Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene004405.t1 | XP_003593906.1 | 96.4 | 449 | 16 | 0 | 1 | 449 | 1 | 449 | 4.90E-245 | 856.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene004405.t1 | Q9M209 | 60.0 | 452 | 158 | 5 | 1 | 443 | 1 | 438 | 2.9e-145 | 516.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene004405.t1 | G7IP72 | 96.4 | 449 | 16 | 0 | 1 | 449 | 1 | 449 | 3.5e-245 | 856.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene034607 | MS.gene004405 | PPI |
| MS.gene87461 | MS.gene004405 | PPI |
| MS.gene025936 | MS.gene004405 | PPI |
| MS.gene22822 | MS.gene004405 | PPI |
| MS.gene012007 | MS.gene004405 | PPI |
| MS.gene76412 | MS.gene004405 | PPI |
| MS.gene024471 | MS.gene004405 | PPI |
| MS.gene46475 | MS.gene004405 | PPI |
| MS.gene050621 | MS.gene004405 | PPI |
| MS.gene39195 | MS.gene004405 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene004405.t1 | MTR_2g019210 | 96.437 | 449 | 16 | 0 | 1 | 449 | 1 | 449 | 0.0 | 899 |
| MS.gene004405.t1 | MTR_2g019210 | 97.253 | 364 | 10 | 0 | 1 | 364 | 1 | 364 | 0.0 | 739 |
| MS.gene004405.t1 | MTR_1g063090 | 90.476 | 294 | 28 | 0 | 1 | 294 | 1 | 294 | 0.0 | 566 |
| MS.gene004405.t1 | MTR_8g077430 | 29.368 | 269 | 168 | 7 | 11 | 264 | 4 | 265 | 1.19e-26 | 108 |
| MS.gene004405.t1 | MTR_1g031820 | 29.963 | 267 | 169 | 6 | 11 | 264 | 401 | 662 | 3.24e-26 | 112 |
| MS.gene004405.t1 | MTR_1g007060 | 25.899 | 278 | 187 | 6 | 17 | 278 | 28 | 302 | 2.37e-21 | 94.4 |
| MS.gene004405.t1 | MTR_1g007060 | 26.749 | 243 | 163 | 4 | 17 | 247 | 28 | 267 | 1.81e-20 | 91.7 |
| MS.gene004405.t1 | MTR_8g077430 | 27.228 | 202 | 128 | 6 | 75 | 264 | 2 | 196 | 7.52e-14 | 70.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene004405.t1 | AT3G60500 | 60.000 | 445 | 149 | 6 | 1 | 433 | 1 | 428 | 0.0 | 513 |
| MS.gene004405.t1 | AT3G60500 | 60.000 | 445 | 149 | 6 | 1 | 433 | 1 | 428 | 0.0 | 513 |
| MS.gene004405.t1 | AT3G60500 | 60.000 | 445 | 149 | 6 | 1 | 433 | 1 | 428 | 0.0 | 513 |
| MS.gene004405.t1 | AT3G60500 | 63.708 | 383 | 118 | 5 | 1 | 377 | 1 | 368 | 3.25e-170 | 483 |
| MS.gene004405.t1 | AT3G12990 | 71.192 | 302 | 87 | 0 | 1 | 302 | 1 | 302 | 8.41e-160 | 454 |
| MS.gene004405.t1 | AT3G12990 | 71.192 | 302 | 87 | 0 | 1 | 302 | 1 | 302 | 8.41e-160 | 454 |
| MS.gene004405.t1 | AT3G12990 | 72.887 | 284 | 77 | 0 | 1 | 284 | 1 | 284 | 4.05e-152 | 433 |
| MS.gene004405.t1 | AT3G12990 | 75.701 | 214 | 52 | 0 | 1 | 214 | 1 | 214 | 1.66e-117 | 343 |
| MS.gene004405.t1 | AT3G07750 | 29.740 | 269 | 167 | 7 | 11 | 264 | 3 | 264 | 3.04e-27 | 110 |
| MS.gene004405.t1 | AT3G07750 | 29.740 | 269 | 167 | 7 | 11 | 264 | 3 | 264 | 3.04e-27 | 110 |
| MS.gene004405.t1 | AT1G60080 | 27.881 | 269 | 176 | 5 | 17 | 269 | 26 | 292 | 3.03e-23 | 99.8 |
Find 114 sgRNAs with CRISPR-Local
Find 286 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CGCAAGTTGAACATTAAATT+TGG | 0.095631 | 2.4:-67237054 | MS.gene004405:CDS |
| CATAACTTAATTCCCATTAT+TGG | 0.197437 | 2.4:+67233540 | None:intergenic |
| TTCTTTCTGCCAAACTTGTC+TGG | 0.208475 | 2.4:-67236783 | MS.gene004405:CDS |
| ATTTCCTGCGCTGGTTCTTC+TGG | 0.247600 | 2.4:+67233676 | None:intergenic |
| CTTCCAGTTGCAGTCACCTT+TGG | 0.284591 | 2.4:-67236377 | MS.gene004405:CDS |
| CATTATAGACCGCGGTTTAC+GGG | 0.295153 | 2.4:-67236839 | MS.gene004405:CDS |
| TCCTTTGAGCCTGGCCATCC+TGG | 0.308879 | 2.4:-67236886 | MS.gene004405:CDS |
| GAAAGGCGAGACAAATTTAA+TGG | 0.327208 | 2.4:-67235412 | MS.gene004405:CDS |
| GCATTATAGACCGCGGTTTA+CGG | 0.332870 | 2.4:-67236840 | MS.gene004405:CDS |
| AATCCAAAGGTGACTGCAAC+TGG | 0.344185 | 2.4:+67236374 | None:intergenic |
| GAATGTGATGCCACATCATT+AGG | 0.345051 | 2.4:-67235390 | MS.gene004405:CDS |
| GGAGAATCTGCCGTTGAGTT+AGG | 0.366917 | 2.4:-67236865 | MS.gene004405:CDS |
| GCAAGTTGAACATTAAATTT+GGG | 0.368287 | 2.4:-67237053 | MS.gene004405:CDS |
| ATTAAATTTGGGAGGGATGA+TGG | 0.374567 | 2.4:-67237042 | MS.gene004405:CDS |
| AGTGGATGGTCGGGGCCCCT+TGG | 0.390912 | 2.4:-67237082 | MS.gene004405:CDS |
| TGTGGAACCACTGCCACGTT+AGG | 0.394002 | 2.4:-67235495 | MS.gene004405:CDS |
| AGAAGGCCTGAATGCTCGTT+GGG | 0.394350 | 2.4:-67236564 | MS.gene004405:CDS |
| TCTCGCCTTTCAGCTTCAAC+TGG | 0.394391 | 2.4:+67235424 | None:intergenic |
| TCATTAGGCCTATCTTTGTA+AGG | 0.401300 | 2.4:+67236955 | None:intergenic |
| ATAGATAGTGTACCTTCATT+AGG | 0.408385 | 2.4:+67236940 | None:intergenic |
| ACTCACTGCATCATTTATCT+TGG | 0.411650 | 2.4:+67236022 | None:intergenic |
| GCGAATGGCCCAGACAAGTT+TGG | 0.413491 | 2.4:+67236774 | None:intergenic |
| TCTTTCTGCCAAACTTGTCT+GGG | 0.424579 | 2.4:-67236782 | MS.gene004405:CDS |
| CAGTCATTACAGCCTCTTCA+TGG | 0.425419 | 2.4:+67236177 | None:intergenic |
| TTGTGCAGCCTTACAAAGAT+AGG | 0.432049 | 2.4:-67236963 | MS.gene004405:CDS |
| GCTGATCCTTCCTTTGAGCC+TGG | 0.434825 | 2.4:-67236895 | MS.gene004405:CDS |
| ATTGACACTGCTCTAACTGC+TGG | 0.450510 | 2.4:-67233634 | MS.gene004405:CDS |
| TGACACGTGTCTCGCCCAAT+TGG | 0.455639 | 2.4:+67237007 | None:intergenic |
| AGCAGAGATTAGCTAATTGT+TGG | 0.456222 | 2.4:-67237161 | MS.gene004405:CDS |
| GCAGTTAGAGCAGTGTCAAT+TGG | 0.458988 | 2.4:+67233637 | None:intergenic |
| AGAGCTTCGAGTGGATGGTC+GGG | 0.470323 | 2.4:-67237091 | MS.gene004405:CDS |
| ATCAACTCCTAGTAAACAAA+AGG | 0.472420 | 2.4:-67233719 | MS.gene004405:CDS |
| TGGGTCTGCCGAGATCCAAT+TGG | 0.473726 | 2.4:-67237022 | MS.gene004405:CDS |
| GTGGAACCACTGCCACGTTA+GGG | 0.484142 | 2.4:-67235494 | MS.gene004405:CDS |
| AACTCAACGGCAGATTCTCC+AGG | 0.490630 | 2.4:+67236868 | None:intergenic |
| TGCTGCAAATATTGCTGCAT+TGG | 0.500659 | 2.4:-67236604 | MS.gene004405:CDS |
| CATGAAGAGGCTGTAATGAC+TGG | 0.506831 | 2.4:-67236176 | MS.gene004405:CDS |
| GGGTCTGCCGAGATCCAATT+GGG | 0.507284 | 2.4:-67237021 | MS.gene004405:CDS |
| TTAAATTTGGGAGGGATGAT+GGG | 0.508701 | 2.4:-67237041 | MS.gene004405:CDS |
| GGAAGATGATGTATAATCAA+AGG | 0.510424 | 2.4:+67236395 | None:intergenic |
| TCCAGGATGGCCAGGCTCAA+AGG | 0.511535 | 2.4:+67236885 | None:intergenic |
| TTGAAAAGCACAACAATGAA+AGG | 0.511669 | 2.4:-67235566 | MS.gene004405:CDS |
| AGAGATTAGCTAATTGTTGG+CGG | 0.512799 | 2.4:-67237158 | MS.gene004405:CDS |
| GTGTGTGCAATTCAAAAGCC+TGG | 0.513608 | 2.4:-67236119 | MS.gene004405:CDS |
| CAGAGCTTCGAGTGGATGGT+CGG | 0.514274 | 2.4:-67237092 | MS.gene004405:CDS |
| GAAGATGATGTATAATCAAA+GGG | 0.519406 | 2.4:+67236396 | None:intergenic |
| ACGACATTCTTCCTCTGTTG+CGG | 0.519551 | 2.4:-67235526 | MS.gene004405:CDS |
| GCAGATTCTCCAGGATGGCC+AGG | 0.520556 | 2.4:+67236877 | None:intergenic |
| ACTGTCTTGATTTCCTGCGC+TGG | 0.521832 | 2.4:+67233667 | None:intergenic |
| CTATCAGAGCTTCGAGTGGA+TGG | 0.523011 | 2.4:-67237096 | MS.gene004405:CDS |
| AAACTTGCTCATGTTAAAGC+TGG | 0.525982 | 2.4:-67236056 | MS.gene004405:CDS |
| GCAGAGCGATTCAGTGTCAA+TGG | 0.527593 | 2.4:+67236807 | None:intergenic |
| TGAATTGACACAATCTGAGT+AGG | 0.528375 | 2.4:+67235025 | None:intergenic |
| CTGACACCTTACCAGCTTGA+GGG | 0.534896 | 2.4:+67235315 | None:intergenic |
| ACTGCAACACTTAATGCAAA+TGG | 0.537645 | 2.4:-67236146 | MS.gene004405:CDS |
| CTTCACTGAATTCTCTCCCA+TGG | 0.539169 | 2.4:-67236917 | MS.gene004405:CDS |
| ACATTCTTCCTCTGTTGCGG+TGG | 0.540050 | 2.4:-67235523 | MS.gene004405:CDS |
| GTTCAACTTGCGATAGTCCA+AGG | 0.542934 | 2.4:+67237065 | None:intergenic |
| TGGAACCACTGCCACGTTAG+GGG | 0.547405 | 2.4:-67235493 | MS.gene004405:CDS |
| TAAACAAAAGGATTCAAGAC+AGG | 0.550828 | 2.4:-67233707 | MS.gene004405:CDS |
| GAGCTTCGAGTGGATGGTCG+GGG | 0.552607 | 2.4:-67237090 | MS.gene004405:CDS |
| CAGAAGGCCTGAATGCTCGT+TGG | 0.553951 | 2.4:-67236565 | MS.gene004405:CDS |
| TTTCAGCAATGAAAATCTTG+TGG | 0.555730 | 2.4:-67236351 | MS.gene004405:intron |
| TCTGTTGCGGTGGATGTATG+TGG | 0.557391 | 2.4:-67235513 | MS.gene004405:CDS |
| TTATCGGTGGCCCCTCAAGC+TGG | 0.557741 | 2.4:-67235326 | MS.gene004405:intron |
| TGAAAAGCACAACAATGAAA+GGG | 0.559466 | 2.4:-67235565 | MS.gene004405:CDS |
| ACTGCTGGGCAGAGTAATGA+AGG | 0.560209 | 2.4:-67233619 | MS.gene004405:CDS |
| GTTGAACATTAAATTTGGGA+GGG | 0.560586 | 2.4:-67237049 | MS.gene004405:CDS |
| CAATCAGATGGTGATAAAGA+AGG | 0.565707 | 2.4:-67235459 | MS.gene004405:CDS |
| TACAAAGATAGGCCTAATGA+AGG | 0.565777 | 2.4:-67236952 | MS.gene004405:CDS |
| ACCCTGCATTGTCTAGTATG+TGG | 0.565903 | 2.4:+67236743 | None:intergenic |
| CTAGACCAGTTGAAGCTGAA+AGG | 0.569023 | 2.4:-67235429 | MS.gene004405:CDS |
| TGTGTGCAATTCAAAAGCCT+GGG | 0.572264 | 2.4:-67236118 | MS.gene004405:CDS |
| AGTTGAACATTAAATTTGGG+AGG | 0.574931 | 2.4:-67237050 | MS.gene004405:CDS |
| TTCAACTTGCGATAGTCCAA+GGG | 0.575404 | 2.4:+67237066 | None:intergenic |
| CTCAAAGGAAGGATCAGCCA+TGG | 0.576940 | 2.4:+67236900 | None:intergenic |
| TAAGCCAGAAGAACCAGCGC+AGG | 0.581328 | 2.4:-67233680 | MS.gene004405:CDS |
| AAGGCCTGAATGCTCGTTGG+GGG | 0.582507 | 2.4:-67236562 | MS.gene004405:CDS |
| GTGCAGAGTAGCAAGAAGGA+TGG | 0.583283 | 2.4:-67235363 | MS.gene004405:CDS |
| GAATTGACACAATCTGAGTA+GGG | 0.583687 | 2.4:+67235026 | None:intergenic |
| GGAAAACAAAATCAATCAGA+TGG | 0.587328 | 2.4:-67235471 | MS.gene004405:CDS |
| ACTGACACCTTACCAGCTTG+AGG | 0.591782 | 2.4:+67235314 | None:intergenic |
| TGTCTCGCCCAATTGGATCT+CGG | 0.592757 | 2.4:+67237014 | None:intergenic |
| TGATGTATAATCAAAGGGAG+TGG | 0.594545 | 2.4:+67236401 | None:intergenic |
| GGAACCACTGCCACGTTAGG+GGG | 0.597428 | 2.4:-67235492 | MS.gene004405:CDS |
| GGATGGCCAGGCTCAAAGGA+AGG | 0.597532 | 2.4:+67236889 | None:intergenic |
| CTGAGGAAGCTGACCTCAGG+AGG | 0.600233 | 2.4:+67236510 | None:intergenic |
| TTGACACTGCTCTAACTGCT+GGG | 0.600516 | 2.4:-67233633 | MS.gene004405:CDS |
| CTGTCAAGCCCAAGAACAAG+CGG | 0.602139 | 2.4:-67233579 | MS.gene004405:CDS |
| TGACACCTTACCAGCTTGAG+GGG | 0.602551 | 2.4:+67235316 | None:intergenic |
| TAATGAAGGTAAGACTCTGA+AGG | 0.603765 | 2.4:-67233605 | MS.gene004405:CDS |
| GAAGGCCTGAATGCTCGTTG+GGG | 0.609514 | 2.4:-67236563 | MS.gene004405:CDS |
| ATCCACATACTAGACAATGC+AGG | 0.610994 | 2.4:-67236745 | MS.gene004405:CDS |
| ACAAGTGCAGAGTAGCAAGA+AGG | 0.616848 | 2.4:-67235367 | MS.gene004405:CDS |
| CATCTCTGAAGACATTCAGA+AGG | 0.617687 | 2.4:-67236581 | MS.gene004405:CDS |
| ACAGCCTCTTCATGGTATGT+CGG | 0.618076 | 2.4:+67236185 | None:intergenic |
| CTGCACTTGTCCTAATGATG+TGG | 0.618547 | 2.4:+67235380 | None:intergenic |
| TCAAAGGAAGGATCAGCCAT+GGG | 0.631822 | 2.4:+67236901 | None:intergenic |
| AGGCCTGAATGCTCGTTGGG+GGG | 0.639267 | 2.4:-67236561 | MS.gene004405:CDS |
| TCCACATACTAGACAATGCA+GGG | 0.639330 | 2.4:-67236744 | MS.gene004405:intron |
| AGTTGTAGTGCATCCTCCTG+AGG | 0.641826 | 2.4:-67236523 | MS.gene004405:intron |
| AAAGCTTCTCTAGCTTCTCG+TGG | 0.641908 | 2.4:-67234993 | MS.gene004405:intron |
| TATAATGCGTCCTAACTCAA+CGG | 0.642138 | 2.4:+67236855 | None:intergenic |
| CAACGGCAGATTCTCCAGGA+TGG | 0.646304 | 2.4:+67236872 | None:intergenic |
| GGATCCGACATACCATGAAG+AGG | 0.653779 | 2.4:-67236189 | MS.gene004405:CDS |
| CTCTACTTTCCCGTAAACCG+CGG | 0.664238 | 2.4:+67236830 | None:intergenic |
| TCTTCTATCAGAGCTTCGAG+TGG | 0.667601 | 2.4:-67237100 | MS.gene004405:CDS |
| TATGTGGATGTCAATGCGAA+TGG | 0.686074 | 2.4:+67236759 | None:intergenic |
| GTGCAATTCAAAAGCCTGGG+GGG | 0.686221 | 2.4:-67236115 | MS.gene004405:CDS |
| ACATACATCCACCGCAACAG+AGG | 0.701182 | 2.4:+67235515 | None:intergenic |
| GTGTGCAATTCAAAAGCCTG+GGG | 0.708877 | 2.4:-67236117 | MS.gene004405:CDS |
| TCAACTTGCGATAGTCCAAG+GGG | 0.732414 | 2.4:+67237067 | None:intergenic |
| TTAGGACGCATTATAGACCG+CGG | 0.761510 | 2.4:-67236847 | MS.gene004405:CDS |
| TGTGCAATTCAAAAGCCTGG+GGG | 0.776295 | 2.4:-67236116 | MS.gene004405:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAAAAAAAAATTTACAG+AGG | - | chr2.4:67236491-67236510 | MS.gene004405:intron | 10.0% |
| !! | AAAAAAAAAAAATTTACAGA+GGG | - | chr2.4:67236492-67236511 | MS.gene004405:intron | 10.0% |
| !! | AAAACAAAAAAAAAATTACA+GGG | + | chr2.4:67236358-67236377 | None:intergenic | 10.0% |
| !! | TAAAAAATAATAATTTACAG+GGG | + | chr2.4:67236329-67236348 | None:intergenic | 10.0% |
| !!! | TTCATATATTTTATAATCAT+TGG | - | chr2.4:67236864-67236883 | MS.gene004405:CDS | 10.0% |
| !! | AAAAAAAAAAATTTACAGAG+GGG | - | chr2.4:67236493-67236512 | MS.gene004405:intron | 15.0% |
| !! | AAACAAAAAAAAAATTACAG+GGG | + | chr2.4:67236357-67236376 | None:intergenic | 15.0% |
| !! | CAAAACAAAAAAAAAATTAC+AGG | + | chr2.4:67236359-67236378 | None:intergenic | 15.0% |
| !! | GTAATTTAACAAAACAATAA+GGG | - | chr2.4:67236249-67236268 | MS.gene004405:intron | 15.0% |
| !! | TTTAGATAAAATTGTTCAAT+TGG | - | chr2.4:67235891-67235910 | MS.gene004405:intron | 15.0% |
| !!! | AAAACAATTTTTTTTTACAG+GGG | - | chr2.4:67236464-67236483 | MS.gene004405:intron | 15.0% |
| !!! | CAAAACAATTTTTTTTTACA+GGG | - | chr2.4:67236463-67236482 | MS.gene004405:intron | 15.0% |
| !!! | CTGTAATTTTTTTTTTGTTT+TGG | - | chr2.4:67236357-67236376 | MS.gene004405:CDS | 15.0% |
| !! | AAAAAAACATCTTCCAATAA+TGG | - | chr2.4:67237158-67237177 | MS.gene004405:CDS | 20.0% |
| !! | AAAAAACATCTTCCAATAAT+GGG | - | chr2.4:67237159-67237178 | MS.gene004405:CDS | 20.0% |
| !! | AACAAAAAAAAAATTACAGG+GGG | + | chr2.4:67236356-67236375 | None:intergenic | 20.0% |
| !! | AGCAACATTAATTATTGTTT+GGG | + | chr2.4:67236557-67236576 | None:intergenic | 20.0% |
| !! | ATAGGATAATAAATGAGTAA+AGG | + | chr2.4:67236098-67236117 | None:intergenic | 20.0% |
| !! | ATATATACCAAAATCAAGAA+AGG | + | chr2.4:67234457-67234476 | None:intergenic | 20.0% |
| !! | ATTTCTGCAAAAAAAAAAGT+TGG | - | chr2.4:67236412-67236431 | MS.gene004405:CDS | 20.0% |
| !! | GGTAATTTAACAAAACAATA+AGG | - | chr2.4:67236248-67236267 | MS.gene004405:intron | 20.0% |
| !! | TCTTAAAATGACAACTAAAA+GGG | + | chr2.4:67236013-67236032 | None:intergenic | 20.0% |
| !!! | AAGCATGAAAATTTTCATAA+CGG | + | chr2.4:67234978-67234997 | None:intergenic | 20.0% |
| !!! | AATCAAAAGTTATTAGTTCT+TGG | + | chr2.4:67235426-67235445 | None:intergenic | 20.0% |
| !!! | ATTACTTTTATCTGTCATTT+TGG | - | chr2.4:67235598-67235617 | MS.gene004405:intron | 20.0% |
| !!! | CCAAAACAATTTTTTTTTAC+AGG | - | chr2.4:67236462-67236481 | MS.gene004405:intron | 20.0% |
| !!! | CCTGTAAAAAAAAATTGTTT+TGG | + | chr2.4:67236465-67236484 | None:intergenic | 20.0% |
| !!! | GATTTCAATTTTTGGAATTT+TGG | + | chr2.4:67235845-67235864 | None:intergenic | 20.0% |
| !!! | TTGATTTTGGTATATATATG+AGG | - | chr2.4:67234460-67234479 | MS.gene004405:intron | 20.0% |
| !!! | TTTTGATTAAGCATTTAAAC+TGG | - | chr2.4:67235788-67235807 | MS.gene004405:intron | 20.0% |
| ! | AACAAAACAATAAGGGTTAA+TGG | - | chr2.4:67236256-67236275 | MS.gene004405:intron | 25.0% |
| ! | ACTATAAATAACAGTCTTTG+AGG | + | chr2.4:67235493-67235512 | None:intergenic | 25.0% |
| ! | CAGCAACATTAATTATTGTT+TGG | + | chr2.4:67236558-67236577 | None:intergenic | 25.0% |
| ! | CTATAAATAACAGTCTTTGA+GGG | + | chr2.4:67235492-67235511 | None:intergenic | 25.0% |
| ! | GAAGATGATGTATAATCAAA+GGG | + | chr2.4:67234318-67234337 | None:intergenic | 25.0% |
| ! | GATAATATGATATGTATTGC+AGG | - | chr2.4:67234279-67234298 | MS.gene004405:intron | 25.0% |
| ! | GATTATGGAATGTATATTGT+TGG | - | chr2.4:67235090-67235109 | MS.gene004405:intron | 25.0% |
| ! | GTCTTAAAATGACAACTAAA+AGG | + | chr2.4:67236014-67236033 | None:intergenic | 25.0% |
| ! | TATGTTGAGGTAAAAATACT+TGG | - | chr2.4:67235643-67235662 | MS.gene004405:intron | 25.0% |
| ! | TCTCTGTAATAACTAACTAA+GGG | - | chr2.4:67236129-67236148 | MS.gene004405:CDS | 25.0% |
| ! | TGATAATATGGAAACCTATA+TGG | - | chr2.4:67235521-67235540 | MS.gene004405:CDS | 25.0% |
| ! | TTGGTATATATATGAGGTAA+TGG | - | chr2.4:67234466-67234485 | MS.gene004405:intron | 25.0% |
| !! | ACTGCAATGATTTCAATTTT+TGG | + | chr2.4:67235853-67235872 | None:intergenic | 25.0% |
| !! | AGACTGTTATTTATAGTCAA+TGG | - | chr2.4:67235496-67235515 | MS.gene004405:CDS | 25.0% |
| !! | ATTTTTGAATGACCTATTAG+GGG | + | chr2.4:67236388-67236407 | None:intergenic | 25.0% |
| !! | CATTTTTGAATGACCTATTA+GGG | + | chr2.4:67236389-67236408 | None:intergenic | 25.0% |
| !! | GATTTGTTTATCTACAACTA+AGG | - | chr2.4:67234040-67234059 | MS.gene004405:intron | 25.0% |
| !! | GCAAGTTGAACATTAAATTT+GGG | - | chr2.4:67233658-67233677 | MS.gene004405:CDS | 25.0% |
| !! | TTTTTATGCGTAAAGATTTG+AGG | - | chr2.4:67234717-67234736 | MS.gene004405:intron | 25.0% |
| !!! | AATTTCTTTTGTTGTCTGAA+TGG | - | chr2.4:67235115-67235134 | MS.gene004405:intron | 25.0% |
| !!! | CTAACTAAGGGTAATTTTTT+TGG | - | chr2.4:67236141-67236160 | MS.gene004405:CDS | 25.0% |
| !!! | TAAATGAGTAAAGGTACTAT+AGG | + | chr2.4:67236089-67236108 | None:intergenic | 25.0% |
| !!! | TAGTCAATGGATTGATAATA+TGG | - | chr2.4:67235509-67235528 | MS.gene004405:CDS | 25.0% |
| !!! | TCATTTTTGAATGACCTATT+AGG | + | chr2.4:67236390-67236409 | None:intergenic | 25.0% |
| AAATGACAACTAAAAGGGAA+CGG | + | chr2.4:67236008-67236027 | None:intergenic | 30.0% | |
| AACATAGACAAAACTCAGAA+TGG | + | chr2.4:67235629-67235648 | None:intergenic | 30.0% | |
| AGATAAACAAATCAGCAAGT+TGG | + | chr2.4:67234033-67234052 | None:intergenic | 30.0% | |
| AGTCAATGACCTACTATTAT+AGG | + | chr2.4:67236294-67236313 | None:intergenic | 30.0% | |
| AGTTGAACATTAAATTTGGG+AGG | - | chr2.4:67233661-67233680 | MS.gene004405:CDS | 30.0% | |
| ATAGATAGTGTACCTTCATT+AGG | + | chr2.4:67233774-67233793 | None:intergenic | 30.0% | |
| ATCAACTCCTAGTAAACAAA+AGG | - | chr2.4:67236992-67237011 | MS.gene004405:CDS | 30.0% | |
| ATTGCATTATCAATTGCGTA+TGG | - | chr2.4:67235068-67235087 | MS.gene004405:intron | 30.0% | |
| CAAGATTATAGTGAAAGTGA+AGG | + | chr2.4:67235755-67235774 | None:intergenic | 30.0% | |
| CTCTCTGTAATAACTAACTA+AGG | - | chr2.4:67236128-67236147 | MS.gene004405:CDS | 30.0% | |
| CTTAACACCAAACACAAAAT+GGG | + | chr2.4:67234797-67234816 | None:intergenic | 30.0% | |
| CTTCACTTTCACTATAATCT+TGG | - | chr2.4:67235753-67235772 | MS.gene004405:intron | 30.0% | |
| GAATGTCTTCTAAACAGAAT+GGG | + | chr2.4:67235938-67235957 | None:intergenic | 30.0% | |
| GATAAACAAATCAGCAAGTT+GGG | + | chr2.4:67234032-67234051 | None:intergenic | 30.0% | |
| GGAAAACAAAATCAATCAGA+TGG | - | chr2.4:67235240-67235259 | MS.gene004405:intron | 30.0% | |
| GGAAGATGATGTATAATCAA+AGG | + | chr2.4:67234319-67234338 | None:intergenic | 30.0% | |
| GTCAATGACCTACTATTATA+GGG | + | chr2.4:67236293-67236312 | None:intergenic | 30.0% | |
| GTTATTACAGAGAGAATTGA+TGG | + | chr2.4:67236122-67236141 | None:intergenic | 30.0% | |
| GTTGAACATTAAATTTGGGA+GGG | - | chr2.4:67233662-67233681 | MS.gene004405:CDS | 30.0% | |
| TAAACAAAAGGATTCAAGAC+AGG | - | chr2.4:67237004-67237023 | MS.gene004405:CDS | 30.0% | |
| TAATAATTTACAGGGGAAAC+CGG | + | chr2.4:67236322-67236341 | None:intergenic | 30.0% | |
| TCAATGACCTACTATTATAG+GGG | + | chr2.4:67236292-67236311 | None:intergenic | 30.0% | |
| TGAATGTCTTCTAAACAGAA+TGG | + | chr2.4:67235939-67235958 | None:intergenic | 30.0% | |
| TGCATAATATATGCAATGTC+CGG | + | chr2.4:67236187-67236206 | None:intergenic | 30.0% | |
| TGTACTATTGTAAAATGAGC+AGG | - | chr2.4:67236966-67236985 | MS.gene004405:CDS | 30.0% | |
| TTCATTGCTGAAAAATCCAA+AGG | + | chr2.4:67234353-67234372 | None:intergenic | 30.0% | |
| TTGAAATCATTGCAGTACTA+AGG | - | chr2.4:67235857-67235876 | MS.gene004405:intron | 30.0% | |
| TTGACATGTTTATGCCATAT+AGG | + | chr2.4:67235538-67235557 | None:intergenic | 30.0% | |
| TTTATGGCTGTGAAAAGTAA+TGG | + | chr2.4:67236694-67236713 | None:intergenic | 30.0% | |
| TTTCAGCAATGAAAATCTTG+TGG | - | chr2.4:67234360-67234379 | MS.gene004405:intron | 30.0% | |
| ! | AATTTTACCCTCGGTAATAT+AGG | + | chr2.4:67236532-67236551 | None:intergenic | 30.0% |
| ! | ATACATGCCTTTCTTGATTT+TGG | - | chr2.4:67234447-67234466 | MS.gene004405:intron | 30.0% |
| ! | CGCAAGTTGAACATTAAATT+TGG | - | chr2.4:67233657-67233676 | MS.gene004405:CDS | 30.0% |
| ! | GATTTTATATGATGCTCTCT+AGG | - | chr2.4:67234495-67234514 | MS.gene004405:intron | 30.0% |
| ! | GGAAGCTCAAAGAATTTTAT+CGG | - | chr2.4:67235369-67235388 | MS.gene004405:CDS | 30.0% |
| ! | GGTTTTTGAATGACCTATTA+GGG | - | chr2.4:67236433-67236452 | MS.gene004405:intron | 30.0% |
| ! | GTTTTTGAATGACCTATTAG+GGG | - | chr2.4:67236434-67236453 | MS.gene004405:intron | 30.0% |
| ! | TATCAATTGCGTATGGATTA+TGG | - | chr2.4:67235075-67235094 | MS.gene004405:intron | 30.0% |
| ! | TGAAAAGCACAACAATGAAA+GGG | - | chr2.4:67235146-67235165 | MS.gene004405:intron | 30.0% |
| ! | TGGTTTTTGAATGACCTATT+AGG | - | chr2.4:67236432-67236451 | MS.gene004405:intron | 30.0% |
| ! | TTGAAAAGCACAACAATGAA+AGG | - | chr2.4:67235145-67235164 | MS.gene004405:intron | 30.0% |
| ! | TTTTTGAATGACCTATTAGG+GGG | - | chr2.4:67236435-67236454 | MS.gene004405:intron | 30.0% |
| ! | TTTTTGAATGACCTATTAGG+GGG | + | chr2.4:67236454-67236435 | None:intergenic | 30.0% |
| !! | CTTGAATCCTTTTGTTTACT+AGG | + | chr2.4:67237002-67237021 | None:intergenic | 30.0% |
| !!! | ACTAAGGGTAATTTTTTTGG+TGG | - | chr2.4:67236144-67236163 | MS.gene004405:CDS | 30.0% |
| AAAATTTACAGAGGGGAAAC+CGG | - | chr2.4:67236500-67236519 | MS.gene004405:intron | 35.0% | |
| AATGACCTACTATTATAGGG+GGG | + | chr2.4:67236290-67236309 | None:intergenic | 35.0% | |
| ACAGAGAGAATTGATGGAAT+AGG | + | chr2.4:67236116-67236135 | None:intergenic | 35.0% | |
| ACCTGGTTCATTATTCTACA+AGG | - | chr2.4:67236719-67236738 | MS.gene004405:intron | 35.0% | |
| ACTCACTGCATCATTTATCT+TGG | + | chr2.4:67234692-67234711 | None:intergenic | 35.0% | |
| ACTGCAACACTTAATGCAAA+TGG | - | chr2.4:67234565-67234584 | MS.gene004405:intron | 35.0% | |
| ATATGATGCTCTCTAGGTAT+TGG | - | chr2.4:67234501-67234520 | MS.gene004405:intron | 35.0% | |
| ATTAAATTTGGGAGGGATGA+TGG | - | chr2.4:67233669-67233688 | MS.gene004405:CDS | 35.0% | |
| ATTTCATTTCTGCGTTTGGT+TGG | - | chr2.4:67236789-67236808 | MS.gene004405:CDS | 35.0% | |
| CAATCAGATGGTGATAAAGA+AGG | - | chr2.4:67235252-67235271 | MS.gene004405:intron | 35.0% | |
| CAATGACCTACTATTATAGG+GGG | + | chr2.4:67236291-67236310 | None:intergenic | 35.0% | |
| CATAATATATGCAATGTCCG+GGG | + | chr2.4:67236185-67236204 | None:intergenic | 35.0% | |
| CATATTATCGATAACTGCTG+CGG | + | chr2.4:67234268-67234287 | None:intergenic | 35.0% | |
| CGGAAGCTAAATAGAAAACA+GGG | + | chr2.4:67234248-67234267 | None:intergenic | 35.0% | |
| GAAAGGCGAGACAAATTTAA+TGG | - | chr2.4:67235299-67235318 | MS.gene004405:intron | 35.0% | |
| GAAATGACCTATATTACCGA+GGG | - | chr2.4:67236522-67236541 | MS.gene004405:intron | 35.0% | |
| GAATTGACACAATCTGAGTA+GGG | + | chr2.4:67235688-67235707 | None:intergenic | 35.0% | |
| GACAACGAAAAAGGAACAAA+GGG | - | chr2.4:67236639-67236658 | MS.gene004405:intron | 35.0% | |
| GCATAATATATGCAATGTCC+GGG | + | chr2.4:67236186-67236205 | None:intergenic | 35.0% | |
| GCTTAACACCAAACACAAAA+TGG | + | chr2.4:67234798-67234817 | None:intergenic | 35.0% | |
| GGAAGCTAAATAGAAAACAG+GGG | + | chr2.4:67234247-67234266 | None:intergenic | 35.0% | |
| TAATGAAGGTAAGACTCTGA+AGG | - | chr2.4:67237106-67237125 | MS.gene004405:CDS | 35.0% | |
| TACAAAGATAGGCCTAATGA+AGG | - | chr2.4:67233759-67233778 | MS.gene004405:intron | 35.0% | |
| TATAATGCGTCCTAACTCAA+CGG | + | chr2.4:67233859-67233878 | None:intergenic | 35.0% | |
| TCATTAGGCCTATCTTTGTA+AGG | + | chr2.4:67233759-67233778 | None:intergenic | 35.0% | |
| TCCTTGTAGAATAATGAACC+AGG | + | chr2.4:67236723-67236742 | None:intergenic | 35.0% | |
| TCGGTAATATAGGTCATTTC+CGG | + | chr2.4:67236522-67236541 | None:intergenic | 35.0% | |
| TCTTCTGCTTATAAGTCTTC+TGG | - | chr2.4:67234853-67234872 | MS.gene004405:intron | 35.0% | |
| TGAATTGACACAATCTGAGT+AGG | + | chr2.4:67235689-67235708 | None:intergenic | 35.0% | |
| TGATGTATAATCAAAGGGAG+TGG | + | chr2.4:67234313-67234332 | None:intergenic | 35.0% | |
| TTAAATTTGGGAGGGATGAT+GGG | - | chr2.4:67233670-67233689 | MS.gene004405:CDS | 35.0% | |
| TTCAAATGCGACAACGAAAA+AGG | - | chr2.4:67236630-67236649 | MS.gene004405:intron | 35.0% | |
| ! | AAACTTGCTCATGTTAAAGC+TGG | - | chr2.4:67234655-67234674 | MS.gene004405:intron | 35.0% |
| ! | AGAGATTAGCTAATTGTTGG+CGG | - | chr2.4:67233553-67233572 | MS.gene004405:CDS | 35.0% |
| ! | AGCAGAGATTAGCTAATTGT+TGG | - | chr2.4:67233550-67233569 | MS.gene004405:CDS | 35.0% |
| ! | AGCTCAAAGAATTTTATCGG+TGG | - | chr2.4:67235372-67235391 | MS.gene004405:CDS | 35.0% |
| ! | ATCATCTCCCATTTTGTGTT+TGG | - | chr2.4:67234787-67234806 | MS.gene004405:intron | 35.0% |
| ! | ATGAACCAGGTTGAGATTTA+TGG | + | chr2.4:67236710-67236729 | None:intergenic | 35.0% |
| ! | GTTGATTTCATTTCTGCGTT+TGG | - | chr2.4:67236785-67236804 | MS.gene004405:CDS | 35.0% |
| ! | TTTGATAGTCTAGCTGTTTC+TGG | - | chr2.4:67235465-67235484 | MS.gene004405:CDS | 35.0% |
| ! | TTTGTTGTCTGAATGGATGT+AGG | - | chr2.4:67235122-67235141 | MS.gene004405:intron | 35.0% |
| ! | TTTTTCTTCCGCTTGTTCTT+GGG | + | chr2.4:67237143-67237162 | None:intergenic | 35.0% |
| !! | GTTTGGGTTAATTTTACCCT+CGG | + | chr2.4:67236541-67236560 | None:intergenic | 35.0% |
| !! | TCTGAGTTTTGTCTATGTTG+AGG | - | chr2.4:67235630-67235649 | MS.gene004405:intron | 35.0% |
| !!! | GAGGGAGTATTGTTTTACAT+GGG | + | chr2.4:67235986-67236005 | None:intergenic | 35.0% |
| !!! | GTAATTTTTTTGGTGGTGTC+CGG | - | chr2.4:67236151-67236170 | MS.gene004405:CDS | 35.0% |
| !!! | TAATTTTTTTGGTGGTGTCC+GGG | - | chr2.4:67236152-67236171 | MS.gene004405:CDS | 35.0% |
| !!! | TTTTTTCTTCCGCTTGTTCT+TGG | + | chr2.4:67237144-67237163 | None:intergenic | 35.0% |
| AAATAGAAAACAGGGGCGAA+AGG | + | chr2.4:67234240-67234259 | None:intergenic | 40.0% | |
| AAGCTCTTGGAGACAACTAA+GGG | - | chr2.4:67236227-67236246 | MS.gene004405:intron | 40.0% | |
| AGATGCATCGTTCTGTTCAT+AGG | + | chr2.4:67234760-67234779 | None:intergenic | 40.0% | |
| ATCCACATACTAGACAATGC+AGG | - | chr2.4:67233966-67233985 | MS.gene004405:intron | 40.0% | |
| ATGACCTACTATTATAGGGG+GGG | + | chr2.4:67236289-67236308 | None:intergenic | 40.0% | |
| CACTCTATTTAGCTGCACTT+AGG | - | chr2.4:67235812-67235831 | MS.gene004405:intron | 40.0% | |
| CGACAACGAAAAAGGAACAA+AGG | - | chr2.4:67236638-67236657 | MS.gene004405:intron | 40.0% | |
| GAACAAAGGGAGTAATGTAG+AGG | - | chr2.4:67236652-67236671 | MS.gene004405:intron | 40.0% | |
| GAATGTGATGCCACATCATT+AGG | - | chr2.4:67235321-67235340 | MS.gene004405:intron | 40.0% | |
| GCGGAAGCTAAATAGAAAAC+AGG | + | chr2.4:67234249-67234268 | None:intergenic | 40.0% | |
| GGAAATGACCTATATTACCG+AGG | - | chr2.4:67236521-67236540 | MS.gene004405:intron | 40.0% | |
| TAAGCTCTTGGAGACAACTA+AGG | - | chr2.4:67236226-67236245 | MS.gene004405:intron | 40.0% | |
| TACCAACTGAGTTAAGCTCT+TGG | - | chr2.4:67236214-67236233 | MS.gene004405:intron | 40.0% | |
| TATGTGGATGTCAATGCGAA+TGG | + | chr2.4:67233955-67233974 | None:intergenic | 40.0% | |
| TCCACATACTAGACAATGCA+GGG | - | chr2.4:67233967-67233986 | MS.gene004405:intron | 40.0% | |
| TCTTTCTGCCAAACTTGTCT+GGG | - | chr2.4:67233929-67233948 | MS.gene004405:intron | 40.0% | |
| TGCAATGAAAGGCAAACAGA+AGG | + | chr2.4:67234914-67234933 | None:intergenic | 40.0% | |
| TGCTGCAAATATTGCTGCAT+TGG | - | chr2.4:67234107-67234126 | MS.gene004405:intron | 40.0% | |
| TGTCTTCTAAACAGAATGGG+TGG | + | chr2.4:67235935-67235954 | None:intergenic | 40.0% | |
| TGTGTGCAATTCAAAAGCCT+GGG | - | chr2.4:67234593-67234612 | MS.gene004405:intron | 40.0% | |
| TTCAACTTGCGATAGTCCAA+GGG | + | chr2.4:67233648-67233667 | None:intergenic | 40.0% | |
| TTCTTTCTGCCAAACTTGTC+TGG | - | chr2.4:67233928-67233947 | MS.gene004405:intron | 40.0% | |
| TTGTGCAGCCTTACAAAGAT+AGG | - | chr2.4:67233748-67233767 | MS.gene004405:intron | 40.0% | |
| TTTACCCCCCCTATAATAGT+AGG | - | chr2.4:67236282-67236301 | MS.gene004405:intron | 40.0% | |
| ! | ACTTGGTCTTTCACTTCTCA+GGG | - | chr2.4:67235660-67235679 | MS.gene004405:intron | 40.0% |
| ! | AGAGCTTAACTCAGTTGGTA+AGG | + | chr2.4:67236214-67236233 | None:intergenic | 40.0% |
| ! | CATCTCTGAAGACATTCAGA+AGG | - | chr2.4:67234130-67234149 | MS.gene004405:intron | 40.0% |
| ! | CGTGAGGTTTTCGTTTAGAT+AGG | - | chr2.4:67236746-67236765 | MS.gene004405:CDS | 40.0% |
| ! | TACTTGGTCTTTCACTTCTC+AGG | - | chr2.4:67235659-67235678 | MS.gene004405:intron | 40.0% |
| !! | CATAGGCATTGAAAGAGTGA+GGG | + | chr2.4:67234743-67234762 | None:intergenic | 40.0% |
| !! | GTAGGTCATTGACTCATTTC+CGG | - | chr2.4:67236300-67236319 | MS.gene004405:intron | 40.0% |
| !! | TCATAGGCATTGAAAGAGTG+AGG | + | chr2.4:67234744-67234763 | None:intergenic | 40.0% |
| !!! | AATTTTTTTGGTGGTGTCCG+GGG | - | chr2.4:67236153-67236172 | MS.gene004405:CDS | 40.0% |
| !!! | ATTTTGTTTTCCCCCTAACG+TGG | + | chr2.4:67235232-67235251 | None:intergenic | 40.0% |
| !!! | GGAGGGAGTATTGTTTTACA+TGG | + | chr2.4:67235987-67236006 | None:intergenic | 40.0% |
| !!! | GTTTTGGAATACCCCCTAAT+AGG | - | chr2.4:67236373-67236392 | MS.gene004405:CDS | 40.0% |
| !!! | GTTTTGGAATACCCCCTAAT+AGG | + | chr2.4:67236392-67236373 | None:intergenic | 40.0% |
| AAGGTCACGCTGTTAAACTG+AGG | + | chr2.4:67234221-67234240 | None:intergenic | 45.0% | |
| AATCCAAAGGTGACTGCAAC+TGG | + | chr2.4:67234340-67234359 | None:intergenic | 45.0% | |
| ACAAGTGCAGAGTAGCAAGA+AGG | - | chr2.4:67235344-67235363 | MS.gene004405:CDS | 45.0% | |
| ACAGCCTCTTCATGGTATGT+CGG | + | chr2.4:67234529-67234548 | None:intergenic | 45.0% | |
| ACCCTGCATTGTCTAGTATG+TGG | + | chr2.4:67233971-67233990 | None:intergenic | 45.0% | |
| ACGACATTCTTCCTCTGTTG+CGG | - | chr2.4:67235185-67235204 | MS.gene004405:intron | 45.0% | |
| ATTGACACTGCTCTAACTGC+TGG | - | chr2.4:67237077-67237096 | MS.gene004405:CDS | 45.0% | |
| CACAGCCATAAATCTCAACC+TGG | - | chr2.4:67236702-67236721 | MS.gene004405:intron | 45.0% | |
| CAGTCATTACAGCCTCTTCA+TGG | + | chr2.4:67234537-67234556 | None:intergenic | 45.0% | |
| CATGAAGAGGCTGTAATGAC+TGG | - | chr2.4:67234535-67234554 | MS.gene004405:intron | 45.0% | |
| CATTATAGACCGCGGTTTAC+GGG | - | chr2.4:67233872-67233891 | MS.gene004405:intron | 45.0% | |
| CTAGACCAGTTGAAGCTGAA+AGG | - | chr2.4:67235282-67235301 | MS.gene004405:intron | 45.0% | |
| CTCCAAGAGCTTAACTCAGT+TGG | + | chr2.4:67236219-67236238 | None:intergenic | 45.0% | |
| CTGCACTTGTCCTAATGATG+TGG | + | chr2.4:67235334-67235353 | None:intergenic | 45.0% | |
| CTTCACTGAATTCTCTCCCA+TGG | - | chr2.4:67233794-67233813 | MS.gene004405:intron | 45.0% | |
| GACAACTAAAAGGGAACGGA+GGG | + | chr2.4:67236004-67236023 | None:intergenic | 45.0% | |
| GCACACTTCACTGCAATGAA+AGG | + | chr2.4:67234925-67234944 | None:intergenic | 45.0% | |
| GCAGTTAGAGCAGTGTCAAT+TGG | + | chr2.4:67237077-67237096 | None:intergenic | 45.0% | |
| GCATTATAGACCGCGGTTTA+CGG | - | chr2.4:67233871-67233890 | MS.gene004405:intron | 45.0% | |
| GTGTGCAATTCAAAAGCCTG+GGG | - | chr2.4:67234594-67234613 | MS.gene004405:intron | 45.0% | |
| GTGTGTGCAATTCAAAAGCC+TGG | - | chr2.4:67234592-67234611 | MS.gene004405:intron | 45.0% | |
| GTTCAACTTGCGATAGTCCA+AGG | + | chr2.4:67233649-67233668 | None:intergenic | 45.0% | |
| TCAAAGGAAGGATCAGCCAT+GGG | + | chr2.4:67233813-67233832 | None:intergenic | 45.0% | |
| TCAACTTGCGATAGTCCAAG+GGG | + | chr2.4:67233647-67233666 | None:intergenic | 45.0% | |
| TCTTCTATCAGAGCTTCGAG+TGG | - | chr2.4:67233611-67233630 | MS.gene004405:CDS | 45.0% | |
| TGACAACTAAAAGGGAACGG+AGG | + | chr2.4:67236005-67236024 | None:intergenic | 45.0% | |
| TGTGCAATTCAAAAGCCTGG+GGG | - | chr2.4:67234595-67234614 | MS.gene004405:intron | 45.0% | |
| TTAGGACGCATTATAGACCG+CGG | - | chr2.4:67233864-67233883 | MS.gene004405:intron | 45.0% | |
| TTGACACTGCTCTAACTGCT+GGG | - | chr2.4:67237078-67237097 | MS.gene004405:CDS | 45.0% | |
| ! | AAAGCTTCTCTAGCTTCTCG+TGG | - | chr2.4:67235718-67235737 | MS.gene004405:intron | 45.0% |
| ! | CAGCAAGTTGGGTAAGAAAG+AGG | + | chr2.4:67234021-67234040 | None:intergenic | 45.0% |
| ! | TATTCTACAAGGAGTGCGTG+AGG | - | chr2.4:67236730-67236749 | MS.gene004405:intron | 45.0% |
| !! | AATAAAAAATAATAATTTAC+AGG | + | chr2.4:67236331-67236350 | None:intergenic | 5.0% |
| !! | ATAAAAAATAATAATTTACA+GGG | + | chr2.4:67236330-67236349 | None:intergenic | 5.0% |
| AAACTGAGGAAGCTGACCTC+AGG | + | chr2.4:67234207-67234226 | None:intergenic | 50.0% | |
| AACTCAACGGCAGATTCTCC+AGG | + | chr2.4:67233846-67233865 | None:intergenic | 50.0% | |
| ACATACATCCACCGCAACAG+AGG | + | chr2.4:67235199-67235218 | None:intergenic | 50.0% | |
| ACATTCTTCCTCTGTTGCGG+TGG | - | chr2.4:67235188-67235207 | MS.gene004405:intron | 50.0% | |
| ACTGACACCTTACCAGCTTG+AGG | + | chr2.4:67235400-67235419 | None:intergenic | 50.0% | |
| ACTGCTGGGCAGAGTAATGA+AGG | - | chr2.4:67237092-67237111 | MS.gene004405:CDS | 50.0% | |
| ACTGTCTTGATTTCCTGCGC+TGG | + | chr2.4:67237047-67237066 | None:intergenic | 50.0% | |
| AGAAGGCCTGAATGCTCGTT+GGG | - | chr2.4:67234147-67234166 | MS.gene004405:intron | 50.0% | |
| AGAGAGAGAGAGAGAGAGAG+AGG | + | chr2.4:67234412-67234431 | None:intergenic | 50.0% | |
| AGAGAGAGAGAGAGAGAGAG+GGG | + | chr2.4:67234412-67234431 | None:intergenic | 50.0% | |
| AGTTGTAGTGCATCCTCCTG+AGG | - | chr2.4:67234188-67234207 | MS.gene004405:intron | 50.0% | |
| CTATCAGAGCTTCGAGTGGA+TGG | - | chr2.4:67233615-67233634 | MS.gene004405:CDS | 50.0% | |
| CTCAAAGGAAGGATCAGCCA+TGG | + | chr2.4:67233814-67233833 | None:intergenic | 50.0% | |
| CTCTACTTTCCCGTAAACCG+CGG | + | chr2.4:67233884-67233903 | None:intergenic | 50.0% | |
| CTGACACCTTACCAGCTTGA+GGG | + | chr2.4:67235399-67235418 | None:intergenic | 50.0% | |
| CTGTCAAGCCCAAGAACAAG+CGG | - | chr2.4:67237132-67237151 | MS.gene004405:CDS | 50.0% | |
| CTTCCAGTTGCAGTCACCTT+TGG | - | chr2.4:67234334-67234353 | MS.gene004405:intron | 50.0% | |
| GAGAGAGAGAGAGAGAGAGA+GGG | + | chr2.4:67234413-67234432 | None:intergenic | 50.0% | |
| GCAGAGCGATTCAGTGTCAA+TGG | + | chr2.4:67233907-67233926 | None:intergenic | 50.0% | |
| GGAGAATCTGCCGTTGAGTT+AGG | - | chr2.4:67233846-67233865 | MS.gene004405:intron | 50.0% | |
| GGATCCGACATACCATGAAG+AGG | - | chr2.4:67234522-67234541 | MS.gene004405:intron | 50.0% | |
| GTGCAATTCAAAAGCCTGGG+GGG | - | chr2.4:67234596-67234615 | MS.gene004405:intron | 50.0% | |
| GTGCAGAGTAGCAAGAAGGA+TGG | - | chr2.4:67235348-67235367 | MS.gene004405:CDS | 50.0% | |
| TCTCGCCTTTCAGCTTCAAC+TGG | + | chr2.4:67235290-67235309 | None:intergenic | 50.0% | |
| TCTGTTGCGGTGGATGTATG+TGG | - | chr2.4:67235198-67235217 | MS.gene004405:intron | 50.0% | |
| TGACACCTTACCAGCTTGAG+GGG | + | chr2.4:67235398-67235417 | None:intergenic | 50.0% | |
| TGTCTCGCCCAATTGGATCT+CGG | + | chr2.4:67233700-67233719 | None:intergenic | 50.0% | |
| !! | ATTTCCTGCGCTGGTTCTTC+TGG | + | chr2.4:67237038-67237057 | None:intergenic | 50.0% |
| AAGGCCTGAATGCTCGTTGG+GGG | - | chr2.4:67234149-67234168 | MS.gene004405:intron | 55.0% | |
| AATTCAAAAGCCTGGGGGGC+AGG | - | chr2.4:67234600-67234619 | MS.gene004405:intron | 55.0% | |
| AGAGCTTCGAGTGGATGGTC+GGG | - | chr2.4:67233620-67233639 | MS.gene004405:CDS | 55.0% | |
| ATTCAAAAGCCTGGGGGGCA+GGG | - | chr2.4:67234601-67234620 | MS.gene004405:intron | 55.0% | |
| CAACGGCAGATTCTCCAGGA+TGG | + | chr2.4:67233842-67233861 | None:intergenic | 55.0% | |
| CAGAAGGCCTGAATGCTCGT+TGG | - | chr2.4:67234146-67234165 | MS.gene004405:intron | 55.0% | |
| CAGAGCTTCGAGTGGATGGT+CGG | - | chr2.4:67233619-67233638 | MS.gene004405:CDS | 55.0% | |
| GAAGGCCTGAATGCTCGTTG+GGG | - | chr2.4:67234148-67234167 | MS.gene004405:intron | 55.0% | |
| GAGAGAGAGAGAGAGAGAGG+GGG | + | chr2.4:67234411-67234430 | None:intergenic | 55.0% | |
| GCGAATGGCCCAGACAAGTT+TGG | + | chr2.4:67233940-67233959 | None:intergenic | 55.0% | |
| GCTGATCCTTCCTTTGAGCC+TGG | - | chr2.4:67233816-67233835 | MS.gene004405:intron | 55.0% | |
| GGGTCTGCCGAGATCCAATT+GGG | - | chr2.4:67233690-67233709 | MS.gene004405:CDS | 55.0% | |
| GTGGAACCACTGCCACGTTA+GGG | - | chr2.4:67235217-67235236 | MS.gene004405:intron | 55.0% | |
| TAAGCCAGAAGAACCAGCGC+AGG | - | chr2.4:67237031-67237050 | MS.gene004405:CDS | 55.0% | |
| TGACACGTGTCTCGCCCAAT+TGG | + | chr2.4:67233707-67233726 | None:intergenic | 55.0% | |
| TGGAACCACTGCCACGTTAG+GGG | - | chr2.4:67235218-67235237 | MS.gene004405:intron | 55.0% | |
| TGGGTCTGCCGAGATCCAAT+TGG | - | chr2.4:67233689-67233708 | MS.gene004405:CDS | 55.0% | |
| TGTGGAACCACTGCCACGTT+AGG | - | chr2.4:67235216-67235235 | MS.gene004405:intron | 55.0% | |
| ! | TTTTCCCCCTAACGTGGCAG+TGG | + | chr2.4:67235226-67235245 | None:intergenic | 55.0% |
| AATGTCCGGGGTTCGAACCC+CGG | + | chr2.4:67236173-67236192 | None:intergenic | 60.0% | |
| AGAGAGAGAGAGAGGGGGAG+AGG | + | chr2.4:67234406-67234425 | None:intergenic | 60.0% | |
| AGGCCTGAATGCTCGTTGGG+GGG | - | chr2.4:67234150-67234169 | MS.gene004405:intron | 60.0% | |
| CTGAGGAAGCTGACCTCAGG+AGG | + | chr2.4:67234204-67234223 | None:intergenic | 60.0% | |
| GAGAGAGAGAGAGGGGGAGA+GGG | + | chr2.4:67234405-67234424 | None:intergenic | 60.0% | |
| GAGCTTCGAGTGGATGGTCG+GGG | - | chr2.4:67233621-67233640 | MS.gene004405:CDS | 60.0% | |
| GCAGATTCTCCAGGATGGCC+AGG | + | chr2.4:67233837-67233856 | None:intergenic | 60.0% | |
| GGAACCACTGCCACGTTAGG+GGG | - | chr2.4:67235219-67235238 | MS.gene004405:intron | 60.0% | |
| GGATGGCCAGGCTCAAAGGA+AGG | + | chr2.4:67233825-67233844 | None:intergenic | 60.0% | |
| TCCAGGATGGCCAGGCTCAA+AGG | + | chr2.4:67233829-67233848 | None:intergenic | 60.0% | |
| TCCTTTGAGCCTGGCCATCC+TGG | - | chr2.4:67233825-67233844 | MS.gene004405:intron | 60.0% | |
| TCTCCCCCCAACGAGCATTC+AGG | + | chr2.4:67234156-67234175 | None:intergenic | 60.0% | |
| TGAATGCTCGTTGGGGGGAG+AGG | - | chr2.4:67234155-67234174 | MS.gene004405:intron | 60.0% | |
| TTATCGGTGGCCCCTCAAGC+TGG | - | chr2.4:67235385-67235404 | MS.gene004405:CDS | 60.0% | |
| AGAGAGAGAGGGGGAGAGGG+AGG | + | chr2.4:67234402-67234421 | None:intergenic | 65.0% | |
| GAGAGAGAGGGGGAGAGGGA+GGG | + | chr2.4:67234401-67234420 | None:intergenic | 65.0% | |
| GGTGGCCCCTCAAGCTGGTA+AGG | - | chr2.4:67235390-67235409 | MS.gene004405:CDS | 65.0% | |
| TGAAAGACACCCTGCCCCCC+AGG | + | chr2.4:67234613-67234632 | None:intergenic | 65.0% | |
| TGCTCGTTGGGGGGAGAGGA+TGG | - | chr2.4:67234159-67234178 | MS.gene004405:intron | 65.0% | |
| AGTGGATGGTCGGGGCCCCT+TGG | - | chr2.4:67233629-67233648 | MS.gene004405:CDS | 70.0% | |
| GGTGTCCGGGGTTCGAACCC+CGG | - | chr2.4:67236165-67236184 | MS.gene004405:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2.4 | gene | 67233546 | 67237187 | 67233546 | ID=MS.gene004405 |
| chr2.4 | mRNA | 67233546 | 67237187 | 67233546 | ID=MS.gene004405.t1;Parent=MS.gene004405 |
| chr2.4 | exon | 67236745 | 67237187 | 67236745 | ID=MS.gene004405.t1.exon1;Parent=MS.gene004405.t1 |
| chr2.4 | CDS | 67236745 | 67237187 | 67236745 | ID=cds.MS.gene004405.t1;Parent=MS.gene004405.t1 |
| chr2.4 | exon | 67236524 | 67236638 | 67236524 | ID=MS.gene004405.t1.exon2;Parent=MS.gene004405.t1 |
| chr2.4 | CDS | 67236524 | 67236638 | 67236524 | ID=cds.MS.gene004405.t1;Parent=MS.gene004405.t1 |
| chr2.4 | exon | 67236352 | 67236432 | 67236352 | ID=MS.gene004405.t1.exon3;Parent=MS.gene004405.t1 |
| chr2.4 | CDS | 67236352 | 67236432 | 67236352 | ID=cds.MS.gene004405.t1;Parent=MS.gene004405.t1 |
| chr2.4 | exon | 67236028 | 67236216 | 67236028 | ID=MS.gene004405.t1.exon4;Parent=MS.gene004405.t1 |
| chr2.4 | CDS | 67236028 | 67236216 | 67236028 | ID=cds.MS.gene004405.t1;Parent=MS.gene004405.t1 |
| chr2.4 | exon | 67235327 | 67235589 | 67235327 | ID=MS.gene004405.t1.exon5;Parent=MS.gene004405.t1 |
| chr2.4 | CDS | 67235327 | 67235589 | 67235327 | ID=cds.MS.gene004405.t1;Parent=MS.gene004405.t1 |
| chr2.4 | exon | 67234994 | 67235052 | 67234994 | ID=MS.gene004405.t1.exon6;Parent=MS.gene004405.t1 |
| chr2.4 | CDS | 67234994 | 67235052 | 67234994 | ID=cds.MS.gene004405.t1;Parent=MS.gene004405.t1 |
| chr2.4 | exon | 67233546 | 67233745 | 67233546 | ID=MS.gene004405.t1.exon7;Parent=MS.gene004405.t1 |
| chr2.4 | CDS | 67233546 | 67233745 | 67233546 | ID=cds.MS.gene004405.t1;Parent=MS.gene004405.t1 |
| Gene Sequence |
| Protein sequence |
