AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene79130


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene79130.t1 MTR_3g085840 93.047 1395 47 3 1 1395 1 1345 0.0 2612
MS.gene79130.t1 MTR_3g031040 76.584 1499 238 18 3 1395 12 1503 0.0 2248
MS.gene79130.t1 MTR_1g075370 53.078 1072 377 23 72 1091 1 998 0.0 993
MS.gene79130.t1 MTR_1g051315 46.494 1355 451 34 21 1313 7 1149 0.0 988
MS.gene79130.t1 MTR_0756s0010 54.859 638 218 11 182 776 385 995 0.0 629
MS.gene79130.t1 MTR_0756s0010 36.105 457 154 15 898 1350 1 323 1.18e-46 183
MS.gene79130.t1 MTR_7g089790 23.039 612 393 21 10 583 92 663 7.81e-26 115
MS.gene79130.t1 MTR_8g447140 50.667 75 34 1 21 92 7 81 2.83e-19 84.0
MS.gene79130.t1 MTR_6g029500 32.237 152 69 7 400 550 4 122 6.04e-11 61.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene79130.t1 AT3G23890 54.903 1448 524 25 8 1380 29 1422 0.0 1416
MS.gene79130.t1 AT3G23890 53.877 1483 520 28 8 1380 29 1457 0.0 1415
MS.gene79130.t1 AT5G04130 23.941 614 385 23 10 583 98 669 6.92e-20 96.7
MS.gene79130.t1 AT3G10270 22.329 627 379 23 10 583 96 667 4.09e-18 90.9
MS.gene79130.t1 AT3G10270 22.329 627 379 23 10 583 106 677 8.68e-18 89.7
MS.gene79130.t1 AT3G10690 24.766 428 255 18 636 1013 123 533 2.79e-13 75.5

Find 322 sgRNAs with CRISPR-Local

Find 489 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGAACGGCTATTGTTGATTT+TGG 0.123914 3.1:-68647501 MS.gene79130:CDS
TAGCTCGGTGTAAATGTATT+TGG 0.132014 3.1:+68648578 None:intergenic
AGTCTTGCAAATACAATTAT+TGG 0.132648 3.1:-68648784 MS.gene79130:CDS
CTGTGAGGCTTAGCCCTTGC+TGG 0.207892 3.1:+68645912 None:intergenic
AATAAAGTCAGATTTATATT+AGG 0.224832 3.1:-68647476 MS.gene79130:CDS
GATAATTCTTCAATGGAAAT+TGG 0.225683 3.1:-68646896 MS.gene79130:intron
CTCAATCCAAACGGTCAATT+TGG 0.227702 3.1:-68648721 MS.gene79130:CDS
TAGTAAACTAACCCTTATTA+TGG 0.235440 3.1:+68649804 None:intergenic
CGTTCTATTTCCTACGTTCC+TGG 0.237557 3.1:-68652367 MS.gene79130:CDS
TGGACTTCTCAGCACATTTC+AGG 0.242262 3.1:+68651290 None:intergenic
CAAATTATACAGAAGATTCT+TGG 0.253730 3.1:-68650138 MS.gene79130:CDS
ATAAAGTCAGATTTATATTA+GGG 0.257408 3.1:-68647475 MS.gene79130:CDS
AATCACGGAACGACATAAAA+TGG 0.262230 3.1:+68651326 None:intergenic
AGTTTACCACTCCCATAATA+AGG 0.264107 3.1:-68649816 MS.gene79130:CDS
AAGACACATAACCGATAAAT+TGG 0.273060 3.1:+68648836 None:intergenic
CCATCCTTTAGCATTGATTC+TGG 0.273813 3.1:+68650768 None:intergenic
TATGTTCCTGAATTGTTCTT+TGG 0.274917 3.1:-68652187 MS.gene79130:CDS
CCTTGGCAGGGGTGCAGGTT+TGG 0.284822 3.1:+68651270 None:intergenic
ATATGGTCATTTGATGATTA+TGG 0.291285 3.1:-68650073 MS.gene79130:CDS
TATTATGATCAACCGGAAAA+AGG 0.292131 3.1:-68647435 MS.gene79130:CDS
TAAACTTTATTCATTCATTC+TGG 0.294162 3.1:-68649873 MS.gene79130:CDS
GAAAGTACTCTCTCCCTTCT+TGG 0.298326 3.1:+68649177 None:intergenic
CACTCGCTACATATTTGTTT+TGG 0.299826 3.1:+68645877 None:intergenic
GAAGCTTATCATCATCTTCA+TGG 0.304545 3.1:+68648532 None:intergenic
GCAAATGTTATACTTTGTTC+TGG 0.306576 3.1:+68647753 None:intergenic
CAGCTTCTGCACACTTTCTA+TGG 0.313544 3.1:+68647253 None:intergenic
ACCCTTGTATCTAATGAGTT+TGG 0.316681 3.1:+68649002 None:intergenic
TTAGTTTCAGAATCAAAATC+AGG 0.316996 3.1:+68650840 None:intergenic
CCAGAGGTCCATTCCCTCTA+TGG 0.319756 3.1:-68648938 MS.gene79130:CDS
GGTTGTGGCGGCTTCATTGC+AGG 0.324027 3.1:+68646962 None:intergenic
TTCTCCCTCCCTTCTTAACT+AGG 0.325832 3.1:+68646234 None:intergenic
TCAACCACAAAGACTTTGTT+GGG 0.329813 3.1:+68647180 None:intergenic
AGCTCGGTGTAAATGTATTT+GGG 0.333785 3.1:+68648579 None:intergenic
TTGGAAGATAAAGTACTATA+AGG 0.334107 3.1:-68649525 MS.gene79130:intron
AAAATACCAGTTTGGTTCAA+TGG 0.335244 3.1:+68648482 None:intergenic
ATTAAAGTTAGCCAATTTAT+CGG 0.335407 3.1:-68648847 MS.gene79130:CDS
TCTGTATAATTTGAAATTCT+CGG 0.335631 3.1:+68650148 None:intergenic
TTGGTGTTTGTATAGGGGTT+GGG 0.336370 3.1:-68649212 MS.gene79130:intron
ACGACTAGTCAAGCTAGTTT+TGG 0.336970 3.1:-68650807 MS.gene79130:CDS
GTCAATGGTAGTGAAGAAAT+TGG 0.338812 3.1:-68648333 MS.gene79130:CDS
ATCTAACCAAGCAAGTAAAA+AGG 0.339756 3.1:-68647008 MS.gene79130:CDS
CGTTAAAATCTGCCCATGAT+AGG 0.355119 3.1:+68650628 None:intergenic
TTAAACACCGATCCTCCTTT+TGG 0.359986 3.1:+68646741 None:intergenic
TCCATTCCCTCTATGGTTGA+TGG 0.370809 3.1:-68648931 MS.gene79130:CDS
ATTTCTGCAGTTGAAACATC+TGG 0.374879 3.1:-68650666 MS.gene79130:intron
TCTATGGTCAAAGTTTCAAT+AGG 0.375288 3.1:+68647269 None:intergenic
AGCACATGAAAGAATTCATA+TGG 0.378827 3.1:-68649142 MS.gene79130:CDS
TCACATTATAATCATAGTTA+AGG 0.381396 3.1:+68652161 None:intergenic
AGTTGAAACATCTGGAATAA+TGG 0.382009 3.1:-68650658 MS.gene79130:CDS
AATTTCCCTTGGATTATAGT+TGG 0.383526 3.1:+68648287 None:intergenic
CACTAGTCACCTGTTGAAAC+TGG 0.387730 3.1:+68651115 None:intergenic
ATTGAAGAATTATCATTCTC+TGG 0.388051 3.1:+68646905 None:intergenic
AACAAAGTCTTTGTGGTTGA+AGG 0.401089 3.1:-68647177 MS.gene79130:CDS
ATTCCTTTGGTTCTTGTCAA+TGG 0.401277 3.1:-68648348 MS.gene79130:CDS
ACTGAAACCGTATTCCCTTC+CGG 0.404220 3.1:+68652262 None:intergenic
AAAGTACTCTCTCCCTTCTT+GGG 0.404928 3.1:+68649178 None:intergenic
GAGAAAACAAAATACCAGTT+TGG 0.405191 3.1:+68648474 None:intergenic
GTTAGGCGTCCCTTCAGTTA+TGG 0.407641 3.1:+68648056 None:intergenic
CGAGTACCAAATTGACCGTT+TGG 0.409556 3.1:+68648715 None:intergenic
CGAAGGAATGTTGGCGCCCA+TGG 0.410908 3.1:+68652504 None:intergenic
GTACATACCCATCATTCCTT+TGG 0.410935 3.1:-68648361 MS.gene79130:CDS
CAAATTGAAGATTTGTCTCC+TGG 0.414807 3.1:-68645990 MS.gene79130:CDS
GAAAATCCATTGAACCAAAC+TGG 0.416211 3.1:-68648488 MS.gene79130:intron
TGTTTACTTTGTTCATTACA+TGG 0.416598 3.1:+68650943 None:intergenic
GTTCCTTCCACCAGCATCAT+TGG 0.419990 3.1:+68650533 None:intergenic
GAAGTCAAGTACCATAGGTT+TGG 0.420212 3.1:-68646321 MS.gene79130:CDS
GAAGAAGCGTGTGTTGGATA+TGG 0.425193 3.1:-68651398 MS.gene79130:CDS
GAATCACAGAGCTTCCTATA+CGG 0.429439 3.1:-68648113 MS.gene79130:CDS
ATTAGGATTCATGCTATAGT+AGG 0.430575 3.1:-68651174 MS.gene79130:intron
TACGGGTTCTTCACTTTCCA+TGG 0.430839 3.1:+68646388 None:intergenic
AGTAAACTAACCCTTATTAT+GGG 0.431631 3.1:+68649805 None:intergenic
ACGAACCTTGGCAGGGGTGC+AGG 0.432853 3.1:+68651265 None:intergenic
AAAACTACTAGTGGAAGAAA+TGG 0.433356 3.1:-68652136 MS.gene79130:CDS
GTTTACCACTCCCATAATAA+GGG 0.434319 3.1:-68649815 MS.gene79130:intron
CAGCAAGGGCTAAGCCTCAC+AGG 0.435173 3.1:-68645911 MS.gene79130:CDS
TTAATCTGTTTCTTCCCAGC+AGG 0.435223 3.1:+68646365 None:intergenic
ACCACCTCATTCTTTGCTAT+AGG 0.435311 3.1:+68645951 None:intergenic
GGCTTAGCCCTTGCTGGGTG+TGG 0.435846 3.1:+68645918 None:intergenic
ATTTCCCTTGGATTATAGTT+GGG 0.437149 3.1:+68648288 None:intergenic
AATCAATCCGGAAGGGAATA+CGG 0.437492 3.1:-68652269 MS.gene79130:CDS
TTACAATCCCACGGATCCTC+TGG 0.438236 3.1:+68650568 None:intergenic
TGATAATTCTGCATCCTCAT+TGG 0.439271 3.1:+68645833 None:intergenic
TTGAGCAATTTGTCTCTCAA+TGG 0.439762 3.1:+68650207 None:intergenic
TAATGGACACCCTCCTATCA+TGG 0.440973 3.1:-68650641 MS.gene79130:CDS
AGGTGACCAAAGAACAATTC+AGG 0.442324 3.1:+68652181 None:intergenic
GGTTTACGAAAATGAAGAAA+TGG 0.443195 3.1:-68652395 MS.gene79130:CDS
ATGACCGAAGCTACTTTGTC+CGG 0.443710 3.1:+68647873 None:intergenic
TCTTCCTTATGAAGCCCTAC+TGG 0.444800 3.1:+68652217 None:intergenic
TGAGTTTGGCTTCAAGATCA+TGG 0.445665 3.1:+68649016 None:intergenic
GAAGGCTGCCCTAGTTAAGA+AGG 0.446911 3.1:-68646243 MS.gene79130:CDS
CTGCAGGCTTCTCATTCAAA+CGG 0.447331 3.1:-68649620 MS.gene79130:intron
GACAAGAACCAAAGGAATGA+TGG 0.448034 3.1:+68648353 None:intergenic
GAGTTCAGAAGGAGCAGCAT+GGG 0.448483 3.1:-68647318 MS.gene79130:CDS
GCTAGATGAAAAGGCTGAAA+AGG 0.454299 3.1:-68647231 MS.gene79130:CDS
GAGAAATTATTATGATCAAC+CGG 0.455949 3.1:-68647442 MS.gene79130:CDS
TCAATTTGGTACTCGTAACT+TGG 0.458241 3.1:-68648707 MS.gene79130:intron
AGAGGATCCGTGGGATTGTA+AGG 0.459252 3.1:-68650566 MS.gene79130:CDS
ATGGCTGGCCTCTCTGTTGT+GGG 0.459306 3.1:-68650252 MS.gene79130:CDS
TTTATATTAGGGGTTGTGAA+TGG 0.459786 3.1:-68647464 MS.gene79130:CDS
TTTGATGATTATGGCTGATC+AGG 0.460438 3.1:-68650064 MS.gene79130:intron
GATGGCTGGCCTCTCTGTTG+TGG 0.462505 3.1:-68650253 MS.gene79130:CDS
GTCTTCTTAGTATTCTTTCG+TGG 0.464576 3.1:+68646941 None:intergenic
TTCAACCACAAAGACTTTGT+TGG 0.464711 3.1:+68647179 None:intergenic
TCTTCAGTCCACTTCCGTAT+AGG 0.466602 3.1:+68648099 None:intergenic
CTGCAGAACCACAAGTTGTA+GGG 0.466821 3.1:-68647352 MS.gene79130:CDS
TTTAAGACCATCAACCATAG+AGG 0.467662 3.1:+68648924 None:intergenic
GAAGAAACAGATTAACAAAA+GGG 0.468180 3.1:-68646357 MS.gene79130:CDS
AGTGAAGAACCCGTACCTGC+TGG 0.468531 3.1:-68646380 MS.gene79130:CDS
TTAGTATTCTTTCGTGGTTG+TGG 0.469155 3.1:+68646947 None:intergenic
AGTTGAACCTATGTAGGTAT+CGG 0.469545 3.1:+68652441 None:intergenic
AAGTGATGGCCAGTTTCAAC+AGG 0.469561 3.1:-68651124 MS.gene79130:intron
CTGTTTCTTCCCAGCAGGTA+CGG 0.470590 3.1:+68646370 None:intergenic
TGCAAATACAATTATTGGAA+TGG 0.473313 3.1:-68648779 MS.gene79130:CDS
TGTGAGGCTTAGCCCTTGCT+GGG 0.475880 3.1:+68645913 None:intergenic
AAATCAACAATAGCCGTTCA+AGG 0.478094 3.1:+68647504 None:intergenic
TCTGCAGAACCACAAGTTGT+AGG 0.481272 3.1:-68647353 MS.gene79130:CDS
AATGCAATGCTAGTGAGAAC+TGG 0.481313 3.1:-68651495 MS.gene79130:CDS
TTTGTTGAACGAAGAGGAAA+TGG 0.482559 3.1:-68648247 MS.gene79130:CDS
TGCAGGCTTCTCATTCAAAC+GGG 0.482951 3.1:-68649619 MS.gene79130:intron
ACATTGGCAATAATTTCCCT+TGG 0.483332 3.1:+68648276 None:intergenic
GGAAGAAACAGATTAACAAA+AGG 0.484750 3.1:-68646358 MS.gene79130:CDS
TACATGGGCAATAATCTGAT+TGG 0.485166 3.1:+68650959 None:intergenic
GAACCCCAACAAAGTCTTTG+TGG 0.485525 3.1:-68647184 MS.gene79130:CDS
CCATAGAGGGAATGGACCTC+TGG 0.485754 3.1:+68648938 None:intergenic
GGTAGTGAAGAAATTGGAAC+AGG 0.487515 3.1:-68648327 MS.gene79130:CDS
ATCCATCGACGGATCTCTCT+TGG 0.488569 3.1:+68652306 None:intergenic
GAATCACCTGGTGAAAAGTC+GGG 0.489951 3.1:-68646557 MS.gene79130:CDS
AGAGAATGATAATTCTTCAA+TGG 0.492510 3.1:-68646903 MS.gene79130:CDS
GTTCTCACTAGCATTGCATT+CGG 0.494287 3.1:+68651498 None:intergenic
TCAGTTTATAACAATGGTTA+CGG 0.494779 3.1:-68652244 MS.gene79130:CDS
AGAAGAAAGTGAGGAAAATG+AGG 0.495172 3.1:-68646079 MS.gene79130:CDS
TAACTCGATTGCTACAATCA+AGG 0.495201 3.1:-68651006 MS.gene79130:CDS
AGCCAAACTCATTAGATACA+AGG 0.496211 3.1:-68649004 MS.gene79130:CDS
TGTTTCTTCCCAGCAGGTAC+GGG 0.496888 3.1:+68646371 None:intergenic
AAGAGCTAATATTGTTCTCA+AGG 0.497566 3.1:-68648969 MS.gene79130:CDS
TTGATTGAGTTGAAGCAGAA+AGG 0.498084 3.1:-68647404 MS.gene79130:CDS
TCTCCCTCCCTTCTTAACTA+GGG 0.498714 3.1:+68646235 None:intergenic
GGTAACCTTTAAGCCTGACT+TGG 0.499133 3.1:-68651467 MS.gene79130:CDS
GTAGCGGTTCTACACTGTAC+AGG 0.499672 3.1:-68646034 MS.gene79130:CDS
TTGGATATGGCAGGGTGCCT+TGG 0.499948 3.1:-68651385 MS.gene79130:CDS
TCATTTGCCCCTACAACTTG+TGG 0.500822 3.1:+68647344 None:intergenic
TGAAAAGGCTGAAAAGGAAA+AGG 0.502231 3.1:-68647225 MS.gene79130:CDS
ACTAGTGGAAGAAATGGTTA+TGG 0.502361 3.1:-68652130 MS.gene79130:CDS
GTTGAAGTTGCAAAACCAAA+AGG 0.503616 3.1:-68646756 MS.gene79130:CDS
GTTGAACCTATGTAGGTATC+GGG 0.504108 3.1:+68652442 None:intergenic
GGTCAAAGTTTCAATAGGTA+AGG 0.505393 3.1:+68647274 None:intergenic
TCTATCTATTCAAGAACGCC+TGG 0.508902 3.1:-68646594 MS.gene79130:CDS
GTGCCTTGGAAAGACTGTTA+AGG 0.509395 3.1:-68651371 MS.gene79130:CDS
GAAGCCGGACAAAGTAGCTT+CGG 0.512432 3.1:-68647877 MS.gene79130:CDS
CTTAAATACTTGAATGAGGA+GGG 0.512870 3.1:-68648510 MS.gene79130:CDS
AGATTTACCTTTCCTCAGCA+TGG 0.513443 3.1:+68647373 None:intergenic
ACTGTTAAGGTTGAACTCAA+TGG 0.514632 3.1:-68651358 MS.gene79130:CDS
AATGTGAAGTCTTTGAGATA+TGG 0.515396 3.1:-68650090 MS.gene79130:CDS
GCAGAAGCTGCTAGATGAAA+AGG 0.515598 3.1:-68647240 MS.gene79130:CDS
GCTTCTTAAATACTTGAATG+AGG 0.516357 3.1:-68648514 MS.gene79130:CDS
GATTTACCTTTCCTCAGCAT+GGG 0.516552 3.1:+68647374 None:intergenic
CGAAGAGGAAATGGTGCCAA+TGG 0.518495 3.1:-68648238 MS.gene79130:CDS
TGCTGCTCAAAATGCCAAGA+AGG 0.518960 3.1:-68646207 MS.gene79130:CDS
TAGGGAACAATGCAAACTGT+TGG 0.521374 3.1:-68649544 MS.gene79130:CDS
ACTATCTGATTCCAAACCTA+TGG 0.522341 3.1:+68646310 None:intergenic
ATCAATCTTCTCAATCCAAA+CGG 0.522489 3.1:-68648730 MS.gene79130:CDS
ATGAAAGGATCGTTGACGTT+AGG 0.522841 3.1:+68648039 None:intergenic
ACTCAAAGTTACAATCAATC+CGG 0.524366 3.1:-68652281 MS.gene79130:CDS
GTAGGCACCAGACAAACATT+TGG 0.524796 3.1:-68646158 MS.gene79130:CDS
TTTGTTATTGAGATTGCTGA+TGG 0.525377 3.1:-68652076 MS.gene79130:CDS
GTAAACTCAACGATGAAAGA+TGG 0.526136 3.1:+68649832 None:intergenic
GTGAAGAAATTGGAACAGGT+TGG 0.527001 3.1:-68648323 MS.gene79130:CDS
CGTCAACGATCCTTTCATTG+AGG 0.527658 3.1:-68648034 MS.gene79130:intron
CCTCTGTACCATGGATCCAT+TGG 0.528260 3.1:+68648222 None:intergenic
ACTGTACAGGGCTGCTAACA+AGG 0.529732 3.1:-68646021 MS.gene79130:CDS
CCACACTTCATATTCTGACA+TGG 0.531088 3.1:+68649577 None:intergenic
TATCATCATCTTCATGGAAG+AGG 0.531461 3.1:+68648538 None:intergenic
CAAGGAGGCTATAAAGTCAA+TGG 0.532917 3.1:-68648168 MS.gene79130:CDS
TTTCTTGAATCCATAACTGA+AGG 0.534007 3.1:-68648066 MS.gene79130:CDS
CATGATGGCTCCCACATCAA+AGG 0.534985 3.1:-68649904 MS.gene79130:CDS
TGAATCACCTGGTGAAAAGT+CGG 0.535897 3.1:-68646558 MS.gene79130:CDS
GAACGACATAAAATGGATCA+AGG 0.538518 3.1:+68651333 None:intergenic
TCTCAGCACATTTCAGGAAG+AGG 0.539455 3.1:+68651296 None:intergenic
ATGATGGCTCCCACATCAAA+GGG 0.540052 3.1:-68649903 MS.gene79130:CDS
ACCATCAACCATAGAGGGAA+TGG 0.540383 3.1:+68648930 None:intergenic
CAACAATAGCCGTTCAAGGT+TGG 0.540564 3.1:+68647508 None:intergenic
GCATTGCATTCGGTTATCAC+TGG 0.541654 3.1:+68651508 None:intergenic
TTCATGCTATAGTAGGTGAT+AGG 0.542978 3.1:-68651167 MS.gene79130:CDS
GGAGAGTTAGAAGCAGAACC+AGG 0.543291 3.1:+68645972 None:intergenic
TTGCATTCTGCTTACCACCA+TGG 0.545407 3.1:-68648814 MS.gene79130:CDS
AACTCGATTGCTACAATCAA+GGG 0.545993 3.1:-68651005 MS.gene79130:CDS
CTTGAGGATGCCAATGATGC+TGG 0.547267 3.1:-68650543 MS.gene79130:CDS
GTTTACTTTGTTCATTACAT+GGG 0.548930 3.1:+68650944 None:intergenic
TGTTCCAGAATCAATGCTAA+AGG 0.550167 3.1:-68650772 MS.gene79130:CDS
TCAAGATCATGGCAAGTGCT+AGG 0.550399 3.1:+68649027 None:intergenic
GTGAAGAACCCGTACCTGCT+GGG 0.550816 3.1:-68646379 MS.gene79130:CDS
AAGCGTGTGTTGGATATGGC+AGG 0.550856 3.1:-68651394 MS.gene79130:CDS
CAGAGCTTCCTATACGGAAG+TGG 0.551630 3.1:-68648107 MS.gene79130:CDS
TGCTATAGTAGGTGATAGGT+GGG 0.551931 3.1:-68651163 MS.gene79130:CDS
TAAAATGACATATCTTGAAG+AGG 0.552305 3.1:-68651437 MS.gene79130:CDS
AGTCATGTTACCTCAATGAA+AGG 0.552558 3.1:+68648024 None:intergenic
TGTTCCAGTAGGGCTTCATA+AGG 0.552592 3.1:-68652221 MS.gene79130:CDS
ACAATTATTGGAATGGCACA+AGG 0.554573 3.1:-68648772 MS.gene79130:CDS
GAAGAAAGTGAGGAAAATGA+GGG 0.555445 3.1:-68646078 MS.gene79130:CDS
ACAAGAACCAAAGGAATGAT+GGG 0.555492 3.1:+68648354 None:intergenic
CAACCTTAACAGTCTTTCCA+AGG 0.556617 3.1:+68651368 None:intergenic
ATGGTTACGGTGTTCCAGTA+GGG 0.556801 3.1:-68652231 MS.gene79130:CDS
GCAAATGATGAGAGTTCAGA+AGG 0.557163 3.1:-68647329 MS.gene79130:CDS
ACGGTTTCAGTTTATAACAA+TGG 0.558477 3.1:-68652250 MS.gene79130:CDS
GGATTATTATGAGAGGAGAA+AGG 0.558856 3.1:-68647645 MS.gene79130:intron
TAAAATCTGCCCATGATAGG+AGG 0.560196 3.1:+68650631 None:intergenic
GCACATGAAAGAATTCATAT+GGG 0.560488 3.1:-68649141 MS.gene79130:intron
CCAAACCTGCACCCCTGCCA+AGG 0.561209 3.1:-68651270 MS.gene79130:intron
CTGCCCTAGTTAAGAAGGGA+GGG 0.561397 3.1:-68646238 MS.gene79130:CDS
ATGGTTGATGGTCTTAAACC+TGG 0.562141 3.1:-68648919 MS.gene79130:CDS
AGACAAATTGCTCAATGTGC+GGG 0.562599 3.1:-68650199 MS.gene79130:CDS
ACTAACCCTTATTATGGGAG+TGG 0.562937 3.1:+68649810 None:intergenic
GGTACAAGCACTTCCCAAGA+AGG 0.563630 3.1:-68649191 MS.gene79130:CDS
AGATAGCAAAGAGGCAGAAG+AGG 0.564047 3.1:-68647041 MS.gene79130:CDS
ATGCTATAGTAGGTGATAGG+TGG 0.564961 3.1:-68651164 MS.gene79130:CDS
AAAACACACTCAAAATCTAT+GGG 0.565324 3.1:-68652416 MS.gene79130:CDS
AACAGTGTGAGCTTTCACAT+TGG 0.565871 3.1:+68650905 None:intergenic
ATATGTTGGCCAACCTTGAA+CGG 0.566242 3.1:-68647517 MS.gene79130:CDS
AGAGTTCAGAAGGAGCAGCA+TGG 0.569224 3.1:-68647319 MS.gene79130:CDS
GGTGTTTAAGAATACTAAGA+AGG 0.569390 3.1:-68646727 MS.gene79130:intron
GTATTCTTTCGTGGTTGTGG+CGG 0.569867 3.1:+68646950 None:intergenic
ACAAAGATCCAGAGGATCCG+TGG 0.570616 3.1:-68650576 MS.gene79130:CDS
GTTGTGGGTCGAGACCACTA+TGG 0.571250 3.1:-68650237 MS.gene79130:CDS
TTATCAATAGCCCTTTGATG+TGG 0.572425 3.1:+68649893 None:intergenic
TCTTAAATACTTGAATGAGG+AGG 0.572609 3.1:-68648511 MS.gene79130:CDS
GATGGAACTTTAAGCAGTGA+TGG 0.573604 3.1:+68649850 None:intergenic
TTTACTCCCATGCTGAGGAA+AGG 0.574558 3.1:-68647380 MS.gene79130:CDS
TGCAAAACCAAAAGGAGGAT+CGG 0.575853 3.1:-68646748 MS.gene79130:CDS
GTTCAACAAACATCTAACAT+TGG 0.575889 3.1:+68648260 None:intergenic
TAGTTTCAGAATCAAAATCA+GGG 0.576762 3.1:+68650841 None:intergenic
AAATGGTGCCAATGGATCCA+TGG 0.579152 3.1:-68648230 MS.gene79130:CDS
ACATTCCCAACTATAATCCA+AGG 0.579289 3.1:-68648293 MS.gene79130:CDS
TCGTTTGAAGAAGTATAAGC+AGG 0.579837 3.1:-68652050 MS.gene79130:intron
AAAGTTACAATCAATCCGGA+AGG 0.580372 3.1:-68652277 MS.gene79130:CDS
TTATGTGTTCAGGATCATGA+TGG 0.580803 3.1:-68649919 MS.gene79130:intron
AGCAAAGAGGCAGAAGAGGA+TGG 0.581619 3.1:-68647037 MS.gene79130:CDS
CCTCTGAATCCTCTGTACCA+TGG 0.581873 3.1:+68648213 None:intergenic
AATGGACACCCTCCTATCAT+GGG 0.582070 3.1:-68650640 MS.gene79130:CDS
TATCAATAGCCCTTTGATGT+GGG 0.582905 3.1:+68649894 None:intergenic
AGTAGGGCTTCATAAGGAAG+AGG 0.583465 3.1:-68652215 MS.gene79130:CDS
AATGTGAAGAAAACTACTAG+TGG 0.587221 3.1:-68652145 MS.gene79130:CDS
GCCAAACTCATTAGATACAA+GGG 0.587560 3.1:-68649003 MS.gene79130:CDS
TCATAATAATCCATCCGAAG+TGG 0.588073 3.1:+68647656 None:intergenic
GATCTCTCTTGGCAGCGTCA+AGG 0.589375 3.1:+68652317 None:intergenic
TGATGCAATTATAGACATTG+AGG 0.591211 3.1:-68647907 MS.gene79130:CDS
ATTCAAAGTTATATGCAGCC+AGG 0.592381 3.1:+68646576 None:intergenic
TTTGTAAAGTCCAGGAACGT+AGG 0.593610 3.1:+68652357 None:intergenic
CTCCATCCCGATACCTACAT+AGG 0.593662 3.1:-68652448 MS.gene79130:CDS
GCATATAACTTTGAATCACC+TGG 0.593747 3.1:-68646569 MS.gene79130:CDS
CCGTGGGATTGTAAGGCTTG+AGG 0.593847 3.1:-68650559 MS.gene79130:CDS
ACGAGTAACAATATTTAGCT+CGG 0.596346 3.1:+68648563 None:intergenic
CATTGAGGTCAAAATGAAGC+CGG 0.596835 3.1:-68647892 MS.gene79130:CDS
CTCTCCTATAGCAAAGAATG+AGG 0.597825 3.1:-68645955 MS.gene79130:CDS
AATGGTTACGGTGTTCCAGT+AGG 0.599296 3.1:-68652232 MS.gene79130:CDS
TTCTTGAATCCATAACTGAA+GGG 0.601569 3.1:-68648065 MS.gene79130:CDS
AGCAAGGGCTAAGCCTCACA+GGG 0.602139 3.1:-68645910 MS.gene79130:CDS
CAAAACAAATATGTAGCGAG+TGG 0.602502 3.1:-68645876 MS.gene79130:CDS
TTAAGACCATCAACCATAGA+GGG 0.605723 3.1:+68648925 None:intergenic
AAAGTAGCTTCGGTCATGCA+AGG 0.606099 3.1:-68647867 MS.gene79130:CDS
AGAGCTAATATTGTTCTCAA+GGG 0.606195 3.1:-68648968 MS.gene79130:CDS
AACCTATGTAGGTATCGGGA+TGG 0.606593 3.1:+68652446 None:intergenic
TTGCAAGACTTTGCTCACCA+TGG 0.607011 3.1:+68648797 None:intergenic
TGGTTAGGATTAGCCCTGTG+AGG 0.610607 3.1:+68645897 None:intergenic
CCAGAATCAATGCTAAAGGA+TGG 0.611127 3.1:-68650768 MS.gene79130:intron
CAAAGATCCAGAGGATCCGT+GGG 0.612993 3.1:-68650575 MS.gene79130:CDS
TTCGGATGGATTATTATGAG+AGG 0.614993 3.1:-68647652 MS.gene79130:CDS
ATTGAGAAAAGTATGAAGCA+AGG 0.616236 3.1:-68648186 MS.gene79130:CDS
CTATGTAGGTATCGGGATGG+AGG 0.617037 3.1:+68652449 None:intergenic
CGACTTCGAAGTACAACAGA+AGG 0.617273 3.1:-68646261 MS.gene79130:CDS
TAGATGTTTGTTGAACGAAG+AGG 0.617321 3.1:-68648253 MS.gene79130:CDS
AAGGCTGCCCTAGTTAAGAA+GGG 0.618423 3.1:-68646242 MS.gene79130:CDS
AGATTGCACCACACCCAGCA+AGG 0.620076 3.1:-68645926 MS.gene79130:CDS
ATGGTCTTAAACCTGGCCAA+AGG 0.625244 3.1:-68648912 MS.gene79130:CDS
GTACAAGCACTTCCCAAGAA+GGG 0.625544 3.1:-68649190 MS.gene79130:CDS
TCAATGGAAATACACCATAG+TGG 0.625653 3.1:+68650223 None:intergenic
GCTGCCCTAGTTAAGAAGGG+AGG 0.625836 3.1:-68646239 MS.gene79130:CDS
CCATGGTACAGAGGATTCAG+AGG 0.626503 3.1:-68648213 MS.gene79130:CDS
TAAAGTCAGATTTATATTAG+GGG 0.626720 3.1:-68647474 MS.gene79130:CDS
TCCTATAGCAAAGAATGAGG+TGG 0.628128 3.1:-68645952 MS.gene79130:CDS
CATTCCCAACTATAATCCAA+GGG 0.629878 3.1:-68648292 MS.gene79130:CDS
AAATGTATTTGGGACTAGCA+TGG 0.630458 3.1:+68648589 None:intergenic
ATGCCAATGATGCTGGTGGA+AGG 0.630984 3.1:-68650536 MS.gene79130:CDS
AAAATCTGCCCATGATAGGA+GGG 0.631691 3.1:+68650632 None:intergenic
CTACCATTGACAAGAACCAA+AGG 0.635115 3.1:+68648345 None:intergenic
TCGATTGCTACAATCAAGGG+TGG 0.635833 3.1:-68651002 MS.gene79130:CDS
TGCAGAACCACAAGTTGTAG+GGG 0.636913 3.1:-68647351 MS.gene79130:CDS
TTTGATGAAGAAGCGTGTGT+TGG 0.639485 3.1:-68651404 MS.gene79130:CDS
CCTCAAGCCTTACAATCCCA+CGG 0.641819 3.1:+68650559 None:intergenic
CCATTTAACAAGAAAAGTAG+CGG 0.642659 3.1:-68646050 MS.gene79130:CDS
GAGACAAATTGCTCAATGTG+CGG 0.645325 3.1:-68650200 MS.gene79130:CDS
TAGCGGTTCTACACTGTACA+GGG 0.645426 3.1:-68646033 MS.gene79130:CDS
TGAAAAGGAAAAGGAGCATG+AGG 0.646638 3.1:-68647216 MS.gene79130:CDS
CGATTGCTACAATCAAGGGT+GGG 0.649759 3.1:-68651001 MS.gene79130:CDS
CAAGACTTTGCTCACCATGG+TGG 0.650143 3.1:+68648800 None:intergenic
ATGCATGCAGAAATATATGT+TGG 0.651908 3.1:-68647531 MS.gene79130:intron
TGTACTTTGATATTGACAGA+CGG 0.653576 3.1:-68650501 MS.gene79130:CDS
GGAAGAGGTCAACATAATCA+CGG 0.653824 3.1:+68651311 None:intergenic
CTTCACCAGAGAAGAAAGTG+AGG 0.654309 3.1:-68646088 MS.gene79130:CDS
AAGTTACAATCAATCCGGAA+GGG 0.654915 3.1:-68652276 MS.gene79130:CDS
CTGATGGAACAAAGATCCAG+AGG 0.656280 3.1:-68650584 MS.gene79130:CDS
CAACCACAAAGACTTTGTTG+GGG 0.658562 3.1:+68647181 None:intergenic
CCATGTCAGAATATGAAGTG+TGG 0.658608 3.1:-68649577 MS.gene79130:CDS
CCAATGGATCCATGGTACAG+AGG 0.658753 3.1:-68648222 MS.gene79130:CDS
TGCCAAGAGAGATCCGTCGA+TGG 0.660600 3.1:-68652308 MS.gene79130:CDS
AAACAGATTAACAAAAGGGG+TGG 0.661324 3.1:-68646353 MS.gene79130:CDS
TCTCAAGGGCAGAACTCCAG+AGG 0.664883 3.1:-68648954 MS.gene79130:CDS
GAAGTTGCAAAACCAAAAGG+AGG 0.666283 3.1:-68646753 MS.gene79130:CDS
AGTTCAGAAGGAGCAGCATG+GGG 0.667533 3.1:-68647317 MS.gene79130:CDS
GATTGCACCACACCCAGCAA+GGG 0.667809 3.1:-68645925 MS.gene79130:CDS
TGCTAGTGAGAACTGGACAA+AGG 0.669686 3.1:-68651488 MS.gene79130:CDS
CAGGAACGTAGGAAATAGAA+CGG 0.670449 3.1:+68652368 None:intergenic
ACTTTGAGTGAATCCATCGA+CGG 0.676162 3.1:+68652295 None:intergenic
ATTTGCGTGAGTCTAAGTGA+TGG 0.678551 3.1:-68651138 MS.gene79130:CDS
AAGAAACAGATTAACAAAAG+GGG 0.679932 3.1:-68646356 MS.gene79130:CDS
GAGGATGCCAATGATGCTGG+TGG 0.680493 3.1:-68650540 MS.gene79130:CDS
TCAGGAGCTAGATAGCAAAG+AGG 0.689822 3.1:-68647050 MS.gene79130:intron
TCACCTGGTGAAAAGTCGGG+AGG 0.698113 3.1:-68646554 MS.gene79130:intron
GAGTGACAATGATTCCAATG+AGG 0.699738 3.1:-68645847 MS.gene79130:CDS
GAGAAAAGTATGAAGCAAGG+AGG 0.710995 3.1:-68648183 MS.gene79130:CDS
GCTTCTTCATCAAAGCAACA+AGG 0.721441 3.1:+68651413 None:intergenic
AGCGTGTGTTGGATATGGCA+GGG 0.731859 3.1:-68651393 MS.gene79130:CDS
GGTCTCGACCCACAACAGAG+AGG 0.748195 3.1:+68650244 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTAAATTTTATATTTAT+TGG - chr3.1:68649676-68649695 MS.gene79130:intron 0.0%
!! AAAATTTAAAAAGAAACGTA+GGG + chr3.1:68649668-68649687 None:intergenic 15.0%
!! AAATTAACCTATTGTATATA+TGG + chr3.1:68650330-68650349 None:intergenic 15.0%
!! AATAAAGTCAGATTTATATT+AGG - chr3.1:68650838-68650857 MS.gene79130:CDS 15.0%
!! AATGAAATGAACATAAATAT+TGG - chr3.1:68646652-68646671 MS.gene79130:intron 15.0%
!! ATAAAGTCAGATTTATATTA+GGG - chr3.1:68650839-68650858 MS.gene79130:CDS 15.0%
!! TAAAATTTAAAAAGAAACGT+AGG + chr3.1:68649669-68649688 None:intergenic 15.0%
!! TGTTGTTATATAATTTGAAT+TGG - chr3.1:68647109-68647128 MS.gene79130:intron 15.0%
!! TTCAAATTATATAACAACAA+CGG + chr3.1:68647108-68647127 None:intergenic 15.0%
!!! ATTTGTATTTGAAATAATGA+AGG - chr3.1:68651214-68651233 MS.gene79130:intron 15.0%
!!! ATTTTATTTTTGTATGAAGA+TGG - chr3.1:68648043-68648062 MS.gene79130:CDS 15.0%
!!! GAAATTTAATTTGTTGATTT+AGG - chr3.1:68646347-68646366 MS.gene79130:CDS 15.0%
!! AATTATAAACACAAAAATGG+AGG + chr3.1:68649053-68649072 None:intergenic 20.0%
!! ACGAATTATAAACACAAAAA+TGG + chr3.1:68649056-68649075 None:intergenic 20.0%
!! ATAACACATAATACTACATA+TGG - chr3.1:68651864-68651883 MS.gene79130:intron 20.0%
!! ATTAAAGTTAGCCAATTTAT+CGG - chr3.1:68649467-68649486 MS.gene79130:intron 20.0%
!! TAAACTTTATTCATTCATTC+TGG - chr3.1:68648441-68648460 MS.gene79130:intron 20.0%
!! TAAAGTCAGATTTATATTAG+GGG - chr3.1:68650840-68650859 MS.gene79130:CDS 20.0%
!! TCAAATTATATAACAACAAC+GGG + chr3.1:68647107-68647126 None:intergenic 20.0%
!! TCACATTATAATCATAGTTA+AGG + chr3.1:68646156-68646175 None:intergenic 20.0%
!! TTCAGTTCGTATTAATTAAT+TGG + chr3.1:68650750-68650769 None:intergenic 20.0%
!! TTGTAAATATTAGAGATTTG+TGG + chr3.1:68647994-68648013 None:intergenic 20.0%
!!! AAAAAGCATATCTCAAATTT+TGG - chr3.1:68647899-68647918 MS.gene79130:CDS 20.0%
!!! GAAATTGAATTTTCTGATTT+AGG - chr3.1:68646407-68646426 MS.gene79130:intron 20.0%
!!! GATTTTATTTTTGTGGATTA+AGG - chr3.1:68646599-68646618 MS.gene79130:CDS 20.0%
!!! GTGTTTTCTTATTTTGTTTT+TGG - chr3.1:68649083-68649102 MS.gene79130:intron 20.0%
!!! TCTGTATAATTTGAAATTCT+CGG + chr3.1:68648169-68648188 None:intergenic 20.0%
!!! TCTGTTTGATTTTATTTTTG+TGG - chr3.1:68646592-68646611 MS.gene79130:CDS 20.0%
!!! TTCAAATTTTAATTCCACAT+AGG - chr3.1:68649931-68649950 MS.gene79130:intron 20.0%
! AAAAACACACTCAAAATCTA+TGG - chr3.1:68645897-68645916 MS.gene79130:CDS 25.0%
! AAAAATGTAGTACAGGAATA+AGG + chr3.1:68651624-68651643 None:intergenic 25.0%
! AAAACACACTCAAAATCTAT+GGG - chr3.1:68645898-68645917 MS.gene79130:CDS 25.0%
! AAACTCAGTCGAAAAAATAT+TGG + chr3.1:68646221-68646240 None:intergenic 25.0%
! AAATAGCCTCTTAGAAAAAA+AGG + chr3.1:68649865-68649884 None:intergenic 25.0%
! AAGAAACAGATTAACAAAAG+GGG - chr3.1:68651958-68651977 MS.gene79130:intron 25.0%
! AATCACTAAAACAACAATTC+AGG + chr3.1:68651448-68651467 None:intergenic 25.0%
! AGAAAAAAAACTTACAGCAA+GGG + chr3.1:68647853-68647872 None:intergenic 25.0%
! AGAGAATGATAATTCTTCAA+TGG - chr3.1:68651411-68651430 MS.gene79130:CDS 25.0%
! AGTAAACTAACCCTTATTAT+GGG + chr3.1:68648512-68648531 None:intergenic 25.0%
! AGTCTTGCAAATACAATTAT+TGG - chr3.1:68649530-68649549 MS.gene79130:CDS 25.0%
! ATTGAAGAATTATCATTCTC+TGG + chr3.1:68651412-68651431 None:intergenic 25.0%
! CAAAGTAAACAAGAAAAAGA+AGG - chr3.1:68647383-68647402 MS.gene79130:CDS 25.0%
! CAAATTATACAGAAGATTCT+TGG - chr3.1:68648176-68648195 MS.gene79130:CDS 25.0%
! GAAGAAACAGATTAACAAAA+GGG - chr3.1:68651957-68651976 MS.gene79130:intron 25.0%
! GAGAAATTATTATGATCAAC+CGG - chr3.1:68650872-68650891 MS.gene79130:CDS 25.0%
! GATAATTCTTCAATGGAAAT+TGG - chr3.1:68651418-68651437 MS.gene79130:CDS 25.0%
! GTATTAGCATATTCTCATAT+TGG + chr3.1:68649208-68649227 None:intergenic 25.0%
! GTTTACTTTGTTCATTACAT+GGG + chr3.1:68647373-68647392 None:intergenic 25.0%
! TAAAATGACATATCTTGAAG+AGG - chr3.1:68646877-68646896 MS.gene79130:intron 25.0%
! TAGAAAAAAAACTTACAGCA+AGG + chr3.1:68647854-68647873 None:intergenic 25.0%
! TAGTAAACTAACCCTTATTA+TGG + chr3.1:68648513-68648532 None:intergenic 25.0%
! TAGTTTCAGAATCAAAATCA+GGG + chr3.1:68647476-68647495 None:intergenic 25.0%
! TCAGTTTATAACAATGGTTA+CGG - chr3.1:68646070-68646089 MS.gene79130:CDS 25.0%
! TGCAAATACAATTATTGGAA+TGG - chr3.1:68649535-68649554 MS.gene79130:CDS 25.0%
! TGTTTACTTTGTTCATTACA+TGG + chr3.1:68647374-68647393 None:intergenic 25.0%
! TTAGTTTCAGAATCAAAATC+AGG + chr3.1:68647477-68647496 None:intergenic 25.0%
! TTGAATCAGTTCTATGTATA+TGG + chr3.1:68649916-68649935 None:intergenic 25.0%
! TTTGCAATAACAACATATAC+AGG + chr3.1:68649642-68649661 None:intergenic 25.0%
!! AAGGTTTTCTCAAACAATAT+GGG - chr3.1:68646770-68646789 MS.gene79130:intron 25.0%
!! ATATGGTCATTTGATGATTA+TGG - chr3.1:68648241-68648260 MS.gene79130:CDS 25.0%
!! ATTTTAAACTTTTCCAAGTC+AGG + chr3.1:68646863-68646882 None:intergenic 25.0%
!! TTGAATTGGTTGTTGTTATT+AGG - chr3.1:68647123-68647142 MS.gene79130:intron 25.0%
!! TTGGAAGATAAAGTACTATA+AGG - chr3.1:68648789-68648808 MS.gene79130:CDS 25.0%
!! TTTTCTCCTTTTTTTCTAAG+AGG - chr3.1:68649856-68649875 MS.gene79130:CDS 25.0%
!!! AAAGATTTTAAGACAACTGA+TGG - chr3.1:68647714-68647733 MS.gene79130:intron 25.0%
!!! GCTTTTGTTTGTGTTTATTT+GGG - chr3.1:68646711-68646730 MS.gene79130:intron 25.0%
!!! TCAAATTTTGATATCCTTTC+AGG - chr3.1:68651499-68651518 MS.gene79130:CDS 25.0%
!!! TGATTTTGATTCTGAAACTA+AGG - chr3.1:68647476-68647495 MS.gene79130:CDS 25.0%
!!! TGCTTTTGTTTGTGTTTATT+TGG - chr3.1:68646710-68646729 MS.gene79130:intron 25.0%
!!! TTGTTTTTGGTGTTTGTATA+GGG - chr3.1:68649096-68649115 MS.gene79130:intron 25.0%
!!! TTTCTTTGTTTCAGGATTTT+AGG - chr3.1:68650373-68650392 MS.gene79130:intron 25.0%
!!! TTTGTTTTTGGTGTTTGTAT+AGG - chr3.1:68649095-68649114 MS.gene79130:intron 25.0%
AAAAAGAAGTCAAGTACCAT+AGG - chr3.1:68651988-68652007 MS.gene79130:intron 30.0%
AAAACTACTAGTGGAAGAAA+TGG - chr3.1:68646178-68646197 MS.gene79130:CDS 30.0%
AAAGTTGAGCTATTAGAATC+TGG + chr3.1:68648377-68648396 None:intergenic 30.0%
AAGACACATAACCGATAAAT+TGG + chr3.1:68649481-68649500 None:intergenic 30.0%
AAGAGCTAATATTGTTCTCA+AGG - chr3.1:68649345-68649364 MS.gene79130:intron 30.0%
AAGTGTGGAGAAAAAGAATA+GGG - chr3.1:68648752-68648771 MS.gene79130:CDS 30.0%
AAGTTGAGCTATTAGAATCT+GGG + chr3.1:68648376-68648395 None:intergenic 30.0%
AATGTGAAGAAAACTACTAG+TGG - chr3.1:68646169-68646188 MS.gene79130:CDS 30.0%
AATTTCCCTTGGATTATAGT+TGG + chr3.1:68650030-68650049 None:intergenic 30.0%
ACGAGTAACAATATTTAGCT+CGG + chr3.1:68649754-68649773 None:intergenic 30.0%
ACGGTTTCAGTTTATAACAA+TGG - chr3.1:68646064-68646083 MS.gene79130:CDS 30.0%
ACTCAAAGTTACAATCAATC+CGG - chr3.1:68646033-68646052 MS.gene79130:CDS 30.0%
AGAGCTAATATTGTTCTCAA+GGG - chr3.1:68649346-68649365 MS.gene79130:intron 30.0%
AGCACATGAAAGAATTCATA+TGG - chr3.1:68649172-68649191 MS.gene79130:CDS 30.0%
ATATGTACTATGTACTAGCA+TGG + chr3.1:68651837-68651856 None:intergenic 30.0%
ATCAATCTTCTCAATCCAAA+CGG - chr3.1:68649584-68649603 MS.gene79130:CDS 30.0%
ATCTAACCAAGCAAGTAAAA+AGG - chr3.1:68651306-68651325 MS.gene79130:CDS 30.0%
ATGCATGCAGAAATATATGT+TGG - chr3.1:68650783-68650802 MS.gene79130:CDS 30.0%
ATTAGGATTCATGCTATAGT+AGG - chr3.1:68647140-68647159 MS.gene79130:intron 30.0%
ATTTCAGCTCAAAAAATCCT+AGG + chr3.1:68646332-68646351 None:intergenic 30.0%
ATTTCCCTTGGATTATAGTT+GGG + chr3.1:68650029-68650048 None:intergenic 30.0%
CCATTTAACAAGAAAAGTAG+CGG - chr3.1:68652264-68652283 MS.gene79130:CDS 30.0%
CTTAAATACTTGAATGAGGA+GGG - chr3.1:68649804-68649823 MS.gene79130:intron 30.0%
GAGAAAACAAAATACCAGTT+TGG + chr3.1:68649843-68649862 None:intergenic 30.0%
GCAAATGTTATACTTTGTTC+TGG + chr3.1:68650564-68650583 None:intergenic 30.0%
GCACATGAAAGAATTCATAT+GGG - chr3.1:68649173-68649192 MS.gene79130:CDS 30.0%
GCTTCTTAAATACTTGAATG+AGG - chr3.1:68649800-68649819 MS.gene79130:intron 30.0%
GGAAGAAACAGATTAACAAA+AGG - chr3.1:68651956-68651975 MS.gene79130:intron 30.0%
GGTGTTTAAGAATACTAAGA+AGG - chr3.1:68651587-68651606 MS.gene79130:intron 30.0%
GGTTTACGAAAATGAAGAAA+TGG - chr3.1:68645919-68645938 MS.gene79130:CDS 30.0%
GTTCAACAAACATCTAACAT+TGG + chr3.1:68650057-68650076 None:intergenic 30.0%
GTTGATATATGATTCTGCTA+TGG - chr3.1:68646479-68646498 MS.gene79130:intron 30.0%
TAAAATCAAACAGATGTCTG+TGG + chr3.1:68646586-68646605 None:intergenic 30.0%
TATGTTCCTGAATTGTTCTT+TGG - chr3.1:68646127-68646146 MS.gene79130:CDS 30.0%
TATTATGATCAACCGGAAAA+AGG - chr3.1:68650879-68650898 MS.gene79130:CDS 30.0%
TCTATGGTCAAAGTTTCAAT+AGG + chr3.1:68651048-68651067 None:intergenic 30.0%
TCTTAAATACTTGAATGAGG+AGG - chr3.1:68649803-68649822 MS.gene79130:intron 30.0%
TGATGCAATTATAGACATTG+AGG - chr3.1:68650407-68650426 MS.gene79130:intron 30.0%
TGTACTTTGATATTGACAGA+CGG - chr3.1:68647813-68647832 MS.gene79130:CDS 30.0%
TTCTTGAATCCATAACTGAA+GGG - chr3.1:68650249-68650268 MS.gene79130:CDS 30.0%
TTTATATTAGGGGTTGTGAA+TGG - chr3.1:68650850-68650869 MS.gene79130:CDS 30.0%
TTTCTCGCCATATATACAAT+AGG - chr3.1:68650320-68650339 MS.gene79130:intron 30.0%
TTTCTTGAATCCATAACTGA+AGG - chr3.1:68650248-68650267 MS.gene79130:CDS 30.0%
TTTGTGATTACTGACAACTA+AGG - chr3.1:68649887-68649906 MS.gene79130:CDS 30.0%
! AAAATACCAGTTTGGTTCAA+TGG + chr3.1:68649835-68649854 None:intergenic 30.0%
! AGCAGAAAAGAATTTTCCTT+TGG + chr3.1:68649421-68649440 None:intergenic 30.0%
! AGGTTTTCTCAAACAATATG+GGG - chr3.1:68646771-68646790 MS.gene79130:intron 30.0%
! AGTTGAAACATCTGGAATAA+TGG - chr3.1:68647656-68647675 MS.gene79130:CDS 30.0%
! ATTGAGAAAAGTATGAAGCA+AGG - chr3.1:68650128-68650147 MS.gene79130:CDS 30.0%
! CTGCTAGGGTTTATAATTTT+TGG - chr3.1:68646433-68646452 MS.gene79130:intron 30.0%
! GAAGGTTTTCTCAAACAATA+TGG - chr3.1:68646769-68646788 MS.gene79130:intron 30.0%
! GTTGAATAAAATACCCCTTT+TGG - chr3.1:68648599-68648618 MS.gene79130:CDS 30.0%
! TCAATAATTCAGCCTTTTTC+CGG + chr3.1:68650894-68650913 None:intergenic 30.0%
! TTCAGGATTTTAGGCAAAAT+GGG - chr3.1:68650382-68650401 MS.gene79130:intron 30.0%
! TTGCTTCATACTTTTCTCAA+TGG + chr3.1:68650129-68650148 None:intergenic 30.0%
! TTTCAGGATTTTAGGCAAAA+TGG - chr3.1:68650381-68650400 MS.gene79130:intron 30.0%
! TTTGGGTATGTATTGATGAT+CGG - chr3.1:68646728-68646747 MS.gene79130:CDS 30.0%
! TTTTTGACCAAATGTTTGTC+TGG + chr3.1:68652166-68652185 None:intergenic 30.0%
!! AATGTGAAGTCTTTGAGATA+TGG - chr3.1:68648224-68648243 MS.gene79130:CDS 30.0%
!! ACTTTTATGTTTGGTTTCAG+TGG - chr3.1:68648307-68648326 MS.gene79130:CDS 30.0%
!! CTTTTATGTTTGGTTTCAGT+GGG - chr3.1:68648308-68648327 MS.gene79130:CDS 30.0%
!! GTGAAAGTTTTCTTTGTTTC+AGG - chr3.1:68650365-68650384 MS.gene79130:intron 30.0%
!! TATTTTTGTATGAAGATGGC+TGG - chr3.1:68648047-68648066 MS.gene79130:CDS 30.0%
!! TTGAAGAGTTTTATCCACTT+CGG - chr3.1:68650644-68650663 MS.gene79130:CDS 30.0%
!! TTTGTTATTGAGATTGCTGA+TGG - chr3.1:68646238-68646257 MS.gene79130:CDS 30.0%
!! TTTTTCAGTTGAACCTATGT+AGG + chr3.1:68645882-68645901 None:intergenic 30.0%
!!! GCTACATATTTGTTTTGGTT+AGG + chr3.1:68652435-68652454 None:intergenic 30.0%
!!! GCTGTTTTGACTTTTATGTT+TGG - chr3.1:68648298-68648317 MS.gene79130:CDS 30.0%
!!! TCTTCATTTGTTGTTTTACC+AGG - chr3.1:68647275-68647294 MS.gene79130:CDS 30.0%
!!! TGTTTTTGGTGTTTGTATAG+GGG - chr3.1:68649097-68649116 MS.gene79130:intron 30.0%
!!! TTTTGATTTATGATCCTCCT+AGG - chr3.1:68646312-68646331 MS.gene79130:CDS 30.0%
AAACAGATTAACAAAAGGGG+TGG - chr3.1:68651961-68651980 MS.gene79130:intron 35.0%
AAAGTTACAATCAATCCGGA+AGG - chr3.1:68646037-68646056 MS.gene79130:CDS 35.0%
AAATCAACAATAGCCGTTCA+AGG + chr3.1:68650813-68650832 None:intergenic 35.0%
AACAAAGTCTTTGTGGTTGA+AGG - chr3.1:68651137-68651156 MS.gene79130:CDS 35.0%
AACTCGATTGCTACAATCAA+GGG - chr3.1:68647309-68647328 MS.gene79130:CDS 35.0%
AACTTCTCAAGTATACTTCG+AGG - chr3.1:68647222-68647241 MS.gene79130:CDS 35.0%
AAGTTACAATCAATCCGGAA+GGG - chr3.1:68646038-68646057 MS.gene79130:CDS 35.0%
AATACAAGCTTACTCCTCTT+CGG - chr3.1:68649223-68649242 MS.gene79130:intron 35.0%
AATCACGGAACGACATAAAA+TGG + chr3.1:68646991-68647010 None:intergenic 35.0%
ACAAGAACCAAAGGAATGAT+GGG + chr3.1:68649963-68649982 None:intergenic 35.0%
ACAATTATTGGAATGGCACA+AGG - chr3.1:68649542-68649561 MS.gene79130:CDS 35.0%
ACATAGAGAAAAACGAACCT+TGG + chr3.1:68647064-68647083 None:intergenic 35.0%
ACATTCCCAACTATAATCCA+AGG - chr3.1:68650021-68650040 MS.gene79130:intron 35.0%
ACATTGGCAATAATTTCCCT+TGG + chr3.1:68650041-68650060 None:intergenic 35.0%
ACCCTTGTATCTAATGAGTT+TGG + chr3.1:68649315-68649334 None:intergenic 35.0%
ACTAGTGGAAGAAATGGTTA+TGG - chr3.1:68646184-68646203 MS.gene79130:CDS 35.0%
ACTATCTGATTCCAAACCTA+TGG + chr3.1:68652007-68652026 None:intergenic 35.0%
ACTGTTAAGGTTGAACTCAA+TGG - chr3.1:68646956-68646975 MS.gene79130:CDS 35.0%
AGAAGAAAGTGAGGAAAATG+AGG - chr3.1:68652235-68652254 MS.gene79130:CDS 35.0%
AGCCAAACTCATTAGATACA+AGG - chr3.1:68649310-68649329 MS.gene79130:intron 35.0%
AGTCATGTTACCTCAATGAA+AGG + chr3.1:68650293-68650312 None:intergenic 35.0%
AGTGGCATACTTACAGTTAT+AGG + chr3.1:68648854-68648873 None:intergenic 35.0%
AGTTGAACCTATGTAGGTAT+CGG + chr3.1:68645876-68645895 None:intergenic 35.0%
AGTTGAGCTATTAGAATCTG+GGG + chr3.1:68648375-68648394 None:intergenic 35.0%
AGTTTACCACTCCCATAATA+AGG - chr3.1:68648498-68648517 MS.gene79130:CDS 35.0%
ATGTGGATGTGATATCCAAA+AGG + chr3.1:68648617-68648636 None:intergenic 35.0%
ATGTTAACAAAACACCGAAG+AGG + chr3.1:68649240-68649259 None:intergenic 35.0%
ATTCAAAGTTATATGCAGCC+AGG + chr3.1:68651741-68651760 None:intergenic 35.0%
ATTTCTGCAGTTGAAACATC+TGG - chr3.1:68647648-68647667 MS.gene79130:CDS 35.0%
CAAAACAAATATGTAGCGAG+TGG - chr3.1:68652438-68652457 MS.gene79130:CDS 35.0%
CAAATTGAAGATTTGTCTCC+TGG - chr3.1:68652324-68652343 MS.gene79130:CDS 35.0%
CAGTTATAGGCGCAAATATA+TGG + chr3.1:68648841-68648860 None:intergenic 35.0%
CATTCCCAACTATAATCCAA+GGG - chr3.1:68650022-68650041 MS.gene79130:intron 35.0%
GAAAATCCATTGAACCAAAC+TGG - chr3.1:68649826-68649845 MS.gene79130:CDS 35.0%
GAACGACATAAAATGGATCA+AGG + chr3.1:68646984-68647003 None:intergenic 35.0%
GAAGAAAGTGAGGAAAATGA+GGG - chr3.1:68652236-68652255 MS.gene79130:CDS 35.0%
GAAGCTTATCATCATCTTCA+TGG + chr3.1:68649785-68649804 None:intergenic 35.0%
GAAGGACAAAAATGTAGTAC+AGG + chr3.1:68651631-68651650 None:intergenic 35.0%
GAAGTGTGGAGAAAAAGAAT+AGG - chr3.1:68648751-68648770 MS.gene79130:CDS 35.0%
GAATGACGATATACTATGCA+TGG - chr3.1:68648340-68648359 MS.gene79130:CDS 35.0%
GCATATAACTTTGAATCACC+TGG - chr3.1:68651745-68651764 MS.gene79130:intron 35.0%
GCCAAACTCATTAGATACAA+GGG - chr3.1:68649311-68649330 MS.gene79130:intron 35.0%
GCTGTATGCTGTATATTTGA+TGG - chr3.1:68648541-68648560 MS.gene79130:CDS 35.0%
GGATTATTATGAGAGGAGAA+AGG - chr3.1:68650669-68650688 MS.gene79130:intron 35.0%
GGTCAAAGTTTCAATAGGTA+AGG + chr3.1:68651043-68651062 None:intergenic 35.0%
GTAAACTCAACGATGAAAGA+TGG + chr3.1:68648485-68648504 None:intergenic 35.0%
GTCTTCTTAGTATTCTTTCG+TGG + chr3.1:68651376-68651395 None:intergenic 35.0%
GTGAATTGGTTGTGTTATGA+AGG - chr3.1:68646751-68646770 MS.gene79130:CDS 35.0%
GTTAGTTGTGCTTCATTCTT+TGG - chr3.1:68647568-68647587 MS.gene79130:intron 35.0%
GTTGAAGTTGCAAAACCAAA+AGG - chr3.1:68651558-68651577 MS.gene79130:intron 35.0%
GTTTACCACTCCCATAATAA+GGG - chr3.1:68648499-68648518 MS.gene79130:CDS 35.0%
TAACTCGATTGCTACAATCA+AGG - chr3.1:68647308-68647327 MS.gene79130:CDS 35.0%
TACATGGGCAATAATCTGAT+TGG + chr3.1:68647358-68647377 None:intergenic 35.0%
TAGCTCAACTTTATGTGTTC+AGG - chr3.1:68648385-68648404 MS.gene79130:intron 35.0%
TAGTACAGGAATAAGGCAAT+TGG + chr3.1:68651617-68651636 None:intergenic 35.0%
TATCAATAGCCCTTTGATGT+GGG + chr3.1:68648423-68648442 None:intergenic 35.0%
TATCATCATCTTCATGGAAG+AGG + chr3.1:68649779-68649798 None:intergenic 35.0%
TCAACCACAAAGACTTTGTT+GGG + chr3.1:68651137-68651156 None:intergenic 35.0%
TCAATGGAAATACACCATAG+TGG + chr3.1:68648094-68648113 None:intergenic 35.0%
TCAATTTGGTACTCGTAACT+TGG - chr3.1:68649607-68649626 MS.gene79130:CDS 35.0%
TCATAATAATCCATCCGAAG+TGG + chr3.1:68650661-68650680 None:intergenic 35.0%
TCTAATTCATCTTTCTCTGC+AGG - chr3.1:68648678-68648697 MS.gene79130:intron 35.0%
TGAAAAGGCTGAAAAGGAAA+AGG - chr3.1:68651089-68651108 MS.gene79130:intron 35.0%
TGATAATTCTGCATCCTCAT+TGG + chr3.1:68652484-68652503 None:intergenic 35.0%
TGCTGCATATGCAAATATAG+TGG + chr3.1:68648872-68648891 None:intergenic 35.0%
TGTAAGCGCTTAAACATGAT+TGG + chr3.1:68651653-68651672 None:intergenic 35.0%
TGTGGATGTGATATCCAAAA+GGG + chr3.1:68648616-68648635 None:intergenic 35.0%
TGTTCCAGAATCAATGCTAA+AGG - chr3.1:68647542-68647561 MS.gene79130:intron 35.0%
TTAAGACCATCAACCATAGA+GGG + chr3.1:68649392-68649411 None:intergenic 35.0%
TTAGTATTCTTTCGTGGTTG+TGG + chr3.1:68651370-68651389 None:intergenic 35.0%
TTATAGGCGCAAATATATGG+AGG + chr3.1:68648838-68648857 None:intergenic 35.0%
TTATCAATAGCCCTTTGATG+TGG + chr3.1:68648424-68648443 None:intergenic 35.0%
TTATGTGTTCAGGATCATGA+TGG - chr3.1:68648395-68648414 MS.gene79130:intron 35.0%
TTCAACCACAAAGACTTTGT+TGG + chr3.1:68651138-68651157 None:intergenic 35.0%
TTCATAATATGCCGATCATC+AGG - chr3.1:68651675-68651694 MS.gene79130:intron 35.0%
TTCATCACATGTATACGCAT+AGG + chr3.1:68648936-68648955 None:intergenic 35.0%
TTCATGCTATAGTAGGTGAT+AGG - chr3.1:68647147-68647166 MS.gene79130:intron 35.0%
TTGAGCAATTTGTCTCTCAA+TGG + chr3.1:68648110-68648129 None:intergenic 35.0%
TTTGTTGAACGAAGAGGAAA+TGG - chr3.1:68650067-68650086 MS.gene79130:CDS 35.0%
! AAAAGAATTTTCCTTTGGCC+AGG + chr3.1:68649416-68649435 None:intergenic 35.0%
! AAATGTATTTGGGACTAGCA+TGG + chr3.1:68649728-68649747 None:intergenic 35.0%
! ATACATGCTAGTACTGAAGT+TGG - chr3.1:68651889-68651908 MS.gene79130:intron 35.0%
! ATTTTCCTCACTTTCTTCTC+TGG + chr3.1:68652234-68652253 None:intergenic 35.0%
! ATTTTGTAGAAGTCGACTAG+AGG - chr3.1:68652505-68652524 MS.gene79130:CDS 35.0%
! CACTCGCTACATATTTGTTT+TGG + chr3.1:68652440-68652459 None:intergenic 35.0%
! CTATCTTTTGCATGTGTTTC+AGG - chr3.1:68651246-68651265 MS.gene79130:intron 35.0%
! CTGCTATGGTTTTTCATGTT+TGG - chr3.1:68646493-68646512 MS.gene79130:intron 35.0%
! GATTGTTTTCGAAGGAATGT+TGG + chr3.1:68645822-68645841 None:intergenic 35.0%
! GTCAATGGTAGTGAAGAAAT+TGG - chr3.1:68649981-68650000 MS.gene79130:intron 35.0%
! GTGCCTACATTTCTTTTCTT+GGG + chr3.1:68652144-68652163 None:intergenic 35.0%
! GTGGATTAAGGATCTTGTTA+TGG - chr3.1:68646611-68646630 MS.gene79130:CDS 35.0%
! GTTGATTTAGGATTCTGCTA+GGG - chr3.1:68646359-68646378 MS.gene79130:CDS 35.0%
! TACATGCTAGTACTGAAGTT+GGG - chr3.1:68651890-68651909 MS.gene79130:intron 35.0%
! TAGATGTTTGTTGAACGAAG+AGG - chr3.1:68650061-68650080 MS.gene79130:intron 35.0%
! TCAGGATTTTAGGCAAAATG+GGG - chr3.1:68650383-68650402 MS.gene79130:intron 35.0%
! TCGAAGATTTTGTAAAGTCC+AGG + chr3.1:68645968-68645987 None:intergenic 35.0%
! TCGTTTGAAGAAGTATAAGC+AGG - chr3.1:68646264-68646283 MS.gene79130:CDS 35.0%
! TCTGATTTAGGATTCTGCTA+GGG - chr3.1:68646419-68646438 MS.gene79130:intron 35.0%
! TCTTCTTCGATTGTTTTCGA+AGG + chr3.1:68645830-68645849 None:intergenic 35.0%
! TGCCTACATTTCTTTTCTTG+GGG + chr3.1:68652143-68652162 None:intergenic 35.0%
! TTCTGATTTAGGATTCTGCT+AGG - chr3.1:68646418-68646437 MS.gene79130:intron 35.0%
! TTGGGTATGTATTGATGATC+GGG - chr3.1:68646729-68646748 MS.gene79130:CDS 35.0%
! TTTAAGACCATCAACCATAG+AGG + chr3.1:68649393-68649412 None:intergenic 35.0%
! TTTGATGATTATGGCTGATC+AGG - chr3.1:68648250-68648269 MS.gene79130:CDS 35.0%
!! AAGGTTTGTTGTTGTAAGCA+TGG - chr3.1:68648808-68648827 MS.gene79130:CDS 35.0%
!! AGCTCGGTGTAAATGTATTT+GGG + chr3.1:68649738-68649757 None:intergenic 35.0%
!! ATTCCTTTGGTTCTTGTCAA+TGG - chr3.1:68649966-68649985 MS.gene79130:intron 35.0%
!! ATTCTCTGGCTCAACATTTT+TGG + chr3.1:68651398-68651417 None:intergenic 35.0%
!! GCATATCTCAAATTTTGGTG+TGG - chr3.1:68647904-68647923 MS.gene79130:CDS 35.0%
!! TAGCTCGGTGTAAATGTATT+TGG + chr3.1:68649739-68649758 None:intergenic 35.0%
!! TGTTGATTTAGGATTCTGCT+AGG - chr3.1:68646358-68646377 MS.gene79130:CDS 35.0%
!! TTCGGATGGATTATTATGAG+AGG - chr3.1:68650662-68650681 MS.gene79130:intron 35.0%
!! TTGATTGAGTTGAAGCAGAA+AGG - chr3.1:68650910-68650929 MS.gene79130:CDS 35.0%
!!! CCGCTACTTTTCTTGTTAAA+TGG + chr3.1:68652267-68652286 None:intergenic 35.0%
!!! TGAACGGCTATTGTTGATTT+TGG - chr3.1:68650813-68650832 MS.gene79130:CDS 35.0%
AAAATCTGCCCATGATAGGA+GGG + chr3.1:68647685-68647704 None:intergenic 40.0%
AACAGTGTGAGCTTTCACAT+TGG + chr3.1:68647412-68647431 None:intergenic 40.0%
AAGATCTTGTGACTCTAACC+TGG - chr3.1:68649023-68649042 MS.gene79130:CDS 40.0%
AATCAATCCGGAAGGGAATA+CGG - chr3.1:68646045-68646064 MS.gene79130:CDS 40.0%
AATGCAATGCTAGTGAGAAC+TGG - chr3.1:68646819-68646838 MS.gene79130:intron 40.0%
ACTAACCCTTATTATGGGAG+TGG + chr3.1:68648507-68648526 None:intergenic 40.0%
ACTTTGAGTGAATCCATCGA+CGG + chr3.1:68646022-68646041 None:intergenic 40.0%
AGACAAATTGCTCAATGTGC+GGG - chr3.1:68648115-68648134 MS.gene79130:CDS 40.0%
AGATTTACCTTTCCTCAGCA+TGG + chr3.1:68650944-68650963 None:intergenic 40.0%
AGCGCTTAAACATGATTGGA+AGG + chr3.1:68651649-68651668 None:intergenic 40.0%
AGGTGACCAAAGAACAATTC+AGG + chr3.1:68646136-68646155 None:intergenic 40.0%
ATATGTTGGCCAACCTTGAA+CGG - chr3.1:68650797-68650816 MS.gene79130:CDS 40.0%
ATGAAAGGATCGTTGACGTT+AGG + chr3.1:68650278-68650297 None:intergenic 40.0%
ATGCTATAGTAGGTGATAGG+TGG - chr3.1:68647150-68647169 MS.gene79130:CDS 40.0%
ATTTGCGTGAGTCTAAGTGA+TGG - chr3.1:68647176-68647195 MS.gene79130:CDS 40.0%
CAACCACAAAGACTTTGTTG+GGG + chr3.1:68651136-68651155 None:intergenic 40.0%
CAACCTTAACAGTCTTTCCA+AGG + chr3.1:68646949-68646968 None:intergenic 40.0%
CAAGGAGGCTATAAAGTCAA+TGG - chr3.1:68650146-68650165 MS.gene79130:CDS 40.0%
CAGGAACGTAGGAAATAGAA+CGG + chr3.1:68645949-68645968 None:intergenic 40.0%
CAGGTGAGACTTAAAGATCA+TGG - chr3.1:68648269-68648288 MS.gene79130:CDS 40.0%
CATTGAGGTCAAAATGAAGC+CGG - chr3.1:68650422-68650441 MS.gene79130:intron 40.0%
CCACACTTCATATTCTGACA+TGG + chr3.1:68648740-68648759 None:intergenic 40.0%
CCAGAATCAATGCTAAAGGA+TGG - chr3.1:68647546-68647565 MS.gene79130:intron 40.0%
CCATGTCAGAATATGAAGTG+TGG - chr3.1:68648737-68648756 MS.gene79130:CDS 40.0%
CGTTAAAATCTGCCCATGAT+AGG + chr3.1:68647689-68647708 None:intergenic 40.0%
CTACCATTGACAAGAACCAA+AGG + chr3.1:68649972-68649991 None:intergenic 40.0%
CTCAATCCAAACGGTCAATT+TGG - chr3.1:68649593-68649612 MS.gene79130:CDS 40.0%
CTCTCCTATAGCAAAGAATG+AGG - chr3.1:68652359-68652378 MS.gene79130:CDS 40.0%
GAAGTCAAGTACCATAGGTT+TGG - chr3.1:68651993-68652012 MS.gene79130:intron 40.0%
GAAGTTGCAAAACCAAAAGG+AGG - chr3.1:68651561-68651580 MS.gene79130:intron 40.0%
GAATCACAGAGCTTCCTATA+CGG - chr3.1:68650201-68650220 MS.gene79130:CDS 40.0%
GACAAGAACCAAAGGAATGA+TGG + chr3.1:68649964-68649983 None:intergenic 40.0%
GAGACAAATTGCTCAATGTG+CGG - chr3.1:68648114-68648133 MS.gene79130:CDS 40.0%
GAGTGACAATGATTCCAATG+AGG - chr3.1:68652467-68652486 MS.gene79130:CDS 40.0%
GATGGAACTTTAAGCAGTGA+TGG + chr3.1:68648467-68648486 None:intergenic 40.0%
GATTTACCTTTCCTCAGCAT+GGG + chr3.1:68650943-68650962 None:intergenic 40.0%
GCAAATGATGAGAGTTCAGA+AGG - chr3.1:68650985-68651004 MS.gene79130:CDS 40.0%
GCTAGATGAAAAGGCTGAAA+AGG - chr3.1:68651083-68651102 MS.gene79130:intron 40.0%
GCTTCTTCATCAAAGCAACA+AGG + chr3.1:68646904-68646923 None:intergenic 40.0%
GGAAGAGGTCAACATAATCA+CGG + chr3.1:68647006-68647025 None:intergenic 40.0%
GGTAGTGAAGAAATTGGAAC+AGG - chr3.1:68649987-68650006 MS.gene79130:intron 40.0%
GTACATACCCATCATTCCTT+TGG - chr3.1:68649953-68649972 MS.gene79130:intron 40.0%
GTGAAGAAATTGGAACAGGT+TGG - chr3.1:68649991-68650010 MS.gene79130:intron 40.0%
GTGGATGTGATATCCAAAAG+GGG + chr3.1:68648615-68648634 None:intergenic 40.0%
GTTCTCACTAGCATTGCATT+CGG + chr3.1:68646819-68646838 None:intergenic 40.0%
GTTGAACCTATGTAGGTATC+GGG + chr3.1:68645875-68645894 None:intergenic 40.0%
TAAAATCTGCCCATGATAGG+AGG + chr3.1:68647686-68647705 None:intergenic 40.0%
TAGGCTGCAACAACAAAGAA+TGG + chr3.1:68649271-68649290 None:intergenic 40.0%
TAGGGAACAATGCAAACTGT+TGG - chr3.1:68648770-68648789 MS.gene79130:CDS 40.0%
TATTGGATATTCCCTCTCCA+GGG - chr3.1:68649693-68649712 MS.gene79130:intron 40.0%
TCAGCTCAAAAAATCCTAGG+AGG + chr3.1:68646329-68646348 None:intergenic 40.0%
TCCTATAGCAAAGAATGAGG+TGG - chr3.1:68652362-68652381 MS.gene79130:CDS 40.0%
TCTATCTATTCAAGAACGCC+TGG - chr3.1:68651720-68651739 MS.gene79130:intron 40.0%
TGAATCACCTGGTGAAAAGT+CGG - chr3.1:68651756-68651775 MS.gene79130:intron 40.0%
TGCAAAACCAAAAGGAGGAT+CGG - chr3.1:68651566-68651585 MS.gene79130:intron 40.0%
TGCTATAGTAGGTGATAGGT+GGG - chr3.1:68647151-68647170 MS.gene79130:CDS 40.0%
TGGTTTCAGTGGGATATGAT+GGG - chr3.1:68648318-68648337 MS.gene79130:CDS 40.0%
TTATTGGATATTCCCTCTCC+AGG - chr3.1:68649692-68649711 MS.gene79130:intron 40.0%
TTGGTTTCAGTGGGATATGA+TGG - chr3.1:68648317-68648336 MS.gene79130:CDS 40.0%
TTTGTAAAGTCCAGGAACGT+AGG + chr3.1:68645960-68645979 None:intergenic 40.0%
! AAAGTACTCTCTCCCTTCTT+GGG + chr3.1:68649139-68649158 None:intergenic 40.0%
! ACCACCTCATTCTTTGCTAT+AGG + chr3.1:68652366-68652385 None:intergenic 40.0%
! AGGTTTTGCAGCAAAACCAT+TGG + chr3.1:68651335-68651354 None:intergenic 40.0%
! CAACATGCATCTTTTCGATG+CGG - chr3.1:68650512-68650531 MS.gene79130:CDS 40.0%
! CTTTTCCAAGTCAGGCTTAA+AGG + chr3.1:68646855-68646874 None:intergenic 40.0%
! GAGAAAAGTATGAAGCAAGG+AGG - chr3.1:68650131-68650150 MS.gene79130:CDS 40.0%
! GCCTACATTTCTTTTCTTGG+GGG + chr3.1:68652142-68652161 None:intergenic 40.0%
! GGTGCCTACATTTCTTTTCT+TGG + chr3.1:68652145-68652164 None:intergenic 40.0%
! GTATTGATGATCGGGTGAAT+TGG - chr3.1:68646737-68646756 MS.gene79130:CDS 40.0%
! TACATTTCTTTTCTTGGGGG+CGG + chr3.1:68652139-68652158 None:intergenic 40.0%
! TGAAAAGGAAAAGGAGCATG+AGG - chr3.1:68651098-68651117 MS.gene79130:intron 40.0%
! TGAGTTTGGCTTCAAGATCA+TGG + chr3.1:68649301-68649320 None:intergenic 40.0%
! TTAAACACCGATCCTCCTTT+TGG + chr3.1:68651576-68651595 None:intergenic 40.0%
! TTAATCTGTTTCTTCCCAGC+AGG + chr3.1:68651952-68651971 None:intergenic 40.0%
! TTGGTGTTTGTATAGGGGTT+GGG - chr3.1:68649102-68649121 MS.gene79130:intron 40.0%
! TTTGATGAAGAAGCGTGTGT+TGG - chr3.1:68646910-68646929 MS.gene79130:CDS 40.0%
!! AAAGGAGCATGAGGTTTTGA+TGG - chr3.1:68651107-68651126 MS.gene79130:intron 40.0%
!! AAGGAGCATGAGGTTTTGAT+GGG - chr3.1:68651108-68651127 MS.gene79130:intron 40.0%
!! ACGACTAGTCAAGCTAGTTT+TGG - chr3.1:68647507-68647526 MS.gene79130:CDS 40.0%
!! AGAGTTTTATCCACTTCGGA+TGG - chr3.1:68650648-68650667 MS.gene79130:CDS 40.0%
!! ATGATGGGTATGTACCTATG+TGG + chr3.1:68649948-68649967 None:intergenic 40.0%
!! ATGGTTGATGGTCTTAAACC+TGG - chr3.1:68649395-68649414 MS.gene79130:intron 40.0%
!! CCATCCTTTAGCATTGATTC+TGG + chr3.1:68647549-68647568 None:intergenic 40.0%
!! TTTGGTGTTTGTATAGGGGT+TGG - chr3.1:68649101-68649120 MS.gene79130:intron 40.0%
AAAGTAGCTTCGGTCATGCA+AGG - chr3.1:68650447-68650466 MS.gene79130:intron 45.0%
AAGGCTGCCCTAGTTAAGAA+GGG - chr3.1:68652072-68652091 MS.gene79130:CDS 45.0%
AAGTGATGGCCAGTTTCAAC+AGG - chr3.1:68647190-68647209 MS.gene79130:CDS 45.0%
AATGGACACCCTCCTATCAT+GGG - chr3.1:68647674-68647693 MS.gene79130:CDS 45.0%
AATGGTTACGGTGTTCCAGT+AGG - chr3.1:68646082-68646101 MS.gene79130:CDS 45.0%
ACCATCAACCATAGAGGGAA+TGG + chr3.1:68649387-68649406 None:intergenic 45.0%
ACTGAAACCGTATTCCCTTC+CGG + chr3.1:68646055-68646074 None:intergenic 45.0%
AGAAAAACGAACCTTGGCAG+GGG + chr3.1:68647058-68647077 None:intergenic 45.0%
AGAGAAAAACGAACCTTGGC+AGG + chr3.1:68647060-68647079 None:intergenic 45.0%
AGATAGCAAAGAGGCAGAAG+AGG - chr3.1:68651273-68651292 MS.gene79130:CDS 45.0%
AGTAGGGCTTCATAAGGAAG+AGG - chr3.1:68646099-68646118 MS.gene79130:CDS 45.0%
ATGATGGCTCCCACATCAAA+GGG - chr3.1:68648411-68648430 MS.gene79130:intron 45.0%
ATGGTTACGGTGTTCCAGTA+GGG - chr3.1:68646083-68646102 MS.gene79130:CDS 45.0%
CAACAATAGCCGTTCAAGGT+TGG + chr3.1:68650809-68650828 None:intergenic 45.0%
CACAAAAATGGAGGTTCTCC+AGG + chr3.1:68649044-68649063 None:intergenic 45.0%
CACTAGTCACCTGTTGAAAC+TGG + chr3.1:68647202-68647221 None:intergenic 45.0%
CAGCTTCTGCACACTTTCTA+TGG + chr3.1:68651064-68651083 None:intergenic 45.0%
CGACTTCGAAGTACAACAGA+AGG - chr3.1:68652053-68652072 MS.gene79130:CDS 45.0%
CGAGAAAGTTCACACCTGAA+AGG + chr3.1:68651516-68651535 None:intergenic 45.0%
CGAGTACCAAATTGACCGTT+TGG + chr3.1:68649602-68649621 None:intergenic 45.0%
CGATTGCTACAATCAAGGGT+GGG - chr3.1:68647313-68647332 MS.gene79130:CDS 45.0%
CGTCAACGATCCTTTCATTG+AGG - chr3.1:68650280-68650299 MS.gene79130:intron 45.0%
CGTTCTATTTCCTACGTTCC+TGG - chr3.1:68645947-68645966 MS.gene79130:CDS 45.0%
CTGATGGAACAAAGATCCAG+AGG - chr3.1:68647730-68647749 MS.gene79130:intron 45.0%
CTGCAGAACCACAAGTTGTA+GGG - chr3.1:68650962-68650981 MS.gene79130:CDS 45.0%
CTGCAGGCTTCTCATTCAAA+CGG - chr3.1:68648694-68648713 MS.gene79130:intron 45.0%
CTTCACCAGAGAAGAAAGTG+AGG - chr3.1:68652226-68652245 MS.gene79130:CDS 45.0%
GAACCCCAACAAAGTCTTTG+TGG - chr3.1:68651130-68651149 MS.gene79130:CDS 45.0%
GAATCACCTGGTGAAAAGTC+GGG - chr3.1:68651757-68651776 MS.gene79130:intron 45.0%
GAGAAAAACGAACCTTGGCA+GGG + chr3.1:68647059-68647078 None:intergenic 45.0%
GCAAGTAAAAAGGCAGCCAA+TGG - chr3.1:68651316-68651335 MS.gene79130:CDS 45.0%
GCAGAAGCTGCTAGATGAAA+AGG - chr3.1:68651074-68651093 MS.gene79130:intron 45.0%
GCATTGCATTCGGTTATCAC+TGG + chr3.1:68646809-68646828 None:intergenic 45.0%
GCCCCCAAGAAAAGAAATGT+AGG - chr3.1:68652138-68652157 MS.gene79130:CDS 45.0%
GGTAACCTTTAAGCCTGACT+TGG - chr3.1:68646847-68646866 MS.gene79130:intron 45.0%
GTACAAGCACTTCCCAAGAA+GGG - chr3.1:68649124-68649143 MS.gene79130:intron 45.0%
GTAGGCACCAGACAAACATT+TGG - chr3.1:68652156-68652175 MS.gene79130:CDS 45.0%
GTATTCTTTCGTGGTTGTGG+CGG + chr3.1:68651367-68651386 None:intergenic 45.0%
GTCATCAGCTTCCTGATGAT+CGG + chr3.1:68651689-68651708 None:intergenic 45.0%
GTGCCTTGGAAAGACTGTTA+AGG - chr3.1:68646943-68646962 MS.gene79130:CDS 45.0%
TACGGGTTCTTCACTTTCCA+TGG + chr3.1:68651929-68651948 None:intergenic 45.0%
TAGCGGTTCTACACTGTACA+GGG - chr3.1:68652281-68652300 MS.gene79130:CDS 45.0%
TCAAGATCATGGCAAGTGCT+AGG + chr3.1:68649290-68649309 None:intergenic 45.0%
TCAGGAGCTAGATAGCAAAG+AGG - chr3.1:68651264-68651283 MS.gene79130:intron 45.0%
TCATTTGCCCCTACAACTTG+TGG + chr3.1:68650973-68650992 None:intergenic 45.0%
TCCATTCCCTCTATGGTTGA+TGG - chr3.1:68649383-68649402 MS.gene79130:intron 45.0%
TCGAGTTAACAAAGCTGACC+TGG + chr3.1:68647296-68647315 None:intergenic 45.0%
TCGATTGCTACAATCAAGGG+TGG - chr3.1:68647312-68647331 MS.gene79130:CDS 45.0%
TCTCAGCACATTTCAGGAAG+AGG + chr3.1:68647021-68647040 None:intergenic 45.0%
TCTCCCTCCCTTCTTAACTA+GGG + chr3.1:68652082-68652101 None:intergenic 45.0%
TCTGCAGAACCACAAGTTGT+AGG - chr3.1:68650961-68650980 MS.gene79130:CDS 45.0%
TCTTCAGTCCACTTCCGTAT+AGG + chr3.1:68650218-68650237 None:intergenic 45.0%
TCTTCCTTATGAAGCCCTAC+TGG + chr3.1:68646100-68646119 None:intergenic 45.0%
TGCAGAACCACAAGTTGTAG+GGG - chr3.1:68650963-68650982 MS.gene79130:CDS 45.0%
TGCAGGCTTCTCATTCAAAC+GGG - chr3.1:68648695-68648714 MS.gene79130:intron 45.0%
TGCTAGTGAGAACTGGACAA+AGG - chr3.1:68646826-68646845 MS.gene79130:intron 45.0%
TGCTGCTCAAAATGCCAAGA+AGG - chr3.1:68652107-68652126 MS.gene79130:CDS 45.0%
TGGACTTCTCAGCACATTTC+AGG + chr3.1:68647027-68647046 None:intergenic 45.0%
TGTTCCAGTAGGGCTTCATA+AGG - chr3.1:68646093-68646112 MS.gene79130:CDS 45.0%
TTCTCCCTCCCTTCTTAACT+AGG + chr3.1:68652083-68652102 None:intergenic 45.0%
TTCTTCACTTTCCATGGCTG+TGG + chr3.1:68651923-68651942 None:intergenic 45.0%
TTGCAAGACTTTGCTCACCA+TGG + chr3.1:68649520-68649539 None:intergenic 45.0%
TTGCATTCTGCTTACCACCA+TGG - chr3.1:68649500-68649519 MS.gene79130:intron 45.0%
TTTACTCCCATGCTGAGGAA+AGG - chr3.1:68650934-68650953 MS.gene79130:CDS 45.0%
! AAATGGTGCCAATGGATCCA+TGG - chr3.1:68650084-68650103 MS.gene79130:CDS 45.0%
! AAGGTTTTACTCCCATGCTG+AGG - chr3.1:68650929-68650948 MS.gene79130:CDS 45.0%
! ATGACCGAAGCTACTTTGTC+CGG + chr3.1:68650444-68650463 None:intergenic 45.0%
! ATGCATCTTTTCGATGCGGA+GGG - chr3.1:68650516-68650535 MS.gene79130:CDS 45.0%
! ATGGTCTTAAACCTGGCCAA+AGG - chr3.1:68649402-68649421 MS.gene79130:intron 45.0%
! GAAGAAGCGTGTGTTGGATA+TGG - chr3.1:68646916-68646935 MS.gene79130:CDS 45.0%
! TAATGGACACCCTCCTATCA+TGG - chr3.1:68647673-68647692 MS.gene79130:CDS 45.0%
! TGGCTGCCTTTTTACTTGCT+TGG + chr3.1:68651315-68651334 None:intergenic 45.0%
! TTCTTGGCATTTTGAGCAGC+AGG + chr3.1:68652108-68652127 None:intergenic 45.0%
!! AACCTATGTAGGTATCGGGA+TGG + chr3.1:68645871-68645890 None:intergenic 45.0%
!! GAAAGTACTCTCTCCCTTCT+TGG + chr3.1:68649140-68649159 None:intergenic 45.0%
!! GGAATGGCACAAGGTTTTGT+TGG - chr3.1:68649551-68649570 MS.gene79130:CDS 45.0%
!!! AGTCGGGAGGTGAGTTTTTT+TGG - chr3.1:68651773-68651792 MS.gene79130:intron 45.0%
AAGCGTGTGTTGGATATGGC+AGG - chr3.1:68646920-68646939 MS.gene79130:CDS 50.0%
ACAAAGATCCAGAGGATCCG+TGG - chr3.1:68647738-68647757 MS.gene79130:intron 50.0%
ACTGTACAGGGCTGCTAACA+AGG - chr3.1:68652293-68652312 MS.gene79130:CDS 50.0%
AGAGGATCCGTGGGATTGTA+AGG - chr3.1:68647748-68647767 MS.gene79130:intron 50.0%
AGAGTTCAGAAGGAGCAGCA+TGG - chr3.1:68650995-68651014 MS.gene79130:CDS 50.0%
AGCAAAGAGGCAGAAGAGGA+TGG - chr3.1:68651277-68651296 MS.gene79130:CDS 50.0%
AGCGTGTGTTGGATATGGCA+GGG - chr3.1:68646921-68646940 MS.gene79130:CDS 50.0%
AGTTCAGAAGGAGCAGCATG+GGG - chr3.1:68650997-68651016 MS.gene79130:CDS 50.0%
ATCCATCGACGGATCTCTCT+TGG + chr3.1:68646011-68646030 None:intergenic 50.0%
ATGCCAATGATGCTGGTGGA+AGG - chr3.1:68647778-68647797 MS.gene79130:CDS 50.0%
CAAAGATCCAGAGGATCCGT+GGG - chr3.1:68647739-68647758 MS.gene79130:intron 50.0%
CAAGACTTTGCTCACCATGG+TGG + chr3.1:68649517-68649536 None:intergenic 50.0%
CAGAGCTTCCTATACGGAAG+TGG - chr3.1:68650207-68650226 MS.gene79130:CDS 50.0%
CATGATGGCTCCCACATCAA+AGG - chr3.1:68648410-68648429 MS.gene79130:intron 50.0%
CCTCAAGCCTTACAATCCCA+CGG + chr3.1:68647758-68647777 None:intergenic 50.0%
CTCCATCCCGATACCTACAT+AGG - chr3.1:68645866-68645885 MS.gene79130:CDS 50.0%
CTGCCCTAGTTAAGAAGGGA+GGG - chr3.1:68652076-68652095 MS.gene79130:CDS 50.0%
CTTGAGGATGCCAATGATGC+TGG - chr3.1:68647771-68647790 MS.gene79130:CDS 50.0%
GAAGCCGGACAAAGTAGCTT+CGG - chr3.1:68650437-68650456 MS.gene79130:intron 50.0%
GAAGGCTGCCCTAGTTAAGA+AGG - chr3.1:68652071-68652090 MS.gene79130:CDS 50.0%
GAGAGAGAGAGAGAGAGATG+TGG + chr3.1:68648634-68648653 None:intergenic 50.0%
GAGTTCAGAAGGAGCAGCAT+GGG - chr3.1:68650996-68651015 MS.gene79130:CDS 50.0%
GGAGAGTTAGAAGCAGAACC+AGG + chr3.1:68652345-68652364 None:intergenic 50.0%
GGTACAAGCACTTCCCAAGA+AGG - chr3.1:68649123-68649142 MS.gene79130:intron 50.0%
GTAGCGGTTCTACACTGTAC+AGG - chr3.1:68652280-68652299 MS.gene79130:CDS 50.0%
GTTAGGCGTCCCTTCAGTTA+TGG + chr3.1:68650261-68650280 None:intergenic 50.0%
GTTCCTTCCACCAGCATCAT+TGG + chr3.1:68647784-68647803 None:intergenic 50.0%
TAGCATGGTCTTTACCACCC+TGG + chr3.1:68649713-68649732 None:intergenic 50.0%
TCTATGTGCCAGTGCATGTG+TGG - chr3.1:68647077-68647096 MS.gene79130:intron 50.0%
TGTTTCTTCCCAGCAGGTAC+GGG + chr3.1:68651946-68651965 None:intergenic 50.0%
TTACAATCCCACGGATCCTC+TGG + chr3.1:68647749-68647768 None:intergenic 50.0%
! CATGCATCTTTTCGATGCGG+AGG - chr3.1:68650515-68650534 MS.gene79130:CDS 50.0%
! CGAAGAGGAAATGGTGCCAA+TGG - chr3.1:68650076-68650095 MS.gene79130:CDS 50.0%
! CTGTTTCTTCCCAGCAGGTA+CGG + chr3.1:68651947-68651966 None:intergenic 50.0%
! TGGGTTTTCTTCCACAGCCA+TGG - chr3.1:68651909-68651928 MS.gene79130:intron 50.0%
!! CTATGTAGGTATCGGGATGG+AGG + chr3.1:68645868-68645887 None:intergenic 50.0%
!! TGGTTAGGATTAGCCCTGTG+AGG + chr3.1:68652420-68652439 None:intergenic 50.0%
AGATTGCACCACACCCAGCA+AGG - chr3.1:68652388-68652407 MS.gene79130:CDS 55.0%
AGCAAGGGCTAAGCCTCACA+GGG - chr3.1:68652404-68652423 MS.gene79130:CDS 55.0%
AGTGAAGAACCCGTACCTGC+TGG - chr3.1:68651934-68651953 MS.gene79130:intron 55.0%
CCAGAGGTCCATTCCCTCTA+TGG - chr3.1:68649376-68649395 MS.gene79130:intron 55.0%
CCATAGAGGGAATGGACCTC+TGG + chr3.1:68649379-68649398 None:intergenic 55.0%
CCGTGGGATTGTAAGGCTTG+AGG - chr3.1:68647755-68647774 MS.gene79130:intron 55.0%
CGGGAAAACCACACATGCAC+TGG + chr3.1:68647088-68647107 None:intergenic 55.0%
GAGGATGCCAATGATGCTGG+TGG - chr3.1:68647774-68647793 MS.gene79130:CDS 55.0%
GATCTCTCTTGGCAGCGTCA+AGG + chr3.1:68646000-68646019 None:intergenic 55.0%
GATTGCACCACACCCAGCAA+GGG - chr3.1:68652389-68652408 MS.gene79130:CDS 55.0%
GCTGCCCTAGTTAAGAAGGG+AGG - chr3.1:68652075-68652094 MS.gene79130:CDS 55.0%
GGTCTTTACCACCCTGGAGA+GGG + chr3.1:68649707-68649726 None:intergenic 55.0%
GTGAAGAACCCGTACCTGCT+GGG - chr3.1:68651935-68651954 MS.gene79130:intron 55.0%
GTTGTGGGTCGAGACCACTA+TGG - chr3.1:68648077-68648096 MS.gene79130:CDS 55.0%
TCACCTGGTGAAAAGTCGGG+AGG - chr3.1:68651760-68651779 MS.gene79130:intron 55.0%
TCTCAAGGGCAGAACTCCAG+AGG - chr3.1:68649360-68649379 MS.gene79130:intron 55.0%
TGCCAAGAGAGATCCGTCGA+TGG - chr3.1:68646006-68646025 MS.gene79130:CDS 55.0%
TGGATATTCCCTCTCCAGGG+TGG - chr3.1:68649696-68649715 MS.gene79130:intron 55.0%
TGGTCTTTACCACCCTGGAG+AGG + chr3.1:68649708-68649727 None:intergenic 55.0%
TGTGAGGCTTAGCCCTTGCT+GGG + chr3.1:68652404-68652423 None:intergenic 55.0%
! TCACCTCCCGACTTTTCACC+AGG + chr3.1:68651766-68651785 None:intergenic 55.0%
! TTGGATATGGCAGGGTGCCT+TGG - chr3.1:68646929-68646948 MS.gene79130:CDS 55.0%
!! ATGGCTGGCCTCTCTGTTGT+GGG - chr3.1:68648062-68648081 MS.gene79130:CDS 55.0%
CAGCAAGGGCTAAGCCTCAC+AGG - chr3.1:68652403-68652422 MS.gene79130:CDS 60.0%
CTGTGAGGCTTAGCCCTTGC+TGG + chr3.1:68652405-68652424 None:intergenic 60.0%
GGTCTCGACCCACAACAGAG+AGG + chr3.1:68648073-68648092 None:intergenic 60.0%
GGTTGTGGCGGCTTCATTGC+AGG + chr3.1:68651355-68651374 None:intergenic 60.0%
!! GATGGCTGGCCTCTCTGTTG+TGG - chr3.1:68648061-68648080 MS.gene79130:CDS 60.0%
CCAAACCTGCACCCCTGCCA+AGG - chr3.1:68647044-68647063 MS.gene79130:CDS 65.0%
GGCTTAGCCCTTGCTGGGTG+TGG + chr3.1:68652399-68652418 None:intergenic 65.0%
! ACGAACCTTGGCAGGGGTGC+AGG + chr3.1:68647052-68647071 None:intergenic 65.0%
! CCTTGGCAGGGGTGCAGGTT+TGG + chr3.1:68647047-68647066 None:intergenic 65.0%
GGGGGCGGCAGATGCCTTCT+TGG + chr3.1:68652124-68652143 None:intergenic 70.0%


Chromosome Type Strat End Strand Name
chr3.1 gene 68645812 68652524 68645812 ID=MS.gene79130
chr3.1 mRNA 68645812 68652524 68645812 ID=MS.gene79130.t1;Parent=MS.gene79130
chr3.1 exon 68652051 68652524 68652051 ID=MS.gene79130.t1.exon1;Parent=MS.gene79130.t1
chr3.1 CDS 68652051 68652524 68652051 ID=cds.MS.gene79130.t1;Parent=MS.gene79130.t1
chr3.1 exon 68651271 68651563 68651271 ID=MS.gene79130.t1.exon2;Parent=MS.gene79130.t1
chr3.1 CDS 68651271 68651563 68651271 ID=cds.MS.gene79130.t1;Parent=MS.gene79130.t1
chr3.1 exon 68651125 68651191 68651125 ID=MS.gene79130.t1.exon3;Parent=MS.gene79130.t1
chr3.1 CDS 68651125 68651191 68651125 ID=cds.MS.gene79130.t1;Parent=MS.gene79130.t1
chr3.1 exon 68650769 68651039 68650769 ID=MS.gene79130.t1.exon4;Parent=MS.gene79130.t1
chr3.1 CDS 68650769 68651039 68650769 ID=cds.MS.gene79130.t1;Parent=MS.gene79130.t1
chr3.1 exon 68650479 68650678 68650479 ID=MS.gene79130.t1.exon5;Parent=MS.gene79130.t1
chr3.1 CDS 68650479 68650678 68650479 ID=cds.MS.gene79130.t1;Parent=MS.gene79130.t1
chr3.1 exon 68650065 68650274 68650065 ID=MS.gene79130.t1.exon6;Parent=MS.gene79130.t1
chr3.1 CDS 68650065 68650274 68650065 ID=cds.MS.gene79130.t1;Parent=MS.gene79130.t1
chr3.1 exon 68649816 68649929 68649816 ID=MS.gene79130.t1.exon7;Parent=MS.gene79130.t1
chr3.1 CDS 68649816 68649929 68649816 ID=cds.MS.gene79130.t1;Parent=MS.gene79130.t1
chr3.1 exon 68649526 68649636 68649526 ID=MS.gene79130.t1.exon8;Parent=MS.gene79130.t1
chr3.1 CDS 68649526 68649636 68649526 ID=cds.MS.gene79130.t1;Parent=MS.gene79130.t1
chr3.1 exon 68649142 68649219 68649142 ID=MS.gene79130.t1.exon9;Parent=MS.gene79130.t1
chr3.1 CDS 68649142 68649219 68649142 ID=cds.MS.gene79130.t1;Parent=MS.gene79130.t1
chr3.1 exon 68648708 68649049 68648708 ID=MS.gene79130.t1.exon10;Parent=MS.gene79130.t1
chr3.1 CDS 68648708 68649049 68648708 ID=cds.MS.gene79130.t1;Parent=MS.gene79130.t1
chr3.1 exon 68648489 68648622 68648489 ID=MS.gene79130.t1.exon11;Parent=MS.gene79130.t1
chr3.1 CDS 68648489 68648622 68648489 ID=cds.MS.gene79130.t1;Parent=MS.gene79130.t1
chr3.1 exon 68648035 68648383 68648035 ID=MS.gene79130.t1.exon12;Parent=MS.gene79130.t1
chr3.1 CDS 68648035 68648383 68648035 ID=cds.MS.gene79130.t1;Parent=MS.gene79130.t1
chr3.1 exon 68647766 68647949 68647766 ID=MS.gene79130.t1.exon13;Parent=MS.gene79130.t1
chr3.1 CDS 68647766 68647949 68647766 ID=cds.MS.gene79130.t1;Parent=MS.gene79130.t1
chr3.1 exon 68647646 68647695 68647646 ID=MS.gene79130.t1.exon14;Parent=MS.gene79130.t1
chr3.1 CDS 68647646 68647695 68647646 ID=cds.MS.gene79130.t1;Parent=MS.gene79130.t1
chr3.1 exon 68647148 68647543 68647148 ID=MS.gene79130.t1.exon15;Parent=MS.gene79130.t1
chr3.1 CDS 68647148 68647543 68647148 ID=cds.MS.gene79130.t1;Parent=MS.gene79130.t1
chr3.1 exon 68646897 68647068 68646897 ID=MS.gene79130.t1.exon16;Parent=MS.gene79130.t1
chr3.1 CDS 68646897 68647068 68646897 ID=cds.MS.gene79130.t1;Parent=MS.gene79130.t1
chr3.1 exon 68646728 68646786 68646728 ID=MS.gene79130.t1.exon17;Parent=MS.gene79130.t1
chr3.1 CDS 68646728 68646786 68646728 ID=cds.MS.gene79130.t1;Parent=MS.gene79130.t1
chr3.1 exon 68646555 68646639 68646555 ID=MS.gene79130.t1.exon18;Parent=MS.gene79130.t1
chr3.1 CDS 68646555 68646639 68646555 ID=cds.MS.gene79130.t1;Parent=MS.gene79130.t1
chr3.1 exon 68645812 68646410 68645812 ID=MS.gene79130.t1.exon19;Parent=MS.gene79130.t1
chr3.1 CDS 68645812 68646410 68645812 ID=cds.MS.gene79130.t1;Parent=MS.gene79130.t1
Gene Sequence

>MS.gene79130

ATGGGCGCCAACATTCCTTCGAAAACAATCGAAGAAGAACTCGAACACATTCTCCTCCATCCCGATACCTACATAGGTTCAACTGAAAAACACACTCAAAATCTATGGGTTTACGAAAATGAAGAAATGGTTCACCGTTCTATTTCCTACGTTCCTGGACTTTACAAAATCTTCGACGAGATTCTCCTTGACGCTGCCAAGAGAGATCCGTCGATGGATTCACTCAAAGTTACAATCAATCCGGAAGGGAATACGGTTTCAGTTTATAACAATGGTTACGGTGTTCCAGTAGGGCTTCATAAGGAAGAGGATGTTTATGTTCCTGAATTGTTCTTTGGTCACCTTAACTATGATTATAATGTGAAGAAAACTACTAGTGGAAGAAATGGTTATGGTGCTAAGCTCACCAATATTTTTTCGACTGAGTTTGTTATTGAGATTGCTGATGGACGTCGTTTGAAGAAGTATAAGCAGGTAGTGATTTGTTGATTTATTTGAATTTTTGATTTATGATCCTCCTAGGATTTTTTGAGCTGAAATTTAATTTGTTGATTTAGGATTCTGCTAGGGTTTTTAATGTTTGCTGTACAGCACTGAAATTGAATTTTCTGATTTAGGATTCTGCTAGGGTTTATAATTTTTGGTGTAATGAACTGATATTGAACTTGTTGATATATGATTCTGCTATGGTTTTTCATGTTTGGTGTAATGAATTGAAGTTTTTGTATATTTGATAATATTTTTATATATGCTCAATACAATGTAGAATCACCACAGACATCTGTTTGATTTTATTTTTGTGGATTAAGGATCTTGTTATGGTTTTTATTTTTAATTTTGAATGAAATGAACATAAATATTGGTTTATTTGATAATTTATATGTAGCTTCTACATTTGTGCTTTTGTTTGTGTTTATTTGGGTATGTATTGATGATCGGGTGAATTGGTTGTGTTATGAAGGTTTTCTCAAACAATATGGGGACGAAGTCTGAGCCAGTGATAACCGAATGCAATGCTAGTGAGAACTGGACAAAGGTAACCTTTAAGCCTGACTTGGAAAAGTTTAAAATGACATATCTTGAAGAGGACCTTGTTGCTTTGATGAAGAAGCGTGTGTTGGATATGGCAGGGTGCCTTGGAAAGACTGTTAAGGTTGAACTCAATGGTACCTTGATCCATTTTATGTCGTTCCGTGATTATGTTGACCTCTTCCTGAAATGTGCTGAGAAGTCCAAACCTGCACCCCTGCCAAGGTTCGTTTTTCTCTATGTGCCAGTGCATGTGTGGTTTTCCCGTTGTTGTTATATAATTTGAATTGGTTGTTGTTATTAGGATTCATGCTATAGTAGGTGATAGGTGGGAGATTTGCGTGAGTCTAAGTGATGGCCAGTTTCAACAGGTGACTAGTGAACTTCTCAAGTATACTTCGAGGTCAATTGATGTTAATTTTTTGTCTTACACGTCTTCATTTGTTGTTTTACCAGGTCAGCTTTGTTAACTCGATTGCTACAATCAAGGGTGGGACTCATGTTGATTACATCACCAATCAGATTATTGCCCATGTAATGAACAAAGTAAACAAGAAAAAGAAGGATGCCAATGTGAAAGCTCACACTGTTAAGAATCATTTGTGTGTTTTCGTCAATGCACTTATTGATAACCCTGATTTTGATTCTGAAACTAAGGAGACTCTCACGACTAGTCAAGCTAGTTTTGGTTCTAATTGTGATGTTCCAGAATCAATGCTAAAGGATGGTTAGTTGTGCTTCATTCTTTGGCTGTAATGTGTTCAATTAACTTGAAATTGTGTTCTTATTTACATTCACATGTTATAAATTTCTGCAGTTGAAACATCTGGAATAATGGACACCCTCCTATCATGGGCAGATTTTAACGAAAGTAAAGATTTTAAGACAACTGATGGAACAAAGATCCAGAGGATCCGTGGGATTGTAAGGCTTGAGGATGCCAATGATGCTGGTGGAAGGAACTCAGAGAAGTGTACTTTGATATTGACAGACGGAGATTCTGCTAAAGCCCTTGCTGTAAGTTTTTTTTCTATTGTCTATATGCAAAATAGTATAGAAAAAAGCATATCTCAAATTTTGGTGTGGATATTTTTCATTTAAGAACACAAAGATAAGTTAGAAGCATATAGTTGTTTTAATTTAAAGTCAACCACAAATCTCTAATATTTACAAAGAATGAGAAAAACTTAAATTAGTTTGACATTTTATTTTTGTATGAAGATGGCTGGCCTCTCTGTTGTGGGTCGAGACCACTATGGTGTATTTCCATTGAGAGACAAATTGCTCAATGTGCGGGTAGCGAGCAAGAAACAGATAACAGACAACCGAGAATTTCAAATTATACAGAAGATTCTTGGACTGCAGCAAAACAAAGATTACACAAATGTGAAGTCTTTGAGATATGGTCATTTGATGATTATGGCTGATCAGGTGAGACTTAAAGATCATGGTTTATTGCTGTTTTGACTTTTATGTTTGGTTTCAGTGGGATATGATGGGAATGACGATATACTATGCATGGTTTTTTGTTCCCCAGATTCTAATAGCTCAACTTTATGTGTTCAGGATCATGATGGCTCCCACATCAAAGGGCTATTGATAAACTTTATTCATTCATTCTGGCCATCACTGCTTAAAGTTCCATCTTTCATCGTTGAGTTTACCACTCCCATAATAAGGGTTAGTTTACTATTATTAATGCTGTATGCTGTATATTTGATGGTAATTTTATATTGAAAACACTAAGTTGTACATATTGTTGAATAAAATACCCCTTTTGGATATCACATCCACATCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTAATTCATCTTTCTCTGCAGGCTTCTCATTCAAACGGGACAAAATTATCATTTTATTCCATGTCAGAATATGAAGTGTGGAGAAAAAGAATAGGGAACAATGCAAACTGTTGGAAGATAAAGTACTATAAGGTTTGTTGTTGTAAGCATGGAGAACCTCCATATATTTGCGCCTATAACTGTAAGTATGCCACTATATTTGCATATGCAGCATAAATGATGAAATCTTATTTAATAACTATCAATTATATATGCCTATGCGTATACATGTGATGAATACTATGTTTAAAATTTAATTGCATACACATACACACATATACATTTTATAACAATATTGTACTTTCAAGATCTTGTGACTCTAACCTGGAGAACCTCCATTTTTGTGTTTATAATTCGTCGTTTCAGTGTTTTCTTATTTTGTTTTTGGTGTTTGTATAGGGGTTGGGTACAAGCACTTCCCAAGAAGGGAGAGAGTACTTTCAAGATCTTGATAAGCACATGAAAGAATTCATATGGGTGATGTTTACCAATATGAGAATATGCTAATACAAGCTTACTCCTCTTCGGTGTTTTGTTAACATAAAGTTTACCATTCTTTGTTGTTGCAGCCTAGCACTTGCCATGATCTTGAAGCCAAACTCATTAGATACAAGGGTTTCATTGACAAAGAGCTAATATTGTTCTCAAGGGCAGAACTCCAGAGGTCCATTCCCTCTATGGTTGATGGTCTTAAACCTGGCCAAAGGAAAATTCTTTTCTGCTCATTTAAGAAAAAGTTGTACAAAGAAATTAAAGTTAGCCAATTTATCGGTTATGTGTCTTTGCATTCTGCTTACCACCATGGTGAGCAAAGTCTTGCAAATACAATTATTGGAATGGCACAAGGTTTTGTTGGTAGCAACAACATCAATCTTCTCAATCCAAACGGTCAATTTGGTACTCGTAACTTGGTGAGATGAACCTGTATATGTTGTTATTGCAAAACTCCCTACGTTTCTTTTTAAATTTTATATTTATTGGATATTCCCTCTCCAGGGTGGTAAAGACCATGCTAGTCCCAAATACATTTACACCGAGCTAAATATTGTTACTCGTTTCCTCTTCCATGAAGATGATGATAAGCTTCTTAAATACTTGAATGAGGAGGGAAAATCCATTGAACCAAACTGGTATTTTGTTTTCTCCTTTTTTTCTAAGAGGCTATTTTGTTTGTGATTACTGACAACTAAGGACACCATATACATAGAACTGATTCAAATTTTAATTCCACATAGGTACATACCCATCATTCCTTTGGTTCTTGTCAATGGTAGTGAAGAAATTGGAACAGGTTGGAGTTCTTACATTCCCAACTATAATCCAAGGGAAATTATTGCCAATGTTAGATGTTTGTTGAACGAAGAGGAAATGGTGCCAATGGATCCATGGTACAGAGGATTCAGAGGAACCATTGAGAAAAGTATGAAGCAAGGAGGCTATAAAGTCAATGGCTCAATAGTGAAAATAGATGAACAAACTTTCAGAATCACAGAGCTTCCTATACGGAAGTGGACTGAAGATTACAAGCAGTTTCTTGAATCCATAACTGAAGGGACGCCTAACGTCAACGATCCTTTCATTGAGGTAACATGACTTAAACATTTTCTCGCCATATATACAATAGGTTAATTTGTGTCTTTTTTTCATGTGAAAGTTTTCTTTGTTTCAGGATTTTAGGCAAAATGGGGATGATGCAATTATAGACATTGAGGTCAAAATGAAGCCGGACAAAGTAGCTTCGGTCATGCAAGGACTATTCAAGAAATTTAAATTGACTAGCATTGTTAGCACGAGCAACATGCATCTTTTCGATGCGGAGGGAAAAATTAAGAAATATGACACTCCAGAACAAAGTATAACATTTGCTATGCATAACTGTTTTGAATCACAATATTATGTAATGTTTTTTGTATCATTATGCAGTTCTTGAAGAGTTTTATCCACTTCGGATGGATTATTATGAGAGGAGAAAGGTGAATTATTCTCTCAATGACTTATTATTATGAGAGTTCTATATCTATATTTTATACCAATTAATTAATACGAACTGAAATGCAATTTATGCATGCATGCAGAAATATATGTTGGCCAACCTTGAACGGCTATTGTTGATTTTGGACAATAAAGTCAGATTTATATTAGGGGTTGTGAATGGAGAAATTATTATGATCAACCGGAAAAAGGCTGAATTATTGATTGAGTTGAAGCAGAAAGGTTTTACTCCCATGCTGAGGAAAGGTAAATCTGCAGAACCACAAGTTGTAGGGGCAAATGATGAGAGTTCAGAAGGAGCAGCATGGGGTGACTACGAGTATTTTTTATCCTTACCTATTGAAACTTTGACCATAGAAAGTGTGCAGAAGCTGCTAGATGAAAAGGCTGAAAAGGAAAAGGAGCATGAGGTTTTGATGGGAACCCCAACAAAGTCTTTGTGGTTGAAGGATTTAGACGAGTTTGAAAAGAAACTTGATGTAAGAGACAATACTGAATTTGTTTATTTGTATTTGAAATAATGAAGGTCTGTATTACTATCTTTTGCATGTGTTTCAGGAGCTAGATAGCAAAGAGGCAGAAGAGGATGGAAAAAGATCTAACCAAGCAAGTAAAAAGGCAGCCAATGGTTTTGCTGCAAAACCTGCAATGAAGCCGCCACAACCACGAAAGAATACTAAGAAGACCAAAAATGTTGAGCCAGAGAATGATAATTCTTCAATGGAAATTGGCAAGCCTGAATTGTTGTTTTAGTGATTAATTAATAATAATATTATTATGTGTGATTTTTCAAATTTTGATATCCTTTCAGGTGTGAACTTTCTCGATTTGCATCAACAGAGAATGCTGTTGAAGTTGCAAAACCAAAAGGAGGATCGGTGTTTAAGAATACTAAGAAGGTATGCCAATTGCCTTATTCCTGTACTACATTTTTGTCCTTCCAATCATGTTTAAGCGCTTACATTTTCATAATATGCCGATCATCAGGAAGCTGATGACGATAGCTATATTCTATCTATTCAAGAACGCCTGGCTGCATATAACTTTGAATCACCTGGTGAAAAGTCGGGAGGTGAGTTTTTTTGGCTGAAGTAGTTAAATGTTCTGAATCTTCAATTCATTAGCCATGCTAGTACATAGTACATATATAACACATAACACATAATACTACATATGGTTATACATGCTAGTACTGAAGTTGGGTTTTCTTCCACAGCCATGGAAAGTGAAGAACCCGTACCTGCTGGGAAGAAACAGATTAACAAAAGGGGTGGTGCAAAAAAGAAGTCAAGTACCATAGGTTTGGAATCAGATAGTGATAATGAAGTCATTGATGATGATGACGACTTCGAAGTACAACAGAAGGCTGCCCTAGTTAAGAAGGGAGGGAGAAAGCCTGCTGCTCAAAATGCCAAGAAGGCATCTGCCGCCCCCAAGAAAAGAAATGTAGGCACCAGACAAACATTTGGTCAAAAATTATTTACTGATATGTTGCAGTCAGCTGAAAGTACAGCTACTTCACCAGAGAAGAAAGTGAGGAAAATGAGGGAGTCTCCATTTAACAAGAAAAGTAGCGGTTCTACACTGTACAGGGCTGCTAACAAGGATTCAAGTCAAATTGAAGATTTGTCTCCTGGTTCTGCTTCTAACTCTCCTATAGCAAAGAATGAGGTGGTTGAGATTGCACCACACCCAGCAAGGGCTAAGCCTCACAGGGCTAATCCTAACCAAAACAAATATGTAGCGAGTGGATACGAGAGTGACAATGATTCCAATGAGGATGCAGAATTATCAGATTTTGTAGAAGTCGACTAG

Protein sequence

>MS.gene79130.t1

MGANIPSKTIEEELEHILLHPDTYIGSTEKHTQNLWVYENEEMVHRSISYVPGLYKIFDEILLDAAKRDPSMDSLKVTINPEGNTVSVYNNGYGVPVGLHKEEDVYVPELFFGHLNYDYNVKKTTSGRNGYGAKLTNIFSTEFVIEIADGRRLKKYKQVFSNNMGTKSEPVITECNASENWTKVTFKPDLEKFKMTYLEEDLVALMKKRVLDMAGCLGKTVKVELNGTLIHFMSFRDYVDLFLKCAEKSKPAPLPRIHAIVGDRWEICVSLSDGQFQQVSFVNSIATIKGGTHVDYITNQIIAHVMNKVNKKKKDANVKAHTVKNHLCVFVNALIDNPDFDSETKETLTTSQASFGSNCDVPESMLKDVETSGIMDTLLSWADFNESKDFKTTDGTKIQRIRGIVRLEDANDAGGRNSEKCTLILTDGDSAKALAMAGLSVVGRDHYGVFPLRDKLLNVRVASKKQITDNREFQIIQKILGLQQNKDYTNVKSLRYGHLMIMADQDHDGSHIKGLLINFIHSFWPSLLKVPSFIVEFTTPIIRASHSNGTKLSFYSMSEYEVWRKRIGNNANCWKIKYYKGLGTSTSQEGREYFQDLDKHMKEFIWPSTCHDLEAKLIRYKGFIDKELILFSRAELQRSIPSMVDGLKPGQRKILFCSFKKKLYKEIKVSQFIGYVSLHSAYHHGEQSLANTIIGMAQGFVGSNNINLLNPNGQFGTRNLGGKDHASPKYIYTELNIVTRFLFHEDDDKLLKYLNEEGKSIEPNWYIPIIPLVLVNGSEEIGTGWSSYIPNYNPREIIANVRCLLNEEEMVPMDPWYRGFRGTIEKSMKQGGYKVNGSIVKIDEQTFRITELPIRKWTEDYKQFLESITEGTPNVNDPFIEDFRQNGDDAIIDIEVKMKPDKVASVMQGLFKKFKLTSIVSTSNMHLFDAEGKIKKYDTPEQILEEFYPLRMDYYERRKKYMLANLERLLLILDNKVRFILGVVNGEIIMINRKKAELLIELKQKGFTPMLRKGKSAEPQVVGANDESSEGAAWGDYEYFLSLPIETLTIESVQKLLDEKAEKEKEHEVLMGTPTKSLWLKDLDEFEKKLDELDSKEAEEDGKRSNQASKKAANGFAAKPAMKPPQPRKNTKKTKNVEPENDNSSMEIENAVEVAKPKGGSVFKNTKKEADDDSYILSIQERLAAYNFESPGEKSGAMESEEPVPAGKKQINKRGGAKKKSSTIGLESDSDNEVIDDDDDFEVQQKAALVKKGGRKPAAQNAKKASAAPKKRNVGTRQTFGQKLFTDMLQSAESTATSPEKKVRKMRESPFNKKSSGSTLYRAANKDSSQIEDLSPGSASNSPIAKNEVVEIAPHPARAKPHRANPNQNKYVASGYESDNDSNEDAELSDFVEVD