr4.2:38446648-38446667 | MS.gene003867:CDS | 40.0% | |
| GGTTTCAGCACATAAAGATC+CGG | - | chr4.2:38449970-38449989 | None:intergenic | 40.0% | |
| GTAGGAACTTAAGAGGAAGA+TGG | - | chr4.2:38446433-38446452 | None:intergenic | 40.0% | |
| GTCAAAGGTAGGAACTTAAG+AGG | - | chr4.2:38446440-38446459 | None:intergenic | 40.0% | |
| GTCAATCAGAAGAAGTTTGG+CGG | + | chr4.2:38447295-38447314 | MS.gene003867:CDS | 40.0% | |
| GTTTGTGTACCACATAGATC+CGG | - | chr4.2:38448326-38448345 | None:intergenic | 40.0% | |
| TAAATACGCGTATTTGGCAC+AGG | + | chr4.2:38449361-38449380 | MS.gene003867:intron | 40.0% | |
| TAATAGGATAATTCTGCCCC+TGG | - | chr4.2:38448376-38448395 | None:intergenic | 40.0% | |
| TAATTATGTAGGAGGCTCGA+AGG | + | chr4.2:38450491-38450510 | MS.gene003867:intron | 40.0% | |
| TCCACTTTCCCTTGTAATTG+GGG | - | chr4.2:38449618-38449637 | None:intergenic | 40.0% | |
| TCGTCATCAATGATGAGCAA+TGG | - | chr4.2:38447425-38447444 | None:intergenic | 40.0% | |
| TCTGATTGGAAAAGGAGTGA+AGG | + | chr4.2:38446618-38446637 | MS.gene003867:CDS | 40.0% | |
| TGAAGAACCTTTCGTTTCCA+TGG | - | chr4.2:38449510-38449529 | None:intergenic | 40.0% | |
| TGCAGAATTTGAGGATGATC+CGG | + | chr4.2:38449948-38449967 | MS.gene003867:intron | 40.0% | |
| TGCAGATATGGCAAAATGCT+TGG | - | chr4.2:38447164-38447183 | None:intergenic | 40.0% | |
| TTCCTTAAAGGTGGCCATTA+AGG | - | chr4.2:38448993-38449012 | None:intergenic | 40.0% | |
| TTCGAAGAAGACTTCAGCAA+AGG | - | chr4.2:38446387-38446406 | None:intergenic | 40.0% | |
| ! | ACAACTTGCTTTGCATACTG+TGG | - | chr4.2:38450206-38450225 | None:intergenic | 40.0% |
| ! | ACATCCTTGATTTTCCTTGG+AGG | - | chr4.2:38448536-38448555 | None:intergenic | 40.0% |
| ! | AGTATGTTGGCATTGAAGTG+TGG | + | chr4.2:38449995-38450014 | MS.gene003867:CDS | 40.0% |
| ! | CAACTTGCTTTGCATACTGT+GGG | - | chr4.2:38450205-38450224 | None:intergenic | 40.0% |
| ! | CACCTGTAAGAATTTTACCG+TGG | + | chr4.2:38448919-38448938 | MS.gene003867:intron | 40.0% |
| ! | GTTTTGTCGGGGATCATAAA+TGG | + | chr4.2:38449069-38449088 | MS.gene003867:intron | 40.0% |
| ! | TGGTAGCATGTACACTGATT+GGG | + | chr4.2:38448502-38448521 | MS.gene003867:CDS | 40.0% |
| !! | GAAGAAGAGGTAATGGATCA+AGG | + | chr4.2:38450395-38450414 | MS.gene003867:intron | 40.0% |
| !! | GCTGGATTAGGAATTTTGGA+AGG | - | chr4.2:38449477-38449496 | None:intergenic | 40.0% |
| !! | GGGTTTTGTCTGATTGGAAA+AGG | + | chr4.2:38446610-38446629 | MS.gene003867:CDS | 40.0% |
| !! | TAATCAATGTATCGGTGTCG+TGG | + | chr4.2:38448136-38448155 | MS.gene003867:intron | 40.0% |
| !!! | AACCTTTTTGGCTTTCGGAT+CGG | - | chr4.2:38449293-38449312 | None:intergenic | 40.0% |
| AAGATCATTGAGGGGAATGG+TGG | - | chr4.2:38447506-38447525 | None:intergenic | 45.0% | |
| AAGCTATTCCGGGGAACTTA+TGG | + | chr4.2:38446901-38446920 | MS.gene003867:intron | 45.0% | |
| AAGGTGACAACAAGTACCTC+TGG | - | chr4.2:38448856-38448875 | None:intergenic | 45.0% | |
| ACCCCAATTACAAGGGAAAG+TGG | + | chr4.2:38449614-38449633 | MS.gene003867:CDS | 45.0% | |
| AGAAAAGGCTTACCCTCCTA+CGG | - | chr4.2:38450579-38450598 | None:intergenic | 45.0% | |
| AGATCATTGAGGGGAATGGT+GGG | - | chr4.2:38447505-38447524 | None:intergenic | 45.0% | |
| ATGTTTGGACCGGATCTATG+TGG | + | chr4.2:38448314-38448333 | MS.gene003867:CDS | 45.0% | |
| CACCAGGGTTCTGTTCTTAT+TGG | - | chr4.2:38447203-38447222 | None:intergenic | 45.0% | |
| CACGTAAGAGTTGAAGATGG+AGG | - | chr4.2:38447666-38447685 | None:intergenic | 45.0% | |
| CCTTCCTCCAAGGAAAATCA+AGG | + | chr4.2:38448529-38448548 | MS.gene003867:CDS | 45.0% | |
| CGGAAAAAGAAAGAAGGGCT+CGG | + | chr4.2:38450372-38450391 | MS.gene003867:CDS | 45.0% | |
| CTGGTAGCATGTACACTGAT+TGG | + | chr4.2:38448501-38448520 | MS.gene003867:CDS | 45.0% | |
| GAACAGGATATTGAGTGTGG+TGG | + | chr4.2:38447244-38447263 | MS.gene003867:CDS | 45.0% | |
| GACAACAAGTACCTCTGGTT+TGG | - | chr4.2:38448851-38448870 | None:intergenic | 45.0% | |
| GACAAGATCATTGAGGGGAA+TGG | - | chr4.2:38447509-38447528 | None:intergenic | 45.0% | |
| GACCAATAAGAACAGAACCC+TGG | + | chr4.2:38447198-38447217 | MS.gene003867:CDS | 45.0% | |
| GACTGGGATGATGAAGATGA+TGG | + | chr4.2:38449441-38449460 | MS.gene003867:CDS | 45.0% | |
| GGAAAAAGAAAGAAGGGCTC+GGG | + | chr4.2:38450373-38450392 | MS.gene003867:CDS | 45.0% | |
| GGACACGTAAGAGTTGAAGA+TGG | - | chr4.2:38447669-38447688 | None:intergenic | 45.0% | |
| GGATCATCCTCAAATTCTGC+AGG | - | chr4.2:38449949-38449968 | None:intergenic | 45.0% | |
| GTACCTGGGTTATCAATCCA+TGG | - | chr4.2:38449646-38449665 | None:intergenic | 45.0% | |
| GTAGTTCAAGTGGTTGAGCT+GGG | - | chr4.2:38447690-38447709 | None:intergenic | 45.0% | |
| TCAGCTTCTTTGAGCTGTGA+TGG | + | chr4.2:38449851-38449870 | MS.gene003867:intron | 45.0% | |
| TCTATTGCAGCCAGCAGATT+GGG | + | chr4.2:38448792-38448811 | MS.gene003867:intron | 45.0% | |
| TCTCTATCATCCCAATCTGC+TGG | - | chr4.2:38448805-38448824 | None:intergenic | 45.0% | |
| TTGGCGGTGATACTCCTTAT+AGG | + | chr4.2:38447311-38447330 | MS.gene003867:CDS | 45.0% | |
| ! | ACTCCATGGATTGATAACCC+AGG | + | chr4.2:38449640-38449659 | MS.gene003867:CDS | 45.0% |
| ! | CAACCACTCCTTTTCCCATT+AGG | + | chr4.2:38447756-38447775 | MS.gene003867:intron | 45.0% |
| ! | CCTTGATTTTCCTTGGAGGA+AGG | - | chr4.2:38448532-38448551 | None:intergenic | 45.0% |
| !! | AGGAAGGTACCTTTGTCATC+AGG | - | chr4.2:38446690-38446709 | None:intergenic | 45.0% |
| !! | GTCGTTGGGTTTTGTCTGAT+TGG | + | chr4.2:38446604-38446623 | MS.gene003867:CDS | 45.0% |
| !!! | ACCTTTTTGGCTTTCGGATC+GGG | - | chr4.2:38449292-38449311 | None:intergenic | 45.0% |
| AAGATGGGTGGAAGAGTCGT+TGG | + | chr4.2:38446589-38446608 | MS.gene003867:intron | 50.0% | |
| AGAGAGAGGGGCAGTAGATA+TGG | + | chr4.2:38450541-38450560 | MS.gene003867:CDS | 50.0% | |
| AGATGGGTGGAAGAGTCGTT+GGG | + | chr4.2:38446590-38446609 | MS.gene003867:intron | 50.0% | |
| AGGGAAAGTGGAAGACTCCA+TGG | + | chr4.2:38449626-38449645 | MS.gene003867:CDS | 50.0% | |
| ATCCAGCATACAGAGGACCA+TGG | + | chr4.2:38449490-38449509 | MS.gene003867:CDS | 50.0% | |
| ATTGGGACATCCTTCCTCCA+AGG | + | chr4.2:38448519-38448538 | MS.gene003867:CDS | 50.0% | |
| CAAGAGAAGAGGGCGAAAAG+AGG | + | chr4.2:38450515-38450534 | MS.gene003867:CDS | 50.0% | |
| CAGAGGACCATGGAAACGAA+AGG | + | chr4.2:38449500-38449519 | MS.gene003867:CDS | 50.0% | |
| CAGGATATTGAGTGTGGTGG+TGG | + | chr4.2:38447247-38447266 | MS.gene003867:CDS | 50.0% | |
| CCTGCTGATCCTGATGACAA+AGG | + | chr4.2:38446678-38446697 | MS.gene003867:CDS | 50.0% | |
| CCTTTGTCATCAGGATCAGC+AGG | - | chr4.2:38446681-38446700 | None:intergenic | 50.0% | |
| CGAAAAGAGGAGGAGAGAGA+GGG | + | chr4.2:38450528-38450547 | MS.gene003867:CDS | 50.0% | |
| CGTAGTTCAAGTGGTTGAGC+TGG | - | chr4.2:38447691-38447710 | None:intergenic | 50.0% | |
| CTCTATTGCAGCCAGCAGAT+TGG | + | chr4.2:38448791-38448810 | MS.gene003867:intron | 50.0% | |
| GAAAAGAGGAGGAGAGAGAG+GGG | + | chr4.2:38450529-38450548 | MS.gene003867:CDS | 50.0% | |
| GATCATTGAGGGGAATGGTG+GGG | - | chr4.2:38447504-38447523 | None:intergenic | 50.0% | |
| GGTCCTCTGTATGCTGGATT+AGG | - | chr4.2:38449489-38449508 | None:intergenic | 50.0% | |
| TCCCGATCCGAAAGCCAAAA+AGG | + | chr4.2:38449288-38449307 | MS.gene003867:CDS | 50.0% | |
| TCTTCATCATCCCAGTCAGC+AGG | - | chr4.2:38449438-38449457 | None:intergenic | 50.0% | |
| TTCCATGGTCCTCTGTATGC+TGG | - | chr4.2:38449495-38449514 | None:intergenic | 50.0% | |
| ! | ACTCCTTTTCCCATTAGGCG+GGG | + | chr4.2:38447761-38447780 | MS.gene003867:intron | 50.0% |
| ! | AGGAGGGTAAGCCTTTTCTC+TGG | + | chr4.2:38450580-38450599 | MS.gene003867:CDS | 50.0% |
| ! | CACTCCTTTTCCCATTAGGC+GGG | + | chr4.2:38447760-38447779 | MS.gene003867:intron | 50.0% |
| ! | CCACTCCTTTTCCCATTAGG+CGG | + | chr4.2:38447759-38447778 | MS.gene003867:intron | 50.0% |
| ! | TGTTGGCATTGAAGTGTGGC+AGG | + | chr4.2:38449999-38450018 | MS.gene003867:CDS | 50.0% |
| !! | AATGTATCGGTGTCGTGGCT+AGG | + | chr4.2:38448141-38448160 | MS.gene003867:intron | 50.0% |
| !! | ACCTCTGGTTTGGCATCATC+AGG | - | chr4.2:38448841-38448860 | None:intergenic | 50.0% |
| !! | AGGACACTATAGGAGGCATC+AGG | - | chr4.2:38448458-38448477 | None:intergenic | 50.0% |
| !! | CCTCTGGTTTGGCATCATCA+GGG | - | chr4.2:38448840-38448859 | None:intergenic | 50.0% |
| !! | GTTTGACTAGCCTGCTGACT+GGG | + | chr4.2:38449425-38449444 | MS.gene003867:intron | 50.0% |
| !! | TGAAGCATTGACACGGACAC+CGG | + | chr4.2:38448051-38448070 | MS.gene003867:intron | 50.0% |
| !! | TGCAATGTTGGTGTCGTGTC+CGG | - | chr4.2:38448073-38448092 | None:intergenic | 50.0% |
| !! | TGTTTGACTAGCCTGCTGAC+TGG | + | chr4.2:38449424-38449443 | MS.gene003867:intron | 50.0% |
| AAGAAGGGCTCGGGAAGAAG+AGG | + | chr4.2:38450382-38450401 | MS.gene003867:CDS | 55.0% | |
| ATATAGCCGACCCCGCCTAA+TGG | - | chr4.2:38447774-38447793 | None:intergenic | 55.0% | |
| CCACTTGAACTACGCGCTGA+AGG | + | chr4.2:38447697-38447716 | MS.gene003867:intron | 55.0% | |
| CCGCCTAATGGGAAAAGGAG+TGG | - | chr4.2:38447762-38447781 | None:intergenic | 55.0% | |
| CCTTCAGCGCGTAGTTCAAG+TGG | - | chr4.2:38447700-38447719 | None:intergenic | 55.0% | |
| GAGAAGAGGGCGAAAAGAGG+AGG | + | chr4.2:38450518-38450537 | MS.gene003867:CDS | 55.0% | |
| GCGAAAAGAGGAGGAGAGAG+AGG | + | chr4.2:38450527-38450546 | MS.gene003867:CDS | 55.0% | |
| GCTCGAAGGGCAAGAGAAGA+GGG | + | chr4.2:38450505-38450524 | MS.gene003867:CDS | 55.0% | |
| GGCTCGGGAAGAAGAGGTAA+TGG | + | chr4.2:38450388-38450407 | MS.gene003867:intron | 55.0% | |
| TATAGCCGACCCCGCCTAAT+GGG | - | chr4.2:38447773-38447792 | None:intergenic | 55.0% | |
| TGAACTACGCGCTGAAGGCA+AGG | + | chr4.2:38447702-38447721 | MS.gene003867:intron | 55.0% | |
| TTCGGATCGGGAATTTCCGC+TGG | - | chr4.2:38449280-38449299 | None:intergenic | 55.0% | |
| ! | CCCTGATGATGCCAAACCAG+AGG | + | chr4.2:38448837-38448856 | MS.gene003867:CDS | 55.0% |
| ! | CTTTTCCCATTAGGCGGGGT+CGG | + | chr4.2:38447765-38447784 | MS.gene003867:intron | 55.0% |
| !! | AGATAAGAGGCGCCGTAGGA+GGG | + | chr4.2:38450564-38450583 | MS.gene003867:CDS | 55.0% |
| !! | ATGGAGATAAGAGGCGCCGT+AGG | + | chr4.2:38450560-38450579 | MS.gene003867:CDS | 55.0% |
| !! | CAGTGTCGGCGTTGCAATGT+TGG | - | chr4.2:38448085-38448104 | None:intergenic | 55.0% |
| CGACCCCGCCTAATGGGAAA+AGG | - | chr4.2:38447767-38447786 | None:intergenic | 60.0% | |
| GGCTCGAAGGGCAAGAGAAG+AGG | + | chr4.2:38450504-38450523 | MS.gene003867:CDS | 60.0% | |
| !! | GAGATAAGAGGCGCCGTAGG+AGG | + | chr4.2:38450563-38450582 | MS.gene003867:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.2 | gene | 38446317 | 38450609 | 38446317 | ID=MS.gene003867 |
| chr4.2 | mRNA | 38446317 | 38450609 | 38446317 | ID=MS.gene003867.t1;Parent=MS.gene003867 |
| chr4.2 | exon | 38446317 | 38446419 | 38446317 | ID=MS.gene003867.t1.exon1;Parent=MS.gene003867.t1 |
| chr4.2 | CDS | 38446317 | 38446419 | 38446317 | ID=cds.MS.gene003867.t1;Parent=MS.gene003867.t1 |
| chr4.2 | exon | 38446592 | 38446699 | 38446592 | ID=MS.gene003867.t1.exon2;Parent=MS.gene003867.t1 |
| chr4.2 | CDS | 38446592 | 38446699 | 38446592 | ID=cds.MS.gene003867.t1;Parent=MS.gene003867.t1 |
| chr4.2 | exon | 38447140 | 38447332 | 38447140 | ID=MS.gene003867.t1.exon3;Parent=MS.gene003867.t1 |
| chr4.2 | CDS | 38447140 | 38447332 | 38447140 | ID=cds.MS.gene003867.t1;Parent=MS.gene003867.t1 |
| chr4.2 | exon | 38448310 | 38448568 | 38448310 | ID=MS.gene003867.t1.exon4;Parent=MS.gene003867.t1 |
| chr4.2 | CDS | 38448310 | 38448568 | 38448310 | ID=cds.MS.gene003867.t1;Parent=MS.gene003867.t1 |
| chr4.2 | exon | 38448802 | 38448858 | 38448802 | ID=MS.gene003867.t1.exon5;Parent=MS.gene003867.t1 |
| chr4.2 | CDS | 38448802 | 38448858 | 38448802 | ID=cds.MS.gene003867.t1;Parent=MS.gene003867.t1 |
| chr4.2 | exon | 38449262 | 38449309 | 38449262 | ID=MS.gene003867.t1.exon6;Parent=MS.gene003867.t1 |
| chr4.2 | CDS | 38449262 | 38449309 | 38449262 | ID=cds.MS.gene003867.t1;Parent=MS.gene003867.t1 |
| chr4.2 | exon | 38449435 | 38449521 | 38449435 | ID=MS.gene003867.t1.exon7;Parent=MS.gene003867.t1 |
| chr4.2 | CDS | 38449435 | 38449521 | 38449435 | ID=cds.MS.gene003867.t1;Parent=MS.gene003867.t1 |
| chr4.2 | exon | 38449604 | 38449661 | 38449604 | ID=MS.gene003867.t1.exon8;Parent=MS.gene003867.t1 |
| chr4.2 | CDS | 38449604 | 38449661 | 38449604 | ID=cds.MS.gene003867.t1;Parent=MS.gene003867.t1 |
| chr4.2 | exon | 38449953 | 38450020 | 38449953 | ID=MS.gene003867.t1.exon9;Parent=MS.gene003867.t1 |
| chr4.2 | CDS | 38449953 | 38450020 | 38449953 | ID=cds.MS.gene003867.t1;Parent=MS.gene003867.t1 |
| chr4.2 | exon | 38450158 | 38450253 | 38450158 | ID=MS.gene003867.t1.exon10;Parent=MS.gene003867.t1 |
| chr4.2 | CDS | 38450158 | 38450253 | 38450158 | ID=cds.MS.gene003867.t1;Parent=MS.gene003867.t1 |
| chr4.2 | exon | 38450347 | 38450403 | 38450347 | ID=MS.gene003867.t1.exon11;Parent=MS.gene003867.t1 |
| chr4.2 | CDS | 38450347 | 38450403 | 38450347 | ID=cds.MS.gene003867.t1;Parent=MS.gene003867.t1 |
| chr4.2 | exon | 38450502 | 38450609 | 38450502 | ID=MS.gene003867.t1.exon12;Parent=MS.gene003867.t1 |
| chr4.2 | CDS | 38450502 | 38450609 | 38450502 | ID=cds.MS.gene003867.t1;Parent=MS.gene003867.t1 |
| Gene Sequence |
| Protein sequence |
