AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene004358

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene004358.t1 MTR_2g018290 97.196 535 12 3 1 534 1 533 0.0 1056
MS.gene004358.t1 MTR_7g108420 73.770 427 89 3 113 534 1 409 0.0 625
MS.gene004358.t1 MTR_5g030950 57.084 487 187 3 55 533 36 508 0.0 573
MS.gene004358.t1 MTR_5g067060 58.772 456 175 3 88 533 45 497 0.0 563
MS.gene004358.t1 MTR_3g084310 59.389 458 166 6 88 533 12 461 0.0 546
MS.gene004358.t1 MTR_8g081510 57.642 458 174 5 88 533 12 461 0.0 537
MS.gene004358.t1 MTR_2g006570 51.820 467 204 5 82 533 130 590 1.23e-166 485
MS.gene004358.t1 MTR_3g084310 63.533 351 114 3 88 426 12 360 2.86e-160 460
MS.gene004358.t1 MTR_3g073470 48.866 485 215 7 70 533 102 574 3.10e-158 463
MS.gene004358.t1 MTR_2g006570 51.059 425 187 5 124 533 1 419 2.30e-149 435
MS.gene004358.t1 MTR_1g073580 48.475 295 83 7 232 526 1 226 3.70e-70 225
MS.gene004358.t1 MTR_3g062030 86.957 92 8 1 328 419 1 88 7.51e-46 161
MS.gene004358.t1 MTR_7g070020 86.301 73 3 1 402 467 1 73 4.62e-32 119
MS.gene004358.t1 MTR_1g070415 64.045 89 32 0 438 526 23 111 1.95e-31 118
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene004358.t1 AT4G32520 73.519 540 121 6 4 534 3 529 0.0 798
MS.gene004358.t1 AT4G32520 73.519 540 121 6 4 534 3 529 0.0 798
MS.gene004358.t1 AT4G37930 59.477 459 175 3 84 533 51 507 0.0 578
MS.gene004358.t1 AT5G26780 59.607 458 176 2 84 533 51 507 0.0 571
MS.gene004358.t1 AT5G26780 59.607 458 176 2 84 533 51 507 0.0 571
MS.gene004358.t1 AT5G26780 57.595 474 176 3 84 533 51 523 0.0 560
MS.gene004358.t1 AT5G26780 57.595 474 176 3 84 533 51 523 0.0 560
MS.gene004358.t1 AT4G13930 58.065 465 175 5 81 533 5 461 0.0 542
MS.gene004358.t1 AT4G13890 54.957 464 189 6 80 533 8 461 0.0 523
MS.gene004358.t1 AT4G13890 60.052 388 141 4 80 457 8 391 5.67e-170 486
MS.gene004358.t1 AT1G22020 51.410 461 203 3 88 533 142 596 8.04e-167 486
MS.gene004358.t1 AT1G22020 51.410 461 203 3 88 533 142 596 8.04e-167 486
MS.gene004358.t1 AT1G36370 50.873 458 204 4 91 533 141 592 1.79e-159 467

Find 128 sgRNAs with CRISPR-Local

Find 280 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGAAATGAAGTTGAGGTAAA+AGG 0.187522 2.4:-67751009 None:intergenic
CATTTACATGTAAGGTATTA+TGG 0.211657 2.4:+67752314 MS.gene004358:intron
TCTCTTCATGAAGCAACTTT+TGG 0.244672 2.4:+67751067 MS.gene004358:CDS
CATGGATATAAACTGGTTTC+TGG 0.273004 2.4:+67753791 MS.gene004358:CDS
TGTTCCTGAGACCAAACTTT+TGG 0.281834 2.4:-67754640 None:intergenic
CGGAAGGTTTGCCGGGTAAA+AGG 0.292672 2.4:+67752200 MS.gene004358:CDS
GGATCTAGCTTCTTGGACTA+TGG 0.313167 2.4:+67752031 MS.gene004358:CDS
AGTCCTCTTGTTGTCATTGC+TGG 0.320405 2.4:-67754552 None:intergenic
GTAAATGTTCAACCATTATC+TGG 0.330824 2.4:+67752422 MS.gene004358:CDS
GTTAGCTCCTGAATTTCCTT+TGG 0.331098 2.4:+67754689 MS.gene004358:CDS
GACAAGAGTGCCCTGGTTCC+CGG 0.331923 2.4:+67754510 MS.gene004358:CDS
TTGTCTCCCAAAGGAAATTC+AGG 0.356751 2.4:-67754696 None:intergenic
TTAGCTCCTGAATTTCCTTT+GGG 0.358906 2.4:+67754690 MS.gene004358:CDS
CATGTCCTTTAGGGTATTGA+TGG 0.361577 2.4:+67754068 MS.gene004358:intron
GACATCACTATACCTGGTTT+TGG 0.362836 2.4:-67753652 None:intergenic
CAGGGTTTGGATTTGCCTCA+TGG 0.367504 2.4:+67752587 MS.gene004358:intron
CAGGTACTCGGAAGGTTTGC+CGG 0.379231 2.4:+67752192 MS.gene004358:CDS
CGACCAAAACTCATTATTGC+TGG 0.387419 2.4:+67752853 MS.gene004358:CDS
TTGGCTGCATTTCATCTAGA+TGG 0.389212 2.4:+67752386 MS.gene004358:CDS
AGTTGAGCATGGATATAAAC+TGG 0.395755 2.4:+67753784 MS.gene004358:CDS
GCACCAGCAATAATGAGTTT+TGG 0.396589 2.4:-67752856 None:intergenic
TTCATGAAGAGATACTTTGC+AGG 0.398932 2.4:-67751056 None:intergenic
TTAATTATGGCATGAACATC+AGG 0.399990 2.4:-67752070 None:intergenic
TAAGATTAGACTCCGGGAAT+AGG 0.400101 2.4:-67754765 None:intergenic
AAGTCTTGAAGCCAAAAGTT+TGG 0.403698 2.4:+67754629 MS.gene004358:CDS
ACAGCTAAAAGACGTGTATC+AGG 0.403874 2.4:+67752635 MS.gene004358:CDS
GAAATGAAGTTGAGGTAAAA+GGG 0.405484 2.4:-67751008 None:intergenic
AGTAGGTGCGTTTCTGATGA+TGG 0.415251 2.4:+67753048 MS.gene004358:CDS
TAAACCACATGATCGTATAA+TGG 0.415625 2.4:+67752481 MS.gene004358:CDS
GACAGAAGAAGGAGGAGAAG+AGG 0.418116 2.4:-67751107 None:intergenic
TGCGGATGCCTCCGGGAACC+AGG 0.419322 2.4:-67754521 None:intergenic
TGAACCGATGCGGATGCCTC+CGG 0.423228 2.4:-67754529 None:intergenic
TATATCCATGCTCAACTAAC+CGG 0.429922 2.4:-67753778 None:intergenic
AGGGTTTGGATTTGCCTCAT+GGG 0.431845 2.4:+67752588 MS.gene004358:intron
GCTACTCAGTATCCTATTCC+CGG 0.433881 2.4:+67754753 MS.gene004358:CDS
TGCTGTGCATGGAGTTGATC+TGG 0.443884 2.4:+67753369 MS.gene004358:CDS
CCTCCAATTGTATGGTTATG+AGG 0.444453 2.4:-67753581 None:intergenic
TTGGTTCATGCCTCACAAAC+AGG 0.446380 2.4:+67752173 MS.gene004358:CDS
GCAACTCCGCTGCACGCCGC+AGG 0.450772 2.4:-67750917 None:intergenic
GTTCAAGACTTCTGAATTGA+CGG 0.454529 2.4:-67752105 None:intergenic
AAGCTTCATAATTTCTCTCA+TGG 0.457747 2.4:+67750983 MS.gene004358:CDS
GGGTTTGGATTTGCCTCATG+GGG 0.466783 2.4:+67752589 MS.gene004358:intron
ACTGTAGAGCTCTTGCTAAC+CGG 0.468226 2.4:+67753759 MS.gene004358:CDS
TGCCATAATTAACAAGGAAA+AGG 0.471108 2.4:+67752081 MS.gene004358:CDS
GAAGCCAAAAGTTTGGTCTC+AGG 0.473679 2.4:+67754636 MS.gene004358:CDS
CTGCTAGTCCTCCAATTGTA+TGG 0.473680 2.4:-67753589 None:intergenic
AGGTGATGGATCTAGCTTCT+TGG 0.473982 2.4:+67752024 MS.gene004358:intron
AGCAAGTAAGATTAGACTCC+GGG 0.474277 2.4:-67754771 None:intergenic
TTAGCCGGGGAACCAGATAA+TGG 0.480349 2.4:-67752434 None:intergenic
ATGCAGCCAATGCCCTTTGT+TGG 0.480401 2.4:-67752373 None:intergenic
AGGCACTGAATTCTTGTTGA+GGG 0.480460 2.4:-67754129 None:intergenic
ATGAGAGAAATTATGAAGCT+TGG 0.481447 2.4:-67750981 None:intergenic
AAGGCAAACCTTGTGGGTTG+TGG 0.484488 2.4:-67753146 None:intergenic
GTGTATGCTGCAAAATTAGC+CGG 0.484634 2.4:-67752449 None:intergenic
GGTCCTCATAACCATACAAT+TGG 0.485363 2.4:+67753578 MS.gene004358:CDS
ATGGATATGGCTCACGTAAG+TGG 0.485774 2.4:+67753067 MS.gene004358:CDS
GAGACAAGGTTTCAAATTTG+CGG 0.487306 2.4:+67754712 MS.gene004358:CDS
CACAATATCAACAAACTCAA+AGG 0.487808 2.4:-67753119 None:intergenic
TGTTATTGATTATGATATGT+TGG 0.493518 2.4:+67752810 MS.gene004358:CDS
TATCTCAAGGCAAACCTTGT+GGG 0.496905 2.4:-67753152 None:intergenic
AGGTACTCGGAAGGTTTGCC+GGG 0.499896 2.4:+67752193 MS.gene004358:CDS
TGCGTTTCTGATGATGGATA+TGG 0.504349 2.4:+67753054 MS.gene004358:CDS
GAACCGATGCGGATGCCTCC+GGG 0.516515 2.4:-67754528 None:intergenic
TGAATTTCCTTTGGGAGACA+AGG 0.521416 2.4:+67754698 MS.gene004358:CDS
GTGGATTCATCAAGTCGATA+AGG 0.522073 2.4:-67752683 None:intergenic
CCAATGCCCTTTGTTGGCAT+AGG 0.522830 2.4:-67752367 None:intergenic
ACAATATCAACAAACTCAAA+GGG 0.525909 2.4:-67753118 None:intergenic
TCCAAATTTACCTGTAGACC+AGG 0.526112 2.4:-67753418 None:intergenic
CGAAATCCTATGCCAACAAA+GGG 0.528808 2.4:+67752361 MS.gene004358:CDS
ACGATGCCTGCGGCGTGCAG+CGG 0.533992 2.4:+67750911 None:intergenic
GACTTCCTCCAGTCTTTGAG+AGG 0.535766 2.4:+67753313 MS.gene004358:intron
CCTCATAACCATACAATTGG+AGG 0.537010 2.4:+67753581 MS.gene004358:CDS
TCAACCATTATCTGGTTCCC+CGG 0.537768 2.4:+67752430 MS.gene004358:CDS
ACCTGGTTCTTGTTGATCTG+AGG 0.546425 2.4:+67753828 MS.gene004358:CDS
TGGATATGGCTCACGTAAGT+GGG 0.546881 2.4:+67753068 MS.gene004358:CDS
TCATGAAGAGATACTTTGCA+GGG 0.549031 2.4:-67751055 None:intergenic
TCGAAATCCTATGCCAACAA+AGG 0.549476 2.4:+67752360 MS.gene004358:CDS
TGTATGCTGCAAAATTAGCC+GGG 0.549629 2.4:-67752448 None:intergenic
AGCGGAGTTGCATCGATGAT+AGG 0.550719 2.4:+67750929 MS.gene004358:CDS
AAGAATATCATACCACCTCT+AGG 0.550750 2.4:-67753337 None:intergenic
CTCAACAAGAATTCAGTGCC+TGG 0.552025 2.4:+67754131 MS.gene004358:CDS
CAGGCACTGAATTCTTGTTG+AGG 0.558355 2.4:-67754130 None:intergenic
TTCATCAAGTCGATAAGGCA+TGG 0.561368 2.4:-67752678 None:intergenic
GCGGATGCCTCCGGGAACCA+GGG 0.563617 2.4:-67754520 None:intergenic
TTCAAGAAAGATGCTGTGCA+TGG 0.563986 2.4:+67753358 MS.gene004358:CDS
CCTATGCCAACAAAGGGCAT+TGG 0.576114 2.4:+67752367 MS.gene004358:CDS
GCAATGACAACAAGAGGACT+TGG 0.577675 2.4:+67754555 MS.gene004358:CDS
GTTCCCGGAGGCATCCGCAT+CGG 0.582687 2.4:+67754525 MS.gene004358:CDS
ATGCCTCACAAACAGGTACT+CGG 0.582902 2.4:+67752180 MS.gene004358:CDS
TGAAGCTTGGTCGAAGAAAG+AGG 0.582937 2.4:-67750968 None:intergenic
TCATCTAGATGGTAACAAGT+GGG 0.583625 2.4:+67752397 MS.gene004358:CDS
TGAAAGATTGCAGATTCAGT+AGG 0.585640 2.4:+67753031 MS.gene004358:intron
GCTAACCGGTTAGTTGAGCA+TGG 0.590724 2.4:+67753773 MS.gene004358:CDS
TGGCGGTAGTGATAATCACC+TGG 0.591392 2.4:+67753811 MS.gene004358:CDS
TTTACCATTATACGATCATG+TGG 0.592593 2.4:-67752485 None:intergenic
TTTGAAACCTTGTCTCCCAA+AGG 0.595328 2.4:-67754705 None:intergenic
GCAAACCTTGTGGGTTGTGG+TGG 0.598562 2.4:-67753143 None:intergenic
AAGTTTGGTCTCAGGAACAA+AGG 0.601314 2.4:+67754644 MS.gene004358:CDS
GGGTATTGATGGTGCTCGTG+TGG 0.604786 2.4:+67754079 MS.gene004358:intron
TATCGACTTGATGAATCCAC+AGG 0.605117 2.4:+67752686 MS.gene004358:CDS
AATTGCAGACTTAATTCATG+AGG 0.606222 2.4:+67754596 MS.gene004358:CDS
TCACCAGCAATGACAACAAG+AGG 0.607582 2.4:+67754549 MS.gene004358:CDS
CTTCCGAGTACCTGTTTGTG+AGG 0.608482 2.4:-67752183 None:intergenic
TTCATCTAGATGGTAACAAG+TGG 0.609676 2.4:+67752396 MS.gene004358:CDS
AAGCAAGTAAGATTAGACTC+CGG 0.610878 2.4:-67754772 None:intergenic
GCCTCAGATCAACAAGAACC+AGG 0.611769 2.4:-67753829 None:intergenic
TGTGGAGAAAATTCTTGACA+TGG 0.613472 2.4:+67754097 MS.gene004358:CDS
AAAAGGTGACAAGAGTGCCC+TGG 0.613809 2.4:+67754503 MS.gene004358:intron
TGTTCATGCCATAATTAACA+AGG 0.614939 2.4:+67752075 MS.gene004358:CDS
GGTTTGGATTTGCCTCATGG+GGG 0.619577 2.4:+67752590 MS.gene004358:CDS
CAGTCTTTGAGAGGTCCTAG+AGG 0.623014 2.4:+67753322 MS.gene004358:intron
ATTGCAGACTTAATTCATGA+GGG 0.631195 2.4:+67754597 MS.gene004358:CDS
ACAAGGTTTCAAATTTGCGG+AGG 0.637013 2.4:+67754715 MS.gene004358:CDS
AAGGCAGTGATGGAAGCAGT+TGG 0.639750 2.4:+67752154 MS.gene004358:CDS
AATGTCTCGAGGATAAGCAC+TGG 0.642731 2.4:-67752878 None:intergenic
CATCTAGATGGTAACAAGTG+GGG 0.651752 2.4:+67752398 MS.gene004358:CDS
TGTGACCACCACAACCCACA+AGG 0.658566 2.4:+67753138 MS.gene004358:CDS
TTACATGTAAGGTATTATGG+TGG 0.660596 2.4:+67752317 MS.gene004358:intron
TTATTGTTGAAATGAAGTTG+AGG 0.668224 2.4:-67751016 None:intergenic
CTCACAAACAGGTACTCGGA+AGG 0.671763 2.4:+67752184 MS.gene004358:CDS
CGGGCATAATCAATGTCTCG+AGG 0.674256 2.4:-67752889 None:intergenic
TCTTTGAGAGGTCCTAGAGG+TGG 0.677857 2.4:+67753325 MS.gene004358:CDS
GGATATAAACTGGTTTCTGG+CGG 0.678188 2.4:+67753794 MS.gene004358:CDS
GTATGCTGCAAAATTAGCCG+GGG 0.694478 2.4:-67752447 None:intergenic
CTAATCCATAACGATGCCTG+CGG 0.695014 2.4:+67750901 None:intergenic
AAGAGTGCCCTGGTTCCCGG+AGG 0.704318 2.4:+67754513 MS.gene004358:CDS
TCATTGCTGGTGAACCGATG+CGG 0.745962 2.4:-67754539 None:intergenic
AGCTTGGTCGAAGAAAGAGG+TGG 0.764797 2.4:-67750965 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATGCATATATATTTAAATTT+CGG - chr2.4:67751956-67751975 None:intergenic 10.0%
!! TTAAAAAAAAGAAATTGAAT+GGG - chr2.4:67754354-67754373 None:intergenic 10.0%
!! TTTAAAAAAAAGAAATTGAA+TGG - chr2.4:67754355-67754374 None:intergenic 10.0%
!!! ACTTATTTTTAAAAATTCTT+CGG - chr2.4:67751655-67751674 None:intergenic 10.0%
!!! ATCACTTTTTTTTTTATAAT+TGG + chr2.4:67751611-67751630 MS.gene004358:intron 10.0%
!! AAAAACAACTTATAACTTAT+CGG - chr2.4:67751516-67751535 None:intergenic 15.0%
!! AATAGAATCAAAAAATGAAA+TGG - chr2.4:67751170-67751189 None:intergenic 15.0%
!!! CGTTATTTCTAAAAAAATTT+GGG - chr2.4:67753919-67753938 None:intergenic 15.0%
!!! GTTATTTCTAAAAAAATTTG+GGG - chr2.4:67753918-67753937 None:intergenic 15.0%
!!! TCGTTATTTCTAAAAAAATT+TGG - chr2.4:67753920-67753939 None:intergenic 15.0%
!!! TTTTTTTAACTCTCTAAAAT+TGG - chr2.4:67754410-67754429 None:intergenic 15.0%
!! ATAATACCTTACATGTAAAT+GGG - chr2.4:67752315-67752334 None:intergenic 20.0%
!! ATATAATGATAATTCTGTCT+TGG + chr2.4:67753884-67753903 MS.gene004358:intron 20.0%
!! CATTTCTATCAAAAAGAAAA+AGG - chr2.4:67754217-67754236 None:intergenic 20.0%
!! CTATATTAAAATCACAAACT+AGG - chr2.4:67753540-67753559 None:intergenic 20.0%
!! GTTAAAAAAGAACTAATTAG+AGG - chr2.4:67753448-67753467 None:intergenic 20.0%
!! TAAAATCGTTTCAGATATAT+TGG + chr2.4:67752726-67752745 MS.gene004358:intron 20.0%
!! TGTATAACAGTCTTTAAATT+CGG + chr2.4:67751339-67751358 MS.gene004358:intron 20.0%
!! TTTAAATATATATGCATGCT+TGG + chr2.4:67751959-67751978 MS.gene004358:intron 20.0%
!!! AATAAGTTGAAATCAACTTA+TGG + chr2.4:67751668-67751687 MS.gene004358:intron 20.0%
!!! ATATATCTGAAACGATTTTA+AGG - chr2.4:67752726-67752745 None:intergenic 20.0%
!!! ATTTTTACTTCTCTAGAAAT+GGG + chr2.4:67752236-67752255 MS.gene004358:intron 20.0%
!!! GAGTTTGCTTTTTTTTTTTT+TGG + chr2.4:67753218-67753237 MS.gene004358:intron 20.0%
!!! TAGTTCTTTTTTAACTATTC+TGG + chr2.4:67753453-67753472 MS.gene004358:intron 20.0%
!!! TATTTTTACTTCTCTAGAAA+TGG + chr2.4:67752235-67752254 MS.gene004358:intron 20.0%
!!! TGTTATTGATTATGATATGT+TGG + chr2.4:67752810-67752829 MS.gene004358:CDS 20.0%
!!! TGTTTGTTGCATATAATTTA+GGG + chr2.4:67754166-67754185 MS.gene004358:intron 20.0%
!!! TTTCTTTTTGATAGAAATGA+GGG + chr2.4:67754218-67754237 MS.gene004358:intron 20.0%
!!! TTTTAAAAATTACCAAAACC+AGG + chr2.4:67753640-67753659 MS.gene004358:CDS 20.0%
!!! TTTTCTTTTTGATAGAAATG+AGG + chr2.4:67754217-67754236 MS.gene004358:intron 20.0%
! AAATAAGCAAAAATGCTAAG+CGG - chr2.4:67754449-67754468 None:intergenic 25.0%
! AAGAAAACACAAATATCTCA+AGG - chr2.4:67753168-67753187 None:intergenic 25.0%
! ACAATATCAACAAACTCAAA+GGG - chr2.4:67753121-67753140 None:intergenic 25.0%
! ATGTAATTAGCTATTTGTGA+AGG - chr2.4:67752998-67753017 None:intergenic 25.0%
! ATTAAAATCACAAACTAGGA+AGG - chr2.4:67753536-67753555 None:intergenic 25.0%
! CATAATACCTTACATGTAAA+TGG - chr2.4:67752316-67752335 None:intergenic 25.0%
! CATGTGCTAATTATTACAAA+AGG + chr2.4:67754486-67754505 MS.gene004358:intron 25.0%
! TTATTGTTGAAATGAAGTTG+AGG - chr2.4:67751019-67751038 None:intergenic 25.0%
! TTTACTTGAAGTTATGAAGT+CGG + chr2.4:67753259-67753278 MS.gene004358:intron 25.0%
!! AATATAGTGAAGAATTTTCC+AGG + chr2.4:67753553-67753572 MS.gene004358:intron 25.0%
!! ATAAGAATTTACCTTTTACC+CGG - chr2.4:67752214-67752233 None:intergenic 25.0%
!! ATATAGTGAAGAATTTTCCA+GGG + chr2.4:67753554-67753573 MS.gene004358:intron 25.0%
!! ATTAAGTTGTTTATCCAAAC+AGG - chr2.4:67751396-67751415 None:intergenic 25.0%
!! CATTTACATGTAAGGTATTA+TGG + chr2.4:67752314-67752333 MS.gene004358:intron 25.0%
!! CTGTTTGTTGCATATAATTT+AGG + chr2.4:67754165-67754184 MS.gene004358:intron 25.0%
!! TCTTTCTTTTCAATTTTGAG+TGG - chr2.4:67753200-67753219 None:intergenic 25.0%
!! TTAAGTTGTTTATCCAAACA+GGG - chr2.4:67751395-67751414 None:intergenic 25.0%
!! TTTCTAAAAAAATTTGGGGA+CGG - chr2.4:67753914-67753933 None:intergenic 25.0%
!! TTTTTCACATTGTCATACTT+GGG - chr2.4:67751794-67751813 None:intergenic 25.0%
!!! AATGTGCTATTTCAAATATC+AGG + chr2.4:67752004-67752023 MS.gene004358:intron 25.0%
!!! AATTTACCTCCAATTTTTTG+AGG - chr2.4:67751133-67751152 None:intergenic 25.0%
!!! ATTTACCTCCAATTTTTTGA+GGG - chr2.4:67751132-67751151 None:intergenic 25.0%
!!! GTATTTTTTTTCATCTCCTT+TGG + chr2.4:67751855-67751874 MS.gene004358:intron 25.0%
!!! TTCTGAGAATTTTACATCTA+AGG + chr2.4:67752135-67752154 MS.gene004358:CDS 25.0%
AACTCTAACCAATGATGAAA+AGG - chr2.4:67753678-67753697 None:intergenic 30.0%
AAGCTTCATAATTTCTCTCA+TGG + chr2.4:67750983-67751002 MS.gene004358:CDS 30.0%
AATAAGCAAAAATGCTAAGC+GGG - chr2.4:67754448-67754467 None:intergenic 30.0%
AATCAACAAATTTGCAGAAG+AGG - chr2.4:67752288-67752307 None:intergenic 30.0%
AATTGCAGACTTAATTCATG+AGG + chr2.4:67754596-67754615 MS.gene004358:CDS 30.0%
ACAACTTATAACTTATCGGA+AGG - chr2.4:67751512-67751531 None:intergenic 30.0%
ACTCTAACCAATGATGAAAA+GGG - chr2.4:67753677-67753696 None:intergenic 30.0%
AGGAAAAACAGCATTGTTAA+TGG - chr2.4:67753401-67753420 None:intergenic 30.0%
ATAAATGCATCTGACTCAAT+AGG - chr2.4:67753505-67753524 None:intergenic 30.0%
ATCAACAAATTTGCAGAAGA+GGG - chr2.4:67752287-67752306 None:intergenic 30.0%
ATGAGAGAAATTATGAAGCT+TGG - chr2.4:67750984-67751003 None:intergenic 30.0%
ATGTGTAATGATATGTTACC+AGG + chr2.4:67752568-67752587 MS.gene004358:intron 30.0%
ATTGCAGACTTAATTCATGA+GGG + chr2.4:67754597-67754616 MS.gene004358:CDS 30.0%
ATTGTTAGACACTGTAACAA+AGG - chr2.4:67751211-67751230 None:intergenic 30.0%
CACAATATCAACAAACTCAA+AGG - chr2.4:67753122-67753141 None:intergenic 30.0%
CTATTTCAAATATCAGGTGA+TGG + chr2.4:67752010-67752029 MS.gene004358:intron 30.0%
CTTGTAAATTTGTCATAAGC+TGG + chr2.4:67751692-67751711 MS.gene004358:intron 30.0%
GAAATGAAGTTGAGGTAAAA+GGG - chr2.4:67751011-67751030 None:intergenic 30.0%
GCTTATTTGTGGAATAACTT+GGG + chr2.4:67752748-67752767 MS.gene004358:intron 30.0%
GTAAATGTTCAACCATTATC+TGG + chr2.4:67752422-67752441 MS.gene004358:CDS 30.0%
TAAACCACATGATCGTATAA+TGG + chr2.4:67752481-67752500 MS.gene004358:CDS 30.0%
TCAAATAAGTCGATCAAAAC+AGG + chr2.4:67751767-67751786 MS.gene004358:intron 30.0%
TCAGATATATATTGACACGA+TGG - chr2.4:67751916-67751935 None:intergenic 30.0%
TGAAATGAAGTTGAGGTAAA+AGG - chr2.4:67751012-67751031 None:intergenic 30.0%
TGCCATAATTAACAAGGAAA+AGG + chr2.4:67752081-67752100 MS.gene004358:CDS 30.0%
TGTGTAATGATATGTTACCA+GGG + chr2.4:67752569-67752588 MS.gene004358:intron 30.0%
TGTTACAGTGTCTAACAATT+AGG + chr2.4:67751212-67751231 MS.gene004358:intron 30.0%
TGTTCATGCCATAATTAACA+AGG + chr2.4:67752075-67752094 MS.gene004358:CDS 30.0%
TTAATTATGGCATGAACATC+AGG - chr2.4:67752073-67752092 None:intergenic 30.0%
TTCACATATCATGTCCTTTA+GGG + chr2.4:67754059-67754078 MS.gene004358:intron 30.0%
TTGTTAGACACTGTAACAAA+GGG - chr2.4:67751210-67751229 None:intergenic 30.0%
TTTACCATTATACGATCATG+TGG - chr2.4:67752488-67752507 None:intergenic 30.0%
TTTCACATATCATGTCCTTT+AGG + chr2.4:67754058-67754077 MS.gene004358:intron 30.0%
! ATCAAAATCGACTTCCAATT+TGG - chr2.4:67752541-67752560 None:intergenic 30.0%
! GTCCTTTTCCTTGTTAATTA+TGG - chr2.4:67752086-67752105 None:intergenic 30.0%
! GTTTTTCACATTGTCATACT+TGG - chr2.4:67751795-67751814 None:intergenic 30.0%
! TATAGTGAAGAATTTTCCAG+GGG + chr2.4:67753555-67753574 MS.gene004358:intron 30.0%
! TTACATGTAAGGTATTATGG+TGG + chr2.4:67752317-67752336 MS.gene004358:intron 30.0%
! TTCTAAAAAAATTTGGGGAC+GGG - chr2.4:67753913-67753932 None:intergenic 30.0%
! TTTTCACATTGTCATACTTG+GGG - chr2.4:67751793-67751812 None:intergenic 30.0%
!! AAACTATTTTTCTCACACGT+TGG + chr2.4:67752505-67752524 MS.gene004358:intron 30.0%
!! ATTTTACTCAAAGCACTTCT+GGG + chr2.4:67751820-67751839 MS.gene004358:intron 30.0%
!! CAGAACATACTTTTCTAAAG+CGG - chr2.4:67752912-67752931 None:intergenic 30.0%
!! CAGATATATTGGCTTATTTG+TGG + chr2.4:67752737-67752756 MS.gene004358:intron 30.0%
!! CATATAATTTAGGGAGTGTT+TGG + chr2.4:67754175-67754194 MS.gene004358:intron 30.0%
!! TATTTTACTCAAAGCACTTC+TGG + chr2.4:67751819-67751838 MS.gene004358:intron 30.0%
!! TCTTCTGCAAATTTGTTGAT+TGG + chr2.4:67752287-67752306 MS.gene004358:intron 30.0%
!!! AGAACATACTTTTCTAAAGC+GGG - chr2.4:67752911-67752930 None:intergenic 30.0%
!!! ATTAACAATGCTGTTTTTCC+TGG + chr2.4:67753400-67753419 MS.gene004358:CDS 30.0%
!!! CGTGTTTTTAGTGTGAAAAT+AGG + chr2.4:67753985-67754004 MS.gene004358:intron 30.0%
!!! TAGTAATTTTTTGCCCTGTT+TGG + chr2.4:67751379-67751398 MS.gene004358:intron 30.0%
!!! TTTTTTTCTTTCACCCACTT+TGG + chr2.4:67752775-67752794 MS.gene004358:intron 30.0%
AAGAATATCATACCACCTCT+AGG - chr2.4:67753340-67753359 None:intergenic 35.0%
AAGTCTTGAAGCCAAAAGTT+TGG + chr2.4:67754629-67754648 MS.gene004358:CDS 35.0%
AATGATATGTTACCAGGGTT+TGG + chr2.4:67752574-67752593 MS.gene004358:intron 35.0%
AGTTGAGCATGGATATAAAC+TGG + chr2.4:67753784-67753803 MS.gene004358:CDS 35.0%
ATAATGACACTTGACACCAA+AGG - chr2.4:67751874-67751893 None:intergenic 35.0%
ATCTGACTCAATAGGTACAT+AGG - chr2.4:67753497-67753516 None:intergenic 35.0%
ATTTGCAGAAGAGGGAAAAA+AGG - chr2.4:67752279-67752298 None:intergenic 35.0%
GAGACAAGGTTTCAAATTTG+CGG + chr2.4:67754712-67754731 MS.gene004358:CDS 35.0%
GGCTTATTTGTGGAATAACT+TGG + chr2.4:67752747-67752766 MS.gene004358:intron 35.0%
GTTCAAGACTTCTGAATTGA+CGG - chr2.4:67752108-67752127 None:intergenic 35.0%
TATATCCATGCTCAACTAAC+CGG - chr2.4:67753781-67753800 None:intergenic 35.0%
TATGTGAAATACAGTCAGTC+AGG - chr2.4:67754047-67754066 None:intergenic 35.0%
TCATCTAGATGGTAACAAGT+GGG + chr2.4:67752397-67752416 MS.gene004358:CDS 35.0%
TCATGAAGAGATACTTTGCA+GGG - chr2.4:67751058-67751077 None:intergenic 35.0%
TCTTCTGTCCCTCAAAAAAT+TGG + chr2.4:67751121-67751140 MS.gene004358:CDS 35.0%
TGAAAGATTGCAGATTCAGT+AGG + chr2.4:67753031-67753050 MS.gene004358:intron 35.0%
TGTAGTGCTATGTAAATTGC+TGG + chr2.4:67753962-67753981 MS.gene004358:intron 35.0%
TGTGGAGAAAATTCTTGACA+TGG + chr2.4:67754097-67754116 MS.gene004358:CDS 35.0%
TTAGCTCCTGAATTTCCTTT+GGG + chr2.4:67754690-67754709 MS.gene004358:CDS 35.0%
TTCATCTAGATGGTAACAAG+TGG + chr2.4:67752396-67752415 MS.gene004358:CDS 35.0%
TTCATGAAGAGATACTTTGC+AGG - chr2.4:67751059-67751078 None:intergenic 35.0%
TTGGATCCCATTTACATGTA+AGG + chr2.4:67752306-67752325 MS.gene004358:intron 35.0%
! ACCTGTTTTCATTCCAAAGT+GGG - chr2.4:67752791-67752810 None:intergenic 35.0%
! ATAGTGAAGAATTTTCCAGG+GGG + chr2.4:67753556-67753575 MS.gene004358:intron 35.0%
! ATGGGAATCTAAAATTCCCA+TGG - chr2.4:67754336-67754355 None:intergenic 35.0%
! CATGGATATAAACTGGTTTC+TGG + chr2.4:67753791-67753810 MS.gene004358:CDS 35.0%
! CTCTTCATGAAGCAACTTTT+GGG + chr2.4:67751068-67751087 MS.gene004358:CDS 35.0%
! TCTCTTCATGAAGCAACTTT+TGG + chr2.4:67751067-67751086 MS.gene004358:CDS 35.0%
! TTGGTGATCTTTCTTGTTCA+TGG + chr2.4:67751978-67751997 MS.gene004358:intron 35.0%
!! CAGCAATAATGAGTTTTGGT+CGG - chr2.4:67752855-67752874 None:intergenic 35.0%
!! TTCAAGTTTTTCACCTCCAT+GGG + chr2.4:67754317-67754336 MS.gene004358:intron 35.0%
!! TTTTACATCTAAGGCAGTGA+TGG + chr2.4:67752144-67752163 MS.gene004358:CDS 35.0%
!!! ATTTTTTGAGGGACAGAAGA+AGG - chr2.4:67751121-67751140 None:intergenic 35.0%
!!! TGGAGTCATTTTTCATTCAC+AGG + chr2.4:67754254-67754273 MS.gene004358:intron 35.0%
!!! TTTCAAGTTTTTCACCTCCA+TGG + chr2.4:67754316-67754335 MS.gene004358:intron 35.0%
AAAAATGCTAAGCGGGTGTT+TGG - chr2.4:67754441-67754460 None:intergenic 40.0%
AAAAGGGACATCACTATACC+TGG - chr2.4:67753661-67753680 None:intergenic 40.0%
AAGAGCAACAAGCTTACTGA+TGG - chr2.4:67753854-67753873 None:intergenic 40.0%
AAGTTTGGTCTCAGGAACAA+AGG + chr2.4:67754644-67754663 MS.gene004358:CDS 40.0%
ACAAGGTTTCAAATTTGCGG+AGG + chr2.4:67754715-67754734 MS.gene004358:CDS 40.0%
ACAGCTAAAAGACGTGTATC+AGG + chr2.4:67752635-67752654 MS.gene004358:CDS 40.0%
ACAGTCAGTCAGGTACTAAA+AGG - chr2.4:67754037-67754056 None:intergenic 40.0%
ATATCTCAAGGCAAACCTTG+TGG - chr2.4:67753156-67753175 None:intergenic 40.0%
ATCTGCTTCTCTACATCGTA+TGG + chr2.4:67752966-67752985 MS.gene004358:intron 40.0%
ATGAAAAATGACTCCACACC+AGG - chr2.4:67754250-67754269 None:intergenic 40.0%
ATGTTTCCTAGGAATGCAAG+GGG + chr2.4:67754281-67754300 MS.gene004358:intron 40.0%
CATCTAGATGGTAACAAGTG+GGG + chr2.4:67752398-67752417 MS.gene004358:CDS 40.0%
CATGTTTCCTAGGAATGCAA+GGG + chr2.4:67754280-67754299 MS.gene004358:intron 40.0%
CCTCATAACCATACAATTGG+AGG + chr2.4:67753581-67753600 MS.gene004358:CDS 40.0%
CCTCCAATTGTATGGTTATG+AGG - chr2.4:67753584-67753603 None:intergenic 40.0%
CGAAATCCTATGCCAACAAA+GGG + chr2.4:67752361-67752380 MS.gene004358:CDS 40.0%
CGACCAAAACTCATTATTGC+TGG + chr2.4:67752853-67752872 MS.gene004358:CDS 40.0%
GGACAAAATATAAGCACCTG+TGG - chr2.4:67752705-67752724 None:intergenic 40.0%
GGTCCTCATAACCATACAAT+TGG + chr2.4:67753578-67753597 MS.gene004358:CDS 40.0%
GTGGATTCATCAAGTCGATA+AGG - chr2.4:67752686-67752705 None:intergenic 40.0%
GTGTATGCTGCAAAATTAGC+CGG - chr2.4:67752452-67752471 None:intergenic 40.0%
GTTAGCTCCTGAATTTCCTT+TGG + chr2.4:67754689-67754708 MS.gene004358:CDS 40.0%
TATCTCAAGGCAAACCTTGT+GGG - chr2.4:67753155-67753174 None:intergenic 40.0%
TCACAGGAATCATGTTTCCT+AGG + chr2.4:67754270-67754289 MS.gene004358:intron 40.0%
TCATGTTTCCTAGGAATGCA+AGG + chr2.4:67754279-67754298 MS.gene004358:intron 40.0%
TCCAAATTTACCTGTAGACC+AGG - chr2.4:67753421-67753440 None:intergenic 40.0%
TCCTGGTCTACAGGTAAATT+TGG + chr2.4:67753417-67753436 MS.gene004358:intron 40.0%
TCGAAATCCTATGCCAACAA+AGG + chr2.4:67752360-67752379 MS.gene004358:CDS 40.0%
TCTGTCCCTCAAAAAATTGG+AGG + chr2.4:67751124-67751143 MS.gene004358:CDS 40.0%
TGTATGCTGCAAAATTAGCC+GGG - chr2.4:67752451-67752470 None:intergenic 40.0%
TTAGACACTGTAACAAAGGG+TGG - chr2.4:67751207-67751226 None:intergenic 40.0%
TTCAAGAAAGATGCTGTGCA+TGG + chr2.4:67753358-67753377 MS.gene004358:CDS 40.0%
TTCATCAAGTCGATAAGGCA+TGG - chr2.4:67752681-67752700 None:intergenic 40.0%
TTGGCTGCATTTCATCTAGA+TGG + chr2.4:67752386-67752405 MS.gene004358:CDS 40.0%
TTGTCTCCCAAAGGAAATTC+AGG - chr2.4:67754699-67754718 None:intergenic 40.0%
TTTGATAGAAATGAGGGCCT+AGG + chr2.4:67754224-67754243 MS.gene004358:intron 40.0%
! CACCTGTTTTCATTCCAAAG+TGG - chr2.4:67752792-67752811 None:intergenic 40.0%
! GACATCACTATACCTGGTTT+TGG - chr2.4:67753655-67753674 None:intergenic 40.0%
! GCACCAGCAATAATGAGTTT+TGG - chr2.4:67752859-67752878 None:intergenic 40.0%
! GGAATCTAAAATTCCCATGG+AGG - chr2.4:67754333-67754352 None:intergenic 40.0%
! GGATATAAACTGGTTTCTGG+CGG + chr2.4:67753794-67753813 MS.gene004358:CDS 40.0%
! GTGATGTCCCTTTTCATCAT+TGG + chr2.4:67753667-67753686 MS.gene004358:intron 40.0%
! TAGTGAAGAATTTTCCAGGG+GGG + chr2.4:67753557-67753576 MS.gene004358:intron 40.0%
! TGAATTTCCTTTGGGAGACA+AGG + chr2.4:67754698-67754717 MS.gene004358:CDS 40.0%
! TGTTCCTGAGACCAAACTTT+TGG - chr2.4:67754643-67754662 None:intergenic 40.0%
! TTTGAAACCTTGTCTCCCAA+AGG - chr2.4:67754708-67754727 None:intergenic 40.0%
!! ACCCACTTTGGAATGAAAAC+AGG + chr2.4:67752787-67752806 MS.gene004358:intron 40.0%
!! AGGCACTGAATTCTTGTTGA+GGG - chr2.4:67754132-67754151 None:intergenic 40.0%
!! ATTTTTCTCACACGTTGGCT+TGG + chr2.4:67752510-67752529 MS.gene004358:intron 40.0%
!! CATGTCCTTTAGGGTATTGA+TGG + chr2.4:67754068-67754087 MS.gene004358:intron 40.0%
!! TATCGACTTGATGAATCCAC+AGG + chr2.4:67752686-67752705 MS.gene004358:CDS 40.0%
!! TGCGTTTCTGATGATGGATA+TGG + chr2.4:67753054-67753073 MS.gene004358:CDS 40.0%
!!! TTGGCTTGGCTTTTCCAAAT+TGG + chr2.4:67752524-67752543 MS.gene004358:intron 40.0%
AAGCACTTGCGAGACTGTTT+GGG - chr2.4:67751731-67751750 None:intergenic 45.0%
AATGTCTCGAGGATAAGCAC+TGG - chr2.4:67752881-67752900 None:intergenic 45.0%
ACCTGCACGATGATAGGTTT+GGG - chr2.4:67753731-67753750 None:intergenic 45.0%
ACTGTAGAGCTCTTGCTAAC+CGG + chr2.4:67753759-67753778 MS.gene004358:CDS 45.0%
AGGGTTTGGATTTGCCTCAT+GGG + chr2.4:67752588-67752607 MS.gene004358:intron 45.0%
AGTAGGTGCGTTTCTGATGA+TGG + chr2.4:67753048-67753067 MS.gene004358:CDS 45.0%
ATGCCTCACAAACAGGTACT+CGG + chr2.4:67752180-67752199 MS.gene004358:CDS 45.0%
ATGGATATGGCTCACGTAAG+TGG + chr2.4:67753067-67753086 MS.gene004358:CDS 45.0%
CATGGGGGTCATTTATCTCA+TGG + chr2.4:67752605-67752624 MS.gene004358:CDS 45.0%
CTCAACAAGAATTCAGTGCC+TGG + chr2.4:67754131-67754150 MS.gene004358:CDS 45.0%
CTGCTAGTCCTCCAATTGTA+TGG - chr2.4:67753592-67753611 None:intergenic 45.0%
GAAGCCAAAAGTTTGGTCTC+AGG + chr2.4:67754636-67754655 MS.gene004358:CDS 45.0%
GAGCACCATCAATACCCTAA+AGG - chr2.4:67754076-67754095 None:intergenic 45.0%
GCAATGACAACAAGAGGACT+TGG + chr2.4:67754555-67754574 MS.gene004358:CDS 45.0%
GCTACTCAGTATCCTATTCC+CGG + chr2.4:67754753-67754772 MS.gene004358:CDS 45.0%
GTATGCTGCAAAATTAGCCG+GGG - chr2.4:67752450-67752469 None:intergenic 45.0%
TCACCAGCAATGACAACAAG+AGG + chr2.4:67754549-67754568 MS.gene004358:CDS 45.0%
TGAAGCTTGGTCGAAGAAAG+AGG - chr2.4:67750971-67750990 None:intergenic 45.0%
TGAGATAAATGACCCCCATG+AGG - chr2.4:67752605-67752624 None:intergenic 45.0%
TGGATATGGCTCACGTAAGT+GGG + chr2.4:67753068-67753087 MS.gene004358:CDS 45.0%
TGTTTCCTAGGAATGCAAGG+GGG + chr2.4:67754282-67754301 MS.gene004358:intron 45.0%
TTGGTTCATGCCTCACAAAC+AGG + chr2.4:67752173-67752192 MS.gene004358:CDS 45.0%
! ACCTGGTTCTTGTTGATCTG+AGG + chr2.4:67753828-67753847 MS.gene004358:CDS 45.0%
! AGTCCTCTTGTTGTCATTGC+TGG - chr2.4:67754555-67754574 None:intergenic 45.0%
! GGATCTAGCTTCTTGGACTA+TGG + chr2.4:67752031-67752050 MS.gene004358:CDS 45.0%
! TCAACCATTATCTGGTTCCC+CGG + chr2.4:67752430-67752449 MS.gene004358:CDS 45.0%
!! AGGTGATGGATCTAGCTTCT+TGG + chr2.4:67752024-67752043 MS.gene004358:intron 45.0%
!! CAGGCACTGAATTCTTGTTG+AGG - chr2.4:67754133-67754152 None:intergenic 45.0%
!! TTTAGGGAGTGTTTGGTGTG+TGG + chr2.4:67754182-67754201 MS.gene004358:intron 45.0%
!! TTTTGAGGGACAGAAGAAGG+AGG - chr2.4:67751118-67751137 None:intergenic 45.0%
!!! TGCTGTTTTTCCTGGTCTAC+AGG + chr2.4:67753408-67753427 MS.gene004358:CDS 45.0%
AAACACCCCCTTGCATTCCT+AGG - chr2.4:67754290-67754309 None:intergenic 50.0%
AGCTTGGTCGAAGAAAGAGG+TGG - chr2.4:67750968-67750987 None:intergenic 50.0%
ATGCAGCCAATGCCCTTTGT+TGG - chr2.4:67752376-67752395 None:intergenic 50.0%
CAAACAGCAAGTCACTCACC+AGG - chr2.4:67754152-67754171 None:intergenic 50.0%
CAAACCTATCATCGTGCAGG+TGG + chr2.4:67753730-67753749 MS.gene004358:intron 50.0%
CACCTGCACGATGATAGGTT+TGG - chr2.4:67753732-67753751 None:intergenic 50.0%
CAGGGTTTGGATTTGCCTCA+TGG + chr2.4:67752587-67752606 MS.gene004358:intron 50.0%
CATGAGGCAAATCCAAACCC+TGG - chr2.4:67752589-67752608 None:intergenic 50.0%
CCAATGCCCTTTGTTGGCAT+AGG - chr2.4:67752370-67752389 None:intergenic 50.0%
CGGGCATAATCAATGTCTCG+AGG - chr2.4:67752892-67752911 None:intergenic 50.0%
CTCACAAACAGGTACTCGGA+AGG + chr2.4:67752184-67752203 MS.gene004358:CDS 50.0%
CTTCCGAGTACCTGTTTGTG+AGG - chr2.4:67752186-67752205 None:intergenic 50.0%
GACAGAAGAAGGAGGAGAAG+AGG - chr2.4:67751110-67751129 None:intergenic 50.0%
GACTTCCTCCAGTCTTTGAG+AGG + chr2.4:67753313-67753332 MS.gene004358:intron 50.0%
GCCTCAGATCAACAAGAACC+AGG - chr2.4:67753832-67753851 None:intergenic 50.0%
GGGTTTGGATTTGCCTCATG+GGG + chr2.4:67752589-67752608 MS.gene004358:intron 50.0%
GGTTTGGATTTGCCTCATGG+GGG + chr2.4:67752590-67752609 MS.gene004358:CDS 50.0%
TAGGACCTCTCAAAGACTGG+AGG - chr2.4:67753321-67753340 None:intergenic 50.0%
TCATTGCTGGTGAACCGATG+CGG - chr2.4:67754542-67754561 None:intergenic 50.0%
TCCCAAACCTATCATCGTGC+AGG + chr2.4:67753727-67753746 MS.gene004358:intron 50.0%
TGGCGGTAGTGATAATCACC+TGG + chr2.4:67753811-67753830 MS.gene004358:CDS 50.0%
TTAGCCGGGGAACCAGATAA+TGG - chr2.4:67752437-67752456 None:intergenic 50.0%
! AAGGCAAACCTTGTGGGTTG+TGG - chr2.4:67753149-67753168 None:intergenic 50.0%
! AAGGCAGTGATGGAAGCAGT+TGG + chr2.4:67752154-67752173 MS.gene004358:CDS 50.0%
! AGCGGAGTTGCATCGATGAT+AGG + chr2.4:67750929-67750948 MS.gene004358:CDS 50.0%
! CAGTCTTTGAGAGGTCCTAG+AGG + chr2.4:67753322-67753341 MS.gene004358:intron 50.0%
! CCTATGCCAACAAAGGGCAT+TGG + chr2.4:67752367-67752386 MS.gene004358:CDS 50.0%
! CTAAGCGGGTGTTTGGTAGT+GGG - chr2.4:67754434-67754453 None:intergenic 50.0%
! GAAGCACTTGCGAGACTGTT+TGG - chr2.4:67751732-67751751 None:intergenic 50.0%
! GCTAACCGGTTAGTTGAGCA+TGG + chr2.4:67753773-67753792 MS.gene004358:CDS 50.0%
! TCTTTGAGAGGTCCTAGAGG+TGG + chr2.4:67753325-67753344 MS.gene004358:CDS 50.0%
! TGCTGTGCATGGAGTTGATC+TGG + chr2.4:67753369-67753388 MS.gene004358:CDS 50.0%
!! AAAAGGTGACAAGAGTGCCC+TGG + chr2.4:67754503-67754522 MS.gene004358:intron 50.0%
!! CTCTAGGACCTCTCAAAGAC+TGG - chr2.4:67753324-67753343 None:intergenic 50.0%
!! TAGGAATGCAAGGGGGTGTT+TGG + chr2.4:67754289-67754308 MS.gene004358:intron 50.0%
AATGACTCCACACCAGGCCT+AGG - chr2.4:67754244-67754263 None:intergenic 55.0%
AGGTACTCGGAAGGTTTGCC+GGG + chr2.4:67752193-67752212 MS.gene004358:CDS 55.0%
CAGGTACTCGGAAGGTTTGC+CGG + chr2.4:67752192-67752211 MS.gene004358:CDS 55.0%
CGGAAGGTTTGCCGGGTAAA+AGG + chr2.4:67752200-67752219 MS.gene004358:CDS 55.0%
GCAACCACCTGCACGATGAT+AGG - chr2.4:67753737-67753756 None:intergenic 55.0%
GCTAAGCGGGTGTTTGGTAG+TGG - chr2.4:67754435-67754454 None:intergenic 55.0%
TAGAAATGAGGGCCTAGGCC+TGG + chr2.4:67754229-67754248 MS.gene004358:intron 55.0%
TATGGTTATGAGGACCCCCC+TGG - chr2.4:67753574-67753593 None:intergenic 55.0%
TGTGACCACCACAACCCACA+AGG + chr2.4:67753138-67753157 MS.gene004358:CDS 55.0%
! GCAAACCTTGTGGGTTGTGG+TGG - chr2.4:67753146-67753165 None:intergenic 55.0%
!! GGGTATTGATGGTGCTCGTG+TGG + chr2.4:67754079-67754098 MS.gene004358:intron 55.0%
TGAACCGATGCGGATGCCTC+CGG - chr2.4:67754532-67754551 None:intergenic 60.0%
!! GACAAGAGTGCCCTGGTTCC+CGG + chr2.4:67754510-67754529 MS.gene004358:CDS 60.0%
ATGAGGGCCTAGGCCTGGTG+TGG + chr2.4:67754234-67754253 MS.gene004358:intron 65.0%
GAACCGATGCGGATGCCTCC+GGG - chr2.4:67754531-67754550 None:intergenic 65.0%
!! AAGAGTGCCCTGGTTCCCGG+AGG + chr2.4:67754513-67754532 MS.gene004358:CDS 65.0%
!! GTTCCCGGAGGCATCCGCAT+CGG + chr2.4:67754525-67754544 MS.gene004358:CDS 65.0%
GCGGATGCCTCCGGGAACCA+GGG - chr2.4:67754523-67754542 None:intergenic 70.0%
TGCGGATGCCTCCGGGAACC+AGG - chr2.4:67754524-67754543 None:intergenic 70.0%
GCAACTCCGCTGCACGCCGC+AGG - chr2.4:67750920-67750939 None:intergenic 75.0%


Chromosome Type Strat End Strand Name
chr2.4 gene 67750914 67754782 67750914 ID=MS.gene004358
chr2.4 mRNA 67750914 67754782 67750914 ID=MS.gene004358.t1;Parent=MS.gene004358
chr2.4 exon 67750914 67751145 67750914 ID=MS.gene004358.t1.exon1;Parent=MS.gene004358.t1
chr2.4 CDS 67750914 67751145 67750914 ID=cds.MS.gene004358.t1;Parent=MS.gene004358.t1
chr2.4 exon 67752026 67752221 67752026 ID=MS.gene004358.t1.exon2;Parent=MS.gene004358.t1
chr2.4 CDS 67752026 67752221 67752026 ID=cds.MS.gene004358.t1;Parent=MS.gene004358.t1
chr2.4 exon 67752328 67752502 67752328 ID=MS.gene004358.t1.exon3;Parent=MS.gene004358.t1
chr2.4 CDS 67752328 67752502 67752328 ID=cds.MS.gene004358.t1;Parent=MS.gene004358.t1
chr2.4 exon 67752590 67752707 67752590 ID=MS.gene004358.t1.exon4;Parent=MS.gene004358.t1
chr2.4 CDS 67752590 67752707 67752590 ID=cds.MS.gene004358.t1;Parent=MS.gene004358.t1
chr2.4 exon 67752809 67752921 67752809 ID=MS.gene004358.t1.exon5;Parent=MS.gene004358.t1
chr2.4 CDS 67752809 67752921 67752809 ID=cds.MS.gene004358.t1;Parent=MS.gene004358.t1
chr2.4 exon 67753037 67753159 67753037 ID=MS.gene004358.t1.exon6;Parent=MS.gene004358.t1
chr2.4 CDS 67753037 67753159 67753037 ID=cds.MS.gene004358.t1;Parent=MS.gene004358.t1
chr2.4 exon 67753325 67753429 67753325 ID=MS.gene004358.t1.exon7;Parent=MS.gene004358.t1
chr2.4 CDS 67753325 67753429 67753325 ID=cds.MS.gene004358.t1;Parent=MS.gene004358.t1
chr2.4 exon 67753575 67753661 67753575 ID=MS.gene004358.t1.exon8;Parent=MS.gene004358.t1
chr2.4 CDS 67753575 67753661 67753575 ID=cds.MS.gene004358.t1;Parent=MS.gene004358.t1
chr2.4 exon 67753749 67753856 67753749 ID=MS.gene004358.t1.exon9;Parent=MS.gene004358.t1
chr2.4 CDS 67753749 67753856 67753749 ID=cds.MS.gene004358.t1;Parent=MS.gene004358.t1
chr2.4 exon 67754080 67754152 67754080 ID=MS.gene004358.t1.exon10;Parent=MS.gene004358.t1
chr2.4 CDS 67754080 67754152 67754080 ID=cds.MS.gene004358.t1;Parent=MS.gene004358.t1
chr2.4 exon 67754508 67754782 67754508 ID=MS.gene004358.t1.exon11;Parent=MS.gene004358.t1
chr2.4 CDS 67754508 67754782 67754508 ID=cds.MS.gene004358.t1;Parent=MS.gene004358.t1
Gene Sequence

>MS.gene004358

ATGCCTGCGGCGTGCAGCGGAGTTGCATCGATGATAGGTTCTTTGCAACAACCACCTCTTTCTTCGACCAAGCTTCATAATTTCTCTCATGGAACCCTTTTACCTCAACTTCATTTCAACAATAACAGTAATCATTTCAAGCCCTGCAAAGTATCTCTTCATGAAGCAACTTTTGGGAAATCATCATCATCTTCCTCTTCTCCTCCTTCTTCTGTCCCTCAAAAAATTGGAGGTAAATTCTCTCTCTTTTTCTCCATTTCATTTTTTGATTCTATTTGCTTTAATATTATCCACCCTTTGTTACAGTGTCTAACAATTAGGATAGATAGTATATATAAATTGTCTGAGTTTAATTGAATATTACTGCAACATGCAATCTATTTTATTTTTTTACTAATTCTATATTTATTGTACACATTTTGTTATGTATAACAGTCTTTAAATTCGGTTTAATTTTATTTTCATTAGTAATTTTTTGCCCTGTTTGGATAAACAACTTAATTAAGTGCTTATAGCATAAACATATATATAAGTGCTTGTGTAAAAGCTATATCTTTAACAAAAGATGAAATAAAAGTCTCTTTTTTTTTTTCTTCCTTCCGATAAGTTATAAGTTGTTTTTGATTTATAAGCTGATAAACAAACACAAGACAATTTCTGCTTTTTTGAAAAAATCTCTATGTTTGTGAGTATCAAAATCACTTTTTTTTTTATAATTGGTAACAAACATACACTACACCGAAGAATTTTTAAAAATAAGTTGAAATCAACTTATGGACTTGTAAATTTGTCATAAGCTGGTTCTGTATGTTCTCCCAAACAGTCTCGCAAGTGCTTCTGTCAACAAATAAGCTCAAATAAGTCGATCAAAACAGGCCCCAAGTATGACAATGTGAAAAACAATATATTTTACTCAAAGCACTTCTGGGATATTTGTTTCTGTATTTTTTTTCATCTCCTTTGGTGTCAAGTGTCATTATAAAGTTCATGTTTTTTATGCCATCGTGTCAATATATATCTGAATTCTGTATTTTGTATACCGAAATTTAAATATATATGCATGCTTGGTGATCTTTCTTGTTCATGGAATAATGTGCTATTTCAAATATCAGGTGATGGATCTAGCTTCTTGGACTATGGCTTGAGTGAAGCTGATCCTGATGTTCATGCCATAATTAACAAGGAAAAGGACCGTCAATTCAGAAGTCTTGAACTTATTGCTTCTGAGAATTTTACATCTAAGGCAGTGATGGAAGCAGTTGGTTCATGCCTCACAAACAGGTACTCGGAAGGTTTGCCGGGTAAAAGGTAAATTCTTATCTATTTTTACTTCTCTAGAAATGGGAGTTTTACTTGAAGTTTCCTTTTTTCCCTCTTCTGCAAATTTGTTGATTGGATCCCATTTACATGTAAGGTATTATGGTGGCAATGAGCACATTGATGAGCTCGAAATCCTATGCCAACAAAGGGCATTGGCTGCATTTCATCTAGATGGTAACAAGTGGGGTGTAAATGTTCAACCATTATCTGGTTCCCCGGCTAATTTTGCAGCATACACTGCAATTCTTAAACCACATGATCGTATAATGGTAAACTATTTTTCTCACACGTTGGCTTGGCTTTTCCAAATTGGAAGTCGATTTTGATAGCGTTCATGTGTAATGATATGTTACCAGGGTTTGGATTTGCCTCATGGGGGTCATTTATCTCATGGATTCATGACAGCTAAAAGACGTGTATCAGGCACATCAATTTATTTTGAATCCATGCCTTATCGACTTGATGAATCCACAGGTGCTTATATTTTGTCCTTAAAATCGTTTCAGATATATTGGCTTATTTGTGGAATAACTTGGGATTATTTTTTTCTTTCACCCACTTTGGAATGAAAACAGGTGTTATTGATTATGATATGTTGGAGAAAACTGCTGCTCTATTCCGACCAAAACTCATTATTGCTGGTGCCAGTGCTTATCCTCGAGACATTGATTATGCCCGCTTTAGAAAAGTATGTTCTGTACTTGAGTATTTTCTGATATTATAATCATCATTATCTGCTTCTCTACATCGTATGGTTTTTTCCTTCACAAATAGCTAATTACATCTTTATATGCAAATGAAAGATTGCAGATTCAGTAGGTGCGTTTCTGATGATGGATATGGCTCACGTAAGTGGGCTTATTGCTGCTTCTGTTCTTGCTGATCCCTTTGAGTTTGTTGATATTGTGACCACCACAACCCACAAGGTTTGCCTTGAGATATTTGTGTTTTCTTTGTATTTTTCCACTCAAAATTGAAAAGAAAGAGTTTGCTTTTTTTTTTTTTGGTTTAAAAACATAATTCTATTTACTTGAAGTTATGAAGTCGGTACTTTTCTTTGTAATACTCACAACACTCATGACTTCCTCCAGTCTTTGAGAGGTCCTAGAGGTGGTATGATATTCTTCAAGAAAGATGCTGTGCATGGAGTTGATCTGGAGTCTGCCATTAACAATGCTGTTTTTCCTGGTCTACAGGTAAATTTGGAATATCCTCTAATTAGTTCTTTTTTAACTATTCTGGTCGAGAAAGTGCATGAATCCTATGTACCTATTGAGTCAGATGCATTTATCTTCTTTACCTTCCTAGTTTGTGATTTTAATATAGTGAAGAATTTTCCAGGGGGGTCCTCATAACCATACAATTGGAGGACTAGCAGTTTGCTTGAAGTATGCTCAGTCTCTAGATTTTAAAAATTACCAAAACCAGGTATAGTGATGTCCCTTTTCATCATTGGTTAGAGTTTGACATAAAGCACTTTGTAACAATAATACTCCCAAACCTATCATCGTGCAGGTGGTTGCTAACTGTAGAGCTCTTGCTAACCGGTTAGTTGAGCATGGATATAAACTGGTTTCTGGCGGTAGTGATAATCACCTGGTTCTTGTTGATCTGAGGCCATCAGTAAGCTTGTTGCTCTTTTCTTTGTCAATATAATGATAATTCTGTCTTGGCTTCCCGTCCCCAAATTTTTTTAGAAATAACGAGTATGAAATTTTCTGAAAAATTTGTAGTGCTATGTAAATTGCTGGCGTGTTTTTAGTGTGAAAATAGGTTTGATTTTGCTTATTGATGTATATTCCTTTTAGTACCTGACTGACTGTATTTCACATATCATGTCCTTTAGGGTATTGATGGTGCTCGTGTGGAGAAAATTCTTGACATGGCTTCTATAACCCTCAACAAGAATTCAGTGCCTGGTGAGTGACTTGCTGTTTGTTGCATATAATTTAGGGAGTGTTTGGTGTGTGGAGTCATTTTCCTTTTTCTTTTTGATAGAAATGAGGGCCTAGGCCTGGTGTGGAGTCATTTTTCATTCACAGGAATCATGTTTCCTAGGAATGCAAGGGGGTGTTTGGCAAGTTTCAAGTTTTTCACCTCCATGGGAATTTTAGATTCCCATTCAATTTCTTTTTTTTAAAACGTTCATACGAATCATGACAGTTCAAGACTTCCAATTTTAGAGAGTTAAAAAAATCCCACTACCAAACACCCGCTTAGCATTTTTGCTTATTTGTTGTGATTATTACTGACATGTGCTAATTATTACAAAAGGTGACAAGAGTGCCCTGGTTCCCGGAGGCATCCGCATCGGTTCACCAGCAATGACAACAAGAGGACTTGGTGAGAGAGAATTTGAACTAATTGCAGACTTAATTCATGAGGGTGTGCAGATAAGTCTTGAAGCCAAAAGTTTGGTCTCAGGAACAAAGGTTCAAGATTTTCTAAACTTTGTGTTAGCTCCTGAATTTCCTTTGGGAGACAAGGTTTCAAATTTGCGGAGGAAAGTTGAAGCTCTTGCTACTCAGTATCCTATTCCCGGAGTCTAA
Protein sequence

>MS.gene004358.t1

MPAACSGVASMIGSLQQPPLSSTKLHNFSHGTLLPQLHFNNNSNHFKPCKVSLHEATFGKSSSSSSSPPSSVPQKIGGDGSSFLDYGLSEADPDVHAIINKEKDRQFRSLELIASENFTSKAVMEAVGSCLTNRYSEGLPGKRYYGGNEHIDELEILCQQRALAAFHLDGNKWGVNVQPLSGSPANFAAYTAILKPHDRIMGLDLPHGGHLSHGFMTAKRRVSGTSIYFESMPYRLDESTGVIDYDMLEKTAALFRPKLIIAGASAYPRDIDYARFRKIADSVGAFLMMDMAHVSGLIAASVLADPFEFVDIVTTTTHKSLRGPRGGMIFFKKDAVHGVDLESAINNAVFPGLQGGPHNHTIGGLAVCLKYAQSLDFKNYQNQVVANCRALANRLVEHGYKLVSGGSDNHLVLVDLRPSGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGLGEREFELIADLIHEGVQISLEAKSLVSGTKVQDFLNFVLAPEFPLGDKVSNLRRKVEALATQYPIPGV