Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene004697.t1 | XP_003590705.2 | 95.1 | 993 | 47 | 2 | 1 | 992 | 3 | 994 | 0.00E+00 | 1813.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene004697.t1 | A4FUF0 | 34.1 | 91 | 56 | 2 | 362 | 452 | 8 | 94 | 1.4e-06 | 57.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene004697.t1 | G7I2L8 | 95.1 | 993 | 47 | 2 | 1 | 992 | 3 | 994 | 0.0e+00 | 1813.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene004697 | MS.gene79130 | PPI |
| MS.gene004697 | MS.gene77911 | PPI |
| MS.gene004697 | MS.gene92710 | PPI |
| MS.gene004697 | MS.gene067033 | PPI |
| MS.gene004697 | MS.gene007196 | PPI |
| MS.gene004697 | MS.gene75575 | PPI |
| MS.gene004697 | MS.gene24697 | PPI |
| MS.gene004697 | MS.gene045235 | PPI |
| MS.gene004697 | MS.gene045232 | PPI |
| MS.gene004697 | MS.gene55120 | PPI |
| MS.gene004697 | MS.gene46640 | PPI |
| MS.gene004697 | MS.gene050299 | PPI |
| MS.gene004697 | MS.gene045233 | PPI |
| MS.gene004697 | MS.gene95527 | PPI |
| MS.gene004697 | MS.gene037044 | PPI |
| MS.gene004697 | MS.gene07741 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene004697.t1 | MTR_1g072780 | 95.065 | 993 | 47 | 2 | 1 | 992 | 3 | 994 | 0.0 | 1892 |
| MS.gene004697.t1 | MTR_1g049120 | 54.639 | 679 | 246 | 14 | 353 | 992 | 283 | 938 | 0.0 | 655 |
| MS.gene004697.t1 | MTR_4g036445 | 50.000 | 374 | 160 | 10 | 311 | 667 | 255 | 618 | 1.59e-106 | 345 |
| MS.gene004697.t1 | MTR_2g104120 | 32.339 | 637 | 330 | 17 | 360 | 963 | 258 | 826 | 3.44e-79 | 276 |
| MS.gene004697.t1 | MTR_2g047912 | 44.125 | 417 | 193 | 13 | 560 | 966 | 286 | 672 | 3.83e-79 | 272 |
| MS.gene004697.t1 | MTR_1g066890 | 47.598 | 229 | 99 | 4 | 357 | 583 | 315 | 524 | 1.92e-58 | 218 |
| MS.gene004697.t1 | MTR_1g066890 | 50.538 | 93 | 43 | 1 | 874 | 963 | 810 | 902 | 3.43e-19 | 94.0 |
| MS.gene004697.t1 | MTR_2g104980 | 46.452 | 155 | 57 | 2 | 356 | 505 | 224 | 357 | 9.28e-39 | 151 |
| MS.gene004697.t1 | MTR_6g005840 | 37.500 | 184 | 112 | 3 | 360 | 542 | 272 | 453 | 1.21e-28 | 124 |
| MS.gene004697.t1 | MTR_6g005840 | 37.500 | 184 | 112 | 3 | 360 | 542 | 230 | 411 | 1.49e-28 | 124 |
| MS.gene004697.t1 | MTR_6g005960 | 37.500 | 184 | 112 | 3 | 360 | 542 | 212 | 393 | 7.24e-27 | 117 |
| MS.gene004697.t1 | MTR_7g113180 | 33.146 | 178 | 116 | 3 | 360 | 534 | 87 | 264 | 1.22e-24 | 111 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene004697.t1 | AT3G09670 | 52.083 | 192 | 91 | 1 | 359 | 549 | 196 | 387 | 5.98e-59 | 216 |
| MS.gene004697.t1 | AT3G09670 | 52.083 | 192 | 91 | 1 | 359 | 549 | 196 | 387 | 5.98e-59 | 216 |
| MS.gene004697.t1 | AT5G02950 | 47.619 | 189 | 98 | 1 | 352 | 539 | 87 | 275 | 5.67e-52 | 194 |
| MS.gene004697.t1 | AT5G02950 | 56.098 | 82 | 36 | 0 | 880 | 961 | 542 | 623 | 1.35e-19 | 94.7 |
| MS.gene004697.t1 | AT5G02950 | 47.619 | 189 | 98 | 1 | 352 | 539 | 87 | 275 | 5.67e-52 | 194 |
| MS.gene004697.t1 | AT5G02950 | 56.098 | 82 | 36 | 0 | 880 | 961 | 542 | 623 | 1.35e-19 | 94.7 |
| MS.gene004697.t1 | AT3G54760 | 35.185 | 324 | 161 | 8 | 663 | 979 | 472 | 753 | 1.55e-42 | 167 |
| MS.gene004697.t1 | AT3G54760 | 35.185 | 324 | 161 | 8 | 663 | 979 | 503 | 784 | 2.26e-42 | 167 |
| MS.gene004697.t1 | AT5G40340 | 41.209 | 182 | 101 | 6 | 360 | 538 | 125 | 303 | 1.11e-28 | 124 |
| MS.gene004697.t1 | AT5G40340 | 41.209 | 182 | 101 | 6 | 360 | 538 | 125 | 303 | 1.38e-28 | 124 |
| MS.gene004697.t1 | AT5G27650 | 33.880 | 183 | 108 | 4 | 360 | 534 | 171 | 348 | 2.54e-22 | 104 |
| MS.gene004697.t1 | AT3G05430 | 40.179 | 112 | 67 | 0 | 360 | 471 | 133 | 244 | 1.84e-21 | 101 |
| MS.gene004697.t1 | AT3G05430 | 40.179 | 112 | 67 | 0 | 360 | 471 | 133 | 244 | 1.84e-21 | 101 |
| MS.gene004697.t1 | AT3G27860 | 31.864 | 295 | 161 | 13 | 357 | 634 | 58 | 329 | 1.81e-18 | 91.3 |
| MS.gene004697.t1 | AT3G27860 | 31.864 | 295 | 161 | 13 | 357 | 634 | 58 | 329 | 1.81e-18 | 91.3 |
| MS.gene004697.t1 | AT3G48187 | 26.178 | 191 | 116 | 5 | 360 | 545 | 106 | 276 | 1.94e-11 | 68.9 |
Find 240 sgRNAs with CRISPR-Local
Find 280 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGCTATTTGGTAGCATATTA+TGG | 0.149078 | 1.1:+54891178 | MS.gene004697:CDS |
| AGCAATAGTCTTTCGTTTCT+TGG | 0.161677 | 1.1:-54891914 | None:intergenic |
| GTCAAAAGACGGGTCGAATT+TGG | 0.171080 | 1.1:+54891325 | MS.gene004697:CDS |
| GCTAAACAGTTCAACATATT+TGG | 0.174863 | 1.1:+54892816 | MS.gene004697:CDS |
| TGGAGGAGTTGAAGGGTTTC+AGG | 0.180597 | 1.1:+54890199 | MS.gene004697:CDS |
| GGAGTTTCTTCTCTGATTTC+AGG | 0.181757 | 1.1:+54892295 | MS.gene004697:CDS |
| ACAAAACAATCATTTAAAAT+TGG | 0.214750 | 1.1:+54892009 | MS.gene004697:CDS |
| TTCTGAGTCTCCTCAAAATT+AGG | 0.233682 | 1.1:-54892162 | None:intergenic |
| GGACTTGGTAGTTGGGGTTT+TGG | 0.236358 | 1.1:+54890073 | MS.gene004697:CDS |
| CCCTCTATGTTGAAATATTC+TGG | 0.237737 | 1.1:+54892072 | MS.gene004697:CDS |
| TTTATCAGTATCATTAATTA+AGG | 0.246050 | 1.1:-54891653 | None:intergenic |
| TTCTGTGAATGATCTGGTTT+GGG | 0.252633 | 1.1:+54891066 | MS.gene004697:CDS |
| TCTGTCTCAGATTCCTTTAA+AGG | 0.257461 | 1.1:-54892720 | None:intergenic |
| GGAGGAGGTAGATGAAATAT+TGG | 0.257832 | 1.1:+54890517 | MS.gene004697:CDS |
| AAAGCCTCCAGTTGGAAAAT+TGG | 0.259834 | 1.1:-54891515 | None:intergenic |
| TATAGTTTCTTGAATGTTAT+AGG | 0.262506 | 1.1:+54892273 | MS.gene004697:CDS |
| CTACAAAAGTTGGCACTAAA+AGG | 0.274187 | 1.1:+54892361 | MS.gene004697:CDS |
| GCTTGCATTCTACCGGTTAA+AGG | 0.276515 | 1.1:+54891573 | MS.gene004697:CDS |
| TCACAGGAAGAGAAGGAAAT+TGG | 0.277243 | 1.1:+54890779 | MS.gene004697:CDS |
| TCAGACAAAGAGAAGGAAAT+TGG | 0.297811 | 1.1:+54890935 | MS.gene004697:CDS |
| GCCGATGCGCAAGCTGCTTT+CGG | 0.300794 | 1.1:+54892789 | MS.gene004697:CDS |
| TTCTTCTGCCTTTCACCCTT+GGG | 0.310129 | 1.1:-54891954 | None:intergenic |
| TTTCTTCTGCCTTTCACCCT+TGG | 0.316743 | 1.1:-54891955 | None:intergenic |
| TCATCAAAGTCAAATGTTTC+AGG | 0.317862 | 1.1:-54892408 | None:intergenic |
| ATCATTGTGGCCAGTGATCC+TGG | 0.318358 | 1.1:+54892324 | MS.gene004697:CDS |
| AACATTTGACTTTGATGATC+TGG | 0.323353 | 1.1:+54892413 | MS.gene004697:CDS |
| GATGAGTGATGATGTTATTC+AGG | 0.328343 | 1.1:+54890868 | MS.gene004697:CDS |
| TGTTCCAGGAAACAGTATTT+TGG | 0.330526 | 1.1:+54892558 | MS.gene004697:CDS |
| TGATGAGTGGTGATGTTATT+CGG | 0.331158 | 1.1:+54890708 | MS.gene004697:CDS |
| TCTGAGTCTCCTCAAAATTA+GGG | 0.332007 | 1.1:-54892161 | None:intergenic |
| GCTACCAAAATACTGTTTCC+TGG | 0.332567 | 1.1:-54892562 | None:intergenic |
| ACCTCCACAATATTGTAATT+CGG | 0.343928 | 1.1:-54891611 | None:intergenic |
| ATTACAATATTGTGGAGGTT+TGG | 0.350069 | 1.1:+54891615 | MS.gene004697:CDS |
| GCTATTTGGTAGCATATTAT+GGG | 0.350097 | 1.1:+54891179 | MS.gene004697:CDS |
| CCTCCACAATATTGTAATTC+GGG | 0.351991 | 1.1:-54891610 | None:intergenic |
| ATCTTGTCATAAGTATCTTT+AGG | 0.354335 | 1.1:-54891367 | None:intergenic |
| TTATGACAAGATTAAACTTC+AGG | 0.357337 | 1.1:+54891378 | MS.gene004697:CDS |
| TTTCTGTGAATGATCTGGTT+TGG | 0.357507 | 1.1:+54891065 | MS.gene004697:CDS |
| GGTCTAAGCTGAAGTCCTTT+AGG | 0.367030 | 1.1:+54891227 | MS.gene004697:CDS |
| ATAGTTTCTTGAATGTTATA+GGG | 0.367131 | 1.1:+54892274 | MS.gene004697:CDS |
| CAAGTTGTTGGGTCATTAGA+AGG | 0.367450 | 1.1:+54890419 | MS.gene004697:CDS |
| CATGTCCCCATGAAGAGTTC+AGG | 0.376926 | 1.1:+54891019 | MS.gene004697:CDS |
| TCAAAAGACGGGTCGAATTT+GGG | 0.377860 | 1.1:+54891326 | MS.gene004697:CDS |
| TTCAGGGTTCTCAAGCTGTT+GGG | 0.378938 | 1.1:+54890216 | MS.gene004697:CDS |
| AGGTTGAGGGATCTATGGTT+AGG | 0.385375 | 1.1:+54890036 | MS.gene004697:CDS |
| CTGAGAAGGACTTGGTAGTT+GGG | 0.388392 | 1.1:+54890066 | MS.gene004697:CDS |
| TATAGAGGTTGAGGGATCTA+TGG | 0.388781 | 1.1:+54890031 | MS.gene004697:CDS |
| CGAGAATGAGGTAGTTGAGT+TGG | 0.391904 | 1.1:+54890448 | MS.gene004697:CDS |
| AAAGATGTGGGTCTTACTAT+TGG | 0.392531 | 1.1:+54890179 | MS.gene004697:CDS |
| ATAGATCCCTCAACCTCTAT+AGG | 0.393157 | 1.1:-54890029 | None:intergenic |
| CTTGCATTCTACCGGTTAAA+GGG | 0.397273 | 1.1:+54891574 | MS.gene004697:CDS |
| TCCTCCTCCTATAGAGGTTG+AGG | 0.401389 | 1.1:+54890022 | MS.gene004697:CDS |
| AAGTATTCCATAAGCTTCTC+AGG | 0.401659 | 1.1:-54891481 | None:intergenic |
| CTTACTATTGGAGGAGTTGA+AGG | 0.406138 | 1.1:+54890191 | MS.gene004697:CDS |
| TTTCAGGGTTCTCAAGCTGT+TGG | 0.406912 | 1.1:+54890215 | MS.gene004697:CDS |
| TGAGAAGGAGGTAGTTGAGT+TGG | 0.407945 | 1.1:+54890256 | MS.gene004697:CDS |
| TAATCACTGTGGGTAGAATC+TGG | 0.412595 | 1.1:-54891844 | None:intergenic |
| GATGAGTGGTGATGTTATTC+GGG | 0.414067 | 1.1:+54890709 | MS.gene004697:CDS |
| AACTGGAGGCTTTGATCGAT+TGG | 0.414850 | 1.1:+54891525 | MS.gene004697:CDS |
| AGTTATTGATGGCGAAGAAC+AGG | 0.416171 | 1.1:+54890652 | MS.gene004697:CDS |
| AGGGTTGCTAGCCAACTTAC+TGG | 0.421445 | 1.1:+54892045 | MS.gene004697:CDS |
| ATTTAATGATGCCGAAGAAC+AGG | 0.424640 | 1.1:+54890967 | MS.gene004697:CDS |
| AGGAGGAGGAGGATTGTCTA+GGG | 0.427731 | 1.1:-54890006 | None:intergenic |
| AAGAAACTATAATCTCCCTT+TGG | 0.428080 | 1.1:-54892261 | None:intergenic |
| AAAATACTGTTTCCTGGAAC+AGG | 0.428323 | 1.1:-54892556 | None:intergenic |
| GAGGAGGAGGAGGATTGTCT+AGG | 0.428538 | 1.1:-54890007 | None:intergenic |
| GAAGGGACGCGCTCATAGTC+TGG | 0.429237 | 1.1:-54892495 | None:intergenic |
| GGAGACAAAGAAGTTATTGA+TGG | 0.433349 | 1.1:+54890641 | MS.gene004697:CDS |
| AGTTGGTATTTCTGAGAAGA+TGG | 0.434726 | 1.1:+54890751 | MS.gene004697:CDS |
| GGTTGAGGGATCTATGGTTA+GGG | 0.436877 | 1.1:+54890037 | MS.gene004697:CDS |
| TTCGTTTCTTGGAAAGGATA+GGG | 0.437828 | 1.1:-54891903 | None:intergenic |
| AATGATCAAGATGCAATTCC+TGG | 0.437834 | 1.1:-54892917 | None:intergenic |
| AGGACAGATATTTGATCCTT+CGG | 0.441893 | 1.1:+54891117 | MS.gene004697:CDS |
| TTGAAGATTCTCAAGTTGTT+GGG | 0.443017 | 1.1:+54890408 | MS.gene004697:CDS |
| AAAGATGTGACTGTTGCTAT+TGG | 0.443129 | 1.1:+54890371 | MS.gene004697:CDS |
| TGAAGCAACTTTGAAAACAT+TGG | 0.448948 | 1.1:+54890478 | MS.gene004697:CDS |
| CATAAGCTTCTCAGGTGAAA+AGG | 0.450721 | 1.1:-54891473 | None:intergenic |
| TCAGACAAAGAGAAGGAAGT+TGG | 0.451478 | 1.1:+54890620 | MS.gene004697:CDS |
| TTTGAAGATTCTCAAGTTGT+TGG | 0.451500 | 1.1:+54890407 | MS.gene004697:CDS |
| GATTCGACAAGAGCCAAGTT+TGG | 0.453596 | 1.1:+54891417 | MS.gene004697:CDS |
| GAATCTGGATTCCCATTGGC+TGG | 0.453644 | 1.1:-54891829 | None:intergenic |
| GGAGGAGTTGAAGGGTTTCA+GGG | 0.455076 | 1.1:+54890200 | MS.gene004697:CDS |
| TGAAGGTAAGAGTGAGAAGG+AGG | 0.456381 | 1.1:+54890244 | MS.gene004697:CDS |
| TTTGCGACGGGATTGGTTTG+TGG | 0.456670 | 1.1:-54891752 | None:intergenic |
| GAGTTGGATGGAGGGAAAGT+TGG | 0.456758 | 1.1:+54890575 | MS.gene004697:CDS |
| GATTTCTTTCCCAGGATCAC+TGG | 0.460398 | 1.1:-54892334 | None:intergenic |
| TCCAGAATATTTCAACATAG+AGG | 0.462499 | 1.1:-54892073 | None:intergenic |
| CTACGTGTATAAACATGAAC+AGG | 0.463107 | 1.1:-54892531 | None:intergenic |
| CAATAAGTGGCAATGTTACT+CGG | 0.463345 | 1.1:+54890549 | MS.gene004697:CDS |
| AATGGTGATCAAACTGGAAC+CGG | 0.464649 | 1.1:+54891718 | MS.gene004697:CDS |
| GTTTACGTTTGCGACGGGAT+TGG | 0.464670 | 1.1:-54891759 | None:intergenic |
| GAGTCAGATGAAGGGAAAGT+TGG | 0.469831 | 1.1:+54890734 | MS.gene004697:CDS |
| AGTTAATGACGCCGATGAAA+AGG | 0.470521 | 1.1:+54890811 | MS.gene004697:CDS |
| AAGTTCAAAACAAGTTCAGC+AGG | 0.470527 | 1.1:-54892636 | None:intergenic |
| AGCAAGAGTAACCCTTTAAC+CGG | 0.471478 | 1.1:-54891585 | None:intergenic |
| TCAGGAGATTCACCTATGGC+TGG | 0.473273 | 1.1:-54892390 | None:intergenic |
| CTCTGCTGCTTGCATTCTAC+CGG | 0.475415 | 1.1:+54891566 | MS.gene004697:CDS |
| ACTGAGAAGGACTTGGTAGT+TGG | 0.475703 | 1.1:+54890065 | MS.gene004697:CDS |
| GAGAATGAGGTAGTTGAGTT+GGG | 0.475736 | 1.1:+54890449 | MS.gene004697:CDS |
| ATTCAGGTTGAGTCAGATGA+AGG | 0.475737 | 1.1:+54890884 | MS.gene004697:CDS |
| AGAAGCCATCCATGGTGGCC+AGG | 0.480090 | 1.1:+54891097 | MS.gene004697:CDS |
| TTTGATGGTTTAGTTGAGGA+GGG | 0.480345 | 1.1:+54890347 | MS.gene004697:CDS |
| TGAGAAGATGGATGATTCAC+AGG | 0.480867 | 1.1:+54890763 | MS.gene004697:CDS |
| TTCAGGTTGTTGAAAACTGT+GGG | 0.482036 | 1.1:+54891395 | MS.gene004697:CDS |
| TAGTCTTTCGTTTCTTGGAA+AGG | 0.484292 | 1.1:-54891909 | None:intergenic |
| ACCTCTATAGGAGGAGGAGG+AGG | 0.484482 | 1.1:-54890017 | None:intergenic |
| TTCTCATCTATATAACCAGC+AGG | 0.485307 | 1.1:-54892609 | None:intergenic |
| GTTATTTAAGCTTGTTTCTG+AGG | 0.490022 | 1.1:-54892679 | None:intergenic |
| GAAATCTTACCTACAAAAGT+TGG | 0.497550 | 1.1:+54892351 | MS.gene004697:CDS |
| CCTCCTCCTATAGAGGTTGA+GGG | 0.499202 | 1.1:+54890023 | MS.gene004697:CDS |
| ATAAGAGAAATGTGACCTAA+AGG | 0.499413 | 1.1:-54891242 | None:intergenic |
| GGAACGTACGCGTGGAATGA+AGG | 0.499626 | 1.1:+54891205 | MS.gene004697:CDS |
| ATACACGTAGGTCCTGTTCC+AGG | 0.500440 | 1.1:+54892544 | MS.gene004697:CDS |
| ATTCGGGTTGAGTCAGATGA+AGG | 0.500442 | 1.1:+54890725 | MS.gene004697:CDS |
| ATCAGTACGCTGACGTCCCA+AGG | 0.502539 | 1.1:+54891938 | MS.gene004697:CDS |
| GATTCTGATTTGTGCATACA+AGG | 0.502676 | 1.1:+54890095 | MS.gene004697:CDS |
| CTCCTCAAAATTAGGGGAGA+AGG | 0.503090 | 1.1:-54892154 | None:intergenic |
| TCTCTGATGGCAGATGGTAA+TGG | 0.503504 | 1.1:+54892102 | MS.gene004697:CDS |
| GACCACATTAAGTTCAACAT+TGG | 0.504411 | 1.1:-54892940 | None:intergenic |
| AAGGAGGTAGTTGAGTTGGA+TGG | 0.505202 | 1.1:+54890260 | MS.gene004697:CDS |
| GATGTGGGTCTTACTATTGG+AGG | 0.505356 | 1.1:+54890182 | MS.gene004697:CDS |
| GCCGAAAGCAGCTTGCGCAT+CGG | 0.506845 | 1.1:-54892790 | None:intergenic |
| GTTACTCGGGTTGAGTTGGA+TGG | 0.512140 | 1.1:+54890563 | MS.gene004697:CDS |
| GAGTGCTGTAGATTCTGCTT+TGG | 0.512585 | 1.1:+54891297 | MS.gene004697:CDS |
| ATGTCCCCATGAAGAGTTCA+GGG | 0.518410 | 1.1:+54891020 | MS.gene004697:CDS |
| TTTGCTATCTTTACTTCAGT+GGG | 0.521231 | 1.1:+54892227 | MS.gene004697:CDS |
| TTGGTAGCATATTATGGGGA+TGG | 0.521750 | 1.1:+54891184 | MS.gene004697:CDS |
| TCTGTCCTGGCCACCATGGA+TGG | 0.523479 | 1.1:-54891102 | None:intergenic |
| TTTCGTTTCTTGGAAAGGAT+AGG | 0.527147 | 1.1:-54891904 | None:intergenic |
| CAATGTTACTCGGGTTGAGT+TGG | 0.528188 | 1.1:+54890559 | MS.gene004697:CDS |
| ATTTGCTATCTTTACTTCAG+TGG | 0.528385 | 1.1:+54892226 | MS.gene004697:CDS |
| GCAATGGCCTCATCATCATT+CGG | 0.528387 | 1.1:-54891868 | None:intergenic |
| AGGAAGCAAGCGGGCAAGAG+TGG | 0.530153 | 1.1:+54892752 | MS.gene004697:CDS |
| ATGAGGTAGTTGAGTTGGGT+GGG | 0.530499 | 1.1:+54890453 | MS.gene004697:CDS |
| TCAACTCTATGTACCAAACT+TGG | 0.533287 | 1.1:-54891430 | None:intergenic |
| GAACGTACGCGTGGAATGAA+GGG | 0.534286 | 1.1:+54891206 | MS.gene004697:CDS |
| TTATTTAAGCTTGTTTCTGA+GGG | 0.535145 | 1.1:-54892678 | None:intergenic |
| TTTACTTCAGTGGGTAGCAC+AGG | 0.536694 | 1.1:+54892236 | MS.gene004697:CDS |
| GGATGATTCACAGGAAGAGA+AGG | 0.537658 | 1.1:+54890772 | MS.gene004697:CDS |
| GAGTCAGATGAAGGGAAAGT+TGG | 0.538889 | 1.1:+54890893 | MS.gene004697:CDS |
| GTTGCTATTGGAGGAACTGT+AGG | 0.539624 | 1.1:+54890383 | MS.gene004697:CDS |
| CAAACGTAAACATAATCTAA+AGG | 0.540062 | 1.1:+54891771 | MS.gene004697:CDS |
| CTCGGGTTGAGTTGGATGGA+GGG | 0.541287 | 1.1:+54890567 | MS.gene004697:CDS |
| CGTAAACATAATCTAAAGGT+TGG | 0.541931 | 1.1:+54891775 | MS.gene004697:CDS |
| TGAGCAGAAGAAGAAGGAGG+AGG | 0.542045 | 1.1:+54890502 | MS.gene004697:CDS |
| GTAGGTAAGATTTCTTTCCC+AGG | 0.542544 | 1.1:-54892342 | None:intergenic |
| TGAGAAGGACTTGGTAGTTG+GGG | 0.543115 | 1.1:+54890067 | MS.gene004697:CDS |
| AATGAGGTAGTTGAGTTGGG+TGG | 0.543283 | 1.1:+54890452 | MS.gene004697:CDS |
| CACTCGGTGAGTAGTTAAGC+TGG | 0.544989 | 1.1:-54892857 | None:intergenic |
| TTGCTATTGGAGGAACTGTA+GGG | 0.545263 | 1.1:+54890384 | MS.gene004697:CDS |
| TCAGGGAAAAGTCGTAGAGA+AGG | 0.545278 | 1.1:+54891037 | MS.gene004697:CDS |
| GAAGGATCAAATATCTGTCC+TGG | 0.546699 | 1.1:-54891115 | None:intergenic |
| TCCTCAAAATTAGGGGAGAA+GGG | 0.547058 | 1.1:-54892153 | None:intergenic |
| TTGCATAAAGATGGTGTTTG+TGG | 0.549648 | 1.1:+54890296 | MS.gene004697:CDS |
| CCCTCAACCTCTATAGGAGG+AGG | 0.551375 | 1.1:-54890023 | None:intergenic |
| GAAAAGGTAAAAGCATCAGC+TGG | 0.551523 | 1.1:+54890827 | MS.gene004697:CDS |
| GGATGATACTGAGAAGGACT+TGG | 0.552752 | 1.1:+54890058 | MS.gene004697:CDS |
| GCTTGTTAGAACCAGCCAAT+GGG | 0.554154 | 1.1:+54891818 | MS.gene004697:CDS |
| TCTAGAGATGAAAACTCTGT+AGG | 0.554887 | 1.1:-54892201 | None:intergenic |
| TTCCAATGTTGAACTTAATG+TGG | 0.555710 | 1.1:+54892938 | MS.gene004697:CDS |
| GGGTTGCTAGCCAACTTACT+GGG | 0.555983 | 1.1:+54892046 | MS.gene004697:CDS |
| AAATTGGCGATTGTATCCGT+AGG | 0.556953 | 1.1:+54892025 | MS.gene004697:CDS |
| TCTGAGACAGAAATTGATAG+AGG | 0.558240 | 1.1:+54892732 | MS.gene004697:CDS |
| AGAAGGTAAGAGCGAGAATG+AGG | 0.560204 | 1.1:+54890436 | MS.gene004697:CDS |
| GAAGCAACGTTGCATAAAGA+TGG | 0.562111 | 1.1:+54890287 | MS.gene004697:CDS |
| TCGTTTCTTGGAAAGGATAG+GGG | 0.562588 | 1.1:-54891902 | None:intergenic |
| GTTGAGGTGAATAACGATGT+TGG | 0.562738 | 1.1:+54890323 | MS.gene004697:CDS |
| CCAGAATATTTCAACATAGA+GGG | 0.564536 | 1.1:-54892072 | None:intergenic |
| GAATGATCTGGTTTGGGGCA+AGG | 0.565852 | 1.1:+54891072 | MS.gene004697:CDS |
| GATGTGACTGTTGCTATTGG+AGG | 0.566838 | 1.1:+54890374 | MS.gene004697:CDS |
| AAGACGGGTCGAATTTGGGC+TGG | 0.567552 | 1.1:+54891330 | MS.gene004697:CDS |
| GCTGACGTCCCAAGGGTGAA+AGG | 0.569331 | 1.1:+54891946 | MS.gene004697:CDS |
| TTTCAGGAATTCAATCATTG+TGG | 0.569656 | 1.1:+54892311 | MS.gene004697:CDS |
| TAGAGGGCGACCCAGTAAGT+TGG | 0.571586 | 1.1:-54892056 | None:intergenic |
| ACTCGGGTTGAGTTGGATGG+AGG | 0.572931 | 1.1:+54890566 | MS.gene004697:CDS |
| GTGGGTAGCACAGGAACCAA+AGG | 0.573631 | 1.1:+54892245 | MS.gene004697:CDS |
| CTTCAGGTTGTTGAAAACTG+TGG | 0.573927 | 1.1:+54891394 | MS.gene004697:CDS |
| ATTGGATGAGCAGAAGAAGA+AGG | 0.575488 | 1.1:+54890496 | MS.gene004697:CDS |
| TGTTTCAGGAGATTCACCTA+TGG | 0.576258 | 1.1:-54892394 | None:intergenic |
| GAACAGGTAAAAGCATCAGA+TGG | 0.576894 | 1.1:+54890983 | MS.gene004697:CDS |
| TTCTGGAGACACTTCTCTGA+TGG | 0.577268 | 1.1:+54892089 | MS.gene004697:CDS |
| TCATTGTGGCCAGTGATCCT+GGG | 0.577427 | 1.1:+54892325 | MS.gene004697:CDS |
| GAACAGGCTAAAGCTTCAGA+TGG | 0.577631 | 1.1:+54890668 | MS.gene004697:CDS |
| AATTGGCGATTGTATCCGTA+GGG | 0.579455 | 1.1:+54892026 | MS.gene004697:CDS |
| ATTATGTTTACGTTTGCGAC+GGG | 0.582420 | 1.1:-54891764 | None:intergenic |
| TCAACCTCTATAGGAGGAGG+AGG | 0.585327 | 1.1:-54890020 | None:intergenic |
| AATCGATCAAAGCCTCCAGT+TGG | 0.585502 | 1.1:-54891523 | None:intergenic |
| TTGGAGAAAGAAGCAATAAG+TGG | 0.587664 | 1.1:+54890536 | MS.gene004697:CDS |
| TCCTTCGGATGCATCTGCGC+AGG | 0.588537 | 1.1:+54891132 | MS.gene004697:CDS |
| TTACTATTGGAGGAGTTGAA+GGG | 0.588873 | 1.1:+54890192 | MS.gene004697:CDS |
| CTTTGGATGAAGTCAAAAGA+CGG | 0.588987 | 1.1:+54891314 | MS.gene004697:CDS |
| TGATGATTCAGACAAAGAGA+AGG | 0.590026 | 1.1:+54890613 | MS.gene004697:CDS |
| AGCTTGTTAGAACCAGCCAA+TGG | 0.592127 | 1.1:+54891817 | MS.gene004697:CDS |
| GATCCCTCAACCTCTATAGG+AGG | 0.592821 | 1.1:-54890026 | None:intergenic |
| GATTGATTCAGACAAAGAGA+AGG | 0.593485 | 1.1:+54890928 | MS.gene004697:CDS |
| CCCGAATTACAATATTGTGG+AGG | 0.595704 | 1.1:+54891610 | MS.gene004697:CDS |
| CAGGGAAAAGTCGTAGAGAA+GGG | 0.596276 | 1.1:+54891038 | MS.gene004697:CDS |
| TGCTGAGCTGAATCATGATG+TGG | 0.597423 | 1.1:+54890130 | MS.gene004697:CDS |
| TGGTGTTTGTGGTAGTGTTG+AGG | 0.598048 | 1.1:+54890307 | MS.gene004697:CDS |
| TTTGGATGAAGTCAAAAGAC+GGG | 0.598056 | 1.1:+54891315 | MS.gene004697:CDS |
| GGTAGAATCTGGATTCCCAT+TGG | 0.599521 | 1.1:-54891833 | None:intergenic |
| GACACTTCTCTGATGGCAGA+TGG | 0.600480 | 1.1:+54892096 | MS.gene004697:CDS |
| TGGGTAGCACAGGAACCAAA+GGG | 0.603458 | 1.1:+54892246 | MS.gene004697:CDS |
| GGTTAGGGATGATACTGAGA+AGG | 0.604612 | 1.1:+54890052 | MS.gene004697:CDS |
| AATAAGTGGCAATGTTACTC+GGG | 0.609181 | 1.1:+54890550 | MS.gene004697:CDS |
| AGTTCAAGAGGATAAAGATG+TGG | 0.609994 | 1.1:+54890166 | MS.gene004697:CDS |
| CTATTTGGTAGCATATTATG+GGG | 0.612060 | 1.1:+54891180 | MS.gene004697:CDS |
| AATTGATAGAGGAAGCAAGC+GGG | 0.613209 | 1.1:+54892743 | MS.gene004697:CDS |
| ATCATTCGGATAATCACTGT+GGG | 0.613540 | 1.1:-54891854 | None:intergenic |
| GCAAGGTGAGAAGCCATCCA+TGG | 0.614983 | 1.1:+54891089 | MS.gene004697:CDS |
| GTTCAAGAGGATAAAGATGT+GGG | 0.615110 | 1.1:+54890167 | MS.gene004697:CDS |
| TTGCCCGAATTACAATATTG+TGG | 0.615408 | 1.1:+54891607 | MS.gene004697:CDS |
| GACACATGTTGCATGCAGAA+TGG | 0.617411 | 1.1:+54892438 | MS.gene004697:CDS |
| GCCTGCGCAGATGCATCCGA+AGG | 0.622190 | 1.1:-54891133 | None:intergenic |
| ATAAGTATCTTTAGGTACGC+AGG | 0.622403 | 1.1:-54891359 | None:intergenic |
| GATTATGTTTACGTTTGCGA+CGG | 0.623586 | 1.1:-54891765 | None:intergenic |
| AAAAGGAAGAAACCAGCCAT+AGG | 0.628089 | 1.1:+54892378 | MS.gene004697:CDS |
| AAGCTTCTCAGGTGAAAAGG+AGG | 0.628731 | 1.1:-54891470 | None:intergenic |
| TTCAGGTTGAGTCAGATGAA+GGG | 0.631536 | 1.1:+54890885 | MS.gene004697:CDS |
| TAAGTTGGCTAGCAACCCTA+CGG | 0.637189 | 1.1:-54892041 | None:intergenic |
| GTTCAAAACAAGTTCAGCAG+GGG | 0.637786 | 1.1:-54892634 | None:intergenic |
| TCAGTACGCTGACGTCCCAA+GGG | 0.638239 | 1.1:+54891939 | MS.gene004697:CDS |
| TTCGGGTTGAGTCAGATGAA+GGG | 0.639871 | 1.1:+54890726 | MS.gene004697:CDS |
| TCTGTGAATGATCTGGTTTG+GGG | 0.640253 | 1.1:+54891067 | MS.gene004697:CDS |
| CTGAGTCTCCTCAAAATTAG+GGG | 0.644036 | 1.1:-54892160 | None:intergenic |
| AATATCTGTCCTGGCCACCA+TGG | 0.644606 | 1.1:-54891106 | None:intergenic |
| ATTGGAGCTTACAACAGCGA+AGG | 0.645925 | 1.1:+54891543 | MS.gene004697:CDS |
| TGATTATCCGAATGATGATG+AGG | 0.647957 | 1.1:+54891861 | MS.gene004697:CDS |
| AGTTCAAAACAAGTTCAGCA+GGG | 0.652707 | 1.1:-54892635 | None:intergenic |
| GAAGCTTTCAACAATGCACT+CGG | 0.655548 | 1.1:-54892873 | None:intergenic |
| ATGGGGATGGAACGTACGCG+TGG | 0.660026 | 1.1:+54891197 | MS.gene004697:CDS |
| CATCATTCGGATAATCACTG+TGG | 0.677313 | 1.1:-54891855 | None:intergenic |
| AAGCAGAATCTACAGCACTC+CGG | 0.679557 | 1.1:-54891294 | None:intergenic |
| GGATGAGCAGAAGAAGAAGG+AGG | 0.687283 | 1.1:+54890499 | MS.gene004697:CDS |
| AGGTGAGAAGCCATCCATGG+TGG | 0.691278 | 1.1:+54891092 | MS.gene004697:CDS |
| GTTGAGAAAGAAGTGATGAG+TGG | 0.695209 | 1.1:+54890695 | MS.gene004697:CDS |
| GCTGAGCTGAATCATGATGT+GGG | 0.707525 | 1.1:+54890131 | MS.gene004697:CDS |
| CTGTTCATGTTTATACACGT+AGG | 0.716902 | 1.1:+54892532 | MS.gene004697:CDS |
| AAATTGATAGAGGAAGCAAG+CGG | 0.720495 | 1.1:+54892742 | MS.gene004697:CDS |
| ATGCAATTCCTGGTCCTGTG+TGG | 0.729902 | 1.1:-54892907 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTTATCAGTATCATTAATTA+AGG | - | chr1.1:54891656-54891675 | None:intergenic | 15.0% |
| !!! | AATAACATTTTTAAGCATTT+TGG | + | chr1.1:54892696-54892715 | MS.gene004697:CDS | 15.0% |
| !!! | AATTTTAAATGATTGTTTTG+TGG | - | chr1.1:54892010-54892029 | None:intergenic | 15.0% |
| !!! | ACAAAACAATCATTTAAAAT+TGG | + | chr1.1:54892009-54892028 | MS.gene004697:CDS | 15.0% |
| !! | ACAATTCATACAAGTAAAAA+TGG | + | chr1.1:54891700-54891719 | MS.gene004697:CDS | 20.0% |
| !! | ATAGTTTCTTGAATGTTATA+GGG | + | chr1.1:54892274-54892293 | MS.gene004697:CDS | 20.0% |
| !! | TATAGTTTCTTGAATGTTAT+AGG | + | chr1.1:54892273-54892292 | MS.gene004697:CDS | 20.0% |
| !! | TATTGAAAAGCAGAAAAATT+TGG | + | chr1.1:54891264-54891283 | MS.gene004697:CDS | 20.0% |
| ! | ATCTTGTCATAAGTATCTTT+AGG | - | chr1.1:54891370-54891389 | None:intergenic | 25.0% |
| ! | CAAACGTAAACATAATCTAA+AGG | + | chr1.1:54891771-54891790 | MS.gene004697:CDS | 25.0% |
| ! | TTATGACAAGATTAAACTTC+AGG | + | chr1.1:54891378-54891397 | MS.gene004697:CDS | 25.0% |
| !!! | TTATTTAAGCTTGTTTCTGA+GGG | - | chr1.1:54892681-54892700 | None:intergenic | 25.0% |
| !!! | TTTTAGAAAGAACTGCTATT+TGG | + | chr1.1:54891165-54891184 | MS.gene004697:CDS | 25.0% |
| AAGAAACTATAATCTCCCTT+TGG | - | chr1.1:54892264-54892283 | None:intergenic | 30.0% | |
| ACCTCCACAATATTGTAATT+CGG | - | chr1.1:54891614-54891633 | None:intergenic | 30.0% | |
| AGTAAAAATGGTGATCAAAC+TGG | + | chr1.1:54891712-54891731 | MS.gene004697:CDS | 30.0% | |
| ATAAGAGAAATGTGACCTAA+AGG | - | chr1.1:54891245-54891264 | None:intergenic | 30.0% | |
| ATTACAATATTGTGGAGGTT+TGG | + | chr1.1:54891615-54891634 | MS.gene004697:CDS | 30.0% | |
| CCAGAATATTTCAACATAGA+GGG | - | chr1.1:54892075-54892094 | None:intergenic | 30.0% | |
| CGTAAACATAATCTAAAGGT+TGG | + | chr1.1:54891775-54891794 | MS.gene004697:CDS | 30.0% | |
| GAAATCTTACCTACAAAAGT+TGG | + | chr1.1:54892351-54892370 | MS.gene004697:CDS | 30.0% | |
| GCTAAACAGTTCAACATATT+TGG | + | chr1.1:54892816-54892835 | MS.gene004697:CDS | 30.0% | |
| TCATCAAAGTCAAATGTTTC+AGG | - | chr1.1:54892411-54892430 | None:intergenic | 30.0% | |
| TCCAGAATATTTCAACATAG+AGG | - | chr1.1:54892076-54892095 | None:intergenic | 30.0% | |
| TTCCAATGTTGAACTTAATG+TGG | + | chr1.1:54892938-54892957 | MS.gene004697:CDS | 30.0% | |
| TTTCAGGAATTCAATCATTG+TGG | + | chr1.1:54892311-54892330 | MS.gene004697:CDS | 30.0% | |
| ! | AACATTTGACTTTGATGATC+TGG | + | chr1.1:54892413-54892432 | MS.gene004697:CDS | 30.0% |
| ! | CTATTTGGTAGCATATTATG+GGG | + | chr1.1:54891180-54891199 | MS.gene004697:CDS | 30.0% |
| ! | GCTATTTGGTAGCATATTAT+GGG | + | chr1.1:54891179-54891198 | MS.gene004697:CDS | 30.0% |
| ! | TAAACATGAACAGGTTTTTC+TGG | - | chr1.1:54892525-54892544 | None:intergenic | 30.0% |
| ! | TAAGCATTTTGGACCTTTAA+AGG | + | chr1.1:54892707-54892726 | MS.gene004697:CDS | 30.0% |
| ! | TGAAGCAACTTTGAAAACAT+TGG | + | chr1.1:54890478-54890497 | MS.gene004697:CDS | 30.0% |
| ! | TGATGCTTTTACCTTTTCAT+CGG | - | chr1.1:54890825-54890844 | None:intergenic | 30.0% |
| ! | TGCTATTTGGTAGCATATTA+TGG | + | chr1.1:54891178-54891197 | MS.gene004697:CDS | 30.0% |
| ! | TTGAAGATTCTCAAGTTGTT+GGG | + | chr1.1:54890408-54890427 | MS.gene004697:CDS | 30.0% |
| ! | TTTGAAGATTCTCAAGTTGT+TGG | + | chr1.1:54890407-54890426 | MS.gene004697:CDS | 30.0% |
| ! | TTTGCTATCTTTACTTCAGT+GGG | + | chr1.1:54892227-54892246 | MS.gene004697:CDS | 30.0% |
| !! | AGAAAAATTTGGAAGTGTTC+CGG | + | chr1.1:54891275-54891294 | MS.gene004697:CDS | 30.0% |
| !! | ATTTGCTATCTTTACTTCAG+TGG | + | chr1.1:54892226-54892245 | MS.gene004697:CDS | 30.0% |
| !! | GTTATTTAAGCTTGTTTCTG+AGG | - | chr1.1:54892682-54892701 | None:intergenic | 30.0% |
| !!! | AATAACGATGTTGGTTTTGA+TGG | + | chr1.1:54890332-54890351 | MS.gene004697:CDS | 30.0% |
| AAAATACTGTTTCCTGGAAC+AGG | - | chr1.1:54892559-54892578 | None:intergenic | 35.0% | |
| AAAGATGTGACTGTTGCTAT+TGG | + | chr1.1:54890371-54890390 | MS.gene004697:CDS | 35.0% | |
| AAAGATGTGGGTCTTACTAT+TGG | + | chr1.1:54890179-54890198 | MS.gene004697:CDS | 35.0% | |
| AAATTGATAGAGGAAGCAAG+CGG | + | chr1.1:54892742-54892761 | MS.gene004697:CDS | 35.0% | |
| AAGTATTCCATAAGCTTCTC+AGG | - | chr1.1:54891484-54891503 | None:intergenic | 35.0% | |
| AAGTTCAAAACAAGTTCAGC+AGG | - | chr1.1:54892639-54892658 | None:intergenic | 35.0% | |
| AATAAGTGGCAATGTTACTC+GGG | + | chr1.1:54890550-54890569 | MS.gene004697:CDS | 35.0% | |
| AATGATCAAGATGCAATTCC+TGG | - | chr1.1:54892920-54892939 | None:intergenic | 35.0% | |
| AGCAATAGTCTTTCGTTTCT+TGG | - | chr1.1:54891917-54891936 | None:intergenic | 35.0% | |
| AGGACAGATATTTGATCCTT+CGG | + | chr1.1:54891117-54891136 | MS.gene004697:CDS | 35.0% | |
| AGGGGAAAAAAGATTAGCAA+TGG | - | chr1.1:54891887-54891906 | None:intergenic | 35.0% | |
| AGTTCAAAACAAGTTCAGCA+GGG | - | chr1.1:54892638-54892657 | None:intergenic | 35.0% | |
| AGTTCAAGAGGATAAAGATG+TGG | + | chr1.1:54890166-54890185 | MS.gene004697:CDS | 35.0% | |
| ATAAGTATCTTTAGGTACGC+AGG | - | chr1.1:54891362-54891381 | None:intergenic | 35.0% | |
| ATCATTCGGATAATCACTGT+GGG | - | chr1.1:54891857-54891876 | None:intergenic | 35.0% | |
| ATTATGTTTACGTTTGCGAC+GGG | - | chr1.1:54891767-54891786 | None:intergenic | 35.0% | |
| ATTTAATGATGCCGAAGAAC+AGG | + | chr1.1:54890967-54890986 | MS.gene004697:CDS | 35.0% | |
| CAATAAGTGGCAATGTTACT+CGG | + | chr1.1:54890549-54890568 | MS.gene004697:CDS | 35.0% | |
| CCCTCTATGTTGAAATATTC+TGG | + | chr1.1:54892072-54892091 | MS.gene004697:CDS | 35.0% | |
| CCTCCACAATATTGTAATTC+GGG | - | chr1.1:54891613-54891632 | None:intergenic | 35.0% | |
| CTACAAAAGTTGGCACTAAA+AGG | + | chr1.1:54892361-54892380 | MS.gene004697:CDS | 35.0% | |
| CTACGTGTATAAACATGAAC+AGG | - | chr1.1:54892534-54892553 | None:intergenic | 35.0% | |
| CTGTTCATGTTTATACACGT+AGG | + | chr1.1:54892532-54892551 | MS.gene004697:CDS | 35.0% | |
| CTTTGGATGAAGTCAAAAGA+CGG | + | chr1.1:54891314-54891333 | MS.gene004697:CDS | 35.0% | |
| GACCACATTAAGTTCAACAT+TGG | - | chr1.1:54892943-54892962 | None:intergenic | 35.0% | |
| GATTATGTTTACGTTTGCGA+CGG | - | chr1.1:54891768-54891787 | None:intergenic | 35.0% | |
| GGAGACAAAGAAGTTATTGA+TGG | + | chr1.1:54890641-54890660 | MS.gene004697:CDS | 35.0% | |
| GTTCAAGAGGATAAAGATGT+GGG | + | chr1.1:54890167-54890186 | MS.gene004697:CDS | 35.0% | |
| TAGTCTTTCGTTTCTTGGAA+AGG | - | chr1.1:54891912-54891931 | None:intergenic | 35.0% | |
| TCAACTCTATGTACCAAACT+TGG | - | chr1.1:54891433-54891452 | None:intergenic | 35.0% | |
| TCAGACAAAGAGAAGGAAAT+TGG | + | chr1.1:54890935-54890954 | MS.gene004697:CDS | 35.0% | |
| TCTAGAGATGAAAACTCTGT+AGG | - | chr1.1:54892204-54892223 | None:intergenic | 35.0% | |
| TCTGAGTCTCCTCAAAATTA+GGG | - | chr1.1:54892164-54892183 | None:intergenic | 35.0% | |
| TCTGTCTCAGATTCCTTTAA+AGG | - | chr1.1:54892723-54892742 | None:intergenic | 35.0% | |
| TGATGATTCAGACAAAGAGA+AGG | + | chr1.1:54890613-54890632 | MS.gene004697:CDS | 35.0% | |
| TTACTATTGGAGGAGTTGAA+GGG | + | chr1.1:54890192-54890211 | MS.gene004697:CDS | 35.0% | |
| TTCGTTTCTTGGAAAGGATA+GGG | - | chr1.1:54891906-54891925 | None:intergenic | 35.0% | |
| TTCTCATCTATATAACCAGC+AGG | - | chr1.1:54892612-54892631 | None:intergenic | 35.0% | |
| TTCTGAGTCTCCTCAAAATT+AGG | - | chr1.1:54892165-54892184 | None:intergenic | 35.0% | |
| TTGCATAAAGATGGTGTTTG+TGG | + | chr1.1:54890296-54890315 | MS.gene004697:CDS | 35.0% | |
| TTGCCCGAATTACAATATTG+TGG | + | chr1.1:54891607-54891626 | MS.gene004697:CDS | 35.0% | |
| TTGGAGAAAGAAGCAATAAG+TGG | + | chr1.1:54890536-54890555 | MS.gene004697:CDS | 35.0% | |
| TTTCGTTTCTTGGAAAGGAT+AGG | - | chr1.1:54891907-54891926 | None:intergenic | 35.0% | |
| TTTCTGTGAATGATCTGGTT+TGG | + | chr1.1:54891065-54891084 | MS.gene004697:CDS | 35.0% | |
| TTTGGATGAAGTCAAAAGAC+GGG | + | chr1.1:54891315-54891334 | MS.gene004697:CDS | 35.0% | |
| ! | AGTTGGTATTTCTGAGAAGA+TGG | + | chr1.1:54890751-54890770 | MS.gene004697:CDS | 35.0% |
| ! | ATATAACCAGCAGGTTTTTC+AGG | - | chr1.1:54892603-54892622 | None:intergenic | 35.0% |
| ! | CTTTTAGTGCCAACTTTTGT+AGG | - | chr1.1:54892363-54892382 | None:intergenic | 35.0% |
| ! | GAAGTTTTCTGTGAATGATC+TGG | + | chr1.1:54891060-54891079 | MS.gene004697:CDS | 35.0% |
| ! | GATGAGTGATGATGTTATTC+AGG | + | chr1.1:54890868-54890887 | MS.gene004697:CDS | 35.0% |
| ! | GATTCTGATTTGTGCATACA+AGG | + | chr1.1:54890095-54890114 | MS.gene004697:CDS | 35.0% |
| ! | GATTGATTCAGACAAAGAGA+AGG | + | chr1.1:54890928-54890947 | MS.gene004697:CDS | 35.0% |
| ! | GCTTTATCCAATTTTCCAAC+TGG | + | chr1.1:54891508-54891527 | MS.gene004697:CDS | 35.0% |
| ! | TCTGAGACAGAAATTGATAG+AGG | + | chr1.1:54892732-54892751 | MS.gene004697:CDS | 35.0% |
| ! | TGATGAGTGGTGATGTTATT+CGG | + | chr1.1:54890708-54890727 | MS.gene004697:CDS | 35.0% |
| ! | TGATGCTTTTACCTGTTCTT+CGG | - | chr1.1:54890981-54891000 | None:intergenic | 35.0% |
| ! | TGATTATCCGAATGATGATG+AGG | + | chr1.1:54891861-54891880 | MS.gene004697:CDS | 35.0% |
| ! | TGTTCCAGGAAACAGTATTT+TGG | + | chr1.1:54892558-54892577 | MS.gene004697:CDS | 35.0% |
| ! | TTATCCAATTTTCCAACTGG+AGG | + | chr1.1:54891511-54891530 | MS.gene004697:CDS | 35.0% |
| ! | TTCTGTGAATGATCTGGTTT+GGG | + | chr1.1:54891066-54891085 | MS.gene004697:CDS | 35.0% |
| ! | TTTGATGGTTTAGTTGAGGA+GGG | + | chr1.1:54890347-54890366 | MS.gene004697:CDS | 35.0% |
| !! | AATCATGATGTGGGTTTTGA+TGG | + | chr1.1:54890140-54890159 | MS.gene004697:CDS | 35.0% |
| !! | ATCATGATGTGGGTTTTGAT+GGG | + | chr1.1:54890141-54890160 | MS.gene004697:CDS | 35.0% |
| !! | TGTTTTGAACTTTGCTGACT+TGG | + | chr1.1:54892647-54892666 | MS.gene004697:CDS | 35.0% |
| !! | TTCAGGTTGTTGAAAACTGT+GGG | + | chr1.1:54891395-54891414 | MS.gene004697:CDS | 35.0% |
| !! | TTTTGAAGGTAAGAGTGAGA+AGG | + | chr1.1:54890241-54890260 | MS.gene004697:CDS | 35.0% |
| !! | TTTTGATGGTTTAGTTGAGG+AGG | + | chr1.1:54890346-54890365 | MS.gene004697:CDS | 35.0% |
| !!! | TGGTTTTGATGGTTTAGTTG+AGG | + | chr1.1:54890343-54890362 | MS.gene004697:CDS | 35.0% |
| AAAAGGAAGAAACCAGCCAT+AGG | + | chr1.1:54892378-54892397 | MS.gene004697:CDS | 40.0% | |
| AAAGCCTCCAGTTGGAAAAT+TGG | - | chr1.1:54891518-54891537 | None:intergenic | 40.0% | |
| AAATTGGCGATTGTATCCGT+AGG | + | chr1.1:54892025-54892044 | MS.gene004697:CDS | 40.0% | |
| AATGGTGATCAAACTGGAAC+CGG | + | chr1.1:54891718-54891737 | MS.gene004697:CDS | 40.0% | |
| AATTGATAGAGGAAGCAAGC+GGG | + | chr1.1:54892743-54892762 | MS.gene004697:CDS | 40.0% | |
| AATTGGCGATTGTATCCGTA+GGG | + | chr1.1:54892026-54892045 | MS.gene004697:CDS | 40.0% | |
| AGCAAGAGTAACCCTTTAAC+CGG | - | chr1.1:54891588-54891607 | None:intergenic | 40.0% | |
| AGTTAATGACGCCGATGAAA+AGG | + | chr1.1:54890811-54890830 | MS.gene004697:CDS | 40.0% | |
| ATAGATCCCTCAACCTCTAT+AGG | - | chr1.1:54890032-54890051 | None:intergenic | 40.0% | |
| ATTGGATGAGCAGAAGAAGA+AGG | + | chr1.1:54890496-54890515 | MS.gene004697:CDS | 40.0% | |
| CAAGTTGTTGGGTCATTAGA+AGG | + | chr1.1:54890419-54890438 | MS.gene004697:CDS | 40.0% | |
| CATAAGCTTCTCAGGTGAAA+AGG | - | chr1.1:54891476-54891495 | None:intergenic | 40.0% | |
| CATCATTCGGATAATCACTG+TGG | - | chr1.1:54891858-54891877 | None:intergenic | 40.0% | |
| CCCGAATTACAATATTGTGG+AGG | + | chr1.1:54891610-54891629 | MS.gene004697:CDS | 40.0% | |
| CTGAGTCTCCTCAAAATTAG+GGG | - | chr1.1:54892163-54892182 | None:intergenic | 40.0% | |
| CTTACTATTGGAGGAGTTGA+AGG | + | chr1.1:54890191-54890210 | MS.gene004697:CDS | 40.0% | |
| GAAGCAACGTTGCATAAAGA+TGG | + | chr1.1:54890287-54890306 | MS.gene004697:CDS | 40.0% | |
| GAAGCTTTCAACAATGCACT+CGG | - | chr1.1:54892876-54892895 | None:intergenic | 40.0% | |
| GAAGGATCAAATATCTGTCC+TGG | - | chr1.1:54891118-54891137 | None:intergenic | 40.0% | |
| GAGAATGAGGTAGTTGAGTT+GGG | + | chr1.1:54890449-54890468 | MS.gene004697:CDS | 40.0% | |
| GCTACCAAAATACTGTTTCC+TGG | - | chr1.1:54892565-54892584 | None:intergenic | 40.0% | |
| GGAGGAGGTAGATGAAATAT+TGG | + | chr1.1:54890517-54890536 | MS.gene004697:CDS | 40.0% | |
| GGAGTTTCTTCTCTGATTTC+AGG | + | chr1.1:54892295-54892314 | MS.gene004697:CDS | 40.0% | |
| GTAGGTAAGATTTCTTTCCC+AGG | - | chr1.1:54892345-54892364 | None:intergenic | 40.0% | |
| GTTCAAAACAAGTTCAGCAG+GGG | - | chr1.1:54892637-54892656 | None:intergenic | 40.0% | |
| GTTGAGAAAGAAGTGATGAG+TGG | + | chr1.1:54890695-54890714 | MS.gene004697:CDS | 40.0% | |
| GTTGAGGTGAATAACGATGT+TGG | + | chr1.1:54890323-54890342 | MS.gene004697:CDS | 40.0% | |
| TAATCACTGTGGGTAGAATC+TGG | - | chr1.1:54891847-54891866 | None:intergenic | 40.0% | |
| TATAGAGGTTGAGGGATCTA+TGG | + | chr1.1:54890031-54890050 | MS.gene004697:CDS | 40.0% | |
| TCAAAAGACGGGTCGAATTT+GGG | + | chr1.1:54891326-54891345 | MS.gene004697:CDS | 40.0% | |
| TCACAGGAAGAGAAGGAAAT+TGG | + | chr1.1:54890779-54890798 | MS.gene004697:CDS | 40.0% | |
| TCAGACAAAGAGAAGGAAGT+TGG | + | chr1.1:54890620-54890639 | MS.gene004697:CDS | 40.0% | |
| TCCTCAAAATTAGGGGAGAA+GGG | - | chr1.1:54892156-54892175 | None:intergenic | 40.0% | |
| TCGTTTCTTGGAAAGGATAG+GGG | - | chr1.1:54891905-54891924 | None:intergenic | 40.0% | |
| TGAGAAGATGGATGATTCAC+AGG | + | chr1.1:54890763-54890782 | MS.gene004697:CDS | 40.0% | |
| TGTTTCAGGAGATTCACCTA+TGG | - | chr1.1:54892397-54892416 | None:intergenic | 40.0% | |
| ! | ACTTTTCCCTGAACTCTTCA+TGG | - | chr1.1:54891029-54891048 | None:intergenic | 40.0% |
| ! | CTTGCATTCTACCGGTTAAA+GGG | + | chr1.1:54891574-54891593 | MS.gene004697:CDS | 40.0% |
| ! | CTTTTCACCTGAGAAGCTTA+TGG | + | chr1.1:54891474-54891493 | MS.gene004697:CDS | 40.0% |
| ! | CTTTTCCCTGAACTCTTCAT+GGG | - | chr1.1:54891028-54891047 | None:intergenic | 40.0% |
| ! | GATGAGTGGTGATGTTATTC+GGG | + | chr1.1:54890709-54890728 | MS.gene004697:CDS | 40.0% |
| ! | GGTGCTTGAACTTTTCTCAA+GGG | - | chr1.1:54891989-54892008 | None:intergenic | 40.0% |
| ! | GTTTGTGGCTTTTGAATCTC+CGG | - | chr1.1:54891740-54891759 | None:intergenic | 40.0% |
| ! | TCTGTGAATGATCTGGTTTG+GGG | + | chr1.1:54891067-54891086 | MS.gene004697:CDS | 40.0% |
| ! | TGGTGCTTGAACTTTTCTCA+AGG | - | chr1.1:54891990-54892009 | None:intergenic | 40.0% |
| ! | TTCATCTTTTGCTACCACAC+AGG | + | chr1.1:54892893-54892912 | MS.gene004697:CDS | 40.0% |
| ! | TTGCTATTGGAGGAACTGTA+GGG | + | chr1.1:54890384-54890403 | MS.gene004697:CDS | 40.0% |
| ! | TTGGTAGCATATTATGGGGA+TGG | + | chr1.1:54891184-54891203 | MS.gene004697:CDS | 40.0% |
| ! | TTTTCCCTGAACTCTTCATG+GGG | - | chr1.1:54891027-54891046 | None:intergenic | 40.0% |
| !! | AGTTATTGATGGCGAAGAAC+AGG | + | chr1.1:54890652-54890671 | MS.gene004697:CDS | 40.0% |
| !! | ATTCAGGTTGAGTCAGATGA+AGG | + | chr1.1:54890884-54890903 | MS.gene004697:CDS | 40.0% |
| !! | CTTCAGGTTGTTGAAAACTG+TGG | + | chr1.1:54891394-54891413 | MS.gene004697:CDS | 40.0% |
| !! | GAAAAGGTAAAAGCATCAGC+TGG | + | chr1.1:54890827-54890846 | MS.gene004697:CDS | 40.0% |
| !! | GAACAGGTAAAAGCATCAGA+TGG | + | chr1.1:54890983-54891002 | MS.gene004697:CDS | 40.0% |
| !! | TTCAGGTTGAGTCAGATGAA+GGG | + | chr1.1:54890885-54890904 | MS.gene004697:CDS | 40.0% |
| !! | TTTTGATGGGTCAGTTCAAG+AGG | + | chr1.1:54890154-54890173 | MS.gene004697:CDS | 40.0% |
| AAGCAGAATCTACAGCACTC+CGG | - | chr1.1:54891297-54891316 | None:intergenic | 45.0% | |
| AAGCTTCTCAGGTGAAAAGG+AGG | - | chr1.1:54891473-54891492 | None:intergenic | 45.0% | |
| AATCGATCAAAGCCTCCAGT+TGG | - | chr1.1:54891526-54891545 | None:intergenic | 45.0% | |
| AGAAGGTAAGAGCGAGAATG+AGG | + | chr1.1:54890436-54890455 | MS.gene004697:CDS | 45.0% | |
| AGGTTGAGGGATCTATGGTT+AGG | + | chr1.1:54890036-54890055 | MS.gene004697:CDS | 45.0% | |
| ATGTCCCCATGAAGAGTTCA+GGG | + | chr1.1:54891020-54891039 | MS.gene004697:CDS | 45.0% | |
| ATTGGAGCTTACAACAGCGA+AGG | + | chr1.1:54891543-54891562 | MS.gene004697:CDS | 45.0% | |
| CAGGGAAAAGTCGTAGAGAA+GGG | + | chr1.1:54891038-54891057 | MS.gene004697:CDS | 45.0% | |
| CGAGAATGAGGTAGTTGAGT+TGG | + | chr1.1:54890448-54890467 | MS.gene004697:CDS | 45.0% | |
| CTCCTCAAAATTAGGGGAGA+AGG | - | chr1.1:54892157-54892176 | None:intergenic | 45.0% | |
| GAACAGGCTAAAGCTTCAGA+TGG | + | chr1.1:54890668-54890687 | MS.gene004697:CDS | 45.0% | |
| GACACATGTTGCATGCAGAA+TGG | + | chr1.1:54892438-54892457 | MS.gene004697:CDS | 45.0% | |
| GAGTCAGATGAAGGGAAAGT+TGG | + | chr1.1:54890734-54890753 | MS.gene004697:CDS | 45.0% | |
| GATGTGGGTCTTACTATTGG+AGG | + | chr1.1:54890182-54890201 | MS.gene004697:CDS | 45.0% | |
| GATTCGACAAGAGCCAAGTT+TGG | + | chr1.1:54891417-54891436 | MS.gene004697:CDS | 45.0% | |
| GATTTCTTTCCCAGGATCAC+TGG | - | chr1.1:54892337-54892356 | None:intergenic | 45.0% | |
| GCAATGGCCTCATCATCATT+CGG | - | chr1.1:54891871-54891890 | None:intergenic | 45.0% | |
| GCTGAGCTGAATCATGATGT+GGG | + | chr1.1:54890131-54890150 | MS.gene004697:CDS | 45.0% | |
| GGATGATACTGAGAAGGACT+TGG | + | chr1.1:54890058-54890077 | MS.gene004697:CDS | 45.0% | |
| GGATGATTCACAGGAAGAGA+AGG | + | chr1.1:54890772-54890791 | MS.gene004697:CDS | 45.0% | |
| GGTAGAATCTGGATTCCCAT+TGG | - | chr1.1:54891836-54891855 | None:intergenic | 45.0% | |
| GGTCTAAGCTGAAGTCCTTT+AGG | + | chr1.1:54891227-54891246 | MS.gene004697:CDS | 45.0% | |
| GGTTAGGGATGATACTGAGA+AGG | + | chr1.1:54890052-54890071 | MS.gene004697:CDS | 45.0% | |
| GGTTGAGGGATCTATGGTTA+GGG | + | chr1.1:54890037-54890056 | MS.gene004697:CDS | 45.0% | |
| GTCAAAAGACGGGTCGAATT+TGG | + | chr1.1:54891325-54891344 | MS.gene004697:CDS | 45.0% | |
| TCAGGGAAAAGTCGTAGAGA+AGG | + | chr1.1:54891037-54891056 | MS.gene004697:CDS | 45.0% | |
| TCTCTGATGGCAGATGGTAA+TGG | + | chr1.1:54892102-54892121 | MS.gene004697:CDS | 45.0% | |
| TGAAGGTAAGAGTGAGAAGG+AGG | + | chr1.1:54890244-54890263 | MS.gene004697:CDS | 45.0% | |
| TGAGAAGGAGGTAGTTGAGT+TGG | + | chr1.1:54890256-54890275 | MS.gene004697:CDS | 45.0% | |
| TGCTGAGCTGAATCATGATG+TGG | + | chr1.1:54890130-54890149 | MS.gene004697:CDS | 45.0% | |
| TTCAGGGTTCTCAAGCTGTT+GGG | + | chr1.1:54890216-54890235 | MS.gene004697:CDS | 45.0% | |
| TTCTTCTGCCTTTCACCCTT+GGG | - | chr1.1:54891957-54891976 | None:intergenic | 45.0% | |
| TTTACTTCAGTGGGTAGCAC+AGG | + | chr1.1:54892236-54892255 | MS.gene004697:CDS | 45.0% | |
| TTTCAGGGTTCTCAAGCTGT+TGG | + | chr1.1:54890215-54890234 | MS.gene004697:CDS | 45.0% | |
| TTTCTTCTGCCTTTCACCCT+TGG | - | chr1.1:54891958-54891977 | None:intergenic | 45.0% | |
| ! | AACTGGAGGCTTTGATCGAT+TGG | + | chr1.1:54891525-54891544 | MS.gene004697:CDS | 45.0% |
| ! | ACTGAGAAGGACTTGGTAGT+TGG | + | chr1.1:54890065-54890084 | MS.gene004697:CDS | 45.0% |
| ! | CAAGCTGTTGGGTCTTTTGA+AGG | + | chr1.1:54890227-54890246 | MS.gene004697:CDS | 45.0% |
| ! | CTGAGAAGGACTTGGTAGTT+GGG | + | chr1.1:54890066-54890085 | MS.gene004697:CDS | 45.0% |
| ! | GAGTGCTGTAGATTCTGCTT+TGG | + | chr1.1:54891297-54891316 | MS.gene004697:CDS | 45.0% |
| ! | GATGTGACTGTTGCTATTGG+AGG | + | chr1.1:54890374-54890393 | MS.gene004697:CDS | 45.0% |
| ! | GCTTGCATTCTACCGGTTAA+AGG | + | chr1.1:54891573-54891592 | MS.gene004697:CDS | 45.0% |
| ! | GCTTGTTAGAACCAGCCAAT+GGG | + | chr1.1:54891818-54891837 | MS.gene004697:CDS | 45.0% |
| ! | GTTGCTATTGGAGGAACTGT+AGG | + | chr1.1:54890383-54890402 | MS.gene004697:CDS | 45.0% |
| ! | TAAGTTGGCTAGCAACCCTA+CGG | - | chr1.1:54892044-54892063 | None:intergenic | 45.0% |
| ! | TCCCTTCTCCCCTAATTTTG+AGG | + | chr1.1:54892152-54892171 | MS.gene004697:CDS | 45.0% |
| ! | TGAGAAGGACTTGGTAGTTG+GGG | + | chr1.1:54890067-54890086 | MS.gene004697:CDS | 45.0% |
| ! | TGGTGTTTGTGGTAGTGTTG+AGG | + | chr1.1:54890307-54890326 | MS.gene004697:CDS | 45.0% |
| ! | TTCTGGAGACACTTCTCTGA+TGG | + | chr1.1:54892089-54892108 | MS.gene004697:CDS | 45.0% |
| !! | AAGGAGGTAGTTGAGTTGGA+TGG | + | chr1.1:54890260-54890279 | MS.gene004697:CDS | 45.0% |
| !! | AATGAGGTAGTTGAGTTGGG+TGG | + | chr1.1:54890452-54890471 | MS.gene004697:CDS | 45.0% |
| !! | AGCTTGTTAGAACCAGCCAA+TGG | + | chr1.1:54891817-54891836 | MS.gene004697:CDS | 45.0% |
| !! | ATGAGGTAGTTGAGTTGGGT+GGG | + | chr1.1:54890453-54890472 | MS.gene004697:CDS | 45.0% |
| !! | ATTCGGGTTGAGTCAGATGA+AGG | + | chr1.1:54890725-54890744 | MS.gene004697:CDS | 45.0% |
| !! | CAATGTTACTCGGGTTGAGT+TGG | + | chr1.1:54890559-54890578 | MS.gene004697:CDS | 45.0% |
| !! | TTCGGGTTGAGTCAGATGAA+GGG | + | chr1.1:54890726-54890745 | MS.gene004697:CDS | 45.0% |
| !! | TTTTGGTAGCAATCACGCTG+AGG | + | chr1.1:54892575-54892594 | MS.gene004697:CDS | 45.0% |
| !!! | ACAGGTTTTTCTGGCTCAGA+AGG | - | chr1.1:54892516-54892535 | None:intergenic | 45.0% |
| !!! | CAGGTTTTTCTGGCTCAGAA+GGG | - | chr1.1:54892515-54892534 | None:intergenic | 45.0% |
| AATATCTGTCCTGGCCACCA+TGG | - | chr1.1:54891109-54891128 | None:intergenic | 50.0% | |
| AGGAGGAGGAGGATTGTCTA+GGG | - | chr1.1:54890009-54890028 | None:intergenic | 50.0% | |
| AGGGTTGCTAGCCAACTTAC+TGG | + | chr1.1:54892045-54892064 | MS.gene004697:CDS | 50.0% | |
| ATACACGTAGGTCCTGTTCC+AGG | + | chr1.1:54892544-54892563 | MS.gene004697:CDS | 50.0% | |
| ATCATTGTGGCCAGTGATCC+TGG | + | chr1.1:54892324-54892343 | MS.gene004697:CDS | 50.0% | |
| ATGCAATTCCTGGTCCTGTG+TGG | - | chr1.1:54892910-54892929 | None:intergenic | 50.0% | |
| CATGTCCCCATGAAGAGTTC+AGG | + | chr1.1:54891019-54891038 | MS.gene004697:CDS | 50.0% | |
| CCTCCTCCTATAGAGGTTGA+GGG | + | chr1.1:54890023-54890042 | MS.gene004697:CDS | 50.0% | |
| GAACGTACGCGTGGAATGAA+GGG | + | chr1.1:54891206-54891225 | MS.gene004697:CDS | 50.0% | |
| GAATCTGGATTCCCATTGGC+TGG | - | chr1.1:54891832-54891851 | None:intergenic | 50.0% | |
| GACACTTCTCTGATGGCAGA+TGG | + | chr1.1:54892096-54892115 | MS.gene004697:CDS | 50.0% | |
| GAGGTTCCTGAAAAACCTGC+TGG | + | chr1.1:54892594-54892613 | MS.gene004697:CDS | 50.0% | |
| GAGTTGGATGGAGGGAAAGT+TGG | + | chr1.1:54890575-54890594 | MS.gene004697:CDS | 50.0% | |
| GATCCCTCAACCTCTATAGG+AGG | - | chr1.1:54890029-54890048 | None:intergenic | 50.0% | |
| GGAGGAGTTGAAGGGTTTCA+GGG | + | chr1.1:54890200-54890219 | MS.gene004697:CDS | 50.0% | |
| GGATGAGCAGAAGAAGAAGG+AGG | + | chr1.1:54890499-54890518 | MS.gene004697:CDS | 50.0% | |
| GGGTTGCTAGCCAACTTACT+GGG | + | chr1.1:54892046-54892065 | MS.gene004697:CDS | 50.0% | |
| GTTTACGTTTGCGACGGGAT+TGG | - | chr1.1:54891762-54891781 | None:intergenic | 50.0% | |
| TCAACCTCTATAGGAGGAGG+AGG | - | chr1.1:54890023-54890042 | None:intergenic | 50.0% | |
| TCAGGAGATTCACCTATGGC+TGG | - | chr1.1:54892393-54892412 | None:intergenic | 50.0% | |
| TCATTGTGGCCAGTGATCCT+GGG | + | chr1.1:54892325-54892344 | MS.gene004697:CDS | 50.0% | |
| TCCTCCTCCTATAGAGGTTG+AGG | + | chr1.1:54890022-54890041 | MS.gene004697:CDS | 50.0% | |
| TGAGCAGAAGAAGAAGGAGG+AGG | + | chr1.1:54890502-54890521 | MS.gene004697:CDS | 50.0% | |
| TGGAGGAGTTGAAGGGTTTC+AGG | + | chr1.1:54890199-54890218 | MS.gene004697:CDS | 50.0% | |
| TGGGTAGCACAGGAACCAAA+GGG | + | chr1.1:54892246-54892265 | MS.gene004697:CDS | 50.0% | |
| ! | CACTCGGTGAGTAGTTAAGC+TGG | - | chr1.1:54892860-54892879 | None:intergenic | 50.0% |
| ! | CTCTGCTGCTTGCATTCTAC+CGG | + | chr1.1:54891566-54891585 | MS.gene004697:CDS | 50.0% |
| ! | TTTTGCTACCACACAGGACC+AGG | + | chr1.1:54892899-54892918 | MS.gene004697:CDS | 50.0% |
| !! | GAATGATCTGGTTTGGGGCA+AGG | + | chr1.1:54891072-54891091 | MS.gene004697:CDS | 50.0% |
| !! | GGACTTGGTAGTTGGGGTTT+TGG | + | chr1.1:54890073-54890092 | MS.gene004697:CDS | 50.0% |
| !! | GTTACTCGGGTTGAGTTGGA+TGG | + | chr1.1:54890563-54890582 | MS.gene004697:CDS | 50.0% |
| !! | TTTGCGACGGGATTGGTTTG+TGG | - | chr1.1:54891755-54891774 | None:intergenic | 50.0% |
| AAGACGGGTCGAATTTGGGC+TGG | + | chr1.1:54891330-54891349 | MS.gene004697:CDS | 55.0% | |
| ACCTCTATAGGAGGAGGAGG+AGG | - | chr1.1:54890020-54890039 | None:intergenic | 55.0% | |
| AGGTGAGAAGCCATCCATGG+TGG | + | chr1.1:54891092-54891111 | MS.gene004697:CDS | 55.0% | |
| ATCAGTACGCTGACGTCCCA+AGG | + | chr1.1:54891938-54891957 | MS.gene004697:CDS | 55.0% | |
| CCCTCAACCTCTATAGGAGG+AGG | - | chr1.1:54890026-54890045 | None:intergenic | 55.0% | |
| GAGGAGGAGGAGGATTGTCT+AGG | - | chr1.1:54890010-54890029 | None:intergenic | 55.0% | |
| GCAAGGTGAGAAGCCATCCA+TGG | + | chr1.1:54891089-54891108 | MS.gene004697:CDS | 55.0% | |
| GGAACGTACGCGTGGAATGA+AGG | + | chr1.1:54891205-54891224 | MS.gene004697:CDS | 55.0% | |
| GTGGGTAGCACAGGAACCAA+AGG | + | chr1.1:54892245-54892264 | MS.gene004697:CDS | 55.0% | |
| TAGAGGGCGACCCAGTAAGT+TGG | - | chr1.1:54892059-54892078 | None:intergenic | 55.0% | |
| TCAGTACGCTGACGTCCCAA+GGG | + | chr1.1:54891939-54891958 | MS.gene004697:CDS | 55.0% | |
| TCCTCCTCCTCCTCCTATAG+AGG | + | chr1.1:54890016-54890035 | MS.gene004697:CDS | 55.0% | |
| !! | ACTCGGGTTGAGTTGGATGG+AGG | + | chr1.1:54890566-54890585 | MS.gene004697:CDS | 55.0% |
| !! | CTCGGGTTGAGTTGGATGGA+GGG | + | chr1.1:54890567-54890586 | MS.gene004697:CDS | 55.0% |
| AGAAGCCATCCATGGTGGCC+AGG | + | chr1.1:54891097-54891116 | MS.gene004697:CDS | 60.0% | |
| AGGAAGCAAGCGGGCAAGAG+TGG | + | chr1.1:54892752-54892771 | MS.gene004697:CDS | 60.0% | |
| ATGGGGATGGAACGTACGCG+TGG | + | chr1.1:54891197-54891216 | MS.gene004697:CDS | 60.0% | |
| GAAGGGACGCGCTCATAGTC+TGG | - | chr1.1:54892498-54892517 | None:intergenic | 60.0% | |
| GCCGAAAGCAGCTTGCGCAT+CGG | - | chr1.1:54892793-54892812 | None:intergenic | 60.0% | |
| GCTGACGTCCCAAGGGTGAA+AGG | + | chr1.1:54891946-54891965 | MS.gene004697:CDS | 60.0% | |
| TCCTTCGGATGCATCTGCGC+AGG | + | chr1.1:54891132-54891151 | MS.gene004697:CDS | 60.0% | |
| TCTGTCCTGGCCACCATGGA+TGG | - | chr1.1:54891105-54891124 | None:intergenic | 60.0% | |
| ! | GCCGATGCGCAAGCTGCTTT+CGG | + | chr1.1:54892789-54892808 | MS.gene004697:CDS | 60.0% |
| GCCTGCGCAGATGCATCCGA+AGG | - | chr1.1:54891136-54891155 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.1 | gene | 54889987 | 54892965 | 54889987 | ID=MS.gene004697 |
| chr1.1 | mRNA | 54889987 | 54892965 | 54889987 | ID=MS.gene004697.t1;Parent=MS.gene004697 |
| chr1.1 | exon | 54889987 | 54892965 | 54889987 | ID=MS.gene004697.t1.exon1;Parent=MS.gene004697.t1 |
| chr1.1 | CDS | 54889987 | 54892965 | 54889987 | ID=cds.MS.gene004697.t1;Parent=MS.gene004697.t1 |
| Gene Sequence |
| Protein sequence |
