Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene87461.t1 | XP_003629432.1 | 96.5 | 286 | 10 | 0 | 1 | 286 | 1 | 286 | 1.00E-147 | 532.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene87461.t1 | Q15024 | 36.0 | 283 | 172 | 3 | 2 | 282 | 4 | 279 | 5.2e-47 | 189.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene87461.t1 | G7LDZ3 | 96.5 | 286 | 10 | 0 | 1 | 286 | 1 | 286 | 7.5e-148 | 532.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene87461 | MS.gene21512 | PPI |
| MS.gene87461 | MS.gene54196 | PPI |
| MS.gene87461 | MS.gene024471 | PPI |
| MS.gene87461 | MS.gene015362 | PPI |
| MS.gene87461 | MS.gene96248 | PPI |
| MS.gene87461 | MS.gene004405 | PPI |
| MS.gene87461 | MS.gene22822 | PPI |
| MS.gene87461 | MS.gene015363 | PPI |
| MS.gene87461 | MS.gene09699 | PPI |
| MS.gene87461 | MS.gene05840 | PPI |
| MS.gene87461 | MS.gene025936 | PPI |
| MS.gene87461 | MS.gene09700 | PPI |
| MS.gene87461 | MS.gene002724 | PPI |
| MS.gene87461 | MS.gene54197 | PPI |
| MS.gene87461 | MS.gene050621 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene87461.t1 | MTR_8g077430 | 96.503 | 286 | 10 | 0 | 1 | 286 | 1 | 286 | 0.0 | 553 |
| MS.gene87461.t1 | MTR_1g031820 | 89.161 | 286 | 31 | 0 | 1 | 286 | 398 | 683 | 0.0 | 518 |
| MS.gene87461.t1 | MTR_8g077430 | 96.313 | 217 | 8 | 0 | 70 | 286 | 1 | 217 | 1.21e-149 | 417 |
| MS.gene87461.t1 | MTR_1g063090 | 31.227 | 269 | 163 | 7 | 4 | 265 | 11 | 264 | 1.03e-30 | 117 |
| MS.gene87461.t1 | MTR_2g019210 | 28.322 | 286 | 186 | 6 | 4 | 283 | 11 | 283 | 3.38e-29 | 114 |
| MS.gene87461.t1 | MTR_2g019210 | 28.322 | 286 | 186 | 6 | 4 | 283 | 11 | 283 | 1.16e-28 | 114 |
| MS.gene87461.t1 | MTR_1g007060 | 29.655 | 290 | 173 | 5 | 11 | 283 | 29 | 304 | 1.06e-22 | 95.5 |
| MS.gene87461.t1 | MTR_1g007060 | 29.688 | 256 | 150 | 4 | 11 | 250 | 29 | 270 | 5.36e-20 | 87.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene87461.t1 | AT3G07750 | 76.923 | 286 | 65 | 1 | 2 | 286 | 1 | 286 | 1.42e-163 | 456 |
| MS.gene87461.t1 | AT3G07750 | 76.923 | 286 | 65 | 1 | 2 | 286 | 1 | 286 | 1.42e-163 | 456 |
| MS.gene87461.t1 | AT3G12990 | 30.712 | 267 | 168 | 5 | 1 | 262 | 8 | 262 | 8.64e-29 | 111 |
| MS.gene87461.t1 | AT3G12990 | 30.712 | 267 | 168 | 5 | 1 | 262 | 8 | 262 | 1.07e-28 | 112 |
| MS.gene87461.t1 | AT3G12990 | 30.712 | 267 | 168 | 5 | 1 | 262 | 8 | 262 | 1.07e-28 | 112 |
| MS.gene87461.t1 | AT3G60500 | 30.943 | 265 | 170 | 6 | 1 | 262 | 8 | 262 | 1.36e-27 | 110 |
| MS.gene87461.t1 | AT3G60500 | 30.303 | 264 | 173 | 4 | 1 | 262 | 8 | 262 | 6.20e-27 | 109 |
| MS.gene87461.t1 | AT3G60500 | 30.303 | 264 | 173 | 4 | 1 | 262 | 8 | 262 | 6.20e-27 | 109 |
| MS.gene87461.t1 | AT3G60500 | 30.303 | 264 | 173 | 4 | 1 | 262 | 8 | 262 | 6.20e-27 | 109 |
| MS.gene87461.t1 | AT1G60080 | 29.091 | 275 | 170 | 5 | 11 | 269 | 27 | 292 | 7.60e-22 | 93.2 |
| MS.gene87461.t1 | AT3G12990 | 32.680 | 153 | 95 | 2 | 1 | 153 | 8 | 152 | 2.62e-20 | 87.4 |
Find 67 sgRNAs with CRISPR-Local
Find 385 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTCATTTGTGATTCTTCTTC+AGG | 0.159917 | 8.3:+26878518 | None:intergenic |
| CGAGCAGTTAATAAATAAAT+TGG | 0.185130 | 8.3:-26878375 | MS.gene87461:CDS |
| TTGGTAAGTGTAACTATAAC+AGG | 0.272403 | 8.3:+26878646 | None:intergenic |
| CAGTTTCAATCTCTATTAAT+AGG | 0.278557 | 8.3:-26878490 | MS.gene87461:CDS |
| CCAGCAGCAATTTGAACCTT+TGG | 0.297088 | 8.3:+26878742 | None:intergenic |
| TGTTGGGATCTTTATATTGA+TGG | 0.312417 | 8.3:-26879297 | MS.gene87461:CDS |
| TCCAAGTGTCATTCTTGATA+TGG | 0.333896 | 8.3:-26878420 | MS.gene87461:CDS |
| GGAGAACAATGTTTCATAGA+AGG | 0.340868 | 8.3:-26883500 | MS.gene87461:CDS |
| CGACCTATCCTTGTTCAAAC+TGG | 0.354357 | 8.3:-26883428 | MS.gene87461:CDS |
| GGAATGGTAGGGTTATCTTT+AGG | 0.374104 | 8.3:-26883521 | MS.gene87461:CDS |
| TCCTCACTTGTTGTTGTTGA+AGG | 0.375420 | 8.3:-26879327 | MS.gene87461:CDS |
| ATCGAGACTTTCCCTTTGTC+AGG | 0.384869 | 8.3:+26882080 | None:intergenic |
| TTTATGCAGTTTGACACATC+TGG | 0.392871 | 8.3:-26878673 | MS.gene87461:CDS |
| CAGCCCCGCACCTCCTCGTT+TGG | 0.396965 | 8.3:+26878445 | None:intergenic |
| CAAACGAGGAGGTGCGGGGC+TGG | 0.401198 | 8.3:-26878444 | MS.gene87461:CDS |
| GTTGGGATCTTTATATTGAT+GGG | 0.410239 | 8.3:-26879296 | MS.gene87461:CDS |
| AATTTGAACCTTTGGAATAC+CGG | 0.443348 | 8.3:+26878750 | None:intergenic |
| ACACAAGTGCAGGCTGAACT+TGG | 0.443681 | 8.3:-26882122 | MS.gene87461:intron |
| TCGTCACTGACATCAACTTC+TGG | 0.444323 | 8.3:+26878700 | None:intergenic |
| TTGTTGAAGGGAAGATTTGT+TGG | 0.445845 | 8.3:-26879314 | MS.gene87461:CDS |
| GTGACCAAACGAGGAGGTGC+GGG | 0.455858 | 8.3:-26878449 | MS.gene87461:CDS |
| GGGCTTGTTGTTACTTCAGA+TGG | 0.472669 | 8.3:-26879276 | MS.gene87461:CDS |
| TGAACTTCTTGATAGGCAAA+TGG | 0.474000 | 8.3:-26882325 | MS.gene87461:intron |
| TTGTCAGGTTGCATCAAGCT+TGG | 0.482187 | 8.3:+26882095 | None:intergenic |
| CCAAAGGTTCAAATTGCTGC+TGG | 0.488677 | 8.3:-26878742 | MS.gene87461:CDS |
| GGTTCGGCAAGAGTCAGAAT+TGG | 0.505552 | 8.3:-26882304 | MS.gene87461:CDS |
| TGTGCAGCTGCAGGAATGGT+AGG | 0.507009 | 8.3:-26883533 | None:intergenic |
| TTGTGATTCTTCTTCAGGTG+TGG | 0.507244 | 8.3:+26878523 | None:intergenic |
| TCAATCTCTATTAATAGGCA+AGG | 0.508961 | 8.3:-26878485 | MS.gene87461:CDS |
| TTCTTGATAGGCAAATGGTT+CGG | 0.512307 | 8.3:-26882320 | MS.gene87461:intron |
| TGCTCTAGGTGCTGCCATCA+AGG | 0.514839 | 8.3:-26879241 | MS.gene87461:intron |
| CCTCACTTGTTGTTGTTGAA+GGG | 0.517453 | 8.3:-26879326 | MS.gene87461:CDS |
| TGTTGAAGGGAAGATTTGTT+GGG | 0.520413 | 8.3:-26879313 | MS.gene87461:CDS |
| TATAGGGTCGAGGGGCCGAT+TGG | 0.523421 | 8.3:-26879548 | MS.gene87461:intron |
| TAGGCTGCTTTGAGCAATAC+CGG | 0.525681 | 8.3:-26878769 | MS.gene87461:CDS |
| TTAGGTGCTAAAAGTAGAGC+AGG | 0.525866 | 8.3:-26879486 | MS.gene87461:intron |
| TTGATATGTATATAGGGTCG+AGG | 0.529528 | 8.3:-26879558 | MS.gene87461:intron |
| AATAAGCAAACCTCAAAAGC+TGG | 0.531836 | 8.3:+26882029 | None:intergenic |
| AGCGTTGAAGAGCATTTGAC+AGG | 0.532626 | 8.3:+26879514 | None:intergenic |
| GCTTGATGCAACCTGACAAA+GGG | 0.535537 | 8.3:-26882091 | MS.gene87461:CDS |
| GCTCAAGATCTTCGTTGTGA+TGG | 0.538850 | 8.3:-26883470 | MS.gene87461:CDS |
| TCAAACTGGAGTCATTCCTC+AGG | 0.550431 | 8.3:-26883414 | MS.gene87461:intron |
| TGATATGTATATAGGGTCGA+GGG | 0.553725 | 8.3:-26879557 | MS.gene87461:intron |
| CAGGTCTGCTGACAACCAAT+CGG | 0.555371 | 8.3:+26879533 | None:intergenic |
| GGCTTGTTGTTACTTCAGAT+GGG | 0.562324 | 8.3:-26879275 | MS.gene87461:CDS |
| GGTTGGGAAGCACTATATTG+TGG | 0.562580 | 8.3:-26878549 | MS.gene87461:CDS |
| AATAGGCAAGGGCACATATG+TGG | 0.564183 | 8.3:-26878473 | MS.gene87461:CDS |
| CGTGACCAAACGAGGAGGTG+CGG | 0.573041 | 8.3:-26878450 | MS.gene87461:CDS |
| GAGCAATACCGGTATTCCAA+AGG | 0.576363 | 8.3:-26878758 | MS.gene87461:CDS |
| ACTCCAGTTTGAACAAGGAT+AGG | 0.576834 | 8.3:+26883425 | None:intergenic |
| ACCATATCAAGAATGACACT+TGG | 0.592489 | 8.3:+26878419 | None:intergenic |
| GGGAATCTGTTAGATGCTCT+AGG | 0.596191 | 8.3:-26879255 | MS.gene87461:CDS |
| GTGCAGCTGCAGGAATGGTA+GGG | 0.598856 | 8.3:-26883532 | None:intergenic |
| TGAAGTCATTGCTAGTGTGA+AGG | 0.599432 | 8.3:-26882275 | MS.gene87461:intron |
| GAACAATGTTTCATAGAAGG+TGG | 0.604223 | 8.3:-26883497 | MS.gene87461:CDS |
| CAATCTCTATTAATAGGCAA+GGG | 0.605158 | 8.3:-26878484 | MS.gene87461:CDS |
| AGCTTGATGCAACCTGACAA+AGG | 0.609252 | 8.3:-26882092 | MS.gene87461:CDS |
| CATTCTTGATATGGTATCCG+TGG | 0.610326 | 8.3:-26878411 | MS.gene87461:CDS |
| CTCGCTTACATGCTTAGCCA+CGG | 0.611065 | 8.3:+26878394 | None:intergenic |
| GAATGACTCCAGTTTGAACA+AGG | 0.614408 | 8.3:+26883420 | None:intergenic |
| TGACCAAACGAGGAGGTGCG+GGG | 0.621126 | 8.3:-26878448 | MS.gene87461:CDS |
| ATATGTGGCGTGACCAAACG+AGG | 0.633478 | 8.3:-26878458 | MS.gene87461:CDS |
| TGTTATAGTTACACTTACCA+AGG | 0.634389 | 8.3:-26878644 | MS.gene87461:intron |
| CCCTTCAACAACAACAAGTG+AGG | 0.647336 | 8.3:+26879326 | None:intergenic |
| GATATGTATATAGGGTCGAG+GGG | 0.674035 | 8.3:-26879556 | MS.gene87461:intron |
| TGGTAAGTGTAACTATAACA+GGG | 0.713480 | 8.3:+26878647 | None:intergenic |
| TGTGGCGTGACCAAACGAGG+AGG | 0.732899 | 8.3:-26878455 | MS.gene87461:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATCTATTTTTAGAATTAAT+TGG | - | chr8.3:26883025-26883044 | MS.gene87461:intron | 10.0% |
| !!! | TAATTTAATTTTCTTATTAG+CGG | - | chr8.3:26878644-26878663 | MS.gene87461:intron | 10.0% |
| !!! | TCAAAATTATTAGTTTTATT+TGG | - | chr8.3:26882258-26882277 | MS.gene87461:intron | 10.0% |
| !! | AATACTTTCACTTATTAAAA+TGG | - | chr8.3:26880009-26880028 | MS.gene87461:intron | 15.0% |
| !! | ATGTAATTAAAAATCAAGAA+TGG | + | chr8.3:26882229-26882248 | None:intergenic | 15.0% |
| !! | TTTATGAAAATCAGAAAATA+TGG | + | chr8.3:26883269-26883288 | None:intergenic | 15.0% |
| !!! | ATATCTTTTGATATGTATAT+AGG | - | chr8.3:26882287-26882306 | MS.gene87461:CDS | 15.0% |
| !!! | TATCTTTTGATATGTATATA+GGG | - | chr8.3:26882288-26882307 | MS.gene87461:CDS | 15.0% |
| !!! | TTTTACTAATCATGATATAA+TGG | - | chr8.3:26879705-26879724 | MS.gene87461:intron | 15.0% |
| !!! | TTTTATAATATGTCAGTTTT+GGG | - | chr8.3:26882879-26882898 | MS.gene87461:intron | 15.0% |
| !! | AAACATCAAAGAATGATTAT+GGG | + | chr8.3:26880361-26880380 | None:intergenic | 20.0% |
| !! | AAACTGACATATTATAAAAG+AGG | + | chr8.3:26882878-26882897 | None:intergenic | 20.0% |
| !! | AAAGAGAATCAATTAAAAGT+TGG | + | chr8.3:26880304-26880323 | None:intergenic | 20.0% |
| !! | AACTGACATATTATAAAAGA+GGG | + | chr8.3:26882877-26882896 | None:intergenic | 20.0% |
| !! | AATAGAAAAACAACACTAAA+AGG | - | chr8.3:26881737-26881756 | MS.gene87461:intron | 20.0% |
| !! | AATCAAACTAATCCAATAAT+TGG | - | chr8.3:26881148-26881167 | MS.gene87461:intron | 20.0% |
| !! | ACTACTAGATACAATTAAAA+AGG | + | chr8.3:26879870-26879889 | None:intergenic | 20.0% |
| !! | ATGATATAAAAATGTGTTGT+TGG | - | chr8.3:26881191-26881210 | MS.gene87461:intron | 20.0% |
| !! | GATTTATAATATCAGCATTA+TGG | + | chr8.3:26883009-26883028 | None:intergenic | 20.0% |
| !! | GTAAAGTTATTCATATATTC+TGG | - | chr8.3:26879888-26879907 | MS.gene87461:intron | 20.0% |
| !! | TAAACATCAAAGAATGATTA+TGG | + | chr8.3:26880362-26880381 | None:intergenic | 20.0% |
| !! | TAATAATGCTTTCATTACTT+CGG | - | chr8.3:26878461-26878480 | MS.gene87461:CDS | 20.0% |
| !! | TATAAAATTATATGCCTGAA+AGG | - | chr8.3:26882651-26882670 | MS.gene87461:intron | 20.0% |
| !! | TCATAATCAAAATACACTAA+AGG | + | chr8.3:26879038-26879057 | None:intergenic | 20.0% |
| !! | TTAATGAACAGAATAAAGTT+GGG | - | chr8.3:26881118-26881137 | MS.gene87461:intron | 20.0% |
| !! | TTTCTATTCAGTTACATATT+GGG | + | chr8.3:26881725-26881744 | None:intergenic | 20.0% |
| !! | TTTCTCAATTAAAGCATAAT+TGG | + | chr8.3:26881575-26881594 | None:intergenic | 20.0% |
| !!! | AACTTTTAATTGATTCTCTT+TGG | - | chr8.3:26880303-26880322 | MS.gene87461:intron | 20.0% |
| !!! | AATCAATCTCTTTTACATTT+CGG | + | chr8.3:26881471-26881490 | None:intergenic | 20.0% |
| !!! | ACTAGTTTAGTTTTTGTTTT+TGG | + | chr8.3:26881368-26881387 | None:intergenic | 20.0% |
| !!! | ATCTCAATTTTCAAGTTAAT+TGG | + | chr8.3:26880390-26880409 | None:intergenic | 20.0% |
| !!! | CTGAAATGATAATCATTTTA+TGG | + | chr8.3:26882697-26882716 | None:intergenic | 20.0% |
| !!! | CTTTTATAATATGTCAGTTT+TGG | - | chr8.3:26882878-26882897 | MS.gene87461:intron | 20.0% |
| !!! | GTAACTTTTACATTAATTGT+AGG | + | chr8.3:26878617-26878636 | None:intergenic | 20.0% |
| !!! | TCAAATCCTTTTTCAATATT+GGG | - | chr8.3:26881060-26881079 | MS.gene87461:intron | 20.0% |
| !!! | TCTTTTCTTTAATAGTATGA+CGG | - | chr8.3:26879647-26879666 | MS.gene87461:intron | 20.0% |
| !!! | TTATTCTGAAAGAATTGAAT+CGG | + | chr8.3:26882051-26882070 | None:intergenic | 20.0% |
| !!! | TTCAAATCCTTTTTCAATAT+TGG | - | chr8.3:26881059-26881078 | MS.gene87461:intron | 20.0% |
| !!! | TTTTCTATTCAGTTACATAT+TGG | + | chr8.3:26881726-26881745 | None:intergenic | 20.0% |
| !!! | TTTTTTTTGAGAACATTACT+TGG | - | chr8.3:26878503-26878522 | MS.gene87461:CDS | 20.0% |
| ! | AAAATTAAAGTCTATGGAGT+TGG | + | chr8.3:26879452-26879471 | None:intergenic | 25.0% |
| ! | AAATTAAAGTCTATGGAGTT+GGG | + | chr8.3:26879451-26879470 | None:intergenic | 25.0% |
| ! | AACATCAAAGAATGATTATG+GGG | + | chr8.3:26880360-26880379 | None:intergenic | 25.0% |
| ! | AACTGTCATAATATTCCTAA+AGG | - | chr8.3:26880578-26880597 | MS.gene87461:intron | 25.0% |
| ! | ACTAGATACAATTAAAAAGG+AGG | + | chr8.3:26879867-26879886 | None:intergenic | 25.0% |
| ! | ACTGACATATTATAAAAGAG+GGG | + | chr8.3:26882876-26882895 | None:intergenic | 25.0% |
| ! | AGAGTTAATTATTCTTGAAG+TGG | - | chr8.3:26881095-26881114 | MS.gene87461:intron | 25.0% |
| ! | AGGTTTATGCTAAAAAGAAA+AGG | + | chr8.3:26880150-26880169 | None:intergenic | 25.0% |
| ! | ATCAAGACAAATAGACAAAT+TGG | + | chr8.3:26882002-26882021 | None:intergenic | 25.0% |
| ! | ATCCAAAAATCAACAACTAT+TGG | - | chr8.3:26878817-26878836 | MS.gene87461:intron | 25.0% |
| ! | ATGTTACAGACATGATATTT+GGG | - | chr8.3:26882821-26882840 | MS.gene87461:intron | 25.0% |
| ! | ATTCATCATGTAAATCCAAT+AGG | - | chr8.3:26881308-26881327 | MS.gene87461:intron | 25.0% |
| ! | CAGTTTCAATCTCTATTAAT+AGG | - | chr8.3:26883362-26883381 | MS.gene87461:intron | 25.0% |
| ! | CGAGCAGTTAATAAATAAAT+TGG | - | chr8.3:26883477-26883496 | MS.gene87461:CDS | 25.0% |
| ! | GAAGTTATTCATCCAATTAT+TGG | + | chr8.3:26881163-26881182 | None:intergenic | 25.0% |
| ! | GTAAACATAATCTTCACATT+AGG | + | chr8.3:26882403-26882422 | None:intergenic | 25.0% |
| ! | GTTAATGAACAGAATAAAGT+TGG | - | chr8.3:26881117-26881136 | MS.gene87461:intron | 25.0% |
| ! | TAAAGCAAGAAAAATTTCAC+TGG | + | chr8.3:26879483-26879502 | None:intergenic | 25.0% |
| ! | TACTTTATGAACTTCTTGAT+AGG | - | chr8.3:26879520-26879539 | MS.gene87461:CDS | 25.0% |
| ! | TGGAAATTAGTTACATTACA+TGG | - | chr8.3:26881339-26881358 | MS.gene87461:intron | 25.0% |
| ! | TTATAACTTATGTATTGCAC+CGG | - | chr8.3:26878532-26878551 | MS.gene87461:CDS | 25.0% |
| !! | ATGTTATGTTGACAACATTT+TGG | + | chr8.3:26878958-26878977 | None:intergenic | 25.0% |
| !! | ATTAGAATGATCGCATATTT+TGG | + | chr8.3:26882922-26882941 | None:intergenic | 25.0% |
| !!! | AACATTTCTCTAGTTTTTCA+TGG | - | chr8.3:26878973-26878992 | MS.gene87461:intron | 25.0% |
| !!! | AATCTTTGACTTTTGTGTTT+GGG | - | chr8.3:26881262-26881281 | MS.gene87461:intron | 25.0% |
| !!! | ACATTTCTCTAGTTTTTCAT+GGG | - | chr8.3:26878974-26878993 | MS.gene87461:intron | 25.0% |
| AAATAATCTGTTACAGTTCG+TGG | + | chr8.3:26882140-26882159 | None:intergenic | 30.0% | |
| AACATAATCTTCACATTAGG+AGG | + | chr8.3:26882400-26882419 | None:intergenic | 30.0% | |
| AATGCTTTCTTAAAAGACCT+GGG | - | chr8.3:26880482-26880501 | MS.gene87461:intron | 30.0% | |
| AGAAACTCAAGATTGGTATA+AGG | + | chr8.3:26881641-26881660 | None:intergenic | 30.0% | |
| AGTCTATCAAAAAGTTCTCT+AGG | - | chr8.3:26880424-26880443 | MS.gene87461:intron | 30.0% | |
| ATTATTGCCATGATCATCAA+AGG | + | chr8.3:26882736-26882755 | None:intergenic | 30.0% | |
| CAATCTCTATTAATAGGCAA+GGG | - | chr8.3:26883368-26883387 | MS.gene87461:intron | 30.0% | |
| CATGTTACAGACATGATATT+TGG | - | chr8.3:26882820-26882839 | MS.gene87461:intron | 30.0% | |
| CGTTTCTATTAAGTGTTTCT+CGG | - | chr8.3:26881885-26881904 | MS.gene87461:intron | 30.0% | |
| CTGACATATTATAAAAGAGG+GGG | + | chr8.3:26882875-26882894 | None:intergenic | 30.0% | |
| GAAACTCAAGATTGGTATAA+GGG | + | chr8.3:26881640-26881659 | None:intergenic | 30.0% | |
| GATAGCATATTATGTTACCT+TGG | + | chr8.3:26883228-26883247 | None:intergenic | 30.0% | |
| GTTGGGATCTTTATATTGAT+GGG | - | chr8.3:26882556-26882575 | MS.gene87461:intron | 30.0% | |
| TAAAATGGATGAAATTCCAC+AGG | - | chr8.3:26880024-26880043 | MS.gene87461:intron | 30.0% | |
| TAACATAAGCTGTAACTGTA+AGG | - | chr8.3:26881767-26881786 | MS.gene87461:intron | 30.0% | |
| TAGCAACCCAATATTGAAAA+AGG | + | chr8.3:26881069-26881088 | None:intergenic | 30.0% | |
| TATTTCCTTCTAGTATCAAG+AGG | + | chr8.3:26880061-26880080 | None:intergenic | 30.0% | |
| TCAATCTCTATTAATAGGCA+AGG | - | chr8.3:26883367-26883386 | MS.gene87461:intron | 30.0% | |
| TCATAAAATCTCTACTTCCT+AGG | - | chr8.3:26883282-26883301 | MS.gene87461:intron | 30.0% | |
| TGGATGAATAACTTCTGATT+TGG | - | chr8.3:26881168-26881187 | MS.gene87461:intron | 30.0% | |
| TGGTAAGTGTAACTATAACA+GGG | + | chr8.3:26883208-26883227 | None:intergenic | 30.0% | |
| TGTGTCAATATTTCATAGCT+TGG | - | chr8.3:26879337-26879356 | MS.gene87461:CDS | 30.0% | |
| TGTTATAGTTACACTTACCA+AGG | - | chr8.3:26883208-26883227 | MS.gene87461:intron | 30.0% | |
| TGTTGGGATCTTTATATTGA+TGG | - | chr8.3:26882555-26882574 | MS.gene87461:intron | 30.0% | |
| TTAGAGTCAATGTTCTATTC+TGG | - | chr8.3:26882094-26882113 | MS.gene87461:CDS | 30.0% | |
| TTGGTAAGTGTAACTATAAC+AGG | + | chr8.3:26883209-26883228 | None:intergenic | 30.0% | |
| ! | ACTTGCAAAAAGTACAATGA+GGG | + | chr8.3:26880882-26880901 | None:intergenic | 30.0% |
| ! | AGAGAACTTTTTGATAGACT+TGG | + | chr8.3:26880424-26880443 | None:intergenic | 30.0% |
| ! | ATATTACTCAAGTACTGTGA+CGG | - | chr8.3:26879919-26879938 | MS.gene87461:intron | 30.0% |
| ! | GATATGCAGTTGATATATAC+TGG | - | chr8.3:26881496-26881515 | MS.gene87461:intron | 30.0% |
| ! | GATTGGCTAAATTTGAGATA+TGG | + | chr8.3:26879111-26879130 | None:intergenic | 30.0% |
| ! | TACTTGCAAAAAGTACAATG+AGG | + | chr8.3:26880883-26880902 | None:intergenic | 30.0% |
| ! | TAGGGGTATATTTGTATTTC+AGG | + | chr8.3:26880735-26880754 | None:intergenic | 30.0% |
| !! | AAGAAAGCATTGATAGTTCA+GGG | + | chr8.3:26880473-26880492 | None:intergenic | 30.0% |
| !! | AATGAAAGCATTATTACCTG+AGG | + | chr8.3:26878457-26878476 | None:intergenic | 30.0% |
| !! | AATTTGAACCTTTGGAATAC+CGG | + | chr8.3:26883105-26883124 | None:intergenic | 30.0% |
| !! | AGGTGACAATAATGGATTTA+TGG | - | chr8.3:26882671-26882690 | MS.gene87461:intron | 30.0% |
| !! | ATCTTTGACTTTTGTGTTTG+GGG | - | chr8.3:26881263-26881282 | MS.gene87461:intron | 30.0% |
| !! | CAATCTTTGACTTTTGTGTT+TGG | - | chr8.3:26881261-26881280 | MS.gene87461:intron | 30.0% |
| !! | GTATCCCTAAAATTGCTTTT+GGG | + | chr8.3:26881698-26881717 | None:intergenic | 30.0% |
| !! | TAAGAAAGCATTGATAGTTC+AGG | + | chr8.3:26880474-26880493 | None:intergenic | 30.0% |
| !! | TTTTTGAGAACATTACTTGG+TGG | - | chr8.3:26878506-26878525 | MS.gene87461:CDS | 30.0% |
| !!! | AATATGTCAGTTTTGGGAAA+TGG | - | chr8.3:26882885-26882904 | MS.gene87461:intron | 30.0% |
| !!! | GTCCAATAGTTGTTGATTTT+TGG | + | chr8.3:26878822-26878841 | None:intergenic | 30.0% |
| AAAATCTCTACTTCCTAGGT+TGG | - | chr8.3:26883286-26883305 | MS.gene87461:intron | 35.0% | |
| AAAGTACAATGAGGGATACT+AGG | + | chr8.3:26880874-26880893 | None:intergenic | 35.0% | |
| AAATCCAATAGGTTCTGTGA+TGG | - | chr8.3:26881319-26881338 | MS.gene87461:intron | 35.0% | |
| AAATCTCTACTTCCTAGGTT+GGG | - | chr8.3:26883287-26883306 | MS.gene87461:intron | 35.0% | |
| AACAGGCATTAGTTACATCA+AGG | + | chr8.3:26883056-26883075 | None:intergenic | 35.0% | |
| AACCATTGACCACTTGTTTA+AGG | + | chr8.3:26881241-26881260 | None:intergenic | 35.0% | |
| AACTGATTGCAAGATCAGTT+AGG | + | chr8.3:26882964-26882983 | None:intergenic | 35.0% | |
| AAGTACAATGAGGGATACTA+GGG | + | chr8.3:26880873-26880892 | None:intergenic | 35.0% | |
| AATAAGCAAACCTCAAAAGC+TGG | + | chr8.3:26879826-26879845 | None:intergenic | 35.0% | |
| ACAAATATACCCCTATTGCT+TGG | - | chr8.3:26880740-26880759 | MS.gene87461:intron | 35.0% | |
| ACAGTATAGATATACGTTGC+TGG | - | chr8.3:26878928-26878947 | MS.gene87461:intron | 35.0% | |
| ACATATTATAAAAGAGGGGG+AGG | + | chr8.3:26882872-26882891 | None:intergenic | 35.0% | |
| ACCATATCAAGAATGACACT+TGG | + | chr8.3:26883436-26883455 | None:intergenic | 35.0% | |
| ACGTCTTCAACTTAAAGTGT+TGG | + | chr8.3:26878561-26878580 | None:intergenic | 35.0% | |
| AGTGAATCTTCAATTCGAGA+TGG | - | chr8.3:26881825-26881844 | MS.gene87461:intron | 35.0% | |
| ATAGTTCAGGGAGATAAAGA+AGG | + | chr8.3:26880461-26880480 | None:intergenic | 35.0% | |
| ATCAAAAAGTTCTCTAGGCA+TGG | - | chr8.3:26880429-26880448 | MS.gene87461:intron | 35.0% | |
| ATCCATTATTGTCACCTTTC+AGG | + | chr8.3:26882668-26882687 | None:intergenic | 35.0% | |
| ATTCAGTTACATATTGGGTG+TGG | + | chr8.3:26881720-26881739 | None:intergenic | 35.0% | |
| ATTTCCATCACAGAACCTAT+TGG | + | chr8.3:26881326-26881345 | None:intergenic | 35.0% | |
| CAAATATACCCCTATTGCTT+GGG | - | chr8.3:26880741-26880760 | MS.gene87461:intron | 35.0% | |
| CAACAAATTTCACCCAAGAA+TGG | + | chr8.3:26880981-26881000 | None:intergenic | 35.0% | |
| CAATGCTTTCTTAAAAGACC+TGG | - | chr8.3:26880481-26880500 | MS.gene87461:intron | 35.0% | |
| CAATTAAAAAGGAGGAAGAG+AGG | + | chr8.3:26879859-26879878 | None:intergenic | 35.0% | |
| CATTCTTGGGTGAAATTTGT+TGG | - | chr8.3:26880979-26880998 | MS.gene87461:intron | 35.0% | |
| CATTTCAATGCTTCATAGCT+TGG | - | chr8.3:26879199-26879218 | MS.gene87461:intron | 35.0% | |
| CTAATGCCTGTTATTCTTGT+AGG | - | chr8.3:26883064-26883083 | MS.gene87461:intron | 35.0% | |
| CTAGGGTTTAGACTGATTAT+TGG | + | chr8.3:26880836-26880855 | None:intergenic | 35.0% | |
| CTCATTTGTGATTCTTCTTC+AGG | + | chr8.3:26883337-26883356 | None:intergenic | 35.0% | |
| CTCGAATTGAAGATTCACTA+AGG | + | chr8.3:26881824-26881843 | None:intergenic | 35.0% | |
| GAACAATGTTTCATAGAAGG+TGG | - | chr8.3:26878355-26878374 | MS.gene87461:CDS | 35.0% | |
| GAATCTTTACTGTGTGCTAT+AGG | + | chr8.3:26881408-26881427 | None:intergenic | 35.0% | |
| GCATAAACCTTCCAAATTTG+AGG | - | chr8.3:26880160-26880179 | MS.gene87461:intron | 35.0% | |
| GGAGAACAATGTTTCATAGA+AGG | - | chr8.3:26878352-26878371 | MS.gene87461:CDS | 35.0% | |
| GGGGTCAAAATTAAAGTCTA+TGG | + | chr8.3:26879458-26879477 | None:intergenic | 35.0% | |
| GGGTATATTTGTATTTCAGG+CGG | + | chr8.3:26880732-26880751 | None:intergenic | 35.0% | |
| TACCTTAAACAAGTGGTCAA+TGG | - | chr8.3:26881236-26881255 | MS.gene87461:intron | 35.0% | |
| TAGTAGACCAAATTAGCCAT+AGG | + | chr8.3:26880186-26880205 | None:intergenic | 35.0% | |
| TCACATGTATTCATCAAGCT+GGG | + | chr8.3:26879392-26879411 | None:intergenic | 35.0% | |
| TGAACTTCTTGATAGGCAAA+TGG | - | chr8.3:26879527-26879546 | MS.gene87461:CDS | 35.0% | |
| TGAGTGAAGAAACTCAAGAT+TGG | + | chr8.3:26881648-26881667 | None:intergenic | 35.0% | |
| TGATATGTATATAGGGTCGA+GGG | - | chr8.3:26882295-26882314 | MS.gene87461:CDS | 35.0% | |
| TGGAGGGCAATAAAGTAAAA+AGG | + | chr8.3:26882487-26882506 | None:intergenic | 35.0% | |
| TGGTATTTATAGCCTGCTAT+GGG | + | chr8.3:26880789-26880808 | None:intergenic | 35.0% | |
| TTCTTGATAGGCAAATGGTT+CGG | - | chr8.3:26879532-26879551 | MS.gene87461:CDS | 35.0% | |
| TTGATATGTATATAGGGTCG+AGG | - | chr8.3:26882294-26882313 | MS.gene87461:CDS | 35.0% | |
| TTGTTGAAGGGAAGATTTGT+TGG | - | chr8.3:26882538-26882557 | MS.gene87461:intron | 35.0% | |
| TTTATGCAGTTTGACACATC+TGG | - | chr8.3:26883179-26883198 | MS.gene87461:intron | 35.0% | |
| ! | AAGAAAAATTTCACTGGCTG+GGG | + | chr8.3:26879477-26879496 | None:intergenic | 35.0% |
| ! | AGATCATCCTTTGATGATCA+TGG | - | chr8.3:26882726-26882745 | MS.gene87461:intron | 35.0% |
| ! | AGGGTTAAGTATCGTATTCT+AGG | + | chr8.3:26880854-26880873 | None:intergenic | 35.0% |
| ! | AGTTTTTCATGGGAATGGAT+TGG | - | chr8.3:26878984-26879003 | MS.gene87461:intron | 35.0% |
| ! | CAAGAAAAATTTCACTGGCT+GGG | + | chr8.3:26879478-26879497 | None:intergenic | 35.0% |
| ! | CCATTTTGCATAGAAACTTG+GGG | + | chr8.3:26880910-26880929 | None:intergenic | 35.0% |
| ! | GGGTTAAGTATCGTATTCTA+GGG | + | chr8.3:26880853-26880872 | None:intergenic | 35.0% |
| ! | GGTATCCCTAAAATTGCTTT+TGG | + | chr8.3:26881699-26881718 | None:intergenic | 35.0% |
| ! | TCAATTAAAAGTTGGCTCCT+TGG | + | chr8.3:26880296-26880315 | None:intergenic | 35.0% |
| ! | TCCAAGTGTCATTCTTGATA+TGG | - | chr8.3:26883432-26883451 | MS.gene87461:CDS | 35.0% |
| ! | TGTTGAAGGGAAGATTTGTT+GGG | - | chr8.3:26882539-26882558 | MS.gene87461:intron | 35.0% |
| ! | TTTTGTGTTTGGGGAAATTC+TGG | - | chr8.3:26881272-26881291 | MS.gene87461:intron | 35.0% |
| ! | TTTTTACTTTATTGCCCTCC+AGG | - | chr8.3:26882486-26882505 | MS.gene87461:intron | 35.0% |
| !! | CACTAAAGGTATCAAAGTCA+TGG | + | chr8.3:26879024-26879043 | None:intergenic | 35.0% |
| !! | GCCATTTTGCATAGAAACTT+GGG | + | chr8.3:26880911-26880930 | None:intergenic | 35.0% |
| !!! | TCTCTAGTTTTTCATGGGAA+TGG | - | chr8.3:26878979-26878998 | MS.gene87461:intron | 35.0% |
| !!! | TGCCATTTTGCATAGAAACT+TGG | + | chr8.3:26880912-26880931 | None:intergenic | 35.0% |
| AAACGACACAACTCAATAGG+TGG | - | chr8.3:26881004-26881023 | MS.gene87461:intron | 40.0% | |
| AAGCAGCCTACAAGAATAAC+AGG | + | chr8.3:26883073-26883092 | None:intergenic | 40.0% | |
| AATATAGTGCTTCCCAACCT+AGG | + | chr8.3:26883302-26883321 | None:intergenic | 40.0% | |
| ACTCCAGTTTGAACAAGGAT+AGG | + | chr8.3:26878430-26878449 | None:intergenic | 40.0% | |
| ACTCGGATACCTTAAACAAG+TGG | - | chr8.3:26881229-26881248 | MS.gene87461:intron | 40.0% | |
| ATAGGAAAGGGAGCAATGAT+GGG | + | chr8.3:26880245-26880264 | None:intergenic | 40.0% | |
| ATGAAATTCCACAGGAACAG+TGG | - | chr8.3:26880032-26880051 | MS.gene87461:intron | 40.0% | |
| CACATGTATTCATCAAGCTG+GGG | + | chr8.3:26879391-26879410 | None:intergenic | 40.0% | |
| CACATGTGGAGGAAGTAAAT+GGG | + | chr8.3:26880119-26880138 | None:intergenic | 40.0% | |
| CATTCTTGATATGGTATCCG+TGG | - | chr8.3:26883441-26883460 | MS.gene87461:CDS | 40.0% | |
| CCCCAAGTTTCTATGCAAAA+TGG | - | chr8.3:26880907-26880926 | MS.gene87461:intron | 40.0% | |
| CTCACATGTATTCATCAAGC+TGG | + | chr8.3:26879393-26879412 | None:intergenic | 40.0% | |
| CTCTAACACTCTCCATTCTT+GGG | - | chr8.3:26880966-26880985 | MS.gene87461:intron | 40.0% | |
| GAATGACTCCAGTTTGAACA+AGG | + | chr8.3:26878435-26878454 | None:intergenic | 40.0% | |
| GAATGATTATGGGGAAGCTA+TGG | + | chr8.3:26880351-26880370 | None:intergenic | 40.0% | |
| GATATGTATATAGGGTCGAG+GGG | - | chr8.3:26882296-26882315 | MS.gene87461:CDS | 40.0% | |
| GCAAGAAAAATTTCACTGGC+TGG | + | chr8.3:26879479-26879498 | None:intergenic | 40.0% | |
| GGATACCTCTTGATACTAGA+AGG | - | chr8.3:26880053-26880072 | MS.gene87461:intron | 40.0% | |
| GTGGTATTTATAGCCTGCTA+TGG | + | chr8.3:26880790-26880809 | None:intergenic | 40.0% | |
| TAGGAAACCGACATAGGAAA+GGG | + | chr8.3:26880257-26880276 | None:intergenic | 40.0% | |
| TATCCGAGTCTCTTTCTACT+TGG | + | chr8.3:26881218-26881237 | None:intergenic | 40.0% | |
| TATGTAAGTGCGTCATAGGT+TGG | - | chr8.3:26878692-26878711 | MS.gene87461:CDS | 40.0% | |
| TCAAACACTGACACGTAGAT+TGG | + | chr8.3:26879139-26879158 | None:intergenic | 40.0% | |
| TCACATGTGGAGGAAGTAAA+TGG | + | chr8.3:26880120-26880139 | None:intergenic | 40.0% | |
| TCTCTAACACTCTCCATTCT+TGG | - | chr8.3:26880965-26880984 | MS.gene87461:intron | 40.0% | |
| TGAAGTCATTGCTAGTGTGA+AGG | - | chr8.3:26879577-26879596 | MS.gene87461:intron | 40.0% | |
| TGCCTGAAAGGTGACAATAA+TGG | - | chr8.3:26882663-26882682 | MS.gene87461:intron | 40.0% | |
| TGTACATGTCTGTGAGTGTT+TGG | - | chr8.3:26879159-26879178 | MS.gene87461:intron | 40.0% | |
| TGTCTATGTAAGTGCGTCAT+AGG | - | chr8.3:26878688-26878707 | MS.gene87461:CDS | 40.0% | |
| TTAGCCATAGGCCTCAAATT+TGG | + | chr8.3:26880174-26880193 | None:intergenic | 40.0% | |
| TTAGGTGCTAAAAGTAGAGC+AGG | - | chr8.3:26882366-26882385 | MS.gene87461:intron | 40.0% | |
| TTGTGATTCTTCTTCAGGTG+TGG | + | chr8.3:26883332-26883351 | None:intergenic | 40.0% | |
| ! | ACCTATTGAGTTGTGTCGTT+TGG | + | chr8.3:26881005-26881024 | None:intergenic | 40.0% |
| ! | AGGTTTCTAGAAGCTAAGAG+AGG | + | chr8.3:26880702-26880721 | None:intergenic | 40.0% |
| ! | CGCACCCAAAAGCAATTTTA+GGG | - | chr8.3:26881691-26881710 | MS.gene87461:intron | 40.0% |
| ! | TAGAGGGCTTTTAAGCCTTT+AGG | + | chr8.3:26880596-26880615 | None:intergenic | 40.0% |
| ! | TGTTTGGGGAAATTCTGGTT+GGG | - | chr8.3:26881277-26881296 | MS.gene87461:intron | 40.0% |
| ! | TTGATGATTTGATCCCAACC+TGG | - | chr8.3:26878731-26878750 | MS.gene87461:CDS | 40.0% |
| ! | TTTCTAGAAGCTAAGAGAGG+CGG | + | chr8.3:26880699-26880718 | None:intergenic | 40.0% |
| ! | TTTGAGGCCTATGGCTAATT+TGG | - | chr8.3:26880176-26880195 | MS.gene87461:intron | 40.0% |
| !! | CAACTTAAAGTGTTGGTTGC+CGG | + | chr8.3:26878554-26878573 | None:intergenic | 40.0% |
| !! | CCTAAAATTGCTTTTGGGTG+CGG | + | chr8.3:26881693-26881712 | None:intergenic | 40.0% |
| !! | CCTCACTTGTTGTTGTTGAA+GGG | - | chr8.3:26882526-26882545 | MS.gene87461:intron | 40.0% |
| !! | GGCTTGTTGTTACTTCAGAT+GGG | - | chr8.3:26882577-26882596 | MS.gene87461:intron | 40.0% |
| !! | TCATAGGTTGGTACTTGCTA+GGG | - | chr8.3:26878704-26878723 | MS.gene87461:CDS | 40.0% |
| !! | TCCTCACTTGTTGTTGTTGA+AGG | - | chr8.3:26882525-26882544 | MS.gene87461:intron | 40.0% |
| AAAAGGCAGCATGTCACATG+TGG | + | chr8.3:26880133-26880152 | None:intergenic | 45.0% | |
| AAACACCTGACACTCACACA+TGG | + | chr8.3:26878760-26878779 | None:intergenic | 45.0% | |
| AACAACCCACACATAGACAC+TGG | + | chr8.3:26879311-26879330 | None:intergenic | 45.0% | |
| AAGTGTGAGATTGACCCTTC+TGG | + | chr8.3:26880514-26880533 | None:intergenic | 45.0% | |
| AATCAATTCCAGCACCTGGA+GGG | + | chr8.3:26882503-26882522 | None:intergenic | 45.0% | |
| ACAACCCACACATAGACACT+GGG | + | chr8.3:26879310-26879329 | None:intergenic | 45.0% | |
| ACTTTGTTCACTCACACAGC+TGG | - | chr8.3:26879986-26880005 | MS.gene87461:intron | 45.0% | |
| AGCTTGATGCAACCTGACAA+AGG | - | chr8.3:26879760-26879779 | MS.gene87461:intron | 45.0% | |
| ATCGAGACTTTCCCTTTGTC+AGG | + | chr8.3:26879775-26879794 | None:intergenic | 45.0% | |
| CATAGGAAAGGGAGCAATGA+TGG | + | chr8.3:26880246-26880265 | None:intergenic | 45.0% | |
| CATTGCTCCCTTTCCTATGT+CGG | - | chr8.3:26880247-26880266 | MS.gene87461:intron | 45.0% | |
| CCAAAGGTTCAAATTGCTGC+TGG | - | chr8.3:26883110-26883129 | MS.gene87461:intron | 45.0% | |
| CCAGCAGCAATTTGAACCTT+TGG | + | chr8.3:26883113-26883132 | None:intergenic | 45.0% | |
| CCATAGGCCTCAAATTTGGA+AGG | + | chr8.3:26880170-26880189 | None:intergenic | 45.0% | |
| CCCTTCAACAACAACAAGTG+AGG | + | chr8.3:26882529-26882548 | None:intergenic | 45.0% | |
| CGACCTATCCTTGTTCAAAC+TGG | - | chr8.3:26878424-26878443 | MS.gene87461:CDS | 45.0% | |
| CGGTGTCTACGTGTTAATGT+CGG | - | chr8.3:26878664-26878683 | MS.gene87461:CDS | 45.0% | |
| CTCTCTGTGTAAGTGCTTCA+TGG | - | chr8.3:26879245-26879264 | MS.gene87461:CDS | 45.0% | |
| GAACAATCAATTCCAGCACC+TGG | + | chr8.3:26882507-26882526 | None:intergenic | 45.0% | |
| GAGCAATACCGGTATTCCAA+AGG | - | chr8.3:26883094-26883113 | MS.gene87461:intron | 45.0% | |
| GCCAAACGACACAACTCAAT+AGG | - | chr8.3:26881001-26881020 | MS.gene87461:intron | 45.0% | |
| GCTCAAGATCTTCGTTGTGA+TGG | - | chr8.3:26878382-26878401 | MS.gene87461:CDS | 45.0% | |
| GCTTGATGCAACCTGACAAA+GGG | - | chr8.3:26879761-26879780 | MS.gene87461:intron | 45.0% | |
| GGGAATCTGTTAGATGCTCT+AGG | - | chr8.3:26882597-26882616 | MS.gene87461:intron | 45.0% | |
| GGTCCAAGTAGAAAGAGACT+CGG | - | chr8.3:26881212-26881231 | MS.gene87461:intron | 45.0% | |
| GGTGTCTACGTGTTAATGTC+GGG | - | chr8.3:26878665-26878684 | MS.gene87461:CDS | 45.0% | |
| GTAGGAAACCGACATAGGAA+AGG | + | chr8.3:26880258-26880277 | None:intergenic | 45.0% | |
| GTGTTTGGGGAAATTCTGGT+TGG | - | chr8.3:26881276-26881295 | MS.gene87461:intron | 45.0% | |
| GTTCAGGGAGATAAAGAAGG+TGG | + | chr8.3:26880458-26880477 | None:intergenic | 45.0% | |
| TAGGATACTGACACGTGTCA+GGG | + | chr8.3:26878598-26878617 | None:intergenic | 45.0% | |
| TATAATGGCCACACAAGTGC+AGG | - | chr8.3:26879720-26879739 | MS.gene87461:intron | 45.0% | |
| TCAAACTGGAGTCATTCCTC+AGG | - | chr8.3:26878438-26878457 | MS.gene87461:CDS | 45.0% | |
| TCAATTCGAGATGGCAGTGA+AGG | - | chr8.3:26881834-26881853 | MS.gene87461:intron | 45.0% | |
| TCATAGCTTGGCACTTGCAA+GGG | - | chr8.3:26879349-26879368 | MS.gene87461:intron | 45.0% | |
| TCATAGCTTGGCGCTTACAA+GGG | - | chr8.3:26879211-26879230 | MS.gene87461:intron | 45.0% | |
| TCATGGCTTGACACTTGCAA+GGG | - | chr8.3:26879262-26879281 | MS.gene87461:CDS | 45.0% | |
| TCGTCACTGACATCAACTTC+TGG | + | chr8.3:26883155-26883174 | None:intergenic | 45.0% | |
| TGCTTGGTTCCCAAGCAATA+GGG | + | chr8.3:26880753-26880772 | None:intergenic | 45.0% | |
| TGGAAGTCCTGAGTTTAGCT+CGG | + | chr8.3:26881555-26881574 | None:intergenic | 45.0% | |
| TTATAGCCTGCTATGGGCTT+GGG | + | chr8.3:26880783-26880802 | None:intergenic | 45.0% | |
| TTCATAGCTTGGCACTTGCA+AGG | - | chr8.3:26879348-26879367 | MS.gene87461:intron | 45.0% | |
| TTCATAGCTTGGCGCTTACA+AGG | - | chr8.3:26879210-26879229 | MS.gene87461:intron | 45.0% | |
| TTCATGGCTTGACACTTGCA+AGG | - | chr8.3:26879261-26879280 | MS.gene87461:CDS | 45.0% | |
| TTGCTTGGTTCCCAAGCAAT+AGG | + | chr8.3:26880754-26880773 | None:intergenic | 45.0% | |
| TTTATAGCCTGCTATGGGCT+TGG | + | chr8.3:26880784-26880803 | None:intergenic | 45.0% | |
| TTTGGGTGCGGAATCAGTAA+AGG | + | chr8.3:26881681-26881700 | None:intergenic | 45.0% | |
| ! | AAGTTGGCTCCTTGGTACTA+TGG | + | chr8.3:26880288-26880307 | None:intergenic | 45.0% |
| ! | AATAGGCAAGGGCACATATG+TGG | - | chr8.3:26883379-26883398 | MS.gene87461:intron | 45.0% |
| ! | AGAGTGTTAGAGAGCTTTGC+TGG | + | chr8.3:26880958-26880977 | None:intergenic | 45.0% |
| ! | CACGTAGATTGGCTCAAGAT+TGG | + | chr8.3:26879128-26879147 | None:intergenic | 45.0% |
| ! | CCGCACCCAAAAGCAATTTT+AGG | - | chr8.3:26881690-26881709 | MS.gene87461:intron | 45.0% |
| ! | CCTTCCAAATTTGAGGCCTA+TGG | - | chr8.3:26880167-26880186 | MS.gene87461:intron | 45.0% |
| ! | GCTCTTCAACGCTGTCTTTT+AGG | - | chr8.3:26882348-26882367 | MS.gene87461:intron | 45.0% |
| ! | GGCTTAAAAGCCCTCTAGAA+AGG | - | chr8.3:26880599-26880618 | MS.gene87461:intron | 45.0% |
| ! | GTATTTCAGGCGGTTTCTAG+AGG | + | chr8.3:26880722-26880741 | None:intergenic | 45.0% |
| ! | TAGGCTGCTTTGAGCAATAC+CGG | - | chr8.3:26883083-26883102 | MS.gene87461:intron | 45.0% |
| ! | TTGTCAGGTTGCATCAAGCT+TGG | + | chr8.3:26879760-26879779 | None:intergenic | 45.0% |
| !! | AGCGTTGAAGAGCATTTGAC+AGG | + | chr8.3:26882341-26882360 | None:intergenic | 45.0% |
| !! | GGGCTTGTTGTTACTTCAGA+TGG | - | chr8.3:26882576-26882595 | MS.gene87461:intron | 45.0% |
| !! | GGTTGGGAAGCACTATATTG+TGG | - | chr8.3:26883303-26883322 | MS.gene87461:intron | 45.0% |
| !! | GTCATAGGTTGGTACTTGCT+AGG | - | chr8.3:26878703-26878722 | MS.gene87461:CDS | 45.0% |
| !! | TTTATATTTAATTAAATTTC+TGG | - | chr8.3:26882157-26882176 | MS.gene87461:intron | 5.0% |
| !!! | ATAATTTTATATTTCATTTT+CGG | + | chr8.3:26882642-26882661 | None:intergenic | 5.0% |
| AAGTTCAGCCTGCACTTGTG+TGG | + | chr8.3:26879731-26879750 | None:intergenic | 50.0% | |
| AATTCATCCATACCCCTCCG+TGG | - | chr8.3:26880205-26880224 | MS.gene87461:intron | 50.0% | |
| ACACAAGTGCAGGCTGAACT+TGG | - | chr8.3:26879730-26879749 | MS.gene87461:intron | 50.0% | |
| ACGTGAGGACCATAGTACCA+AGG | - | chr8.3:26880276-26880295 | MS.gene87461:intron | 50.0% | |
| AGGGCTTAGAGCCTTTCTAG+AGG | + | chr8.3:26880613-26880632 | None:intergenic | 50.0% | |
| AGTTGACATCCATACCACGG+AGG | + | chr8.3:26880222-26880241 | None:intergenic | 50.0% | |
| ATATGTGGCGTGACCAAACG+AGG | - | chr8.3:26883394-26883413 | MS.gene87461:intron | 50.0% | |
| ATCAAGCTGGGGCCAAATCA+TGG | + | chr8.3:26879380-26879399 | None:intergenic | 50.0% | |
| ATGCCCTGAGAATGCTCTCA+AGG | + | chr8.3:26880813-26880832 | None:intergenic | 50.0% | |
| CAATCAATTCCAGCACCTGG+AGG | + | chr8.3:26882504-26882523 | None:intergenic | 50.0% | |
| CAGGGAGATAAAGAAGGTGG+AGG | + | chr8.3:26880455-26880474 | None:intergenic | 50.0% | |
| CAGGTCTGCTGACAACCAAT+CGG | + | chr8.3:26882322-26882341 | None:intergenic | 50.0% | |
| CAGTGTCACGCTATGAAGCA+CGG | + | chr8.3:26879419-26879438 | None:intergenic | 50.0% | |
| CTCACGTAGGAAACCGACAT+AGG | + | chr8.3:26880263-26880282 | None:intergenic | 50.0% | |
| CTCGCTTACATGCTTAGCCA+CGG | + | chr8.3:26883461-26883480 | None:intergenic | 50.0% | |
| GCTTGGTTCCCAAGCAATAG+GGG | + | chr8.3:26880752-26880771 | None:intergenic | 50.0% | |
| GGGAGTTGACATCCATACCA+CGG | + | chr8.3:26880225-26880244 | None:intergenic | 50.0% | |
| GGGCTTAGAGCCTTTCTAGA+GGG | + | chr8.3:26880612-26880631 | None:intergenic | 50.0% | |
| GGTTCGGCAAGAGTCAGAAT+TGG | - | chr8.3:26879548-26879567 | MS.gene87461:intron | 50.0% | |
| GTAGGATACTGACACGTGTC+AGG | + | chr8.3:26878599-26878618 | None:intergenic | 50.0% | |
| GTGAGATTGACCCTTCTGGA+GGG | + | chr8.3:26880510-26880529 | None:intergenic | 50.0% | |
| GTTGACATCCATACCACGGA+GGG | + | chr8.3:26880221-26880240 | None:intergenic | 50.0% | |
| TCAAGCTGGGGCCAAATCAT+GGG | + | chr8.3:26879379-26879398 | None:intergenic | 50.0% | |
| TCACACATGGACACCAGGTT+GGG | + | chr8.3:26878747-26878766 | None:intergenic | 50.0% | |
| TGCCCTGAGAATGCTCTCAA+GGG | + | chr8.3:26880812-26880831 | None:intergenic | 50.0% | |
| TGGTACTATGGTCCTCACGT+AGG | + | chr8.3:26880276-26880295 | None:intergenic | 50.0% | |
| TGTGAGATTGACCCTTCTGG+AGG | + | chr8.3:26880511-26880530 | None:intergenic | 50.0% | |
| TTGACATCCATACCACGGAG+GGG | + | chr8.3:26880220-26880239 | None:intergenic | 50.0% | |
| TTGTCCCAAGACTCGTGCTT+GGG | - | chr8.3:26880547-26880566 | MS.gene87461:intron | 50.0% | |
| ! | GAAGTCCTGAGTTTAGCTCG+GGG | + | chr8.3:26881553-26881572 | None:intergenic | 50.0% |
| ! | GACTGCAGAACCAGCTTTTG+AGG | - | chr8.3:26879813-26879832 | MS.gene87461:intron | 50.0% |
| ! | GGAAGTCCTGAGTTTAGCTC+GGG | + | chr8.3:26881554-26881573 | None:intergenic | 50.0% |
| !! | AGAGGTATCCACTGTTCCTG+TGG | + | chr8.3:26880043-26880062 | None:intergenic | 50.0% |
| !! | CACCCTTGAGAGCATTCTCA+GGG | - | chr8.3:26880807-26880826 | MS.gene87461:intron | 50.0% |
| !! | CTATGTCGGTTTCCTACGTG+AGG | - | chr8.3:26880261-26880280 | MS.gene87461:intron | 50.0% |
| !! | GCAAGGGTGTTCCCATGATT+TGG | - | chr8.3:26879365-26879384 | MS.gene87461:intron | 50.0% |
| !! | GGCACTGATTGCTGCCTTTA+GGG | - | chr8.3:26880324-26880343 | MS.gene87461:intron | 50.0% |
| !! | TGGCACTGATTGCTGCCTTT+AGG | - | chr8.3:26880323-26880342 | MS.gene87461:intron | 50.0% |
| AATGGCACTGCCCACTGCTT+AGG | - | chr8.3:26880925-26880944 | MS.gene87461:intron | 55.0% | |
| AGGCAGCATGTCACATGTGG+AGG | + | chr8.3:26880130-26880149 | None:intergenic | 55.0% | |
| ATCCATACCACGGAGGGGTA+TGG | + | chr8.3:26880215-26880234 | None:intergenic | 55.0% | |
| ATCCATACCCCTCCGTGGTA+TGG | - | chr8.3:26880210-26880229 | MS.gene87461:intron | 55.0% | |
| CAAGCACGAGTCTTGGGACA+AGG | + | chr8.3:26880548-26880567 | None:intergenic | 55.0% | |
| CACACATAGACACTGGGCTG+GGG | + | chr8.3:26879304-26879323 | None:intergenic | 55.0% | |
| CCACACATAGACACTGGGCT+GGG | + | chr8.3:26879305-26879324 | None:intergenic | 55.0% | |
| CCAGCCCAGTGTCTATGTGT+GGG | - | chr8.3:26879303-26879322 | MS.gene87461:CDS | 55.0% | |
| CCTGAGAATGCTCTCAAGGG+TGG | + | chr8.3:26880809-26880828 | None:intergenic | 55.0% | |
| CTCACACATGGACACCAGGT+TGG | + | chr8.3:26878748-26878767 | None:intergenic | 55.0% | |
| CTTGTCCCAAGACTCGTGCT+TGG | - | chr8.3:26880546-26880565 | MS.gene87461:intron | 55.0% | |
| CTTTATTGCCCTCCAGGTGC+TGG | - | chr8.3:26882492-26882511 | MS.gene87461:intron | 55.0% | |
| GACACTCACACATGGACACC+AGG | + | chr8.3:26878752-26878771 | None:intergenic | 55.0% | |
| GGGACAGGATGTAGCTCACA+AGG | + | chr8.3:26881533-26881552 | None:intergenic | 55.0% | |
| GGGGAAGCTATGGACCCTAA+AGG | + | chr8.3:26880341-26880360 | None:intergenic | 55.0% | |
| GGTGTCCATGTGTGAGTGTC+AGG | - | chr8.3:26878752-26878771 | MS.gene87461:CDS | 55.0% | |
| TAAGCCCTCCAGAATGGCTC+AGG | - | chr8.3:26880625-26880644 | MS.gene87461:intron | 55.0% | |
| TGGCACCTCACCTAAGCAGT+GGG | + | chr8.3:26880938-26880957 | None:intergenic | 55.0% | |
| TGTCCCAAGACTCGTGCTTG+GGG | - | chr8.3:26880548-26880567 | MS.gene87461:intron | 55.0% | |
| ! | CTGGGCTGGGGTCAAATCAT+CGG | + | chr8.3:26879292-26879311 | None:intergenic | 55.0% |
| ! | TGGGCTGGGGTCAAATCATC+GGG | + | chr8.3:26879291-26879310 | None:intergenic | 55.0% |
| !! | AGGCTCTAAGCCCTCCAGAA+TGG | - | chr8.3:26880619-26880638 | MS.gene87461:intron | 55.0% |
| !! | CCACCCTTGAGAGCATTCTC+AGG | - | chr8.3:26880806-26880825 | MS.gene87461:intron | 55.0% |
| AGACCTGGGTACCCTCCAGA+AGG | - | chr8.3:26880496-26880515 | MS.gene87461:intron | 60.0% | |
| CACTGCCCACTGCTTAGGTG+AGG | - | chr8.3:26880930-26880949 | MS.gene87461:intron | 60.0% | |
| CCCACACATAGACACTGGGC+TGG | + | chr8.3:26879306-26879325 | None:intergenic | 60.0% | |
| CCCAGCCCAGTGTCTATGTG+TGG | - | chr8.3:26879302-26879321 | MS.gene87461:CDS | 60.0% | |
| CCTGCTATGGGCTTGGGTCT+CGG | + | chr8.3:26880777-26880796 | None:intergenic | 60.0% | |
| CCTGTCCCCGAGCTAAACTC+AGG | - | chr8.3:26881545-26881564 | MS.gene87461:intron | 60.0% | |
| CGTGACCAAACGAGGAGGTG+CGG | - | chr8.3:26883402-26883421 | MS.gene87461:intron | 60.0% | |
| CTGGCACCTCACCTAAGCAG+TGG | + | chr8.3:26880939-26880958 | None:intergenic | 60.0% | |
| GACCTGGGTACCCTCCAGAA+GGG | - | chr8.3:26880497-26880516 | MS.gene87461:intron | 60.0% | |
| GTCCCAAGACTCGTGCTTGG+GGG | - | chr8.3:26880549-26880568 | MS.gene87461:intron | 60.0% | |
| TATAGGGTCGAGGGGCCGAT+TGG | - | chr8.3:26882304-26882323 | MS.gene87461:CDS | 60.0% | |
| TCCCAAGACTCGTGCTTGGG+GGG | - | chr8.3:26880550-26880569 | MS.gene87461:intron | 60.0% | |
| TGTGGCGTGACCAAACGAGG+AGG | - | chr8.3:26883397-26883416 | MS.gene87461:intron | 60.0% | |
| ! | CCTGAGTTTAGCTCGGGGAC+AGG | + | chr8.3:26881548-26881567 | None:intergenic | 60.0% |
| ! | GTGACCAAACGAGGAGGTGC+GGG | - | chr8.3:26883403-26883422 | MS.gene87461:intron | 60.0% |
| ! | TGACCAAACGAGGAGGTGCG+GGG | - | chr8.3:26883404-26883423 | MS.gene87461:intron | 60.0% |
| AGCCCCCCAAGCACGAGTCT+TGG | + | chr8.3:26880555-26880574 | None:intergenic | 65.0% | |
| CAGAAGGGCTCCTGAGGCCT+AGG | - | chr8.3:26880655-26880674 | MS.gene87461:intron | 65.0% | |
| CCGAGACCCAAGCCCATAGC+AGG | - | chr8.3:26880774-26880793 | MS.gene87461:intron | 65.0% | |
| CTAAGAGAGGCGGCGCCCTA+AGG | + | chr8.3:26880689-26880708 | None:intergenic | 65.0% | |
| CTAGGCCTCAGGAGCCCTTC+TGG | + | chr8.3:26880657-26880676 | None:intergenic | 65.0% | |
| GCCCCCCAAGCACGAGTCTT+GGG | + | chr8.3:26880554-26880573 | None:intergenic | 65.0% | |
| GCCTAGGCGCACCCACCTTA+GGG | - | chr8.3:26880671-26880690 | MS.gene87461:intron | 65.0% | |
| GCCTCAGGAGCCCTTCTGGA+GGG | + | chr8.3:26880653-26880672 | None:intergenic | 65.0% | |
| GGCGCCTGAGCCATTCTGGA+GGG | + | chr8.3:26880632-26880651 | None:intergenic | 65.0% | |
| GGGCTTGGGTCTCGGTTGCT+TGG | + | chr8.3:26880769-26880788 | None:intergenic | 65.0% | |
| !! | GACCCTTCTGGAGGGTACCC+AGG | + | chr8.3:26880502-26880521 | None:intergenic | 65.0% |
| AGAGAGGCGGCGCCCTAAGG+TGG | + | chr8.3:26880686-26880705 | None:intergenic | 70.0% | |
| CAGCCCCGCACCTCCTCGTT+TGG | + | chr8.3:26883410-26883429 | None:intergenic | 70.0% | |
| GAGAGGCGGCGCCCTAAGGT+GGG | + | chr8.3:26880685-26880704 | None:intergenic | 70.0% | |
| GCCCTAAGGTGGGTGCGCCT+AGG | + | chr8.3:26880675-26880694 | None:intergenic | 70.0% | |
| GCCCTCCAGAAGGGCTCCTG+AGG | - | chr8.3:26880649-26880668 | MS.gene87461:intron | 70.0% | |
| GGCCTAGGCGCACCCACCTT+AGG | - | chr8.3:26880670-26880689 | MS.gene87461:intron | 70.0% | |
| GGCCTCAGGAGCCCTTCTGG+AGG | + | chr8.3:26880654-26880673 | None:intergenic | 70.0% | |
| GGCTCAGGCGCCCTCCAGAA+GGG | - | chr8.3:26880640-26880659 | MS.gene87461:intron | 70.0% | |
| GGGCGCCTGAGCCATTCTGG+AGG | + | chr8.3:26880633-26880652 | None:intergenic | 70.0% | |
| TGGCTCAGGCGCCCTCCAGA+AGG | - | chr8.3:26880639-26880658 | MS.gene87461:intron | 70.0% | |
| ! | CAAACGAGGAGGTGCGGGGC+TGG | - | chr8.3:26883408-26883427 | MS.gene87461:intron | 70.0% |
| !! | GGAGGGCGCCTGAGCCATTC+TGG | + | chr8.3:26880636-26880655 | None:intergenic | 70.0% |
| GGTGGGTGCGCCTAGGCCTC+AGG | + | chr8.3:26880668-26880687 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.3 | gene | 26878334 | 26883540 | 26878334 | ID=MS.gene87461 |
| chr8.3 | mRNA | 26878334 | 26883540 | 26878334 | ID=MS.gene87461.t1;Parent=MS.gene87461 |
| chr8.3 | exon | 26883415 | 26883540 | 26883415 | ID=MS.gene87461.t1.exon1;Parent=MS.gene87461.t1 |
| chr8.3 | CDS | 26883415 | 26883540 | 26883415 | ID=cds.MS.gene87461.t1;Parent=MS.gene87461.t1 |
| chr8.3 | exon | 26882276 | 26882332 | 26882276 | ID=MS.gene87461.t1.exon2;Parent=MS.gene87461.t1 |
| chr8.3 | CDS | 26882276 | 26882332 | 26882276 | ID=cds.MS.gene87461.t1;Parent=MS.gene87461.t1 |
| chr8.3 | exon | 26882040 | 26882132 | 26882040 | ID=MS.gene87461.t1.exon3;Parent=MS.gene87461.t1 |
| chr8.3 | CDS | 26882040 | 26882132 | 26882040 | ID=cds.MS.gene87461.t1;Parent=MS.gene87461.t1 |
| chr8.3 | exon | 26879487 | 26879565 | 26879487 | ID=MS.gene87461.t1.exon4;Parent=MS.gene87461.t1 |
| chr8.3 | CDS | 26879487 | 26879565 | 26879487 | ID=cds.MS.gene87461.t1;Parent=MS.gene87461.t1 |
| chr8.3 | exon | 26879242 | 26879366 | 26879242 | ID=MS.gene87461.t1.exon5;Parent=MS.gene87461.t1 |
| chr8.3 | CDS | 26879242 | 26879366 | 26879242 | ID=cds.MS.gene87461.t1;Parent=MS.gene87461.t1 |
| chr8.3 | exon | 26878645 | 26878788 | 26878645 | ID=MS.gene87461.t1.exon6;Parent=MS.gene87461.t1 |
| chr8.3 | CDS | 26878645 | 26878788 | 26878645 | ID=cds.MS.gene87461.t1;Parent=MS.gene87461.t1 |
| chr8.3 | exon | 26878334 | 26878570 | 26878334 | ID=MS.gene87461.t1.exon7;Parent=MS.gene87461.t1 |
| chr8.3 | CDS | 26878334 | 26878570 | 26878334 | ID=cds.MS.gene87461.t1;Parent=MS.gene87461.t1 |
| Gene Sequence |
| Protein sequence |
