Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene012007.t1 | XP_003629432.1 | 96.9 | 286 | 9 | 0 | 1 | 286 | 1 | 286 | 1.20E-148 | 535.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene012007.t1 | Q15024 | 36.3 | 281 | 174 | 2 | 2 | 282 | 4 | 279 | 1.4e-47 | 191.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene012007.t1 | G7LDZ3 | 96.9 | 286 | 9 | 0 | 1 | 286 | 1 | 286 | 8.8e-149 | 535.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene012007 | MS.gene54197 | PPI |
| MS.gene012007 | MS.gene050621 | PPI |
| MS.gene012007 | MS.gene025936 | PPI |
| MS.gene012007 | MS.gene21512 | PPI |
| MS.gene012007 | MS.gene002724 | PPI |
| MS.gene09700 | MS.gene012007 | PPI |
| MS.gene012007 | MS.gene015362 | PPI |
| MS.gene54196 | MS.gene012007 | PPI |
| MS.gene012007 | MS.gene004405 | PPI |
| MS.gene012007 | MS.gene22822 | PPI |
| MS.gene012007 | MS.gene024471 | PPI |
| MS.gene012007 | MS.gene015363 | PPI |
| MS.gene012007 | MS.gene09699 | PPI |
| MS.gene012007 | MS.gene96248 | PPI |
| MS.gene012007 | MS.gene05840 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene012007.t1 | MTR_8g077430 | 96.853 | 286 | 9 | 0 | 1 | 286 | 1 | 286 | 0.0 | 556 |
| MS.gene012007.t1 | MTR_1g031820 | 89.510 | 286 | 30 | 0 | 1 | 286 | 398 | 683 | 0.0 | 521 |
| MS.gene012007.t1 | MTR_8g077430 | 96.774 | 217 | 7 | 0 | 70 | 286 | 1 | 217 | 9.84e-151 | 420 |
| MS.gene012007.t1 | MTR_1g063090 | 31.481 | 270 | 161 | 9 | 4 | 265 | 11 | 264 | 1.68e-29 | 113 |
| MS.gene012007.t1 | MTR_2g019210 | 27.875 | 287 | 186 | 6 | 4 | 283 | 11 | 283 | 1.80e-27 | 109 |
| MS.gene012007.t1 | MTR_2g019210 | 27.875 | 287 | 186 | 6 | 4 | 283 | 11 | 283 | 7.53e-27 | 108 |
| MS.gene012007.t1 | MTR_1g007060 | 28.772 | 285 | 182 | 5 | 11 | 283 | 29 | 304 | 1.11e-21 | 92.8 |
| MS.gene012007.t1 | MTR_1g007060 | 28.685 | 251 | 159 | 4 | 11 | 250 | 29 | 270 | 4.93e-19 | 85.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene012007.t1 | AT3G07750 | 77.622 | 286 | 63 | 1 | 2 | 286 | 1 | 286 | 1.33e-164 | 458 |
| MS.gene012007.t1 | AT3G07750 | 77.622 | 286 | 63 | 1 | 2 | 286 | 1 | 286 | 1.33e-164 | 458 |
| MS.gene012007.t1 | AT3G12990 | 30.258 | 271 | 164 | 6 | 1 | 262 | 8 | 262 | 1.25e-25 | 103 |
| MS.gene012007.t1 | AT3G12990 | 30.258 | 271 | 164 | 6 | 1 | 262 | 8 | 262 | 1.42e-25 | 103 |
| MS.gene012007.t1 | AT3G12990 | 30.258 | 271 | 164 | 6 | 1 | 262 | 8 | 262 | 1.42e-25 | 103 |
| MS.gene012007.t1 | AT3G60500 | 29.811 | 265 | 173 | 6 | 1 | 262 | 8 | 262 | 7.37e-24 | 99.8 |
| MS.gene012007.t1 | AT3G60500 | 29.167 | 264 | 176 | 4 | 1 | 262 | 8 | 262 | 2.56e-23 | 99.0 |
| MS.gene012007.t1 | AT3G60500 | 29.167 | 264 | 176 | 4 | 1 | 262 | 8 | 262 | 2.56e-23 | 99.0 |
| MS.gene012007.t1 | AT3G60500 | 29.167 | 264 | 176 | 4 | 1 | 262 | 8 | 262 | 2.56e-23 | 99.0 |
| MS.gene012007.t1 | AT1G60080 | 29.091 | 275 | 170 | 5 | 11 | 269 | 27 | 292 | 1.99e-20 | 89.4 |
| MS.gene012007.t1 | AT3G12990 | 31.847 | 157 | 91 | 3 | 1 | 153 | 8 | 152 | 5.11e-17 | 78.6 |
Find 74 sgRNAs with CRISPR-Local
Find 332 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTCATTTGGGATTCCTCTTC+AGG | 0.203062 | 8.2:+28233402 | None:intergenic |
| TTAGTCAGTGTAACTATAAC+AGG | 0.272403 | 8.2:+28233531 | None:intergenic |
| TTGAAACTGCAGAGCTCATT+TGG | 0.276691 | 8.2:+28233388 | None:intergenic |
| CAGTTTCAATCTCTATTAAT+AGG | 0.278557 | 8.2:-28233374 | MS.gene012007:CDS |
| CCAGCAGCAATTTGAACCTT+TGG | 0.297088 | 8.2:+28233627 | None:intergenic |
| GGAATGGTAGGTTTATCTTT+AGG | 0.303553 | 8.2:-28237983 | MS.gene012007:CDS |
| CGAGCAGTTAATAAATAAAC+TGG | 0.327846 | 8.2:-28233259 | MS.gene012007:CDS |
| TCCAAGTGTCATTCTTGATA+TGG | 0.333896 | 8.2:-28233304 | MS.gene012007:CDS |
| TGCTCTTCAACCCTGTCTCT+TGG | 0.335925 | 8.2:-28234393 | MS.gene012007:CDS |
| TGTTGGGATCTTTATATTGA+TGG | 0.338440 | 8.2:-28234181 | MS.gene012007:CDS |
| GGAGAACAATGTTTCATAGA+AGG | 0.340868 | 8.2:-28237962 | MS.gene012007:CDS |
| CGACCTATCCTTGTTCAAAC+TGG | 0.354357 | 8.2:-28237890 | MS.gene012007:CDS |
| AACTTCTGGTTGCTCGTCAC+TGG | 0.375195 | 8.2:+28233599 | None:intergenic |
| ATCGAGACTTTCCCTTTGTC+AGG | 0.384869 | 8.2:+28236519 | None:intergenic |
| CAGCCCCGCACCTCCTCGTT+TGG | 0.387653 | 8.2:+28233329 | None:intergenic |
| GCTCTTCAACCCTGTCTCTT+GGG | 0.392541 | 8.2:-28234392 | MS.gene012007:CDS |
| TTTATGCAGTTTGACACATC+TGG | 0.392871 | 8.2:-28233558 | MS.gene012007:CDS |
| TCGTCACTTACGTCAACTTC+TGG | 0.393816 | 8.2:+28233585 | None:intergenic |
| GTTGGGATCTTTATATTGAT+GGG | 0.410239 | 8.2:-28234180 | MS.gene012007:CDS |
| ACGCAAGTGCAGGCTGAACT+TGG | 0.418822 | 8.2:-28236561 | MS.gene012007:intron |
| TGAAACTGCAGAGCTCATTT+GGG | 0.431150 | 8.2:+28233389 | None:intergenic |
| AATTTGAACCTTTGGAATAC+CGG | 0.443348 | 8.2:+28233635 | None:intergenic |
| CAAACGAGGAGGTGCGGGGC+TGG | 0.446204 | 8.2:-28233328 | MS.gene012007:CDS |
| CGCTCTAGGTGCTGCCATCA+AGG | 0.465933 | 8.2:-28234125 | MS.gene012007:intron |
| GTAACCAAACGAGGAGGTGC+GGG | 0.468324 | 8.2:-28233333 | MS.gene012007:CDS |
| TGAACTTCTTGATAGGCAAA+TGG | 0.474000 | 8.2:-28236758 | MS.gene012007:intron |
| GGGCTTGTTGTTAGTTCAGA+TGG | 0.475455 | 8.2:-28234160 | MS.gene012007:CDS |
| CCTCACTTGTTGTTGTTGAA+CGG | 0.479484 | 8.2:-28234210 | MS.gene012007:CDS |
| TTGTCAGGTTGCATCAAGCT+TGG | 0.482187 | 8.2:+28236534 | None:intergenic |
| CCAAAGGTTCAAATTGCTGC+TGG | 0.488677 | 8.2:-28233627 | MS.gene012007:CDS |
| TTGGTATGTATATAGGGTCG+AGG | 0.495673 | 8.2:-28234446 | MS.gene012007:intron |
| GGTTCGGCAAGAGTCAGAAT+TGG | 0.505552 | 8.2:-28236737 | MS.gene012007:CDS |
| TCAATCTCTATTAATAGGCA+AGG | 0.508961 | 8.2:-28233369 | MS.gene012007:CDS |
| TTGTTGAACGGAAAATTTGT+TGG | 0.509025 | 8.2:-28234198 | MS.gene012007:CDS |
| TGTTGAACGGAAAATTTGTT+GGG | 0.509776 | 8.2:-28234197 | MS.gene012007:CDS |
| TGTTATAGTTACACTGACTA+AGG | 0.511701 | 8.2:-28233529 | MS.gene012007:intron |
| TGTCTCTTGGGTGGTAAAAG+TGG | 0.512064 | 8.2:-28234380 | MS.gene012007:CDS |
| TTCTTGATAGGCAAATGGTT+CGG | 0.512307 | 8.2:-28236753 | MS.gene012007:intron |
| TATAGGGTCGAGGGGCCGAT+TGG | 0.523421 | 8.2:-28234436 | MS.gene012007:intron |
| TTGGGTGGTAAAAGTGGAGC+AGG | 0.523438 | 8.2:-28234374 | MS.gene012007:intron |
| TAGGCTGCTTTGAGCAATAC+CGG | 0.525681 | 8.2:-28233654 | MS.gene012007:CDS |
| TGTGAAGTTGCAGGAATGGT+AGG | 0.529401 | 8.2:-28237995 | None:intergenic |
| AATAAGCAAACCTCAAAAGC+TGG | 0.531836 | 8.2:+28236468 | None:intergenic |
| TGGTATGTATATAGGGTCGA+GGG | 0.533824 | 8.2:-28234445 | MS.gene012007:intron |
| TTGGGATTCCTCTTCAGGTG+TGG | 0.534109 | 8.2:+28233407 | None:intergenic |
| GCTTGATGCAACCTGACAAA+GGG | 0.535537 | 8.2:-28236530 | MS.gene012007:CDS |
| GCTCAAGATCTTCGTTGTGA+TGG | 0.538850 | 8.2:-28237932 | MS.gene012007:CDS |
| AGGGTTGAAGAGCATTTGAC+AGG | 0.542449 | 8.2:+28234402 | None:intergenic |
| GGCTTGTTGTTAGTTCAGAT+GGG | 0.544887 | 8.2:-28234159 | MS.gene012007:CDS |
| GGTTGGGAAGCACTATATTG+TGG | 0.549099 | 8.2:-28233433 | MS.gene012007:CDS |
| TCAAACTGGAGTCATTCCTC+AGG | 0.550431 | 8.2:-28237876 | MS.gene012007:intron |
| CAGGTCTGCTGACAACCAAT+CGG | 0.555371 | 8.2:+28234421 | None:intergenic |
| AATAGGCAAGGGCACATATG+TGG | 0.570917 | 8.2:-28233357 | MS.gene012007:CDS |
| TGTGGATGCCACACCTGAAG+AGG | 0.574227 | 8.2:-28233415 | MS.gene012007:CDS |
| GAGCAATACCGGTATTCCAA+AGG | 0.576363 | 8.2:-28233643 | MS.gene012007:CDS |
| ACTCCAGTTTGAACAAGGAT+AGG | 0.576834 | 8.2:+28237887 | None:intergenic |
| CCGTTCAACAACAACAAGTG+AGG | 0.584938 | 8.2:+28234210 | None:intergenic |
| TGTAACCAAACGAGGAGGTG+CGG | 0.586136 | 8.2:-28233334 | MS.gene012007:CDS |
| CTTCAACCCTGTCTCTTGGG+TGG | 0.589497 | 8.2:-28234389 | MS.gene012007:CDS |
| GGGAATCTGTTAGACGCTCT+AGG | 0.590181 | 8.2:-28234139 | MS.gene012007:CDS |
| ACCATATCAAGAATGACACT+TGG | 0.592489 | 8.2:+28233303 | None:intergenic |
| TGAAGTCATTGCTAGTGTGA+AGG | 0.599432 | 8.2:-28236708 | MS.gene012007:intron |
| GAACAATGTTTCATAGAAGG+TGG | 0.604223 | 8.2:-28237959 | MS.gene012007:CDS |
| CAATCTCTATTAATAGGCAA+GGG | 0.605158 | 8.2:-28233368 | MS.gene012007:CDS |
| AGCTTGATGCAACCTGACAA+AGG | 0.609252 | 8.2:-28236531 | MS.gene012007:CDS |
| CATTCTTGATATGGTATCCG+TGG | 0.610326 | 8.2:-28233295 | MS.gene012007:CDS |
| CTCGCTTACATGCTTAGCCA+CGG | 0.611065 | 8.2:+28233278 | None:intergenic |
| GAATGACTCCAGTTTGAACA+AGG | 0.614408 | 8.2:+28237882 | None:intergenic |
| TAACCAAACGAGGAGGTGCG+GGG | 0.626181 | 8.2:-28233332 | MS.gene012007:CDS |
| GGTATGTATATAGGGTCGAG+GGG | 0.671062 | 8.2:-28234444 | MS.gene012007:intron |
| AGAAGTTGACGTAAGTGACG+AGG | 0.710797 | 8.2:-28233583 | MS.gene012007:CDS |
| TAGTCAGTGTAACTATAACA+GGG | 0.713480 | 8.2:+28233532 | None:intergenic |
| ATATGTGGTGTAACCAAACG+AGG | 0.719182 | 8.2:-28233342 | MS.gene012007:CDS |
| TGTGGTGTAACCAAACGAGG+AGG | 0.748915 | 8.2:-28233339 | MS.gene012007:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTATATTTAATTAAATTTT+TGG | - | chr8.2:28236615-28236634 | MS.gene012007:intron | 0.0% |
| !! | AATTTATAATATCAACATTA+TGG | + | chr8.2:28237470-28237489 | None:intergenic | 10.0% |
| !! | ATATAAATAAAAATCAAGAA+TGG | + | chr8.2:28236687-28236706 | None:intergenic | 10.0% |
| !! | AATACTTTCACTTATTAAAA+TGG | - | chr8.2:28234916-28234935 | MS.gene012007:intron | 15.0% |
| !! | ACTACTAGATAAAATTAAAA+AGG | + | chr8.2:28234777-28234796 | None:intergenic | 15.0% |
| !! | CTTATAAATTATGTATTTCA+CGG | - | chr8.2:28233369-28233388 | MS.gene012007:CDS | 15.0% |
| !!! | TCAAAATCATTAGTTTTATT+TGG | - | chr8.2:28236716-28236735 | MS.gene012007:CDS | 15.0% |
| !!! | TTTTACTTATCATGATATAT+TGG | - | chr8.2:28234612-28234631 | MS.gene012007:intron | 15.0% |
| !!! | TTTTTTAAAATGTCAGTTTT+GGG | - | chr8.2:28237340-28237359 | MS.gene012007:intron | 15.0% |
| !! | AATAGAAAAACAACACTAAA+AGG | - | chr8.2:28236197-28236216 | MS.gene012007:intron | 20.0% |
| !! | AATCAAACTAATCCAATAAT+TGG | - | chr8.2:28235612-28235631 | MS.gene012007:intron | 20.0% |
| !! | ACTAGATAAAATTAAAAAGG+AGG | + | chr8.2:28234774-28234793 | None:intergenic | 20.0% |
| !! | ATAAATTATTTAGATGAGAG+AGG | - | chr8.2:28233903-28233922 | MS.gene012007:intron | 20.0% |
| !! | ATTAACAAAAAGTAAGAACA+TGG | + | chr8.2:28236903-28236922 | None:intergenic | 20.0% |
| !! | ATTATCATTTCAGACTTATA+AGG | - | chr8.2:28237166-28237185 | MS.gene012007:intron | 20.0% |
| !! | GTAAAGTTATTCATATATTC+TGG | - | chr8.2:28234795-28234814 | MS.gene012007:intron | 20.0% |
| !! | GTAACTTTAACATTAATTGT+CGG | + | chr8.2:28233455-28233474 | None:intergenic | 20.0% |
| !! | TAAATTATTTAGATGAGAGA+GGG | - | chr8.2:28233904-28233923 | MS.gene012007:intron | 20.0% |
| !! | TATAAAATTATATGCCTGAA+AGG | - | chr8.2:28237113-28237132 | MS.gene012007:intron | 20.0% |
| !! | TGTATGAAAATCACAAAATA+TGG | + | chr8.2:28237731-28237750 | None:intergenic | 20.0% |
| !! | TTAACAAAAAGTAAGAACAT+GGG | + | chr8.2:28236902-28236921 | None:intergenic | 20.0% |
| !! | TTATCATTTCAGACTTATAA+GGG | - | chr8.2:28237167-28237186 | MS.gene012007:intron | 20.0% |
| !! | TTTCTATTCAGTTACATATT+GGG | + | chr8.2:28236185-28236204 | None:intergenic | 20.0% |
| !!! | AAACTGACATTTTAAAAAAG+AGG | + | chr8.2:28237339-28237358 | None:intergenic | 20.0% |
| !!! | AACTGACATTTTAAAAAAGA+GGG | + | chr8.2:28237338-28237357 | None:intergenic | 20.0% |
| !!! | ACTAGTTTAGTTTTTGTTTT+TGG | + | chr8.2:28235832-28235851 | None:intergenic | 20.0% |
| !!! | ATATCTTTTGGTATGTATAT+AGG | - | chr8.2:28236745-28236764 | MS.gene012007:CDS | 20.0% |
| !!! | ATCTCAATTTTCAAGTTAAT+TGG | + | chr8.2:28235297-28235316 | None:intergenic | 20.0% |
| !!! | CTTTTTTAAAATGTCAGTTT+TGG | - | chr8.2:28237339-28237358 | MS.gene012007:intron | 20.0% |
| !!! | GATATGATCGATTTAAATTT+AGG | - | chr8.2:28236477-28236496 | MS.gene012007:intron | 20.0% |
| !!! | TATCTTTTGGTATGTATATA+GGG | - | chr8.2:28236746-28236765 | MS.gene012007:CDS | 20.0% |
| !!! | TATTTTTATACTAGTCCAAT+AGG | + | chr8.2:28233674-28233693 | None:intergenic | 20.0% |
| !!! | TCAAATCCTTTTTCAATATT+GGG | - | chr8.2:28235531-28235550 | MS.gene012007:intron | 20.0% |
| !!! | TTAGTATATTGACAACATTT+TGG | + | chr8.2:28233794-28233813 | None:intergenic | 20.0% |
| !!! | TTCAAATCCTTTTTCAATAT+TGG | - | chr8.2:28235530-28235549 | MS.gene012007:intron | 20.0% |
| !!! | TTTGAACATTTTAGTTATTC+TGG | + | chr8.2:28236523-28236542 | None:intergenic | 20.0% |
| !!! | TTTTCTATTCAGTTACATAT+TGG | + | chr8.2:28236186-28236205 | None:intergenic | 20.0% |
| ! | AAACATCAAAGAATGATTGT+GGG | + | chr8.2:28235268-28235287 | None:intergenic | 25.0% |
| ! | AAAGAGAATCAATCAAAAGT+TGG | + | chr8.2:28235211-28235230 | None:intergenic | 25.0% |
| ! | AAATTAAAATCATTGGGAGT+TGG | + | chr8.2:28234364-28234383 | None:intergenic | 25.0% |
| ! | AATTAAAATCATTGGGAGTT+GGG | + | chr8.2:28234363-28234382 | None:intergenic | 25.0% |
| ! | AGAGTTAATTATTCTTGAAG+TGG | - | chr8.2:28235559-28235578 | MS.gene012007:intron | 25.0% |
| ! | AGATAAAATTAAAAAGGAGG+AGG | + | chr8.2:28234771-28234790 | None:intergenic | 25.0% |
| ! | AGGTTTATGCTAAAAAGAAA+AGG | + | chr8.2:28235057-28235076 | None:intergenic | 25.0% |
| ! | ATGATATAAAAATGTGTGGT+TGG | - | chr8.2:28235655-28235674 | MS.gene012007:intron | 25.0% |
| ! | ATGTTACAGACATGATATTT+GGG | - | chr8.2:28237283-28237302 | MS.gene012007:intron | 25.0% |
| ! | ATTCATCATGTAAATCCAAT+AGG | - | chr8.2:28235772-28235791 | MS.gene012007:intron | 25.0% |
| ! | CACTAAAGATATCAAAGTTA+TGG | + | chr8.2:28233862-28233881 | None:intergenic | 25.0% |
| ! | CAGCTAAAATATAATGAATG+TGG | + | chr8.2:28237244-28237263 | None:intergenic | 25.0% |
| ! | CAGTTTCAATCTCTATTAAT+AGG | - | chr8.2:28237824-28237843 | MS.gene012007:intron | 25.0% |
| ! | GGGTCAAAATTAAAATCATT+GGG | + | chr8.2:28234370-28234389 | None:intergenic | 25.0% |
| ! | GGTTTATGCTAAAAAGAAAA+GGG | + | chr8.2:28235056-28235075 | None:intergenic | 25.0% |
| ! | GTAAACATAATCTTCACATT+AGG | + | chr8.2:28236861-28236880 | None:intergenic | 25.0% |
| ! | GTTAATGAACAGAATAAGTT+GGG | - | chr8.2:28235581-28235600 | MS.gene012007:intron | 25.0% |
| ! | GTTTATGCTAAAAAGAAAAG+GGG | + | chr8.2:28235055-28235074 | None:intergenic | 25.0% |
| ! | TAAAATGGATAAAATTCCAC+AGG | - | chr8.2:28234931-28234950 | MS.gene012007:intron | 25.0% |
| ! | TAAACATCAAAGAATGATTG+TGG | + | chr8.2:28235269-28235288 | None:intergenic | 25.0% |
| ! | TAACAAAAAGTAAGAACATG+GGG | + | chr8.2:28236901-28236920 | None:intergenic | 25.0% |
| ! | TACTTTATGAACTTCTTGAT+AGG | - | chr8.2:28234433-28234452 | MS.gene012007:CDS | 25.0% |
| ! | TTAGAGTCAATATTCTATTC+TGG | - | chr8.2:28236552-28236571 | MS.gene012007:CDS | 25.0% |
| ! | TTGGATGATATAAAAATGTG+TGG | - | chr8.2:28235651-28235670 | MS.gene012007:intron | 25.0% |
| ! | TTTATGCTAAAAAGAAAAGG+GGG | + | chr8.2:28235054-28235073 | None:intergenic | 25.0% |
| ! | TTTCTCAATTAAAGCATAAG+CGG | + | chr8.2:28236035-28236054 | None:intergenic | 25.0% |
| !! | ATTAGAATGATCGCATATTT+TGG | + | chr8.2:28237383-28237402 | None:intergenic | 25.0% |
| !! | ATTTGGCGTTTTATATCTTT+TGG | - | chr8.2:28236733-28236752 | MS.gene012007:CDS | 25.0% |
| !! | CTGAAATGATAATCATTTTG+TGG | + | chr8.2:28237159-28237178 | None:intergenic | 25.0% |
| !! | TCTGTCAATGTTTCATATTT+TGG | - | chr8.2:28234249-28234268 | MS.gene012007:intron | 25.0% |
| !! | TTATTCTGGAAGAATTGAAT+CGG | + | chr8.2:28236509-28236528 | None:intergenic | 25.0% |
| !!! | AACATTTCTCTAGTTTTTCA+TGG | - | chr8.2:28233812-28233831 | MS.gene012007:intron | 25.0% |
| !!! | AACTTTTGATTGATTCTCTT+TGG | - | chr8.2:28235210-28235229 | MS.gene012007:intron | 25.0% |
| !!! | ACATTTCTCTAGTTTTTCAT+GGG | - | chr8.2:28233813-28233832 | MS.gene012007:intron | 25.0% |
| !!! | ACTGACATTTTAAAAAAGAG+GGG | + | chr8.2:28237337-28237356 | None:intergenic | 25.0% |
| AAATAATCTGTTACAGTTCG+TGG | + | chr8.2:28236598-28236617 | None:intergenic | 30.0% | |
| AACATAATCTTCACATTAGG+AGG | + | chr8.2:28236858-28236877 | None:intergenic | 30.0% | |
| AACATCAAAGAATGATTGTG+GGG | + | chr8.2:28235267-28235286 | None:intergenic | 30.0% | |
| AATAGGCATTAGTTACATCA+AGG | + | chr8.2:28237517-28237536 | None:intergenic | 30.0% | |
| AGAACAAAACAAGATAGGAT+AGG | + | chr8.2:28237702-28237721 | None:intergenic | 30.0% | |
| AGAATCTCAAGATTGGTATA+AGG | + | chr8.2:28236101-28236120 | None:intergenic | 30.0% | |
| AGTCTATCAAAAAGTTCTCT+AGG | - | chr8.2:28235331-28235350 | MS.gene012007:intron | 30.0% | |
| AGTGAATCTTCAATTCGAAA+TGG | - | chr8.2:28236285-28236304 | MS.gene012007:intron | 30.0% | |
| ATTATTGCCATGATCATCAA+AGG | + | chr8.2:28237198-28237217 | None:intergenic | 30.0% | |
| CAATCTCTATTAATAGGCAA+GGG | - | chr8.2:28237830-28237849 | MS.gene012007:intron | 30.0% | |
| CAATGAGAACAAAACAAGAT+AGG | + | chr8.2:28237707-28237726 | None:intergenic | 30.0% | |
| CATGTTACAGACATGATATT+TGG | - | chr8.2:28237282-28237301 | MS.gene012007:intron | 30.0% | |
| CGAGCAGTTAATAAATAAAC+TGG | - | chr8.2:28237939-28237958 | MS.gene012007:CDS | 30.0% | |
| CTAATGCCTATTATTCTTGT+AGG | - | chr8.2:28237525-28237544 | MS.gene012007:intron | 30.0% | |
| CTATACAGTATAGATATACG+CGG | - | chr8.2:28233760-28233779 | MS.gene012007:intron | 30.0% | |
| CTCAAGAAATACAACCTTTA+CGG | - | chr8.2:28236124-28236143 | MS.gene012007:intron | 30.0% | |
| GAAGTTCTTCATCCAATTAT+TGG | + | chr8.2:28235627-28235646 | None:intergenic | 30.0% | |
| GAATCTCAAGATTGGTATAA+GGG | + | chr8.2:28236100-28236119 | None:intergenic | 30.0% | |
| GGGGTCAAAATTAAAATCAT+TGG | + | chr8.2:28234371-28234390 | None:intergenic | 30.0% | |
| GGTTAATGAACAGAATAAGT+TGG | - | chr8.2:28235580-28235599 | MS.gene012007:intron | 30.0% | |
| GTTGGGATCTTTATATTGAT+GGG | - | chr8.2:28237018-28237037 | MS.gene012007:intron | 30.0% | |
| TAGCAACCCAATATTGAAAA+AGG | + | chr8.2:28235540-28235559 | None:intergenic | 30.0% | |
| TAGTCAGTGTAACTATAACA+GGG | + | chr8.2:28237669-28237688 | None:intergenic | 30.0% | |
| TATGAAACATGGATCAAGAT+TGG | + | chr8.2:28233964-28233983 | None:intergenic | 30.0% | |
| TATTTCCTTCTAGTATCAAG+AGG | + | chr8.2:28234968-28234987 | None:intergenic | 30.0% | |
| TCAATCTCTATTAATAGGCA+AGG | - | chr8.2:28237829-28237848 | MS.gene012007:intron | 30.0% | |
| TGTTGGGATCTTTATATTGA+TGG | - | chr8.2:28237017-28237036 | MS.gene012007:intron | 30.0% | |
| TTAGTCAGTGTAACTATAAC+AGG | + | chr8.2:28237670-28237689 | None:intergenic | 30.0% | |
| TTCGAATTGAAGATTCACTA+AGG | + | chr8.2:28236284-28236303 | None:intergenic | 30.0% | |
| TTGTTGAACGGAAAATTTGT+TGG | - | chr8.2:28237000-28237019 | MS.gene012007:intron | 30.0% | |
| ! | AAGAAAAATTTCACTGACTG+GGG | + | chr8.2:28234390-28234409 | None:intergenic | 30.0% |
| ! | AGAGAACTTTTTGATAGACT+TGG | + | chr8.2:28235331-28235350 | None:intergenic | 30.0% |
| ! | CAAGAAAAATTTCACTGACT+GGG | + | chr8.2:28234391-28234410 | None:intergenic | 30.0% |
| ! | GATATGCAGTTGATATATAC+TGG | - | chr8.2:28235956-28235975 | MS.gene012007:intron | 30.0% |
| ! | GATTGGCTAAATTTGAGATA+TGG | + | chr8.2:28233947-28233966 | None:intergenic | 30.0% |
| ! | TCTAGGGTCAAATGATTATT+AGG | + | chr8.2:28234008-28234027 | None:intergenic | 30.0% |
| ! | TGTTATAGTTACACTGACTA+AGG | - | chr8.2:28237669-28237688 | MS.gene012007:intron | 30.0% |
| ! | TGTTGAACGGAAAATTTGTT+GGG | - | chr8.2:28237001-28237020 | MS.gene012007:intron | 30.0% |
| ! | TTTTGTGTTTGGAGAAATTC+TGG | - | chr8.2:28235736-28235755 | MS.gene012007:intron | 30.0% |
| !! | AATGAAAGCATTATTACCTG+AGG | + | chr8.2:28233341-28233360 | None:intergenic | 30.0% |
| !! | AATTTGAACCTTTGGAATAC+CGG | + | chr8.2:28237566-28237585 | None:intergenic | 30.0% |
| !! | AGGCAACAATAATGGATTTA+TGG | - | chr8.2:28237133-28237152 | MS.gene012007:intron | 30.0% |
| !! | CAATCTTTGACTTTTGTGTT+TGG | - | chr8.2:28235725-28235744 | MS.gene012007:intron | 30.0% |
| !! | CTGACATTTTAAAAAAGAGG+GGG | + | chr8.2:28237336-28237355 | None:intergenic | 30.0% |
| !! | GTATCCCTAAAATTGCTTTT+GGG | + | chr8.2:28236158-28236177 | None:intergenic | 30.0% |
| !!! | AAAATGTCAGTTTTGGGAAA+TGG | - | chr8.2:28237346-28237365 | MS.gene012007:intron | 30.0% |
| !!! | TCATATTTTGGTACTTGCAA+GGG | - | chr8.2:28234261-28234280 | MS.gene012007:intron | 30.0% |
| !!! | TTCATATTTTGGTACTTGCA+AGG | - | chr8.2:28234260-28234279 | MS.gene012007:intron | 30.0% |
| AAATCCAATAGGTTCTGTGA+TGG | - | chr8.2:28235783-28235802 | MS.gene012007:intron | 35.0% | |
| AAATGACACAACTCAATAGG+TGG | - | chr8.2:28235475-28235494 | MS.gene012007:intron | 35.0% | |
| AACCATTGAGCACTTGTTTA+AGG | + | chr8.2:28235705-28235724 | None:intergenic | 35.0% | |
| AACTGATTGCAAGATCAGTT+CGG | + | chr8.2:28237425-28237444 | None:intergenic | 35.0% | |
| AAGCAGCCTACAAGAATAAT+AGG | + | chr8.2:28237534-28237553 | None:intergenic | 35.0% | |
| AATAAGCAAACCTCAAAAGC+TGG | + | chr8.2:28234733-28234752 | None:intergenic | 35.0% | |
| ACCATATCAAGAATGACACT+TGG | + | chr8.2:28237898-28237917 | None:intergenic | 35.0% | |
| ATAAAATTCCACAGGAACAG+TGG | - | chr8.2:28234939-28234958 | MS.gene012007:intron | 35.0% | |
| ATAATCATTTGACCCTAGAC+TGG | - | chr8.2:28234009-28234028 | MS.gene012007:intron | 35.0% | |
| ATCAAAAAGTTCTCTAGGCA+TGG | - | chr8.2:28235336-28235355 | MS.gene012007:intron | 35.0% | |
| ATCCAAACATCAACACCTAT+TGG | - | chr8.2:28233656-28233675 | MS.gene012007:intron | 35.0% | |
| ATCCATTATTGTTGCCTTTC+AGG | + | chr8.2:28237130-28237149 | None:intergenic | 35.0% | |
| ATTCAGTTACATATTGGGTG+TGG | + | chr8.2:28236180-28236199 | None:intergenic | 35.0% | |
| ATTTCCATCACAGAACCTAT+TGG | + | chr8.2:28235790-28235809 | None:intergenic | 35.0% | |
| CTCACATGTATTAATCAAGC+TGG | + | chr8.2:28234305-28234324 | None:intergenic | 35.0% | |
| GAACAAATTTCACCCAAGTA+TGG | + | chr8.2:28235453-28235472 | None:intergenic | 35.0% | |
| GAACAATGTTTCATAGAAGG+TGG | - | chr8.2:28233239-28233258 | MS.gene012007:CDS | 35.0% | |
| GAATCTTTACTGTGTGCTAT+AGG | + | chr8.2:28235872-28235891 | None:intergenic | 35.0% | |
| GCAAGAAAAATTTCACTGAC+TGG | + | chr8.2:28234392-28234411 | None:intergenic | 35.0% | |
| GCATAAACCTTCCAAATTTG+AGG | - | chr8.2:28235067-28235086 | MS.gene012007:intron | 35.0% | |
| GGAGAACAATGTTTCATAGA+AGG | - | chr8.2:28233236-28233255 | MS.gene012007:CDS | 35.0% | |
| TAACATAAGCTGTAACTGCA+AGG | - | chr8.2:28236227-28236246 | MS.gene012007:intron | 35.0% | |
| TACCTTAAACAAGTGCTCAA+TGG | - | chr8.2:28235700-28235719 | MS.gene012007:intron | 35.0% | |
| TATCTGAGTCTCTTTCTACT+TGG | + | chr8.2:28235682-28235701 | None:intergenic | 35.0% | |
| TATGTAAGTGTGTCATAGGT+TGG | - | chr8.2:28233535-28233554 | MS.gene012007:CDS | 35.0% | |
| TCATACAATCTCTCCTTTCT+AGG | - | chr8.2:28237744-28237763 | MS.gene012007:intron | 35.0% | |
| TGAACTTCTTGATAGGCAAA+TGG | - | chr8.2:28234440-28234459 | MS.gene012007:intron | 35.0% | |
| TGAGTGAAGAATCTCAAGAT+TGG | + | chr8.2:28236108-28236127 | None:intergenic | 35.0% | |
| TGGAAATTAGCCACATTACA+TGG | - | chr8.2:28235803-28235822 | MS.gene012007:intron | 35.0% | |
| TGGAGGGCAATAAAGTAAAA+GGG | + | chr8.2:28236949-28236968 | None:intergenic | 35.0% | |
| TGGATGAAGAACTTCTGATT+TGG | - | chr8.2:28235632-28235651 | MS.gene012007:intron | 35.0% | |
| TGTCTATGTAAGTGTGTCAT+AGG | - | chr8.2:28233531-28233550 | MS.gene012007:CDS | 35.0% | |
| TTCTTGATAGGCAAATGGTT+CGG | - | chr8.2:28234445-28234464 | MS.gene012007:intron | 35.0% | |
| TTGATCCATGTTTCATAGCT+TGG | - | chr8.2:28233967-28233986 | MS.gene012007:intron | 35.0% | |
| TTTATGCAGTTTGACACATC+TGG | - | chr8.2:28237640-28237659 | MS.gene012007:intron | 35.0% | |
| ! | AAGGGTCTTTTGTGTTACAA+GGG | - | chr8.2:28234123-28234142 | MS.gene012007:intron | 35.0% |
| ! | AATGAACAGAATAAGTTGGG+TGG | - | chr8.2:28235584-28235603 | MS.gene012007:intron | 35.0% |
| ! | ACCTATTGAGTTGTGTCATT+TGG | + | chr8.2:28235476-28235495 | None:intergenic | 35.0% |
| ! | CATTTTCAGTTGTACCTTGA+TGG | + | chr8.2:28237090-28237109 | None:intergenic | 35.0% |
| ! | CTCTTTTGCATAGAAACTTG+GGG | + | chr8.2:28235380-28235399 | None:intergenic | 35.0% |
| ! | GCTCTTTTGCATAGAAACTT+GGG | + | chr8.2:28235381-28235400 | None:intergenic | 35.0% |
| ! | GGTATCCCTAAAATTGCTTT+TGG | + | chr8.2:28236159-28236178 | None:intergenic | 35.0% |
| ! | TCCAAGTGTCATTCTTGATA+TGG | - | chr8.2:28237894-28237913 | MS.gene012007:CDS | 35.0% |
| ! | TGCTCTTTTGCATAGAAACT+TGG | + | chr8.2:28235382-28235401 | None:intergenic | 35.0% |
| ! | TGTTTGGAGAAATTCTGGTT+GGG | - | chr8.2:28235741-28235760 | MS.gene012007:intron | 35.0% |
| !! | CCTATTGAGTTGTGTCATTT+GGG | + | chr8.2:28235475-28235494 | None:intergenic | 35.0% |
| !! | TCATAGGTTGGTATTTGCTA+GGG | - | chr8.2:28233547-28233566 | MS.gene012007:CDS | 35.0% |
| !! | TTTTTGGAAGCCATGTAATG+TGG | + | chr8.2:28235816-28235835 | None:intergenic | 35.0% |
| !!! | TCTCTAGTTTTTCATGGGAA+TGG | - | chr8.2:28233818-28233837 | MS.gene012007:intron | 35.0% |
| ACAATCTCTCCTTTCTAGGT+TGG | - | chr8.2:28237748-28237767 | MS.gene012007:intron | 40.0% | |
| ACAGTATAGATATACGCGGT+TGG | - | chr8.2:28233764-28233783 | MS.gene012007:intron | 40.0% | |
| ACGCCTTCAACTTAAAGTGT+CGG | + | chr8.2:28233399-28233418 | None:intergenic | 40.0% | |
| ACTCCAGTTTGAACAAGGAT+AGG | + | chr8.2:28233314-28233333 | None:intergenic | 40.0% | |
| ATAGGAAAGGGAGCAATGAT+AGG | + | chr8.2:28235152-28235171 | None:intergenic | 40.0% | |
| ATATGTGGTGTAACCAAACG+AGG | - | chr8.2:28237856-28237875 | MS.gene012007:intron | 40.0% | |
| CAATCTCTCCTTTCTAGGTT+GGG | - | chr8.2:28237749-28237768 | MS.gene012007:intron | 40.0% | |
| CACATGTGGAGGAAGTAAAT+GGG | + | chr8.2:28235026-28235045 | None:intergenic | 40.0% | |
| CATAGAAACTTGGGGAGATA+AGG | + | chr8.2:28235372-28235391 | None:intergenic | 40.0% | |
| CATGTCAATGCTTCATAGCT+TGG | - | chr8.2:28234093-28234112 | MS.gene012007:intron | 40.0% | |
| CATTCTTGATATGGTATCCG+TGG | - | chr8.2:28237903-28237922 | MS.gene012007:CDS | 40.0% | |
| CCCAAATGACACAACTCAAT+AGG | - | chr8.2:28235472-28235491 | MS.gene012007:intron | 40.0% | |
| CTCTAACACTCTCCATACTT+GGG | - | chr8.2:28235438-28235457 | MS.gene012007:intron | 40.0% | |
| CTGGAGGGCAATAAAGTAAA+AGG | + | chr8.2:28236950-28236969 | None:intergenic | 40.0% | |
| CTGTGTCTACGTGTTAATGT+CGG | - | chr8.2:28233507-28233526 | MS.gene012007:intron | 40.0% | |
| GAATGACTCCAGTTTGAACA+AGG | + | chr8.2:28233319-28233338 | None:intergenic | 40.0% | |
| GGATACCTCTTGATACTAGA+AGG | - | chr8.2:28234960-28234979 | MS.gene012007:intron | 40.0% | |
| GTGTTTGGAGAAATTCTGGT+TGG | - | chr8.2:28235740-28235759 | MS.gene012007:intron | 40.0% | |
| TAGGAAACCGACATAGGAAA+GGG | + | chr8.2:28235164-28235183 | None:intergenic | 40.0% | |
| TCAAGCTGGAGTCAAATCAT+CGG | + | chr8.2:28234291-28234310 | None:intergenic | 40.0% | |
| TCAATTCGAAATGGCAGTGA+AGG | - | chr8.2:28236294-28236313 | MS.gene012007:intron | 40.0% | |
| TCACATGTGGAGGAAGTAAA+TGG | + | chr8.2:28235027-28235046 | None:intergenic | 40.0% | |
| TCATAGCATGACACTTGCAA+GGG | - | chr8.2:28234174-28234193 | MS.gene012007:CDS | 40.0% | |
| TCATAGCTTGGCACTTACAA+GGG | - | chr8.2:28234105-28234124 | MS.gene012007:intron | 40.0% | |
| TCTCTAACACTCTCCATACT+TGG | - | chr8.2:28235437-28235456 | MS.gene012007:intron | 40.0% | |
| TGAAACTGCAGAGCTCATTT+GGG | + | chr8.2:28237812-28237831 | None:intergenic | 40.0% | |
| TGAAGTCATTGCTAGTGTGA+AGG | - | chr8.2:28234490-28234509 | MS.gene012007:intron | 40.0% | |
| TGCCTGAAAGGCAACAATAA+TGG | - | chr8.2:28237125-28237144 | MS.gene012007:intron | 40.0% | |
| TGGTAGACCAAATTAGCCAT+AGG | + | chr8.2:28235093-28235112 | None:intergenic | 40.0% | |
| TGGTATGTATATAGGGTCGA+GGG | - | chr8.2:28236753-28236772 | MS.gene012007:intron | 40.0% | |
| TGTACGTGTCTGTATGTGTT+TGG | - | chr8.2:28234053-28234072 | MS.gene012007:intron | 40.0% | |
| TGTGTCTACGTGTTAATGTC+GGG | - | chr8.2:28233508-28233527 | MS.gene012007:intron | 40.0% | |
| TTAGCCATAGGCCTCAAATT+TGG | + | chr8.2:28235081-28235100 | None:intergenic | 40.0% | |
| TTCATAGCATGACACTTGCA+AGG | - | chr8.2:28234173-28234192 | MS.gene012007:CDS | 40.0% | |
| TTCATAGCTTGGCACTTACA+AGG | - | chr8.2:28234104-28234123 | MS.gene012007:intron | 40.0% | |
| TTGAAACTGCAGAGCTCATT+TGG | + | chr8.2:28237813-28237832 | None:intergenic | 40.0% | |
| TTGCCATGATCATCAAAGGA+CGG | + | chr8.2:28237194-28237213 | None:intergenic | 40.0% | |
| TTGGTATGTATATAGGGTCG+AGG | - | chr8.2:28236752-28236771 | MS.gene012007:intron | 40.0% | |
| ! | CAAGGGTCTTTTGTGTTACA+AGG | - | chr8.2:28234122-28234141 | MS.gene012007:intron | 40.0% |
| ! | CACGCCCAAAAGCAATTTTA+GGG | - | chr8.2:28236151-28236170 | MS.gene012007:intron | 40.0% |
| ! | CTTTTACTTTATTGCCCTCC+AGG | - | chr8.2:28236948-28236967 | MS.gene012007:intron | 40.0% |
| ! | TCAATCAAAAGTTGGCTCCT+TGG | + | chr8.2:28235203-28235222 | None:intergenic | 40.0% |
| ! | TTTGAGGCCTATGGCTAATT+TGG | - | chr8.2:28235083-28235102 | MS.gene012007:intron | 40.0% |
| !! | CAACCGACACTTTAAGTTGA+AGG | - | chr8.2:28233393-28233412 | MS.gene012007:CDS | 40.0% |
| !! | CCTCACTTGTTGTTGTTGAA+CGG | - | chr8.2:28236988-28237007 | MS.gene012007:intron | 40.0% |
| !! | CTTCAACTTAAAGTGTCGGT+TGG | + | chr8.2:28233395-28233414 | None:intergenic | 40.0% |
| !! | GGCTTGTTGTTAGTTCAGAT+GGG | - | chr8.2:28237039-28237058 | MS.gene012007:intron | 40.0% |
| !! | GTCATAGGTTGGTATTTGCT+AGG | - | chr8.2:28233546-28233565 | MS.gene012007:CDS | 40.0% |
| !! | GTCCAATAGGTGTTGATGTT+TGG | + | chr8.2:28233661-28233680 | None:intergenic | 40.0% |
| AATTAATCCATACCCCTCCG+TGG | - | chr8.2:28235112-28235131 | MS.gene012007:intron | 45.0% | |
| ACACTCACAGACACCAGATT+GGG | + | chr8.2:28233590-28233609 | None:intergenic | 45.0% | |
| ACTTTGTTCACTCACACAGC+TGG | - | chr8.2:28234893-28234912 | MS.gene012007:intron | 45.0% | |
| AGAAGTTGACGTAAGTGACG+AGG | - | chr8.2:28237615-28237634 | MS.gene012007:intron | 45.0% | |
| AGCTTGATGCAACCTGACAA+AGG | - | chr8.2:28234667-28234686 | MS.gene012007:intron | 45.0% | |
| AGGAGTTGACATCCATACCA+CGG | + | chr8.2:28235132-28235151 | None:intergenic | 45.0% | |
| ATCGAGACTTTCCCTTTGTC+AGG | + | chr8.2:28234682-28234701 | None:intergenic | 45.0% | |
| CATTGCTCCCTTTCCTATGT+CGG | - | chr8.2:28235154-28235173 | MS.gene012007:intron | 45.0% | |
| CCAAAGGTTCAAATTGCTGC+TGG | - | chr8.2:28237571-28237590 | MS.gene012007:intron | 45.0% | |
| CCAGCAGCAATTTGAACCTT+TGG | + | chr8.2:28237574-28237593 | None:intergenic | 45.0% | |
| CCATAGGCCTCAAATTTGGA+AGG | + | chr8.2:28235077-28235096 | None:intergenic | 45.0% | |
| CCGTTCAACAACAACAAGTG+AGG | + | chr8.2:28236991-28237010 | None:intergenic | 45.0% | |
| CGACCTATCCTTGTTCAAAC+TGG | - | chr8.2:28233308-28233327 | MS.gene012007:CDS | 45.0% | |
| CTGATGATTTGACCCCAATC+TGG | - | chr8.2:28233574-28233593 | MS.gene012007:CDS | 45.0% | |
| GAAACTTGGGGAGATAAGGA+CGG | + | chr8.2:28235368-28235387 | None:intergenic | 45.0% | |
| GAATGATTGTGGGGAAGCTA+TGG | + | chr8.2:28235258-28235277 | None:intergenic | 45.0% | |
| GAGCAATACCGGTATTCCAA+AGG | - | chr8.2:28237555-28237574 | MS.gene012007:intron | 45.0% | |
| GAGTGCCAAGCTATGAAACA+TGG | + | chr8.2:28233975-28233994 | None:intergenic | 45.0% | |
| GCTCAAGATCTTCGTTGTGA+TGG | - | chr8.2:28233266-28233285 | MS.gene012007:CDS | 45.0% | |
| GCTTGATGCAACCTGACAAA+GGG | - | chr8.2:28234668-28234687 | MS.gene012007:intron | 45.0% | |
| GGTATGTATATAGGGTCGAG+GGG | - | chr8.2:28236754-28236773 | MS.gene012007:intron | 45.0% | |
| GTAGGAAACCGACATAGGAA+AGG | + | chr8.2:28235165-28235184 | None:intergenic | 45.0% | |
| TAGTGCTTCCCAACCTAGAA+AGG | + | chr8.2:28237760-28237779 | None:intergenic | 45.0% | |
| TCAAACTGGAGTCATTCCTC+AGG | - | chr8.2:28233322-28233341 | MS.gene012007:CDS | 45.0% | |
| TCATAGCTTGGCACTCACAA+GGG | - | chr8.2:28233979-28233998 | MS.gene012007:intron | 45.0% | |
| TCGTCACTTACGTCAACTTC+TGG | + | chr8.2:28237616-28237635 | None:intergenic | 45.0% | |
| TGTCTCTTGGGTGGTAAAAG+TGG | - | chr8.2:28236818-28236837 | MS.gene012007:intron | 45.0% | |
| TTCATAGCTTGGCACTCACA+AGG | - | chr8.2:28233978-28233997 | MS.gene012007:intron | 45.0% | |
| ! | AAGTTGGCTCCTTGGTACTA+TGG | + | chr8.2:28235195-28235214 | None:intergenic | 45.0% |
| ! | AATAGGCAAGGGCACATATG+TGG | - | chr8.2:28237841-28237860 | MS.gene012007:intron | 45.0% |
| ! | ACGGAGGGGTATGGATTAAT+TGG | + | chr8.2:28235113-28235132 | None:intergenic | 45.0% |
| ! | ACTTTTACCACCCAAGAGAC+AGG | + | chr8.2:28236819-28236838 | None:intergenic | 45.0% |
| ! | CCACGCCCAAAAGCAATTTT+AGG | - | chr8.2:28236150-28236169 | MS.gene012007:intron | 45.0% |
| ! | CCTTCCAAATTTGAGGCCTA+TGG | - | chr8.2:28235074-28235093 | MS.gene012007:intron | 45.0% |
| ! | CTCATTTGGGATTCCTCTTC+AGG | + | chr8.2:28237799-28237818 | None:intergenic | 45.0% |
| ! | CTTTTACCACCCAAGAGACA+GGG | + | chr8.2:28236818-28236837 | None:intergenic | 45.0% |
| ! | TAGGCTGCTTTGAGCAATAC+CGG | - | chr8.2:28237544-28237563 | MS.gene012007:intron | 45.0% |
| ! | TTGTCAGGTTGCATCAAGCT+TGG | + | chr8.2:28234667-28234686 | None:intergenic | 45.0% |
| !! | AGGGTTGAAGAGCATTTGAC+AGG | + | chr8.2:28236799-28236818 | None:intergenic | 45.0% |
| !! | CCTAAAATTGCTTTTGGGCG+TGG | + | chr8.2:28236153-28236172 | None:intergenic | 45.0% |
| !! | GGGCTTGTTGTTAGTTCAGA+TGG | - | chr8.2:28237038-28237057 | MS.gene012007:intron | 45.0% |
| !! | GGTTGGGAAGCACTATATTG+TGG | - | chr8.2:28237765-28237784 | MS.gene012007:intron | 45.0% |
| AACAACCCACACATGGACAC+TGG | + | chr8.2:28234223-28234242 | None:intergenic | 50.0% | |
| ACAACCCACACATGGACACT+GGG | + | chr8.2:28234222-28234241 | None:intergenic | 50.0% | |
| ACACTCCTCACCTAAGCAGT+GGG | + | chr8.2:28235408-28235427 | None:intergenic | 50.0% | |
| ACGTGAGGACCATAGTACCA+AGG | - | chr8.2:28235183-28235202 | MS.gene012007:intron | 50.0% | |
| AGACAGCAACAACCCACACA+TGG | + | chr8.2:28234230-28234249 | None:intergenic | 50.0% | |
| AGTTGACATCCATACCACGG+AGG | + | chr8.2:28235129-28235148 | None:intergenic | 50.0% | |
| ATCTGGTGTCTGTGAGTGTC+AGG | - | chr8.2:28233591-28233610 | MS.gene012007:CDS | 50.0% | |
| CACTCACAGACACCAGATTG+GGG | + | chr8.2:28233589-28233608 | None:intergenic | 50.0% | |
| CAGGTCTGCTGACAACCAAT+CGG | + | chr8.2:28236780-28236799 | None:intergenic | 50.0% | |
| CAGTGTCACGCTATGAAGCA+CGG | + | chr8.2:28234331-28234350 | None:intergenic | 50.0% | |
| CGGAAGTCCTGAGTTTAGCT+CGG | + | chr8.2:28236015-28236034 | None:intergenic | 50.0% | |
| CTCACGTAGGAAACCGACAT+AGG | + | chr8.2:28235170-28235189 | None:intergenic | 50.0% | |
| CTCGCTTACATGCTTAGCCA+CGG | + | chr8.2:28237923-28237942 | None:intergenic | 50.0% | |
| GACACGTAGACACCAGTCTA+GGG | + | chr8.2:28234024-28234043 | None:intergenic | 50.0% | |
| GACACTCACAGACACCAGAT+TGG | + | chr8.2:28233591-28233610 | None:intergenic | 50.0% | |
| GATCAATTCCAGCACCTGGA+GGG | + | chr8.2:28236965-28236984 | None:intergenic | 50.0% | |
| GCTCTTCAACCCTGTCTCTT+GGG | - | chr8.2:28236806-28236825 | MS.gene012007:intron | 50.0% | |
| GGGAATCTGTTAGACGCTCT+AGG | - | chr8.2:28237059-28237078 | MS.gene012007:intron | 50.0% | |
| GGTTCGGCAAGAGTCAGAAT+TGG | - | chr8.2:28234461-28234480 | MS.gene012007:intron | 50.0% | |
| GTTGACATCCATACCACGGA+GGG | + | chr8.2:28235128-28235147 | None:intergenic | 50.0% | |
| TATATTGGCCACGCAAGTGC+AGG | - | chr8.2:28234627-28234646 | MS.gene012007:intron | 50.0% | |
| TGACACGTAGACACCAGTCT+AGG | + | chr8.2:28234025-28234044 | None:intergenic | 50.0% | |
| TGCTCTTCAACCCTGTCTCT+TGG | - | chr8.2:28236805-28236824 | MS.gene012007:intron | 50.0% | |
| TGGTACTATGGTCCTCACGT+AGG | + | chr8.2:28235183-28235202 | None:intergenic | 50.0% | |
| TGTAACCAAACGAGGAGGTG+CGG | - | chr8.2:28237864-28237883 | MS.gene012007:intron | 50.0% | |
| TGTGGTGTAACCAAACGAGG+AGG | - | chr8.2:28237859-28237878 | MS.gene012007:intron | 50.0% | |
| TTGACATCCATACCACGGAG+GGG | + | chr8.2:28235127-28235146 | None:intergenic | 50.0% | |
| TTGGGATTCCTCTTCAGGTG+TGG | + | chr8.2:28237794-28237813 | None:intergenic | 50.0% | |
| TTGGGTGGTAAAAGTGGAGC+AGG | - | chr8.2:28236824-28236843 | MS.gene012007:intron | 50.0% | |
| TTTGGGCGTGGAATCCGTAA+AGG | + | chr8.2:28236141-28236160 | None:intergenic | 50.0% | |
| ! | AAAAGGGGGCATGTCACATG+TGG | + | chr8.2:28235040-28235059 | None:intergenic | 50.0% |
| ! | AACTTCTGGTTGCTCGTCAC+TGG | + | chr8.2:28237602-28237621 | None:intergenic | 50.0% |
| ! | GAAGTCCTGAGTTTAGCTCG+GGG | + | chr8.2:28236013-28236032 | None:intergenic | 50.0% |
| ! | GACTGCAGAACCAGCTTTTG+AGG | - | chr8.2:28234720-28234739 | MS.gene012007:intron | 50.0% |
| ! | GGAAGTCCTGAGTTTAGCTC+GGG | + | chr8.2:28236014-28236033 | None:intergenic | 50.0% |
| ! | GGACCGTCCTTTGATGATCA+TGG | - | chr8.2:28237188-28237207 | MS.gene012007:intron | 50.0% |
| !! | AGAGGTATCCACTGTTCCTG+TGG | + | chr8.2:28234950-28234969 | None:intergenic | 50.0% |
| !! | CTATGTCGGTTTCCTACGTG+AGG | - | chr8.2:28235168-28235187 | MS.gene012007:intron | 50.0% |
| AAGTTCAGCCTGCACTTGCG+TGG | + | chr8.2:28234638-28234657 | None:intergenic | 55.0% | |
| ACGCAAGTGCAGGCTGAACT+TGG | - | chr8.2:28234637-28234656 | MS.gene012007:intron | 55.0% | |
| ACTTGGGGAGATAAGGACGG+TGG | + | chr8.2:28235365-28235384 | None:intergenic | 55.0% | |
| ATCCATACCACGGAGGGGTA+TGG | + | chr8.2:28235122-28235141 | None:intergenic | 55.0% | |
| ATCCATACCCCTCCGTGGTA+TGG | - | chr8.2:28235117-28235136 | MS.gene012007:intron | 55.0% | |
| CGATCAATTCCAGCACCTGG+AGG | + | chr8.2:28236966-28236985 | None:intergenic | 55.0% | |
| CTTCAACCCTGTCTCTTGGG+TGG | - | chr8.2:28236809-28236828 | MS.gene012007:intron | 55.0% | |
| CTTTATTGCCCTCCAGGTGC+TGG | - | chr8.2:28236954-28236973 | MS.gene012007:intron | 55.0% | |
| GACACTCCTCACCTAAGCAG+TGG | + | chr8.2:28235409-28235428 | None:intergenic | 55.0% | |
| GAGCGATCAATTCCAGCACC+TGG | + | chr8.2:28236969-28236988 | None:intergenic | 55.0% | |
| GGGACAGGATGTAGCTCACA+AGG | + | chr8.2:28235993-28236012 | None:intergenic | 55.0% | |
| GGGGAAGCTATGGACCCTAA+AGG | + | chr8.2:28235248-28235267 | None:intergenic | 55.0% | |
| TGTGGATGCCACACCTGAAG+AGG | - | chr8.2:28237783-28237802 | MS.gene012007:intron | 55.0% | |
| ! | CTGGGCTGGGGTCAAATCAT+CGG | + | chr8.2:28234204-28234223 | None:intergenic | 55.0% |
| ! | GTAACCAAACGAGGAGGTGC+GGG | - | chr8.2:28237865-28237884 | MS.gene012007:intron | 55.0% |
| ! | TAACCAAACGAGGAGGTGCG+GGG | - | chr8.2:28237866-28237885 | MS.gene012007:intron | 55.0% |
| ! | TGGGCTGGGGTCAAATCATC+GGG | + | chr8.2:28234203-28234222 | None:intergenic | 55.0% |
| !! | AAGAGCACTGCCCACTGCTT+AGG | - | chr8.2:28235395-28235414 | MS.gene012007:intron | 55.0% |
| !! | GGCACTGATCGCTGCCTTTA+GGG | - | chr8.2:28235231-28235250 | MS.gene012007:intron | 55.0% |
| !! | TGGCACTGATCGCTGCCTTT+AGG | - | chr8.2:28235230-28235249 | MS.gene012007:intron | 55.0% |
| CACACATGGACACTGGGCTG+GGG | + | chr8.2:28234216-28234235 | None:intergenic | 60.0% | |
| CACTGCCCACTGCTTAGGTG+AGG | - | chr8.2:28235400-28235419 | MS.gene012007:intron | 60.0% | |
| CCACACATGGACACTGGGCT+GGG | + | chr8.2:28234217-28234236 | None:intergenic | 60.0% | |
| CCAGCCCAGTGTCCATGTGT+GGG | - | chr8.2:28234215-28234234 | MS.gene012007:CDS | 60.0% | |
| CCTGTCCCCGAGCTAAACTC+AGG | - | chr8.2:28236005-28236024 | MS.gene012007:intron | 60.0% | |
| TATAGGGTCGAGGGGCCGAT+TGG | - | chr8.2:28236762-28236781 | MS.gene012007:intron | 60.0% | |
| TGGGGAGATAAGGACGGTGG+AGG | + | chr8.2:28235362-28235381 | None:intergenic | 60.0% | |
| ! | AGGGGGCATGTCACATGTGG+AGG | + | chr8.2:28235037-28235056 | None:intergenic | 60.0% |
| ! | CCTGAGTTTAGCTCGGGGAC+AGG | + | chr8.2:28236008-28236027 | None:intergenic | 60.0% |
| ! | CGCTCTAGGTGCTGCCATCA+AGG | - | chr8.2:28237073-28237092 | MS.gene012007:intron | 60.0% |
| CCCACACATGGACACTGGGC+TGG | + | chr8.2:28234218-28234237 | None:intergenic | 65.0% | |
| CCCAGCCCAGTGTCCATGTG+TGG | - | chr8.2:28234214-28234233 | MS.gene012007:CDS | 65.0% | |
| CAGCCCCGCACCTCCTCGTT+TGG | + | chr8.2:28237872-28237891 | None:intergenic | 70.0% | |
| ! | CAAACGAGGAGGTGCGGGGC+TGG | - | chr8.2:28237870-28237889 | MS.gene012007:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.2 | gene | 28233218 | 28238002 | 28233218 | ID=MS.gene012007 |
| chr8.2 | mRNA | 28233218 | 28238002 | 28233218 | ID=MS.gene012007.t1;Parent=MS.gene012007 |
| chr8.2 | exon | 28237877 | 28238002 | 28237877 | ID=MS.gene012007.t1.exon1;Parent=MS.gene012007.t1 |
| chr8.2 | CDS | 28237877 | 28238002 | 28237877 | ID=cds.MS.gene012007.t1;Parent=MS.gene012007.t1 |
| chr8.2 | exon | 28236709 | 28236765 | 28236709 | ID=MS.gene012007.t1.exon2;Parent=MS.gene012007.t1 |
| chr8.2 | CDS | 28236709 | 28236765 | 28236709 | ID=cds.MS.gene012007.t1;Parent=MS.gene012007.t1 |
| chr8.2 | exon | 28236479 | 28236571 | 28236479 | ID=MS.gene012007.t1.exon3;Parent=MS.gene012007.t1 |
| chr8.2 | CDS | 28236479 | 28236571 | 28236479 | ID=cds.MS.gene012007.t1;Parent=MS.gene012007.t1 |
| chr8.2 | exon | 28234375 | 28234453 | 28234375 | ID=MS.gene012007.t1.exon4;Parent=MS.gene012007.t1 |
| chr8.2 | CDS | 28234375 | 28234453 | 28234375 | ID=cds.MS.gene012007.t1;Parent=MS.gene012007.t1 |
| chr8.2 | exon | 28234126 | 28234250 | 28234126 | ID=MS.gene012007.t1.exon5;Parent=MS.gene012007.t1 |
| chr8.2 | CDS | 28234126 | 28234250 | 28234126 | ID=cds.MS.gene012007.t1;Parent=MS.gene012007.t1 |
| chr8.2 | exon | 28233530 | 28233673 | 28233530 | ID=MS.gene012007.t1.exon6;Parent=MS.gene012007.t1 |
| chr8.2 | CDS | 28233530 | 28233673 | 28233530 | ID=cds.MS.gene012007.t1;Parent=MS.gene012007.t1 |
| chr8.2 | exon | 28233218 | 28233454 | 28233218 | ID=MS.gene012007.t1.exon7;Parent=MS.gene012007.t1 |
| chr8.2 | CDS | 28233218 | 28233454 | 28233218 | ID=cds.MS.gene012007.t1;Parent=MS.gene012007.t1 |
| Gene Sequence |
| Protein sequence |
