Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene005307.t1 | XP_003591212.1 | 99.5 | 364 | 2 | 0 | 27 | 390 | 1 | 364 | 1.70E-165 | 592.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene005307.t1 | O81919 | 90.1 | 365 | 35 | 1 | 27 | 390 | 1 | 365 | 2.1e-151 | 537.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene005307.t1 | G7I9H2 | 99.5 | 364 | 2 | 0 | 27 | 390 | 1 | 364 | 1.2e-165 | 592.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene95690 | MS.gene005307 | PPI |
| MS.gene005307 | MS.gene056500 | PPI |
| MS.gene005307 | MS.gene074437 | PPI |
| MS.gene005307 | MS.gene32605 | PPI |
| MS.gene005307 | MS.gene006458 | PPI |
| MS.gene005307 | MS.gene93050 | PPI |
| MS.gene005307 | MS.gene051100 | PPI |
| MS.gene005307 | MS.gene26890 | PPI |
| MS.gene005307 | MS.gene33573 | PPI |
| MS.gene005307 | MS.gene28326 | PPI |
| MS.gene005307 | MS.gene024055 | PPI |
| MS.gene005307 | MS.gene52596 | PPI |
| MS.gene005307 | MS.gene44181 | PPI |
| MS.gene005307 | MS.gene30421 | PPI |
| MS.gene005307 | MS.gene056396 | PPI |
| MS.gene005307 | MS.gene014809 | PPI |
| MS.gene005307 | MS.gene056598 | PPI |
| MS.gene005307 | MS.gene80048 | PPI |
| MS.gene005307 | MS.gene25107 | PPI |
| MS.gene005307 | MS.gene014807 | PPI |
| MS.gene005307 | MS.gene32604 | PPI |
| MS.gene005307 | MS.gene072925 | PPI |
| MS.gene005307 | MS.gene32606 | PPI |
| MS.gene005307 | MS.gene072924 | PPI |
| MS.gene005307 | MS.gene008784 | PPI |
| MS.gene005307 | MS.gene014808 | PPI |
| MS.gene005307 | MS.gene40797 | PPI |
| MS.gene005307 | MS.gene003867 | PPI |
| MS.gene005307 | MS.gene072926 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene005307.t1 | MTR_1g083960 | 99.292 | 424 | 2 | 1 | 27 | 450 | 1 | 423 | 0.0 | 844 |
| MS.gene005307.t1 | MTR_7g080370 | 63.897 | 349 | 124 | 1 | 36 | 382 | 9 | 357 | 3.67e-171 | 486 |
| MS.gene005307.t1 | MTR_7g080370 | 63.897 | 349 | 124 | 1 | 36 | 382 | 9 | 357 | 4.06e-171 | 487 |
| MS.gene005307.t1 | MTR_4g068080 | 61.538 | 351 | 135 | 0 | 27 | 377 | 1 | 351 | 5.21e-166 | 474 |
| MS.gene005307.t1 | MTR_8g095680 | 38.795 | 415 | 185 | 14 | 27 | 379 | 1 | 408 | 3.46e-62 | 211 |
| MS.gene005307.t1 | MTR_3g098430 | 36.408 | 412 | 196 | 14 | 27 | 379 | 1 | 405 | 5.60e-60 | 205 |
| MS.gene005307.t1 | MTR_3g098430 | 36.408 | 412 | 196 | 14 | 27 | 379 | 1 | 405 | 7.60e-60 | 204 |
| MS.gene005307.t1 | MTR_3g096590 | 75.238 | 105 | 19 | 3 | 346 | 450 | 363 | 460 | 6.96e-28 | 115 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene005307.t1 | AT1G09210 | 79.952 | 419 | 82 | 2 | 34 | 450 | 6 | 424 | 0.0 | 623 |
| MS.gene005307.t1 | AT1G56340 | 84.958 | 359 | 54 | 0 | 33 | 391 | 5 | 363 | 0.0 | 620 |
| MS.gene005307.t1 | AT1G56340 | 84.533 | 375 | 58 | 0 | 33 | 407 | 5 | 379 | 0.0 | 618 |
| MS.gene005307.t1 | AT1G08450 | 58.197 | 366 | 153 | 0 | 36 | 401 | 14 | 379 | 3.59e-165 | 472 |
| MS.gene005307.t1 | AT1G08450 | 52.732 | 366 | 148 | 1 | 36 | 401 | 14 | 354 | 1.97e-143 | 416 |
| MS.gene005307.t1 | AT1G08450 | 43.243 | 370 | 148 | 3 | 36 | 401 | 14 | 325 | 2.88e-104 | 315 |
| MS.gene005307.t1 | AT5G61790 | 38.384 | 396 | 185 | 12 | 36 | 379 | 13 | 401 | 1.26e-71 | 235 |
| MS.gene005307.t1 | AT5G07340 | 37.046 | 413 | 191 | 14 | 45 | 402 | 22 | 420 | 4.53e-57 | 197 |
| MS.gene005307.t1 | AT5G07340 | 37.592 | 407 | 184 | 15 | 51 | 402 | 37 | 428 | 6.99e-57 | 197 |
Find 137 sgRNAs with CRISPR-Local
Find 236 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACCTCTGGCTTCTTGTCTTC+AGG | 0.169701 | 1.1:+62211189 | None:intergenic |
| TTCCATGGTCCCTTGTACTC+TGG | 0.182700 | 1.1:+62210894 | None:intergenic |
| GTTCATGCTTGACAGAAAAT+TGG | 0.241397 | 1.1:+62211800 | None:intergenic |
| TTATCCTTGTTGCTGAATTC+AGG | 0.265305 | 1.1:+62211835 | None:intergenic |
| ATGTACGTCGTCCTCTTTAT+TGG | 0.266525 | 1.1:+62210008 | None:intergenic |
| TTCCACTTTCCACTGTAGTT+GGG | 0.290555 | 1.1:+62210764 | None:intergenic |
| TCAGGATCAGCAACCTCTTT+AGG | 0.312415 | 1.1:+62211062 | None:intergenic |
| TTCCATTGCAATGGCGATTA+GGG | 0.314157 | 1.1:-62213120 | MS.gene005307:CDS |
| AGAACGAGAGAGAGAAGGTT+AGG | 0.314409 | 1.1:+62213089 | None:intergenic |
| CTTCCACTTTCCACTGTAGT+TGG | 0.316605 | 1.1:+62210763 | None:intergenic |
| GATGTTGATCAGAAGAAATT+TGG | 0.323562 | 1.1:-62211733 | MS.gene005307:CDS |
| CCTCTGGCTTCTTGTCTTCA+GGG | 0.335164 | 1.1:+62211190 | None:intergenic |
| ATTCCATTGCAATGGCGATT+AGG | 0.335328 | 1.1:-62213121 | MS.gene005307:CDS |
| CAAGGACCCAGAGGCCAAAA+AGG | 0.346525 | 1.1:-62211345 | MS.gene005307:intron |
| GGCTTCTTGTCTTCAGGGTC+AGG | 0.351167 | 1.1:+62211195 | None:intergenic |
| TCCTTATCATCCCAATCTTC+TGG | 0.358229 | 1.1:+62211225 | None:intergenic |
| GTACTGTAACCACAGATATC+TGG | 0.359127 | 1.1:+62211569 | None:intergenic |
| TGCTGATCCTGATGCCAAAA+AGG | 0.359945 | 1.1:-62211051 | MS.gene005307:intron |
| TCCATGGTCCCTTGTACTCT+GGG | 0.365819 | 1.1:+62210895 | None:intergenic |
| TCGCAGAAGCGATGGATAGA+AGG | 0.367240 | 1.1:+62213060 | None:intergenic |
| TTAACTTTGCAGGTGAAATC+TGG | 0.376979 | 1.1:-62210480 | MS.gene005307:intron |
| TTGTTTGCAGGATGAGCTCT+AGG | 0.388195 | 1.1:-62209906 | None:intergenic |
| TATATATTTACCAGACTTCA+AGG | 0.404034 | 1.1:-62210637 | MS.gene005307:intron |
| AGCAACTTGCTTAGCATACT+CGG | 0.412572 | 1.1:+62210422 | None:intergenic |
| AATACTTACAGCCAGAAGAT+TGG | 0.416134 | 1.1:-62211236 | MS.gene005307:intron |
| GAACATCCTTCTTGATTAAG+TGG | 0.416832 | 1.1:+62211507 | None:intergenic |
| ATGCCAACATACTTCAACTT+GGG | 0.437777 | 1.1:+62210591 | None:intergenic |
| ATACTTACAGCCAGAAGATT+GGG | 0.440491 | 1.1:-62211235 | MS.gene005307:intron |
| TATCCTTGTTGCTGAATTCA+GGG | 0.448897 | 1.1:+62211836 | None:intergenic |
| ATAAAATCTGTAATCTTCAC+TGG | 0.449401 | 1.1:+62211876 | None:intergenic |
| AAACAAACCTTTGGCTTCCA+TGG | 0.453885 | 1.1:+62210879 | None:intergenic |
| AGAGTCATGGCTAACTTCAT+TGG | 0.454725 | 1.1:+62210074 | None:intergenic |
| GAACGAGAGAGAGAAGGTTA+GGG | 0.456719 | 1.1:+62213090 | None:intergenic |
| TAAGTGGTTTGTGTCATTGT+AGG | 0.461585 | 1.1:+62211523 | None:intergenic |
| GCCAGAAGATTGGGATGATA+AGG | 0.462026 | 1.1:-62211226 | MS.gene005307:CDS |
| CATTGCCAACCCAGAGTACA+AGG | 0.463149 | 1.1:-62210904 | MS.gene005307:CDS |
| TCCACTTTCCACTGTAGTTG+GGG | 0.465244 | 1.1:+62210765 | None:intergenic |
| CTGGTAGTCTTTACTCTGAC+TGG | 0.467326 | 1.1:-62211391 | MS.gene005307:CDS |
| CGTTGATTCTGATGCGGAAG+AGG | 0.469655 | 1.1:-62210109 | MS.gene005307:CDS |
| TTGGGGAAAACATAGATGTC+AGG | 0.470534 | 1.1:+62210609 | None:intergenic |
| GATAATGTGGAGAAGCAAAC+TGG | 0.475988 | 1.1:-62211410 | MS.gene005307:CDS |
| AGAAACATGGGGCAAGCAAA+AGG | 0.486201 | 1.1:-62210397 | MS.gene005307:CDS |
| AGAAGGATGAGAACTTGGCC+GGG | 0.487362 | 1.1:-62212067 | MS.gene005307:CDS |
| ATGAGAACTTGGCCGGGGAG+TGG | 0.492077 | 1.1:-62212061 | MS.gene005307:CDS |
| AAAATGCTGTAGGTTGCATC+AGG | 0.493543 | 1.1:+62211437 | None:intergenic |
| CGCAGAAGCGATGGATAGAA+GGG | 0.494372 | 1.1:+62213061 | None:intergenic |
| TCCTCATCATCCCAGTCCTC+AGG | 0.495577 | 1.1:+62210951 | None:intergenic |
| TTCCCCAAGTTGAAGTATGT+TGG | 0.497182 | 1.1:-62210594 | MS.gene005307:CDS |
| CTTGTACTCTGGGTTGGCAA+TGG | 0.498402 | 1.1:+62210905 | None:intergenic |
| GAAAACCTTCGCAGAAGCGA+TGG | 0.502839 | 1.1:+62213052 | None:intergenic |
| AGCAAGTTGCTGAAGAAACA+TGG | 0.506018 | 1.1:-62210410 | MS.gene005307:CDS |
| TATGTTCTTGCAGGCTGAGA+AGG | 0.508527 | 1.1:-62210295 | MS.gene005307:intron |
| TTCTTCGAAGAGCGCTTCGA+AGG | 0.509596 | 1.1:-62213032 | MS.gene005307:intron |
| TTCTGATGCGGAAGAGGATG+AGG | 0.510129 | 1.1:-62210103 | MS.gene005307:CDS |
| ATGGAAGAAGGATGAGAACT+TGG | 0.515979 | 1.1:-62212072 | MS.gene005307:CDS |
| TCTATCCATCGCTTCTGCGA+AGG | 0.516389 | 1.1:-62213057 | MS.gene005307:CDS |
| AAGAAGGATGAGAACTTGGC+CGG | 0.516801 | 1.1:-62212068 | MS.gene005307:CDS |
| AATGCCAACATACTTCAACT+TGG | 0.516939 | 1.1:+62210590 | None:intergenic |
| GGAACTACACCTCTGGTCAA+TGG | 0.518922 | 1.1:-62212040 | MS.gene005307:CDS |
| CTCTTCCGCATCAGAATCAA+CGG | 0.521513 | 1.1:+62210110 | None:intergenic |
| TTCAGGGAACTCAGCAGAGA+TGG | 0.522780 | 1.1:+62211852 | None:intergenic |
| GGTAAAATCTGAATGGAAGA+AGG | 0.524814 | 1.1:-62212084 | MS.gene005307:CDS |
| TGGTCCCTTGTACTCTGGGT+TGG | 0.525060 | 1.1:+62210899 | None:intergenic |
| AAACCTGGGTTGTCAATCAA+TGG | 0.532475 | 1.1:+62210737 | None:intergenic |
| ATTGGGTGAGTGCCACGTAC+GGG | 0.532537 | 1.1:+62213318 | None:intergenic |
| TGTTGTGTAGCCTGAGGACT+GGG | 0.537049 | 1.1:-62210961 | MS.gene005307:intron |
| CATTGGGTGAGTGCCACGTA+CGG | 0.539643 | 1.1:+62213317 | None:intergenic |
| AACCCTAATCGCCATTGCAA+TGG | 0.540276 | 1.1:+62213118 | None:intergenic |
| TGTGGCAGATTGTGGCCATT+GGG | 0.544843 | 1.1:+62213301 | None:intergenic |
| TCTTCCGCATCAGAATCAAC+GGG | 0.545764 | 1.1:+62210111 | None:intergenic |
| CACAAACCACTTAATCAAGA+AGG | 0.545807 | 1.1:-62211513 | MS.gene005307:CDS |
| GGGGAGTGGAACTACACCTC+TGG | 0.546989 | 1.1:-62212047 | MS.gene005307:CDS |
| ATGTGGCAGATTGTGGCCAT+TGG | 0.547859 | 1.1:+62213300 | None:intergenic |
| GCAACTTGCTTAGCATACTC+GGG | 0.550973 | 1.1:+62210423 | None:intergenic |
| CTAAAGATGGATGGGAAAGC+CGG | 0.553813 | 1.1:-62212109 | MS.gene005307:intron |
| GCCGGTGGGTAAAATCTGAA+TGG | 0.553831 | 1.1:-62212091 | MS.gene005307:CDS |
| TGTTTGCAGGATGAGCTCTA+GGG | 0.555016 | 1.1:-62209905 | None:intergenic |
| TGTTGAATGCTAAAGATGGA+TGG | 0.555665 | 1.1:-62212118 | MS.gene005307:intron |
| ACCCCAACTACAGTGGAAAG+TGG | 0.558201 | 1.1:-62210766 | MS.gene005307:CDS |
| ATTATCAATCAAAATGCTGT+AGG | 0.565497 | 1.1:+62211427 | None:intergenic |
| TTGTTGTGTAGCCTGAGGAC+TGG | 0.566755 | 1.1:-62210962 | MS.gene005307:intron |
| ACGTACGGGAAGATTGTCAT+TGG | 0.566797 | 1.1:+62213332 | None:intergenic |
| CAGCGATGAAACCAATAAAG+AGG | 0.572191 | 1.1:-62210019 | MS.gene005307:CDS |
| CTTAGCATACTCGGGATCAT+CGG | 0.572247 | 1.1:+62210431 | None:intergenic |
| AGAAAAGAACGAGAGAGAGA+AGG | 0.573982 | 1.1:+62213084 | None:intergenic |
| TGACTCTGATGATGAGTCAA+AGG | 0.575775 | 1.1:-62210058 | MS.gene005307:CDS |
| ATACGATGACATTCCTAAAG+AGG | 0.576967 | 1.1:-62211075 | MS.gene005307:CDS |
| GATATTATAAATCACCTGTA+GGG | 0.577404 | 1.1:+62211700 | None:intergenic |
| TCTCCCACCAAAGAAAATCA+AGG | 0.577520 | 1.1:-62211363 | MS.gene005307:CDS |
| TTGGCGGTGATACTCCCTAC+AGG | 0.578535 | 1.1:-62211714 | MS.gene005307:intron |
| GTTGAATGCTAAAGATGGAT+GGG | 0.579079 | 1.1:-62212117 | MS.gene005307:intron |
| CAGAAACTTGACTGTGGTGG+TGG | 0.579680 | 1.1:-62211778 | MS.gene005307:CDS |
| GTTGATCAGAAGAAATTTGG+CGG | 0.581881 | 1.1:-62211730 | MS.gene005307:CDS |
| AGAGGTGTAGTTCCACTCCC+CGG | 0.582515 | 1.1:+62212049 | None:intergenic |
| AACTCATTGTCAGGAAACAA+AGG | 0.583402 | 1.1:-62210139 | MS.gene005307:intron |
| AGCTGAGAAGAAGAAAGAAG+AGG | 0.584374 | 1.1:-62210259 | MS.gene005307:CDS |
| GGTTACATGAAGTTGCTTAG+CGG | 0.587170 | 1.1:-62211757 | MS.gene005307:CDS |
| GCAAGTTGCTGAAGAAACAT+GGG | 0.587236 | 1.1:-62210409 | MS.gene005307:CDS |
| TGCTGTAGGTTGCATCAGGA+CGG | 0.587388 | 1.1:+62211441 | None:intergenic |
| GATGAGTCAAAGGCAGAAGC+TGG | 0.589511 | 1.1:-62210048 | MS.gene005307:CDS |
| GACTGGGATGATGAGGAAGA+TGG | 0.589626 | 1.1:-62210945 | MS.gene005307:CDS |
| AGCGAGCGATTCCATTGCAA+TGG | 0.589635 | 1.1:-62213129 | MS.gene005307:CDS |
| TGTTGGCATTGAATTGTGGC+AGG | 0.591537 | 1.1:-62210577 | MS.gene005307:intron |
| GAAGGATGAGAACTTGGCCG+GGG | 0.593588 | 1.1:-62212066 | MS.gene005307:CDS |
| GGACAATATGTGGCAGATTG+TGG | 0.594348 | 1.1:+62213293 | None:intergenic |
| TTGACTCATCATCAGAGTCA+TGG | 0.601599 | 1.1:+62210061 | None:intergenic |
| TACTCTGGGTTGGCAATGGT+AGG | 0.604644 | 1.1:+62210909 | None:intergenic |
| TACACCTCTGGTCAATGGAA+TGG | 0.606107 | 1.1:-62212035 | MS.gene005307:CDS |
| CGTACGTGGCACTCACCCAA+TGG | 0.606462 | 1.1:-62213316 | MS.gene005307:CDS |
| TGCCAACATACTTCAACTTG+GGG | 0.607807 | 1.1:+62210592 | None:intergenic |
| AAGATGGATGGGAAAGCCGG+TGG | 0.610833 | 1.1:-62212106 | MS.gene005307:CDS |
| TTGCTTACGTGGACAATATG+TGG | 0.610903 | 1.1:+62213283 | None:intergenic |
| TGAGAAGAAGAAAGAAGAGG+AGG | 0.621039 | 1.1:-62210256 | MS.gene005307:intron |
| GCCTGAGGACTGGGATGATG+AGG | 0.621427 | 1.1:-62210952 | MS.gene005307:CDS |
| CAACTACAGTGGAAAGTGGA+AGG | 0.622242 | 1.1:-62210762 | MS.gene005307:CDS |
| TGGGGAAAACATAGATGTCA+GGG | 0.628802 | 1.1:+62210610 | None:intergenic |
| ATGTGTAAACATGAGTAAGC+TGG | 0.631281 | 1.1:+62211471 | None:intergenic |
| ATCAAGAACCCCAACTACAG+TGG | 0.637028 | 1.1:-62210773 | MS.gene005307:CDS |
| ACCCAGAGTACAAGGGACCA+TGG | 0.641246 | 1.1:-62210896 | MS.gene005307:CDS |
| GTAAGCTGGTCAGTCTCACA+AGG | 0.646980 | 1.1:+62211485 | None:intergenic |
| AGTATGTTGGCATTGAATTG+TGG | 0.647006 | 1.1:-62210581 | MS.gene005307:CDS |
| ATGATGAGGAAGATGGTGAG+TGG | 0.647034 | 1.1:-62210938 | MS.gene005307:CDS |
| AATGGTGACGCTAATGACAA+AGG | 0.650029 | 1.1:-62212017 | MS.gene005307:intron |
| ATGTTTGGTCCAGATATCTG+TGG | 0.653875 | 1.1:-62211578 | MS.gene005307:CDS |
| AATGACAATCTTCCCGTACG+TGG | 0.655653 | 1.1:-62213330 | MS.gene005307:CDS |
| CAAGGGACCATGGAAGCCAA+AGG | 0.658097 | 1.1:-62210886 | MS.gene005307:intron |
| TGATCCCGTTGATTCTGATG+CGG | 0.665412 | 1.1:-62210115 | MS.gene005307:CDS |
| GCACCATTGATTGACAACCC+AGG | 0.669589 | 1.1:-62210740 | MS.gene005307:intron |
| AAAGAAAATCAAGGACCCAG+AGG | 0.673165 | 1.1:-62211354 | MS.gene005307:CDS |
| GTTCCCTGAATTCAGCAACA+AGG | 0.674436 | 1.1:-62211839 | MS.gene005307:CDS |
| AGATGGATGGGAAAGCCGGT+GGG | 0.676998 | 1.1:-62212105 | MS.gene005307:CDS |
| CCCTGAAGACAAGAAGCCAG+AGG | 0.683823 | 1.1:-62211190 | MS.gene005307:intron |
| CAAGTTGCTGAAGAAACATG+GGG | 0.696192 | 1.1:-62210408 | MS.gene005307:CDS |
| GTCACCATTCCATTGACCAG+AGG | 0.697163 | 1.1:+62212031 | None:intergenic |
| ATTGCCAACCCAGAGTACAA+GGG | 0.731176 | 1.1:-62210903 | MS.gene005307:CDS |
| GAACAGAAACTTGACTGTGG+TGG | 0.776860 | 1.1:-62211781 | MS.gene005307:CDS |
| CATGAACAGAAACTTGACTG+TGG | 0.796573 | 1.1:-62211784 | MS.gene005307:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATTTGCAGTGATAATATTA+TGG | + | chr1.1:62210954-62210973 | None:intergenic | 20.0% |
| !! | ACATTCATGTTTGTAATTTA+TGG | - | chr1.1:62210296-62210315 | MS.gene005307:intron | 20.0% |
| !! | ATAATATAATGAGAGATGAA+TGG | + | chr1.1:62212234-62212253 | None:intergenic | 20.0% |
| !! | ATGAAATGAAAAAAGAGATA+TGG | + | chr1.1:62210244-62210263 | None:intergenic | 20.0% |
| !! | ATGATTAGAAATTAGAAAGT+AGG | + | chr1.1:62211974-62211993 | None:intergenic | 20.0% |
| !! | ATTCATCTCTCATTATATTA+TGG | - | chr1.1:62212233-62212252 | MS.gene005307:intron | 20.0% |
| !! | TGATATATTGCAATATGTTT+AGG | - | chr1.1:62212396-62212415 | MS.gene005307:intron | 20.0% |
| !!! | TTGATTTGTTTACTAACTTT+TGG | - | chr1.1:62212421-62212440 | MS.gene005307:intron | 20.0% |
| ! | AAAACTAGCATTCTTTAATC+CGG | + | chr1.1:62210672-62210691 | None:intergenic | 25.0% |
| ! | AATTTGATCTAATCCAAACA+AGG | - | chr1.1:62210928-62210947 | MS.gene005307:CDS | 25.0% |
| ! | ATAAAATCTGTAATCTTCAC+TGG | + | chr1.1:62211363-62211382 | None:intergenic | 25.0% |
| ! | ATACAAAAGCTTAGAGTAAA+AGG | + | chr1.1:62212077-62212096 | None:intergenic | 25.0% |
| ! | ATACTAAATAAACTCGAACA+TGG | + | chr1.1:62211023-62211042 | None:intergenic | 25.0% |
| ! | ATCAAAACACAAGTTAGAAA+AGG | + | chr1.1:62211092-62211111 | None:intergenic | 25.0% |
| ! | ATTATCAATCAAAATGCTGT+AGG | + | chr1.1:62211812-62211831 | None:intergenic | 25.0% |
| ! | ATTATGTTGAATGCTAAAGA+TGG | - | chr1.1:62211114-62211133 | MS.gene005307:intron | 25.0% |
| ! | CCTTAAGGAATAAAACTTAA+TGG | - | chr1.1:62212896-62212915 | MS.gene005307:intron | 25.0% |
| ! | GATATTATAAATCACCTGTA+GGG | + | chr1.1:62211539-62211558 | None:intergenic | 25.0% |
| ! | GGATTGTAAACAAAATGAAA+TGG | + | chr1.1:62210599-62210618 | None:intergenic | 25.0% |
| ! | GGTTAATTAATCTTTGATCA+TGG | - | chr1.1:62210527-62210546 | MS.gene005307:intron | 25.0% |
| ! | GTAGGAATACATAAAACAAA+AGG | + | chr1.1:62211956-62211975 | None:intergenic | 25.0% |
| ! | TACATAAAACAAAAGGAATC+TGG | + | chr1.1:62211949-62211968 | None:intergenic | 25.0% |
| ! | TATATATTTACCAGACTTCA+AGG | - | chr1.1:62212599-62212618 | MS.gene005307:intron | 25.0% |
| ! | TATCTAATACACAACATAGT+AGG | + | chr1.1:62212113-62212132 | None:intergenic | 25.0% |
| ! | TCAAAACACAAGTTAGAAAA+GGG | + | chr1.1:62211091-62211110 | None:intergenic | 25.0% |
| ! | TGAAAAAAGAGATATGGAAA+TGG | + | chr1.1:62210238-62210257 | None:intergenic | 25.0% |
| ! | TGAAAGAGATAAAACTAGAA+GGG | + | chr1.1:62211561-62211580 | None:intergenic | 25.0% |
| !! | CAATCCTTTTAATCTCATTT+CGG | - | chr1.1:62210613-62210632 | MS.gene005307:CDS | 25.0% |
| !! | TAATTTTGCAGTATCATGTT+TGG | - | chr1.1:62211643-62211662 | MS.gene005307:intron | 25.0% |
| !! | TGTGATTGAATTTTCATGAT+CGG | - | chr1.1:62210361-62210380 | MS.gene005307:intron | 25.0% |
| !! | TTTCTATTCACTCAATCTTT+TGG | - | chr1.1:62212873-62212892 | MS.gene005307:intron | 25.0% |
| !!! | CCATTAAGTTTTATTCCTTA+AGG | + | chr1.1:62212899-62212918 | None:intergenic | 25.0% |
| AAACCAGCAACAATAAAACA+AGG | + | chr1.1:62211270-62211289 | None:intergenic | 30.0% | |
| AACTATAAACGTAGGTGAAA+AGG | + | chr1.1:62211920-62211939 | None:intergenic | 30.0% | |
| AATTACACAACAATGCACAA+AGG | + | chr1.1:62210334-62210353 | None:intergenic | 30.0% | |
| ACAATCAGTTCATTAAAAGC+TGG | + | chr1.1:62210772-62210791 | None:intergenic | 30.0% | |
| ACTAAAATGCTCAAATCAAG+TGG | + | chr1.1:62212712-62212731 | None:intergenic | 30.0% | |
| ACTATAAACGTAGGTGAAAA+GGG | + | chr1.1:62211919-62211938 | None:intergenic | 30.0% | |
| CAAAACACAAGTTAGAAAAG+GGG | + | chr1.1:62211090-62211109 | None:intergenic | 30.0% | |
| GATGTTGATCAGAAGAAATT+TGG | - | chr1.1:62211503-62211522 | MS.gene005307:CDS | 30.0% | |
| GGATATTATAAATCACCTGT+AGG | + | chr1.1:62211540-62211559 | None:intergenic | 30.0% | |
| GGCAATTAAACTATAAACGT+AGG | + | chr1.1:62211928-62211947 | None:intergenic | 30.0% | |
| GTGAAAGAGATAAAACTAGA+AGG | + | chr1.1:62211562-62211581 | None:intergenic | 30.0% | |
| TAACTTCAACTGCAAAAACA+AGG | + | chr1.1:62212534-62212553 | None:intergenic | 30.0% | |
| TCTGACATTCTGTATTTGTA+GGG | - | chr1.1:62212138-62212157 | MS.gene005307:intron | 30.0% | |
| TCTTCCGAAATGAGATTAAA+AGG | + | chr1.1:62210620-62210639 | None:intergenic | 30.0% | |
| TGAATTGAAAGATGATACTG+AGG | - | chr1.1:62211296-62211315 | MS.gene005307:intron | 30.0% | |
| ! | GGTAAATTTGGTAATTTACG+TGG | + | chr1.1:62209982-62210001 | None:intergenic | 30.0% |
| ! | TTAATGGATGTTGATCTCTT+TGG | - | chr1.1:62212912-62212931 | MS.gene005307:intron | 30.0% |
| !! | AAGGGGAAAATATTGATTTG+AGG | + | chr1.1:62211073-62211092 | None:intergenic | 30.0% |
| !! | ATGTTGGTTTGAAAACGATT+TGG | - | chr1.1:62210493-62210512 | MS.gene005307:intron | 30.0% |
| !! | GATAATATTATGGCCTTGTT+TGG | + | chr1.1:62210944-62210963 | None:intergenic | 30.0% |
| !!! | CAGCATTTTGATTGATAATG+TGG | - | chr1.1:62211813-62211832 | MS.gene005307:CDS | 30.0% |
| !!! | TTTCTTTCCTTTTTTCGTTG+AGG | - | chr1.1:62210992-62211011 | MS.gene005307:intron | 30.0% |
| AACTCATTGTCAGGAAACAA+AGG | - | chr1.1:62213097-62213116 | MS.gene005307:CDS | 35.0% | |
| AACTTCCTTAACTCATTGTC+AGG | - | chr1.1:62213088-62213107 | MS.gene005307:CDS | 35.0% | |
| AATAATTGTTGTGTAGCCTG+AGG | - | chr1.1:62212269-62212288 | MS.gene005307:intron | 35.0% | |
| AATACTTACAGCCAGAAGAT+TGG | - | chr1.1:62212000-62212019 | MS.gene005307:intron | 35.0% | |
| AATGCCAACATACTTCAACT+TGG | + | chr1.1:62212649-62212668 | None:intergenic | 35.0% | |
| ATACGATGACATTCCTAAAG+AGG | - | chr1.1:62212161-62212180 | MS.gene005307:intron | 35.0% | |
| ATACTTACAGCCAGAAGATT+GGG | - | chr1.1:62212001-62212020 | MS.gene005307:intron | 35.0% | |
| ATGCCAACATACTTCAACTT+GGG | + | chr1.1:62212648-62212667 | None:intergenic | 35.0% | |
| ATGCTATAAGCTGTGACTTA+CGG | + | chr1.1:62210900-62210919 | None:intergenic | 35.0% | |
| ATGTGTAAACATGAGTAAGC+TGG | + | chr1.1:62211768-62211787 | None:intergenic | 35.0% | |
| CAAATGTTTGATATCTCCAC+AGG | - | chr1.1:62211329-62211348 | MS.gene005307:intron | 35.0% | |
| CACAAACCACTTAATCAAGA+AGG | - | chr1.1:62211723-62211742 | MS.gene005307:CDS | 35.0% | |
| CTAATACACAACATAGTAGG+TGG | + | chr1.1:62212110-62212129 | None:intergenic | 35.0% | |
| CTCTGACATTCTGTATTTGT+AGG | - | chr1.1:62212137-62212156 | MS.gene005307:intron | 35.0% | |
| GAACATCCTTCTTGATTAAG+TGG | + | chr1.1:62211732-62211751 | None:intergenic | 35.0% | |
| GGTAAAATCTGAATGGAAGA+AGG | - | chr1.1:62211152-62211171 | MS.gene005307:intron | 35.0% | |
| GTTCATGCTTGACAGAAAAT+TGG | + | chr1.1:62211439-62211458 | None:intergenic | 35.0% | |
| GTTGAATGCTAAAGATGGAT+GGG | - | chr1.1:62211119-62211138 | MS.gene005307:intron | 35.0% | |
| GTTGATCAGAAGAAATTTGG+CGG | - | chr1.1:62211506-62211525 | MS.gene005307:CDS | 35.0% | |
| TATCCTTGTTGCTGAATTCA+GGG | + | chr1.1:62211403-62211422 | None:intergenic | 35.0% | |
| TGGTGAATATATGTTCTTGC+AGG | - | chr1.1:62212932-62212951 | MS.gene005307:intron | 35.0% | |
| TGTTGAATGCTAAAGATGGA+TGG | - | chr1.1:62211118-62211137 | MS.gene005307:intron | 35.0% | |
| TGTTTCCTGACAATGAGTTA+AGG | + | chr1.1:62213096-62213115 | None:intergenic | 35.0% | |
| TTAACTTTGCAGGTGAAATC+TGG | - | chr1.1:62212756-62212775 | MS.gene005307:intron | 35.0% | |
| TTATCCTTGTTGCTGAATTC+AGG | + | chr1.1:62211404-62211423 | None:intergenic | 35.0% | |
| TTGAAAGATGATACTGAGGT+TGG | - | chr1.1:62211300-62211319 | MS.gene005307:intron | 35.0% | |
| TTTCCACACAAACAAACCTT+TGG | + | chr1.1:62212369-62212388 | None:intergenic | 35.0% | |
| TTTGAATTGTGTTGTGTGTC+CGG | - | chr1.1:62210650-62210669 | MS.gene005307:intron | 35.0% | |
| TTTGTCTCTGTTTGTGTGTA+AGG | - | chr1.1:62210715-62210734 | MS.gene005307:intron | 35.0% | |
| ! | AGTATGTTGGCATTGAATTG+TGG | - | chr1.1:62212655-62212674 | MS.gene005307:intron | 35.0% |
| ! | ATTGTTTCTTTCAGTGCTGT+GGG | + | chr1.1:62210003-62210022 | None:intergenic | 35.0% |
| ! | TAAGTGGTTTGTGTCATTGT+AGG | + | chr1.1:62211716-62211735 | None:intergenic | 35.0% |
| ! | TGGGAAACAACTAACCTTTT+TGG | + | chr1.1:62212202-62212221 | None:intergenic | 35.0% |
| !! | AGAGTAAAAGGTATTACCTC+TGG | + | chr1.1:62212065-62212084 | None:intergenic | 35.0% |
| !!! | AACGATTTGGCACGTTTTTT+TGG | - | chr1.1:62210506-62210525 | MS.gene005307:intron | 35.0% |
| !!! | CAACCTTGTTTTATTGTTGC+TGG | - | chr1.1:62211264-62211283 | MS.gene005307:intron | 35.0% |
| !!! | CAGAATAGCGTGTACTTTTT+TGG | + | chr1.1:62211692-62211711 | None:intergenic | 35.0% |
| !!! | TAACTTTTGGTGTTACGTCT+TGG | - | chr1.1:62212434-62212453 | MS.gene005307:intron | 35.0% |
| AAAATGCTGTAGGTTGCATC+AGG | + | chr1.1:62211802-62211821 | None:intergenic | 40.0% | |
| AAACCTGGGTTGTCAATCAA+TGG | + | chr1.1:62212502-62212521 | None:intergenic | 40.0% | |
| AAAGAAAATCAAGGACCCAG+AGG | - | chr1.1:62211882-62211901 | MS.gene005307:CDS | 40.0% | |
| AATGAGAGTGAGAGCTACTT+TGG | + | chr1.1:62210069-62210088 | None:intergenic | 40.0% | |
| ACAAGGATGAAAAGCAAACC+TGG | + | chr1.1:62212517-62212536 | None:intergenic | 40.0% | |
| AGAAAAGAACGAGAGAGAGA+AGG | + | chr1.1:62210155-62210174 | None:intergenic | 40.0% | |
| AGAGTCATGGCTAACTTCAT+TGG | + | chr1.1:62213165-62213184 | None:intergenic | 40.0% | |
| AGATGAATGGACACAGCAAT+GGG | + | chr1.1:62212221-62212240 | None:intergenic | 40.0% | |
| AGCAAGCTACTTAACTTTGC+AGG | - | chr1.1:62212746-62212765 | MS.gene005307:intron | 40.0% | |
| AGCAAGTTGCTGAAGAAACA+TGG | - | chr1.1:62212826-62212845 | MS.gene005307:intron | 40.0% | |
| AGCTAACATGTGTCATGTCT+TGG | - | chr1.1:62211582-62211601 | MS.gene005307:CDS | 40.0% | |
| AGCTGAGAAGAAGAAAGAAG+AGG | - | chr1.1:62212977-62212996 | MS.gene005307:intron | 40.0% | |
| ATGGAAGAAGGATGAGAACT+TGG | - | chr1.1:62211164-62211183 | MS.gene005307:intron | 40.0% | |
| ATGTACGTCGTCCTCTTTAT+TGG | + | chr1.1:62213231-62213250 | None:intergenic | 40.0% | |
| ATGTTTGGTCCAGATATCTG+TGG | - | chr1.1:62211658-62211677 | MS.gene005307:intron | 40.0% | |
| ATTCCATTGCAATGGCGATT+AGG | - | chr1.1:62210115-62210134 | MS.gene005307:CDS | 40.0% | |
| CAAACCAACATCATCACGTT+CGG | + | chr1.1:62210484-62210503 | None:intergenic | 40.0% | |
| CAAGGATGAAAAGCAAACCT+GGG | + | chr1.1:62212516-62212535 | None:intergenic | 40.0% | |
| CAAGTTGCTGAAGAAACATG+GGG | - | chr1.1:62212828-62212847 | MS.gene005307:intron | 40.0% | |
| CAGCGATGAAACCAATAAAG+AGG | - | chr1.1:62213217-62213236 | MS.gene005307:intron | 40.0% | |
| CATGAACAGAAACTTGACTG+TGG | - | chr1.1:62211452-62211471 | MS.gene005307:CDS | 40.0% | |
| GATAATGTGGAGAAGCAAAC+TGG | - | chr1.1:62211826-62211845 | MS.gene005307:CDS | 40.0% | |
| GCAAGTTGCTGAAGAAACAT+GGG | - | chr1.1:62212827-62212846 | MS.gene005307:intron | 40.0% | |
| GGACTATCCTCAACGAAAAA+AGG | + | chr1.1:62211002-62211021 | None:intergenic | 40.0% | |
| GGTTACATGAAGTTGCTTAG+CGG | - | chr1.1:62211479-62211498 | MS.gene005307:CDS | 40.0% | |
| GTACTGTAACCACAGATATC+TGG | + | chr1.1:62211670-62211689 | None:intergenic | 40.0% | |
| TCATCCTGCAAACAAAAGGA+GGG | + | chr1.1:62213325-62213344 | None:intergenic | 40.0% | |
| TCCTTATCATCCCAATCTTC+TGG | + | chr1.1:62212014-62212033 | None:intergenic | 40.0% | |
| TCTCCCACCAAAGAAAATCA+AGG | - | chr1.1:62211873-62211892 | MS.gene005307:CDS | 40.0% | |
| TGAGAAGAAGAAAGAAGAGG+AGG | - | chr1.1:62212980-62212999 | MS.gene005307:intron | 40.0% | |
| TGCCAACATACTTCAACTTG+GGG | + | chr1.1:62212647-62212666 | None:intergenic | 40.0% | |
| TGGGGAAAACATAGATGTCA+GGG | + | chr1.1:62212629-62212648 | None:intergenic | 40.0% | |
| TTCAGTGCTGTGGGTAAATT+TGG | + | chr1.1:62209994-62210013 | None:intergenic | 40.0% | |
| TTCCACTTTCCACTGTAGTT+GGG | + | chr1.1:62212475-62212494 | None:intergenic | 40.0% | |
| TTCCATTGCAATGGCGATTA+GGG | - | chr1.1:62210116-62210135 | MS.gene005307:CDS | 40.0% | |
| TTGACTCATCATCAGAGTCA+TGG | + | chr1.1:62213178-62213197 | None:intergenic | 40.0% | |
| TTGCTTACGTGGACAATATG+TGG | + | chr1.1:62209956-62209975 | None:intergenic | 40.0% | |
| TTGGGGAAAACATAGATGTC+AGG | + | chr1.1:62212630-62212649 | None:intergenic | 40.0% | |
| ! | AAACAAACCTTTGGCTTCCA+TGG | + | chr1.1:62212360-62212379 | None:intergenic | 40.0% |
| ! | AAGCCAAAGGTTTGTTTGTG+TGG | - | chr1.1:62212363-62212382 | MS.gene005307:intron | 40.0% |
| ! | AATGGTGACGCTAATGACAA+AGG | - | chr1.1:62211219-62211238 | MS.gene005307:CDS | 40.0% |
| ! | AGCAACTTGCTTAGCATACT+CGG | + | chr1.1:62212817-62212836 | None:intergenic | 40.0% |
| ! | CATTGTTTCTTTCAGTGCTG+TGG | + | chr1.1:62210004-62210023 | None:intergenic | 40.0% |
| ! | GGTCCTTGATTTTCTTTGGT+GGG | + | chr1.1:62211879-62211898 | None:intergenic | 40.0% |
| ! | TCCATTCAGATTTTACCCAC+CGG | + | chr1.1:62211149-62211168 | None:intergenic | 40.0% |
| ! | TCTGGGTCCTTGATTTTCTT+TGG | + | chr1.1:62211883-62211902 | None:intergenic | 40.0% |
| ! | TGACTCTGATGATGAGTCAA+AGG | - | chr1.1:62213178-62213197 | MS.gene005307:intron | 40.0% |
| ! | TGCAAAGTTAAGTAGCTTGC+TGG | + | chr1.1:62212747-62212766 | None:intergenic | 40.0% |
| ! | TTCCCCAAGTTGAAGTATGT+TGG | - | chr1.1:62212642-62212661 | MS.gene005307:intron | 40.0% |
| !! | CAACTAACCTTTTTGGCATC+AGG | + | chr1.1:62212195-62212214 | None:intergenic | 40.0% |
| !! | TTCACTGGTTTGAATACCTG+TGG | + | chr1.1:62211348-62211367 | None:intergenic | 40.0% |
| !!! | AGGTGAAAAGGGTACCTTTT+TGG | + | chr1.1:62211908-62211927 | None:intergenic | 40.0% |
| !!! | CACTCAATCTTTTGGCCTTA+AGG | - | chr1.1:62212881-62212900 | MS.gene005307:intron | 40.0% |
| AACCCTAATCGCCATTGCAA+TGG | + | chr1.1:62210121-62210140 | None:intergenic | 45.0% | |
| AAGAAGGATGAGAACTTGGC+CGG | - | chr1.1:62211168-62211187 | MS.gene005307:intron | 45.0% | |
| AGAAACATGGGGCAAGCAAA+AGG | - | chr1.1:62212839-62212858 | MS.gene005307:intron | 45.0% | |
| AGAACGAGAGAGAGAAGGTT+AGG | + | chr1.1:62210150-62210169 | None:intergenic | 45.0% | |
| ATCAAGAACCCCAACTACAG+TGG | - | chr1.1:62212463-62212482 | MS.gene005307:intron | 45.0% | |
| ATGATGAGGAAGATGGTGAG+TGG | - | chr1.1:62212298-62212317 | MS.gene005307:intron | 45.0% | |
| ATTGCCAACCCAGAGTACAA+GGG | - | chr1.1:62212333-62212352 | MS.gene005307:intron | 45.0% | |
| CAACTACAGTGGAAAGTGGA+AGG | - | chr1.1:62212474-62212493 | MS.gene005307:intron | 45.0% | |
| CATCCTGCAAACAAAAGGAG+GGG | + | chr1.1:62213324-62213343 | None:intergenic | 45.0% | |
| CTAAAGATGGATGGGAAAGC+CGG | - | chr1.1:62211127-62211146 | MS.gene005307:intron | 45.0% | |
| CTCATCCTGCAAACAAAAGG+AGG | + | chr1.1:62213326-62213345 | None:intergenic | 45.0% | |
| CTCTTCCGCATCAGAATCAA+CGG | + | chr1.1:62213129-62213148 | None:intergenic | 45.0% | |
| CTGGTAGTCTTTACTCTGAC+TGG | - | chr1.1:62211845-62211864 | MS.gene005307:CDS | 45.0% | |
| CTTAGCATACTCGGGATCAT+CGG | + | chr1.1:62212808-62212827 | None:intergenic | 45.0% | |
| CTTCCACTTTCCACTGTAGT+TGG | + | chr1.1:62212476-62212495 | None:intergenic | 45.0% | |
| GAACAGAAACTTGACTGTGG+TGG | - | chr1.1:62211455-62211474 | MS.gene005307:CDS | 45.0% | |
| GAACGAGAGAGAGAAGGTTA+GGG | + | chr1.1:62210149-62210168 | None:intergenic | 45.0% | |
| GAGATGAATGGACACAGCAA+TGG | + | chr1.1:62212222-62212241 | None:intergenic | 45.0% | |
| GAGCTCATCCTGCAAACAAA+AGG | + | chr1.1:62213329-62213348 | None:intergenic | 45.0% | |
| GCCAGAAGATTGGGATGATA+AGG | - | chr1.1:62212010-62212029 | MS.gene005307:intron | 45.0% | |
| GGACAATATGTGGCAGATTG+TGG | + | chr1.1:62209946-62209965 | None:intergenic | 45.0% | |
| GTTCCCTGAATTCAGCAACA+AGG | - | chr1.1:62211397-62211416 | MS.gene005307:CDS | 45.0% | |
| GTTCTTCCATAGAGTCTCAC+AGG | + | chr1.1:62210830-62210849 | None:intergenic | 45.0% | |
| TAAGCACCTGTGAGACTCTA+TGG | - | chr1.1:62210821-62210840 | MS.gene005307:intron | 45.0% | |
| TACACCTCTGGTCAATGGAA+TGG | - | chr1.1:62211201-62211220 | MS.gene005307:CDS | 45.0% | |
| TATGTTCTTGCAGGCTGAGA+AGG | - | chr1.1:62212941-62212960 | MS.gene005307:intron | 45.0% | |
| TCAGGATCAGCAACCTCTTT+AGG | + | chr1.1:62212177-62212196 | None:intergenic | 45.0% | |
| TCCACTTTCCACTGTAGTTG+GGG | + | chr1.1:62212474-62212493 | None:intergenic | 45.0% | |
| TCTTCCGCATCAGAATCAAC+GGG | + | chr1.1:62213128-62213147 | None:intergenic | 45.0% | |
| TGATCTGAACTGTCGTTGTC+TGG | - | chr1.1:62210436-62210455 | MS.gene005307:CDS | 45.0% | |
| TGCTGATCCTGATGCCAAAA+AGG | - | chr1.1:62212185-62212204 | MS.gene005307:intron | 45.0% | |
| ! | GCAACTTGCTTAGCATACTC+GGG | + | chr1.1:62212816-62212835 | None:intergenic | 45.0% |
| ! | GGGTCCTTGATTTTCTTTGG+TGG | + | chr1.1:62211880-62211899 | None:intergenic | 45.0% |
| ! | TGTTGGCATTGAATTGTGGC+AGG | - | chr1.1:62212659-62212678 | MS.gene005307:intron | 45.0% |
| ! | TTACGTGGATGTTGCTTACG+TGG | + | chr1.1:62209967-62209986 | None:intergenic | 45.0% |
| !! | TGATCCCGTTGATTCTGATG+CGG | - | chr1.1:62213121-62213140 | MS.gene005307:CDS | 45.0% |
| !! | TTTCCCCTCCTTTTGTTTGC+AGG | - | chr1.1:62213318-62213337 | MS.gene005307:CDS | 45.0% |
| ACCCCAACTACAGTGGAAAG+TGG | - | chr1.1:62212470-62212489 | MS.gene005307:intron | 50.0% | |
| AGAAGGATGAGAACTTGGCC+GGG | - | chr1.1:62211169-62211188 | MS.gene005307:intron | 50.0% | |
| AGCGAGCGATTCCATTGCAA+TGG | - | chr1.1:62210107-62210126 | MS.gene005307:CDS | 50.0% | |
| ATGTGGCAGATTGTGGCCAT+TGG | + | chr1.1:62209939-62209958 | None:intergenic | 50.0% | |
| CAGAAACTTGACTGTGGTGG+TGG | - | chr1.1:62211458-62211477 | MS.gene005307:CDS | 50.0% | |
| CATTGCCAACCCAGAGTACA+AGG | - | chr1.1:62212332-62212351 | MS.gene005307:intron | 50.0% | |
| CGCAGAAGCGATGGATAGAA+GGG | + | chr1.1:62210178-62210197 | None:intergenic | 50.0% | |
| GAAAACCTTCGCAGAAGCGA+TGG | + | chr1.1:62210187-62210206 | None:intergenic | 50.0% | |
| GACTGGGATGATGAGGAAGA+TGG | - | chr1.1:62212291-62212310 | MS.gene005307:intron | 50.0% | |
| GATGAGTCAAAGGCAGAAGC+TGG | - | chr1.1:62213188-62213207 | MS.gene005307:intron | 50.0% | |
| GCCGGTGGGTAAAATCTGAA+TGG | - | chr1.1:62211145-62211164 | MS.gene005307:intron | 50.0% | |
| GGAACTACACCTCTGGTCAA+TGG | - | chr1.1:62211196-62211215 | MS.gene005307:CDS | 50.0% | |
| GTAAGCTGGTCAGTCTCACA+AGG | + | chr1.1:62211754-62211773 | None:intergenic | 50.0% | |
| GTCACCATTCCATTGACCAG+AGG | + | chr1.1:62211208-62211227 | None:intergenic | 50.0% | |
| TCCATGGTCCCTTGTACTCT+GGG | + | chr1.1:62212344-62212363 | None:intergenic | 50.0% | |
| TCGCAGAAGCGATGGATAGA+AGG | + | chr1.1:62210179-62210198 | None:intergenic | 50.0% | |
| TCTATCCATCGCTTCTGCGA+AGG | - | chr1.1:62210179-62210198 | MS.gene005307:intron | 50.0% | |
| TGCTGTAGGTTGCATCAGGA+CGG | + | chr1.1:62211798-62211817 | None:intergenic | 50.0% | |
| TGTGGCAGATTGTGGCCATT+GGG | + | chr1.1:62209938-62209957 | None:intergenic | 50.0% | |
| TGTTGTGTAGCCTGAGGACT+GGG | - | chr1.1:62212275-62212294 | MS.gene005307:intron | 50.0% | |
| TTCAGGGAACTCAGCAGAGA+TGG | + | chr1.1:62211387-62211406 | None:intergenic | 50.0% | |
| TTCCATGGTCCCTTGTACTC+TGG | + | chr1.1:62212345-62212364 | None:intergenic | 50.0% | |
| TTCTGATGCGGAAGAGGATG+AGG | - | chr1.1:62213133-62213152 | MS.gene005307:intron | 50.0% | |
| TTGTTGTGTAGCCTGAGGAC+TGG | - | chr1.1:62212274-62212293 | MS.gene005307:intron | 50.0% | |
| ! | ACCTCTGGCTTCTTGTCTTC+AGG | + | chr1.1:62212050-62212069 | None:intergenic | 50.0% |
| ! | CCTCTGGCTTCTTGTCTTCA+GGG | + | chr1.1:62212049-62212068 | None:intergenic | 50.0% |
| ! | GCACCATTGATTGACAACCC+AGG | - | chr1.1:62212496-62212515 | MS.gene005307:intron | 50.0% |
| ! | TGCACCGAACGTGATGATGT+TGG | - | chr1.1:62210477-62210496 | MS.gene005307:intron | 50.0% |
| !! | AGGGTACCTTTTTGGCCTCT+GGG | + | chr1.1:62211900-62211919 | None:intergenic | 50.0% |
| !! | CGTTGATTCTGATGCGGAAG+AGG | - | chr1.1:62213127-62213146 | MS.gene005307:CDS | 50.0% |
| !! | CTTGTACTCTGGGTTGGCAA+TGG | + | chr1.1:62212334-62212353 | None:intergenic | 50.0% |
| !! | GTAGCTTGCTGGTCAGAGTT+TGG | + | chr1.1:62212736-62212755 | None:intergenic | 50.0% |
| !! | TACTCTGGGTTGGCAATGGT+AGG | + | chr1.1:62212330-62212349 | None:intergenic | 50.0% |
| !! | TTCTTCGAAGAGCGCTTCGA+AGG | - | chr1.1:62210204-62210223 | MS.gene005307:intron | 50.0% |
| !!! | AAGGGTACCTTTTTGGCCTC+TGG | + | chr1.1:62211901-62211920 | None:intergenic | 50.0% |
| AAGATGGATGGGAAAGCCGG+TGG | - | chr1.1:62211130-62211149 | MS.gene005307:intron | 55.0% | |
| ACCCAGAGTACAAGGGACCA+TGG | - | chr1.1:62212340-62212359 | MS.gene005307:intron | 55.0% | |
| AGATGGATGGGAAAGCCGGT+GGG | - | chr1.1:62211131-62211150 | MS.gene005307:intron | 55.0% | |
| ATTGGGTGAGTGCCACGTAC+GGG | + | chr1.1:62209921-62209940 | None:intergenic | 55.0% | |
| CAAGGACCCAGAGGCCAAAA+AGG | - | chr1.1:62211891-62211910 | MS.gene005307:intron | 55.0% | |
| CAAGGGACCATGGAAGCCAA+AGG | - | chr1.1:62212350-62212369 | MS.gene005307:intron | 55.0% | |
| CATTGGGTGAGTGCCACGTA+CGG | + | chr1.1:62209922-62209941 | None:intergenic | 55.0% | |
| CCCTGAAGACAAGAAGCCAG+AGG | - | chr1.1:62212046-62212065 | MS.gene005307:CDS | 55.0% | |
| GAAGGATGAGAACTTGGCCG+GGG | - | chr1.1:62211170-62211189 | MS.gene005307:intron | 55.0% | |
| GGCTTCTTGTCTTCAGGGTC+AGG | + | chr1.1:62212044-62212063 | None:intergenic | 55.0% | |
| TCAGGGTCGTCCTTGAAGTC+TGG | + | chr1.1:62212612-62212631 | None:intergenic | 55.0% | |
| TCCTCATCATCCCAGTCCTC+AGG | + | chr1.1:62212288-62212307 | None:intergenic | 55.0% | |
| TGGTCCCTTGTACTCTGGGT+TGG | + | chr1.1:62212340-62212359 | None:intergenic | 55.0% | |
| TTGGCGGTGATACTCCCTAC+AGG | - | chr1.1:62211522-62211541 | MS.gene005307:CDS | 55.0% | |
| ! | AGAGGTGTAGTTCCACTCCC+CGG | + | chr1.1:62211190-62211209 | None:intergenic | 55.0% |
| ATGAGAACTTGGCCGGGGAG+TGG | - | chr1.1:62211175-62211194 | MS.gene005307:intron | 60.0% | |
| CGTACGTGGCACTCACCCAA+TGG | - | chr1.1:62209920-62209939 | MS.gene005307:intron | 60.0% | |
| GCCTGAGGACTGGGATGATG+AGG | - | chr1.1:62212284-62212303 | MS.gene005307:intron | 60.0% | |
| GGGGAGTGGAACTACACCTC+TGG | - | chr1.1:62211189-62211208 | MS.gene005307:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.1 | gene | 62209907 | 62213351 | 62209907 | ID=MS.gene005307 |
| chr1.1 | mRNA | 62209907 | 62213351 | 62209907 | ID=MS.gene005307.t1;Parent=MS.gene005307 |
| chr1.1 | exon | 62213291 | 62213351 | 62213291 | ID=MS.gene005307.t1.exon1;Parent=MS.gene005307.t1 |
| chr1.1 | CDS | 62213291 | 62213351 | 62213291 | ID=cds.MS.gene005307.t1;Parent=MS.gene005307.t1 |
| chr1.1 | exon | 62213033 | 62213149 | 62213033 | ID=MS.gene005307.t1.exon2;Parent=MS.gene005307.t1 |
| chr1.1 | CDS | 62213033 | 62213149 | 62213033 | ID=cds.MS.gene005307.t1;Parent=MS.gene005307.t1 |
| chr1.1 | exon | 62212018 | 62212125 | 62212018 | ID=MS.gene005307.t1.exon3;Parent=MS.gene005307.t1 |
| chr1.1 | CDS | 62212018 | 62212125 | 62212018 | ID=cds.MS.gene005307.t1;Parent=MS.gene005307.t1 |
| chr1.1 | exon | 62211715 | 62211907 | 62211715 | ID=MS.gene005307.t1.exon4;Parent=MS.gene005307.t1 |
| chr1.1 | CDS | 62211715 | 62211907 | 62211715 | ID=cds.MS.gene005307.t1;Parent=MS.gene005307.t1 |
| chr1.1 | exon | 62211346 | 62211604 | 62211346 | ID=MS.gene005307.t1.exon5;Parent=MS.gene005307.t1 |
| chr1.1 | CDS | 62211346 | 62211604 | 62211346 | ID=cds.MS.gene005307.t1;Parent=MS.gene005307.t1 |
| chr1.1 | exon | 62211191 | 62211247 | 62211191 | ID=MS.gene005307.t1.exon6;Parent=MS.gene005307.t1 |
| chr1.1 | CDS | 62211191 | 62211247 | 62211191 | ID=cds.MS.gene005307.t1;Parent=MS.gene005307.t1 |
| chr1.1 | exon | 62211052 | 62211099 | 62211052 | ID=MS.gene005307.t1.exon7;Parent=MS.gene005307.t1 |
| chr1.1 | CDS | 62211052 | 62211099 | 62211052 | ID=cds.MS.gene005307.t1;Parent=MS.gene005307.t1 |
| chr1.1 | exon | 62210887 | 62210973 | 62210887 | ID=MS.gene005307.t1.exon8;Parent=MS.gene005307.t1 |
| chr1.1 | CDS | 62210887 | 62210973 | 62210887 | ID=cds.MS.gene005307.t1;Parent=MS.gene005307.t1 |
| chr1.1 | exon | 62210741 | 62210798 | 62210741 | ID=MS.gene005307.t1.exon9;Parent=MS.gene005307.t1 |
| chr1.1 | CDS | 62210741 | 62210798 | 62210741 | ID=cds.MS.gene005307.t1;Parent=MS.gene005307.t1 |
| chr1.1 | exon | 62210578 | 62210645 | 62210578 | ID=MS.gene005307.t1.exon10;Parent=MS.gene005307.t1 |
| chr1.1 | CDS | 62210578 | 62210645 | 62210578 | ID=cds.MS.gene005307.t1;Parent=MS.gene005307.t1 |
| chr1.1 | exon | 62210395 | 62210490 | 62210395 | ID=MS.gene005307.t1.exon11;Parent=MS.gene005307.t1 |
| chr1.1 | CDS | 62210395 | 62210490 | 62210395 | ID=cds.MS.gene005307.t1;Parent=MS.gene005307.t1 |
| chr1.1 | exon | 62210257 | 62210304 | 62210257 | ID=MS.gene005307.t1.exon12;Parent=MS.gene005307.t1 |
| chr1.1 | CDS | 62210257 | 62210304 | 62210257 | ID=cds.MS.gene005307.t1;Parent=MS.gene005307.t1 |
| chr1.1 | exon | 62210008 | 62210148 | 62210008 | ID=MS.gene005307.t1.exon13;Parent=MS.gene005307.t1 |
| chr1.1 | CDS | 62210008 | 62210148 | 62210008 | ID=cds.MS.gene005307.t1;Parent=MS.gene005307.t1 |
| chr1.1 | exon | 62209907 | 62209918 | 62209907 | ID=MS.gene005307.t1.exon14;Parent=MS.gene005307.t1 |
| chr1.1 | CDS | 62209907 | 62209918 | 62209907 | ID=cds.MS.gene005307.t1;Parent=MS.gene005307.t1 |
| Gene Sequence |
| Protein sequence |
