Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene24697.t1 | XP_003625839.2 | 93.3 | 401 | 27 | 0 | 8 | 408 | 29 | 429 | 2.20E-204 | 721.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene24697.t1 | O14086 | 24.4 | 430 | 264 | 13 | 11 | 404 | 21 | 425 | 1.1e-13 | 79.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene24697.t1 | G7KQW5 | 93.3 | 401 | 27 | 0 | 8 | 408 | 29 | 429 | 1.6e-204 | 721.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene24697.t1 | MTR_7g104810 | 92.822 | 404 | 25 | 1 | 1 | 400 | 18 | 421 | 0.0 | 763 |
| MS.gene24697.t1 | MTR_2g037880 | 91.731 | 387 | 31 | 1 | 11 | 397 | 32 | 417 | 0.0 | 725 |
| MS.gene24697.t1 | MTR_2g037460 | 85.390 | 397 | 52 | 3 | 1 | 397 | 18 | 408 | 0.0 | 677 |
| MS.gene24697.t1 | MTR_2g037460 | 80.678 | 295 | 57 | 0 | 103 | 397 | 27 | 321 | 5.20e-170 | 479 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene24697.t1 | AT3G13940 | 42.402 | 408 | 212 | 5 | 10 | 405 | 46 | 442 | 2.84e-104 | 316 |
Find 92 sgRNAs with CRISPR-Local
Find 393 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCTTCTCATTTCTTATGTTT+TGG | 0.220456 | 7.3:-9635449 | MS.gene24697:CDS |
| ACCAACAAAAGGAGGCATTT+TGG | 0.244318 | 7.3:+9640327 | None:intergenic |
| GCGAAAGGCTGTTGCTGCTT+TGG | 0.278722 | 7.3:-9639735 | MS.gene24697:CDS |
| GAGCTTGTTGTCAGCCCAGC+TGG | 0.283698 | 7.3:-9640214 | MS.gene24697:CDS |
| GAGAACAATCTTTAAGCATT+TGG | 0.294829 | 7.3:-9635347 | MS.gene24697:CDS |
| CGAAAGGCTGTTGCTGCTTT+GGG | 0.295480 | 7.3:-9639734 | MS.gene24697:CDS |
| GATCCAGTTAAGAGCTCTTC+TGG | 0.307345 | 7.3:-9640286 | MS.gene24697:CDS |
| ATCTTAGCCTGAACCGGTTC+AGG | 0.309819 | 7.3:+9640373 | None:intergenic |
| AGATTGGAACCAAGAGTTAA+AGG | 0.317783 | 7.3:-9639836 | MS.gene24697:CDS |
| AGAACAATCTTTAAGCATTT+GGG | 0.329042 | 7.3:-9635346 | MS.gene24697:CDS |
| AAGAATTATATGGTGGTATA+TGG | 0.343973 | 7.3:+9637099 | None:intergenic |
| TGTGCCTATTGGTGGTAATA+AGG | 0.347576 | 7.3:-9640077 | MS.gene24697:intron |
| GAGATATAGCAAAGGATCTA+AGG | 0.362241 | 7.3:-9635387 | MS.gene24697:CDS |
| AACTATAATAAATGTCTTGA+AGG | 0.390558 | 7.3:+9637012 | None:intergenic |
| ACCACCACCTGAACCGGTTC+AGG | 0.391609 | 7.3:-9640380 | MS.gene24697:CDS |
| TACTGAACCACCACCTGAAC+CGG | 0.397830 | 7.3:-9640386 | MS.gene24697:CDS |
| GAACCAGAAGAGCTCTTAAC+TGG | 0.400899 | 7.3:+9640283 | None:intergenic |
| CACTTACATTTCCTCAGATA+AGG | 0.430193 | 7.3:-9635273 | MS.gene24697:CDS |
| ACGCTTAAGATTGTGCCTAT+TGG | 0.430669 | 7.3:-9640088 | MS.gene24697:CDS |
| GCCTGAACCGGTTCAGGTGG+TGG | 0.431706 | 7.3:+9640379 | None:intergenic |
| TTTACCTTATTACCACCAAT+AGG | 0.435713 | 7.3:+9640073 | None:intergenic |
| TATTCCACACCTTTAACTCT+TGG | 0.435788 | 7.3:+9639827 | None:intergenic |
| GTAGTTGCAGAAGAATTATA+TGG | 0.442434 | 7.3:+9637089 | None:intergenic |
| ACCTCAGGAGGCTTATGTAT+TGG | 0.443888 | 7.3:-9637066 | MS.gene24697:CDS |
| TATGCTTGGTGTCTTCGATA+AGG | 0.448148 | 7.3:-9640119 | MS.gene24697:CDS |
| ACTTCAATCTTAGCCTGAAC+CGG | 0.449621 | 7.3:+9640367 | None:intergenic |
| AGCTTGTTGTCAGCCCAGCT+GGG | 0.450223 | 7.3:-9640213 | MS.gene24697:CDS |
| TGAGGGAGAGGCTGCGGCCG+CGG | 0.452708 | 7.3:-9640161 | MS.gene24697:CDS |
| ATTTGTCGGAACGAGTTATG+AGG | 0.459242 | 7.3:-9640179 | MS.gene24697:CDS |
| ATCCTGTTGCAAATAAAAGA+TGG | 0.461686 | 7.3:+9636954 | None:intergenic |
| GAAACAAGGTTATGCATAAG+AGG | 0.468572 | 7.3:-9640240 | MS.gene24697:CDS |
| GGGTCCTCGGTTGAATTTGT+CGG | 0.475487 | 7.3:-9640193 | MS.gene24697:CDS |
| TGTCAGCCCAGCTGGGTCCT+CGG | 0.477176 | 7.3:-9640206 | MS.gene24697:CDS |
| CTTAAGATTGTGCCTATTGG+TGG | 0.495213 | 7.3:-9640085 | MS.gene24697:CDS |
| GAAGTAAAATAACCAACAAA+AGG | 0.496190 | 7.3:+9640316 | None:intergenic |
| ATCTTAGTCGGAGTCGGAGG+CGG | 0.502830 | 7.3:+9639797 | None:intergenic |
| CATTTATTATAGTTTGCAAA+AGG | 0.504652 | 7.3:-9637003 | MS.gene24697:CDS |
| CTTATCTGAGGAAATGTAAG+TGG | 0.511040 | 7.3:+9635274 | None:intergenic |
| AATTCAACCGAGGACCCAGC+TGG | 0.513114 | 7.3:+9640199 | None:intergenic |
| TTCCTCCTTTGCCTTATCTG+AGG | 0.514979 | 7.3:+9635262 | None:intergenic |
| AATCTATGATGCAGAGTGTA+GGG | 0.515819 | 7.3:+9635526 | None:intergenic |
| TTCTTCTGCAACTACACCTC+AGG | 0.520240 | 7.3:-9637081 | MS.gene24697:CDS |
| AAATCATCCTTGCAGACGAA+TGG | 0.522781 | 7.3:-9637040 | MS.gene24697:CDS |
| TGTTGTGTAGATATTCAGAT+TGG | 0.525670 | 7.3:-9639852 | MS.gene24697:intron |
| GAGTTATGAGGGAGAGGCTG+CGG | 0.541104 | 7.3:-9640167 | MS.gene24697:CDS |
| TGGGATACGAAGTGTGGCAT+AGG | 0.544476 | 7.3:+9635294 | None:intergenic |
| TCCACCATCTTAGTCGGAGT+CGG | 0.545273 | 7.3:+9639791 | None:intergenic |
| CTTCTCTCATTGCATCAAGC+AGG | 0.547318 | 7.3:+9637219 | None:intergenic |
| CTTTGCTATATCTCTGTAGT+CGG | 0.547735 | 7.3:+9635396 | None:intergenic |
| GTTTCGATATACTTGAACAT+CGG | 0.549887 | 7.3:+9640258 | None:intergenic |
| ACACCAAGCATATAAGTCGC+GGG | 0.552131 | 7.3:+9640130 | None:intergenic |
| TGAAGAGGAAATACCATCCA+TGG | 0.557476 | 7.3:+9635564 | None:intergenic |
| AAATCTATGATGCAGAGTGT+AGG | 0.572007 | 7.3:+9635525 | None:intergenic |
| AACCCCGCGACTTATATGCT+TGG | 0.574276 | 7.3:-9640133 | MS.gene24697:CDS |
| ATCTCTTCCACCATCTTAGT+CGG | 0.574577 | 7.3:+9639785 | None:intergenic |
| GTTTAAAGATCAGCACTCCA+TGG | 0.576657 | 7.3:-9635581 | MS.gene24697:CDS |
| CGGAACGAGTTATGAGGGAG+AGG | 0.577548 | 7.3:-9640173 | MS.gene24697:CDS |
| GGTAATTCCATTCGTCTGCA+AGG | 0.580906 | 7.3:+9637033 | None:intergenic |
| TTTGTCGGAACGAGTTATGA+GGG | 0.581086 | 7.3:-9640178 | MS.gene24697:CDS |
| AAACAGATTAAAGAAGATTG+AGG | 0.581502 | 7.3:-9636931 | MS.gene24697:intron |
| AACAGAGAGGTCAAATCAGA+TGG | 0.588787 | 7.3:-9639711 | MS.gene24697:intron |
| AGTCGCGGGGTTTCTTGCCG+CGG | 0.589679 | 7.3:+9640144 | None:intergenic |
| GCGGACACAGCAAAAGCGAA+AGG | 0.590771 | 7.3:-9639750 | MS.gene24697:CDS |
| TTCCTCAGATAAGGCAAAGG+AGG | 0.590906 | 7.3:-9635264 | MS.gene24697:CDS |
| AAAGATCAGCACTCCATGGA+TGG | 0.594590 | 7.3:-9635577 | MS.gene24697:CDS |
| AAGTTTCTCGAACTTTGAAG+AGG | 0.595680 | 7.3:+9635549 | None:intergenic |
| GCCTCCGACTCCGACTAAGA+TGG | 0.600213 | 7.3:-9639795 | MS.gene24697:CDS |
| CATTTCCTCAGATAAGGCAA+AGG | 0.600318 | 7.3:-9635267 | MS.gene24697:CDS |
| GATTGTTCTCAGCGTTAGTG+TGG | 0.602853 | 7.3:+9635360 | None:intergenic |
| TTGATGTTTCTGAATCAAGA+AGG | 0.607014 | 7.3:-9635492 | MS.gene24697:CDS |
| ATTCAACCGAGGACCCAGCT+GGG | 0.613198 | 7.3:+9640200 | None:intergenic |
| TTCTGCAACTACACCTCAGG+AGG | 0.613563 | 7.3:-9637078 | MS.gene24697:CDS |
| GTAAAATAACCAACAAAAGG+AGG | 0.618375 | 7.3:+9640319 | None:intergenic |
| GTAGTCGGTGCGGAAATCGT+CGG | 0.618686 | 7.3:+9635411 | None:intergenic |
| GACACCAAGCATATAAGTCG+CGG | 0.626020 | 7.3:+9640129 | None:intergenic |
| TCCGACTCCGACTAAGATGG+TGG | 0.626235 | 7.3:-9639792 | MS.gene24697:CDS |
| ACCATCTTAGTCGGAGTCGG+AGG | 0.628691 | 7.3:+9639794 | None:intergenic |
| TTAGCCTGAACCGGTTCAGG+TGG | 0.630419 | 7.3:+9640376 | None:intergenic |
| GTTGCAGAAGAATTATATGG+TGG | 0.631317 | 7.3:+9637092 | None:intergenic |
| TTATCTGAGGAAATGTAAGT+GGG | 0.642991 | 7.3:+9635275 | None:intergenic |
| AAGAGATGACTGCGGAACAG+CGG | 0.658743 | 7.3:-9639769 | MS.gene24697:CDS |
| CTATATCTCTGTAGTCGGTG+CGG | 0.662832 | 7.3:+9635401 | None:intergenic |
| TCCAATACATAAGCCTCCTG+AGG | 0.665630 | 7.3:+9637065 | None:intergenic |
| TGTTCAAGTATATCGAAACA+AGG | 0.674992 | 7.3:-9640254 | MS.gene24697:CDS |
| CACCAAGCATATAAGTCGCG+GGG | 0.675565 | 7.3:+9640131 | None:intergenic |
| TGTAAGTGGGATACGAAGTG+TGG | 0.684853 | 7.3:+9635288 | None:intergenic |
| GGAACCAAGAGTTAAAGGTG+TGG | 0.693403 | 7.3:-9639831 | MS.gene24697:CDS |
| CGACTACAGAGATATAGCAA+AGG | 0.696422 | 7.3:-9635395 | MS.gene24697:CDS |
| GGCATAGGAAACATTCTGAG+AGG | 0.697707 | 7.3:+9635309 | None:intergenic |
| TTGCTGCTTTGGGAACAGAG+AGG | 0.698305 | 7.3:-9639724 | MS.gene24697:CDS |
| GATGGTGGAAGAGATGACTG+CGG | 0.724819 | 7.3:-9639777 | MS.gene24697:CDS |
| CGTTCCGACAAATTCAACCG+AGG | 0.759021 | 7.3:+9640189 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATATAGAATAAAATAATAAC+AGG | + | chr7.3:9639048-9639067 | None:intergenic | 10.0% |
| !! | TAGTAATCATATTTATAAAA+TGG | - | chr7.3:9637410-9637429 | MS.gene24697:intron | 10.0% |
| !! | TTTATCAAAGAAATATTATA+AGG | + | chr7.3:9636778-9636797 | None:intergenic | 10.0% |
| !!! | ATGAAAGTTTTTAAAAAAAT+AGG | + | chr7.3:9639203-9639222 | None:intergenic | 10.0% |
| !! | AAAAAAATCACATTGAAATA+AGG | + | chr7.3:9636011-9636030 | None:intergenic | 15.0% |
| !! | AAATTATAAATCTTACCTTA+TGG | + | chr7.3:9636921-9636940 | None:intergenic | 15.0% |
| !! | ACTATAACAGTTTAATTAAT+TGG | + | chr7.3:9639015-9639034 | None:intergenic | 15.0% |
| !! | ATAATACAAATTCAAAGATT+AGG | + | chr7.3:9638380-9638399 | None:intergenic | 15.0% |
| !! | ATTAATTAATGGTATATCAT+TGG | - | chr7.3:9637958-9637977 | MS.gene24697:intron | 15.0% |
| !! | CAAATCATAAAATAAACAAT+TGG | + | chr7.3:9636325-9636344 | None:intergenic | 15.0% |
| !! | TCTATAAGAAAAATTATTAC+TGG | - | chr7.3:9637358-9637377 | MS.gene24697:intron | 15.0% |
| !! | TTAATTAATGGTATATCATT+GGG | - | chr7.3:9637959-9637978 | MS.gene24697:intron | 15.0% |
| !! | TTGCATATATTAATATGTAA+GGG | - | chr7.3:9638840-9638859 | MS.gene24697:intron | 15.0% |
| !!! | ATAATGGACAAAATATAAAA+TGG | + | chr7.3:9638203-9638222 | None:intergenic | 15.0% |
| !!! | TAAGCAAAAAATAGTTTTTT+AGG | + | chr7.3:9636205-9636224 | None:intergenic | 15.0% |
| !!! | TAATGGACAAAATATAAAAT+GGG | + | chr7.3:9638202-9638221 | None:intergenic | 15.0% |
| !!! | TGTGTATTTTTTCTATTTAT+AGG | - | chr7.3:9639969-9639988 | MS.gene24697:intron | 15.0% |
| !!! | TTTTTTTAAAAACTTTCATG+TGG | - | chr7.3:9639204-9639223 | MS.gene24697:intron | 15.0% |
| !! | AACTATAATAAATGTCTTGA+AGG | + | chr7.3:9638622-9638641 | None:intergenic | 20.0% |
| !! | AATTGTGAAGTAAAATGAAA+AGG | - | chr7.3:9635579-9635598 | MS.gene24697:CDS | 20.0% |
| !! | CTCATTCAATATTTATTACA+AGG | - | chr7.3:9638884-9638903 | MS.gene24697:intron | 20.0% |
| !! | CTTGCATATATTAATATGTA+AGG | - | chr7.3:9638839-9638858 | MS.gene24697:intron | 20.0% |
| !! | GTTTAGTGAATTATAAAACA+TGG | + | chr7.3:9637019-9637038 | None:intergenic | 20.0% |
| !! | TAATAAATATTGAATGAGCA+GGG | + | chr7.3:9638882-9638901 | None:intergenic | 20.0% |
| !! | TAGATGTTGTCTATAATATT+TGG | - | chr7.3:9638940-9638959 | MS.gene24697:intron | 20.0% |
| !! | TCATAAAATAAACAATTGGT+TGG | + | chr7.3:9636321-9636340 | None:intergenic | 20.0% |
| !!! | ACTTTAAACTTTGAAATCAT+TGG | - | chr7.3:9636277-9636296 | MS.gene24697:intron | 20.0% |
| !!! | CATTTATTATAGTTTGCAAA+AGG | - | chr7.3:9638628-9638647 | MS.gene24697:intron | 20.0% |
| !!! | GCTAAAAGGTTATTTAAAAT+AGG | + | chr7.3:9638254-9638273 | None:intergenic | 20.0% |
| !!! | TAGATACATATTTTATCTTG+TGG | - | chr7.3:9636808-9636827 | MS.gene24697:intron | 20.0% |
| !!! | TATAGAAAAAGCATCTTAAA+TGG | + | chr7.3:9638123-9638142 | None:intergenic | 20.0% |
| !!! | TATCAATACTTTGAAAGTAA+AGG | - | chr7.3:9639075-9639094 | MS.gene24697:intron | 20.0% |
| !!! | TGTTTTTTCATTGTTTTGTT+TGG | - | chr7.3:9639866-9639885 | MS.gene24697:intron | 20.0% |
| ! | AAACAGATTAAAGAAGATTG+AGG | - | chr7.3:9638700-9638719 | MS.gene24697:intron | 25.0% |
| ! | AAGAATTATATGGTGGTATA+TGG | + | chr7.3:9638535-9638554 | None:intergenic | 25.0% |
| ! | AATAAATATTGAATGAGCAG+GGG | + | chr7.3:9638881-9638900 | None:intergenic | 25.0% |
| ! | AATTCTACAACTCAAACTTT+GGG | - | chr7.3:9636727-9636746 | MS.gene24697:intron | 25.0% |
| ! | ACCTATAAATACTAGCTAAA+AGG | + | chr7.3:9638268-9638287 | None:intergenic | 25.0% |
| ! | AGAAACACAGGTAAAAAAAA+GGG | + | chr7.3:9637907-9637926 | None:intergenic | 25.0% |
| ! | AGAACAATCTTTAAGCATTT+GGG | - | chr7.3:9640285-9640304 | MS.gene24697:CDS | 25.0% |
| ! | AGGAAGTGAAAAAATACAAA+AGG | + | chr7.3:9639183-9639202 | None:intergenic | 25.0% |
| ! | ATAAGAAAACAATCACTAAG+CGG | + | chr7.3:9638072-9638091 | None:intergenic | 25.0% |
| ! | ATCTTAAAACAATAAACCTG+AGG | - | chr7.3:9638161-9638180 | MS.gene24697:intron | 25.0% |
| ! | ATGTATGTAGTCACATTTAT+AGG | - | chr7.3:9636154-9636173 | MS.gene24697:intron | 25.0% |
| ! | CTGCCAAGAAAAAAAAAATA+TGG | + | chr7.3:9639708-9639727 | None:intergenic | 25.0% |
| ! | GAACAATTCCAATAAATATC+AGG | + | chr7.3:9638354-9638373 | None:intergenic | 25.0% |
| ! | GAAGTAAAATAACCAACAAA+AGG | + | chr7.3:9635318-9635337 | None:intergenic | 25.0% |
| ! | GATAAAATATGTATCTAGCA+TGG | + | chr7.3:9636805-9636824 | None:intergenic | 25.0% |
| ! | GTAATAAATATTGAATGAGC+AGG | + | chr7.3:9638883-9638902 | None:intergenic | 25.0% |
| ! | GTATATTCAGTCTTCAAATT+GGG | - | chr7.3:9636409-9636428 | MS.gene24697:intron | 25.0% |
| ! | TAAACTGTTATAGTAGTTTC+TGG | - | chr7.3:9639021-9639040 | MS.gene24697:intron | 25.0% |
| ! | TAAGGTTTAATGTATCAGAT+GGG | - | chr7.3:9636965-9636984 | MS.gene24697:CDS | 25.0% |
| ! | TAATCACTATATGAAGACAT+AGG | - | chr7.3:9637328-9637347 | MS.gene24697:intron | 25.0% |
| ! | TAGGTATACCTGATATTTAT+TGG | - | chr7.3:9638343-9638362 | MS.gene24697:intron | 25.0% |
| ! | TGTATATTCAGTCTTCAAAT+TGG | - | chr7.3:9636408-9636427 | MS.gene24697:intron | 25.0% |
| ! | TTAAGGTTTAATGTATCAGA+TGG | - | chr7.3:9636964-9636983 | MS.gene24697:CDS | 25.0% |
| ! | TTATCTTGTGGTTATTAGAA+GGG | - | chr7.3:9636820-9636839 | MS.gene24697:intron | 25.0% |
| ! | TTTATCTTGTGGTTATTAGA+AGG | - | chr7.3:9636819-9636838 | MS.gene24697:intron | 25.0% |
| !! | AACTATTATTTTCAACTCTG+AGG | + | chr7.3:9638796-9638815 | None:intergenic | 25.0% |
| !! | ACTATTATTTTCAACTCTGA+GGG | + | chr7.3:9638795-9638814 | None:intergenic | 25.0% |
| !! | CTGTATCATGGATTAATTAA+TGG | - | chr7.3:9637947-9637966 | MS.gene24697:intron | 25.0% |
| !! | TCTTCTCATTTCTTATGTTT+TGG | - | chr7.3:9640182-9640201 | MS.gene24697:CDS | 25.0% |
| !! | TGCACTTTTATTGAATTAGT+AGG | - | chr7.3:9639829-9639848 | MS.gene24697:CDS | 25.0% |
| !! | TGTTGCTAAGAGAATAATTT+TGG | + | chr7.3:9637078-9637097 | None:intergenic | 25.0% |
| !! | TTTTTGCTTATAAATGTGAC+CGG | - | chr7.3:9636215-9636234 | MS.gene24697:intron | 25.0% |
| !! | TTTTTGCTTATAAATGTGAC+CGG | + | chr7.3:9636234-9636215 | None:intergenic | 25.0% |
| !!! | AAAATTATTACTGGTTTGTG+AGG | - | chr7.3:9637367-9637386 | MS.gene24697:intron | 25.0% |
| !!! | ACCTTTTAGCTAGTATTTAT+AGG | - | chr7.3:9638264-9638283 | MS.gene24697:intron | 25.0% |
| !!! | CAGTTATATTTTAAGCGAAA+AGG | + | chr7.3:9638743-9638762 | None:intergenic | 25.0% |
| !!! | GTGCCATATTTTTTTTTTCT+TGG | - | chr7.3:9639702-9639721 | MS.gene24697:intron | 25.0% |
| !!! | TAAAGTTTTGTTGAACAACA+CGG | - | chr7.3:9637442-9637461 | MS.gene24697:intron | 25.0% |
| !!! | TTTGTTGGTTATTTTACTTC+TGG | - | chr7.3:9635318-9635337 | MS.gene24697:CDS | 25.0% |
| !!! | TTTTTTTTTCTTGGCAGATA+TGG | - | chr7.3:9639711-9639730 | MS.gene24697:intron | 25.0% |
| ACATGACTGAACAGAATAAT+AGG | - | chr7.3:9636851-9636870 | MS.gene24697:intron | 30.0% | |
| ACCTGAAGCTAAAAAGAATT+TGG | - | chr7.3:9638442-9638461 | MS.gene24697:intron | 30.0% | |
| ACGATCTTCTGTCAATAATA+AGG | - | chr7.3:9639262-9639281 | MS.gene24697:intron | 30.0% | |
| ACTGTAGAGTTCGTAATTAT+TGG | - | chr7.3:9638759-9638778 | MS.gene24697:intron | 30.0% | |
| AGTTGACAAAATTAAGGTGT+TGG | - | chr7.3:9639318-9639337 | MS.gene24697:intron | 30.0% | |
| ATAATAAGGTGGAGTCAATA+AGG | - | chr7.3:9639276-9639295 | MS.gene24697:intron | 30.0% | |
| ATACAAGTTTATGGTTGGAT+TGG | - | chr7.3:9636248-9636267 | MS.gene24697:intron | 30.0% | |
| ATATGCAAGTATAGTATCAC+CGG | + | chr7.3:9638828-9638847 | None:intergenic | 30.0% | |
| ATCCTGTTGCAAATAAAAGA+TGG | + | chr7.3:9638680-9638699 | None:intergenic | 30.0% | |
| ATCTTCTGTCAATAATAAGG+TGG | - | chr7.3:9639265-9639284 | MS.gene24697:intron | 30.0% | |
| CAGAAACACAGGTAAAAAAA+AGG | + | chr7.3:9637908-9637927 | None:intergenic | 30.0% | |
| CTCCAAACAGATAAACAATA+AGG | + | chr7.3:9639738-9639757 | None:intergenic | 30.0% | |
| CTGCTAATTATCATTCAACT+AGG | - | chr7.3:9638324-9638343 | MS.gene24697:intron | 30.0% | |
| CTTCTATTACAAATGTTCGT+GGG | - | chr7.3:9639381-9639400 | MS.gene24697:intron | 30.0% | |
| GAATTCTACAACTCAAACTT+TGG | - | chr7.3:9636726-9636745 | MS.gene24697:intron | 30.0% | |
| GAGAACAATCTTTAAGCATT+TGG | - | chr7.3:9640284-9640303 | MS.gene24697:CDS | 30.0% | |
| GGAAGTAGTTGACAAAATTA+AGG | - | chr7.3:9639312-9639331 | MS.gene24697:intron | 30.0% | |
| GGGAATTGTAAGTGTAAATA+AGG | + | chr7.3:9637041-9637060 | None:intergenic | 30.0% | |
| GTAAAATAACCAACAAAAGG+AGG | + | chr7.3:9635315-9635334 | None:intergenic | 30.0% | |
| GTACAATACAAGTTTATGGT+TGG | - | chr7.3:9636243-9636262 | MS.gene24697:intron | 30.0% | |
| GTAGTTGCAGAAGAATTATA+TGG | + | chr7.3:9638545-9638564 | None:intergenic | 30.0% | |
| GTCCTTATTGTTTATCTGTT+TGG | - | chr7.3:9639733-9639752 | MS.gene24697:CDS | 30.0% | |
| GTTAAAATATATACTCCCTC+CGG | - | chr7.3:9636084-9636103 | MS.gene24697:intron | 30.0% | |
| GTTTCGATATACTTGAACAT+CGG | + | chr7.3:9635376-9635395 | None:intergenic | 30.0% | |
| TAAGAAAACAATCACTAAGC+GGG | + | chr7.3:9638071-9638090 | None:intergenic | 30.0% | |
| TACAATACACCAAAAATGGT+GGG | - | chr7.3:9637833-9637852 | MS.gene24697:intron | 30.0% | |
| TATCTTGTGGTTATTAGAAG+GGG | - | chr7.3:9636821-9636840 | MS.gene24697:intron | 30.0% | |
| TGTGTACAATACACCAAAAA+TGG | - | chr7.3:9637829-9637848 | MS.gene24697:intron | 30.0% | |
| TGTTCAAGTATATCGAAACA+AGG | - | chr7.3:9635377-9635396 | MS.gene24697:CDS | 30.0% | |
| TGTTGTGTAGATATTCAGAT+TGG | - | chr7.3:9635779-9635798 | MS.gene24697:intron | 30.0% | |
| TTAGCTAGTATTTATAGGTG+AGG | - | chr7.3:9638269-9638288 | MS.gene24697:intron | 30.0% | |
| TTATCTGAGGAAATGTAAGT+GGG | + | chr7.3:9640359-9640378 | None:intergenic | 30.0% | |
| TTCCACATTGACAAGAATTT+GGG | + | chr7.3:9637228-9637247 | None:intergenic | 30.0% | |
| TTCTCAAGCAAAACATTGAA+AGG | - | chr7.3:9637131-9637150 | MS.gene24697:CDS | 30.0% | |
| TTGAGATGTAGAGGTTAATT+TGG | + | chr7.3:9636578-9636597 | None:intergenic | 30.0% | |
| TTTACCTTATTACCACCAAT+AGG | + | chr7.3:9635561-9635580 | None:intergenic | 30.0% | |
| TTTCCACATTGACAAGAATT+TGG | + | chr7.3:9637229-9637248 | None:intergenic | 30.0% | |
| ! | AATTTTCTGTTTCGAATTCC+TGG | - | chr7.3:9639433-9639452 | MS.gene24697:intron | 30.0% |
| ! | ATTTTCTGTTTCGAATTCCT+GGG | - | chr7.3:9639434-9639453 | MS.gene24697:intron | 30.0% |
| ! | GTCATCAACATGATTTTCTT+TGG | - | chr7.3:9637683-9637702 | MS.gene24697:intron | 30.0% |
| ! | TGCTAAGAGAATAATTTTGG+CGG | + | chr7.3:9637075-9637094 | None:intergenic | 30.0% |
| ! | TTGATGTTTCTGAATCAAGA+AGG | - | chr7.3:9640139-9640158 | MS.gene24697:CDS | 30.0% |
| ! | TTTTGGCGGGATTATAATTT+GGG | + | chr7.3:9637061-9637080 | None:intergenic | 30.0% |
| !! | AAATAGCTGTGTTGATGATT+TGG | - | chr7.3:9635602-9635621 | MS.gene24697:CDS | 30.0% |
| !! | AATAATAGTTTTGCTACCAC+CGG | - | chr7.3:9638806-9638825 | MS.gene24697:intron | 30.0% |
| !! | AATCATGTTGATGACATCTA+AGG | + | chr7.3:9637678-9637697 | None:intergenic | 30.0% |
| !! | ATCCATCTTTTATTTGCAAC+AGG | - | chr7.3:9638675-9638694 | MS.gene24697:intron | 30.0% |
| !! | ATTTTGGCGGGATTATAATT+TGG | + | chr7.3:9637062-9637081 | None:intergenic | 30.0% |
| !! | GATTTCCTAGAGTTTAGTTT+TGG | + | chr7.3:9636627-9636646 | None:intergenic | 30.0% |
| !! | GCATGTTTGTGTTAATTTGT+TGG | - | chr7.3:9635756-9635775 | MS.gene24697:intron | 30.0% |
| !! | GTAGCTTTGTAAAATCACAA+CGG | + | chr7.3:9635660-9635679 | None:intergenic | 30.0% |
| !! | TGTTTTCTTATTTCACTCAG+AGG | - | chr7.3:9638081-9638100 | MS.gene24697:intron | 30.0% |
| !!! | CTCAGAGAGAACTTTATTTT+AGG | + | chr7.3:9639916-9639935 | None:intergenic | 30.0% |
| !!! | TCCAAATTCTTTTTAGCTTC+AGG | + | chr7.3:9638446-9638465 | None:intergenic | 30.0% |
| !!! | TGTTTTGTTTGGATGTGTAT+TGG | - | chr7.3:9639877-9639896 | MS.gene24697:intron | 30.0% |
| AAAACAATAAACCTGAGGAC+AGG | - | chr7.3:9638166-9638185 | MS.gene24697:intron | 35.0% | |
| AAACAGAATGACCAAACAGT+AGG | + | chr7.3:9639519-9639538 | None:intergenic | 35.0% | |
| AAACATGCCAAGTGTATGTT+TGG | + | chr7.3:9635744-9635763 | None:intergenic | 35.0% | |
| AAATCTATGATGCAGAGTGT+AGG | + | chr7.3:9640109-9640128 | None:intergenic | 35.0% | |
| AACTTTCATGTGGATACGAA+TGG | - | chr7.3:9639214-9639233 | MS.gene24697:intron | 35.0% | |
| AAGACATCCAAGGAAAAAAG+AGG | - | chr7.3:9637269-9637288 | MS.gene24697:intron | 35.0% | |
| AATCTATGATGCAGAGTGTA+GGG | + | chr7.3:9640108-9640127 | None:intergenic | 35.0% | |
| ACAAGAATTTGGGAGTTTCA+TGG | + | chr7.3:9637218-9637237 | None:intergenic | 35.0% | |
| ACAGCTAAAACTTTCAACAG+AGG | + | chr7.3:9637600-9637619 | None:intergenic | 35.0% | |
| AGACATCCAAGGAAAAAAGA+GGG | - | chr7.3:9637270-9637289 | MS.gene24697:intron | 35.0% | |
| AGATTGGAACCAAGAGTTAA+AGG | - | chr7.3:9635795-9635814 | MS.gene24697:intron | 35.0% | |
| AGGCAAAATCGAAACTGATA+AGG | + | chr7.3:9639499-9639518 | None:intergenic | 35.0% | |
| ATGTTCATGCAGCAAAGTTA+AGG | - | chr7.3:9636947-9636966 | MS.gene24697:CDS | 35.0% | |
| CAACAAAACTTGAGATGTAG+AGG | + | chr7.3:9636587-9636606 | None:intergenic | 35.0% | |
| CAAGTGTATGTTTGGTATCA+CGG | + | chr7.3:9635736-9635755 | None:intergenic | 35.0% | |
| CACTTACATTTCCTCAGATA+AGG | - | chr7.3:9640358-9640377 | MS.gene24697:CDS | 35.0% | |
| CAGTCTTCAAATTGGGATTT+AGG | - | chr7.3:9636416-9636435 | MS.gene24697:intron | 35.0% | |
| CTATGCTAGTTCATACTTTG+TGG | - | chr7.3:9638011-9638030 | MS.gene24697:intron | 35.0% | |
| CTTATCTGAGGAAATGTAAG+TGG | + | chr7.3:9640360-9640379 | None:intergenic | 35.0% | |
| GAAACAAGGTTATGCATAAG+AGG | - | chr7.3:9635391-9635410 | MS.gene24697:CDS | 35.0% | |
| GAGATATAGCAAAGGATCTA+AGG | - | chr7.3:9640244-9640263 | MS.gene24697:CDS | 35.0% | |
| GCTGAAAAATGGAAACCATA+AGG | - | chr7.3:9636903-9636922 | MS.gene24697:intron | 35.0% | |
| GCTGTACTGAACAGTTAATT+TGG | - | chr7.3:9639540-9639559 | MS.gene24697:intron | 35.0% | |
| GCTTCTATTACAAATGTTCG+TGG | - | chr7.3:9639380-9639399 | MS.gene24697:intron | 35.0% | |
| GTACAATACACCAAAAATGG+TGG | - | chr7.3:9637832-9637851 | MS.gene24697:intron | 35.0% | |
| GTTCGTAATTATTGGCCATT+TGG | - | chr7.3:9638767-9638786 | MS.gene24697:intron | 35.0% | |
| GTTGCAGAAGAATTATATGG+TGG | + | chr7.3:9638542-9638561 | None:intergenic | 35.0% | |
| TATTCCACACCTTTAACTCT+TGG | + | chr7.3:9635807-9635826 | None:intergenic | 35.0% | |
| TCAGTTCCAATTAAGCTAAG+AGG | + | chr7.3:9636678-9636697 | None:intergenic | 35.0% | |
| TCCCACATAAACTAGAGATA+TGG | + | chr7.3:9636491-9636510 | None:intergenic | 35.0% | |
| TCTTGTGTAAAAACAGGGTA+AGG | - | chr7.3:9637805-9637824 | MS.gene24697:intron | 35.0% | |
| TGTAGTCACATTTATAGGTC+AGG | - | chr7.3:9636159-9636178 | MS.gene24697:intron | 35.0% | |
| ! | AAGTTTCTCGAACTTTGAAG+AGG | + | chr7.3:9640085-9640104 | None:intergenic | 35.0% |
| ! | AATTCAATAAAAGTGCAGCC+AGG | + | chr7.3:9639826-9639845 | None:intergenic | 35.0% |
| ! | AGCCATATCTCTAGTTTATG+TGG | - | chr7.3:9636486-9636505 | MS.gene24697:intron | 35.0% |
| ! | ATGAGAAGATTCAGCTTTTC+AGG | + | chr7.3:9640171-9640190 | None:intergenic | 35.0% |
| ! | ATTGTTTATCTGTTTGGAGC+TGG | - | chr7.3:9639739-9639758 | MS.gene24697:CDS | 35.0% |
| ! | CTTTGAAAGTAAAGGAAGCT+TGG | - | chr7.3:9639083-9639102 | MS.gene24697:intron | 35.0% |
| ! | CTTTGCTATATCTCTGTAGT+CGG | + | chr7.3:9640238-9640257 | None:intergenic | 35.0% |
| ! | GAGAATTAGTTTGACCATTG+TGG | + | chr7.3:9637116-9637135 | None:intergenic | 35.0% |
| ! | GATTTAGCTCAAGAATTGCA+AGG | - | chr7.3:9636455-9636474 | MS.gene24697:intron | 35.0% |
| ! | GCAAGAAAGCTTCTTCTTTT+CGG | + | chr7.3:9640001-9640020 | None:intergenic | 35.0% |
| ! | GCCATATCTCTAGTTTATGT+GGG | - | chr7.3:9636487-9636506 | MS.gene24697:intron | 35.0% |
| ! | GGGAGTACAATACAAGTTTA+TGG | - | chr7.3:9636239-9636258 | MS.gene24697:intron | 35.0% |
| ! | TATTTTGCCGCGATCAAAAT+GGG | + | chr7.3:9636353-9636372 | None:intergenic | 35.0% |
| ! | TGACATCTAAGGCAAGTTAA+AGG | + | chr7.3:9637667-9637686 | None:intergenic | 35.0% |
| ! | TTAATTTGGCCTGATTCTAG+TGG | + | chr7.3:9636564-9636583 | None:intergenic | 35.0% |
| ! | TTTCGATTTTGCCTACTGTT+TGG | - | chr7.3:9639505-9639524 | MS.gene24697:intron | 35.0% |
| ! | TTTTACAAGCCACTAGAATC+AGG | - | chr7.3:9636552-9636571 | MS.gene24697:intron | 35.0% |
| ! | TTTTCTGTTTCGAATTCCTG+GGG | - | chr7.3:9639435-9639454 | MS.gene24697:intron | 35.0% |
| !! | ACAAAATTAAGGTGTTGGCT+TGG | - | chr7.3:9639323-9639342 | MS.gene24697:intron | 35.0% |
| !! | GCTAAGAGAATAATTTTGGC+GGG | + | chr7.3:9637074-9637093 | None:intergenic | 35.0% |
| !! | GTGTTGATGATTTGGAATCA+CGG | - | chr7.3:9635610-9635629 | MS.gene24697:CDS | 35.0% |
| !!! | GATTTTCAGGTTGAAGGAAA+TGG | - | chr7.3:9637472-9637491 | MS.gene24697:intron | 35.0% |
| !!! | GTTTGGATGTGTATTGGTTT+TGG | - | chr7.3:9639883-9639902 | MS.gene24697:intron | 35.0% |
| !!! | TCATTTCCCTCTTTTTTCCT+TGG | + | chr7.3:9637279-9637298 | None:intergenic | 35.0% |
| !!! | TTACCCTGTTTTTACACAAG+AGG | + | chr7.3:9637806-9637825 | None:intergenic | 35.0% |
| AAATCATCCTTGCAGACGAA+TGG | - | chr7.3:9638591-9638610 | MS.gene24697:intron | 40.0% | |
| AACAGAGAGGTCAAATCAGA+TGG | - | chr7.3:9635920-9635939 | MS.gene24697:intron | 40.0% | |
| AACCACTAAACACCAAAACG+TGG | + | chr7.3:9639678-9639697 | None:intergenic | 40.0% | |
| AACTTGTATTGTACTCCCTC+CGG | + | chr7.3:9636237-9636256 | None:intergenic | 40.0% | |
| AATTTGGCAACTGCTGTGTT+GGG | - | chr7.3:9639556-9639575 | MS.gene24697:intron | 40.0% | |
| ACAACTCAAACTTTGGGCAA+CGG | - | chr7.3:9636733-9636752 | MS.gene24697:intron | 40.0% | |
| ACAGAGGAACTATGAGAAAG+AGG | + | chr7.3:9637584-9637603 | None:intergenic | 40.0% | |
| ACAGCCTCTTGTGTAAAAAC+AGG | - | chr7.3:9637799-9637818 | MS.gene24697:intron | 40.0% | |
| ACCTCTGACAGACAAATCAA+TGG | + | chr7.3:9639409-9639428 | None:intergenic | 40.0% | |
| ACGCTTAAGATTGTGCCTAT+TGG | - | chr7.3:9635543-9635562 | MS.gene24697:CDS | 40.0% | |
| ACTTCAATCTTAGCCTGAAC+CGG | + | chr7.3:9635267-9635286 | None:intergenic | 40.0% | |
| AGGAACTATGAGAAAGAGGA+CGG | + | chr7.3:9637580-9637599 | None:intergenic | 40.0% | |
| AGGTAAAAAAAAGGGCAACC+CGG | + | chr7.3:9637899-9637918 | None:intergenic | 40.0% | |
| ATAAGGTGGAGTCAATAAGG+TGG | - | chr7.3:9639279-9639298 | MS.gene24697:intron | 40.0% | |
| ATATCATTGGGTCACTCCAT+GGG | - | chr7.3:9637971-9637990 | MS.gene24697:intron | 40.0% | |
| ATCTCTTCCACCATCTTAGT+CGG | + | chr7.3:9635849-9635868 | None:intergenic | 40.0% | |
| ATTTGTCGGAACGAGTTATG+AGG | - | chr7.3:9635452-9635471 | MS.gene24697:CDS | 40.0% | |
| CAGCCTCTTGTGTAAAAACA+GGG | - | chr7.3:9637800-9637819 | MS.gene24697:intron | 40.0% | |
| CATTTCCTCAGATAAGGCAA+AGG | - | chr7.3:9640364-9640383 | MS.gene24697:CDS | 40.0% | |
| CCATGAGAAAAAGACATCCA+AGG | - | chr7.3:9637259-9637278 | MS.gene24697:intron | 40.0% | |
| CGACTACAGAGATATAGCAA+AGG | - | chr7.3:9640236-9640255 | MS.gene24697:CDS | 40.0% | |
| CGGTGGATATGTAAGAATCA+TGG | + | chr7.3:9635716-9635735 | None:intergenic | 40.0% | |
| CGTGATACCAAACATACACT+TGG | - | chr7.3:9635734-9635753 | MS.gene24697:intron | 40.0% | |
| CTCCCAAATTCTTGTCAATG+TGG | - | chr7.3:9637223-9637242 | MS.gene24697:CDS | 40.0% | |
| CTTAAGATTGTGCCTATTGG+TGG | - | chr7.3:9635546-9635565 | MS.gene24697:CDS | 40.0% | |
| GAAGCTTGGACACTTCATAA+TGG | - | chr7.3:9639097-9639116 | MS.gene24697:intron | 40.0% | |
| GCTGTCCAAAACTAAACTCT+AGG | - | chr7.3:9636619-9636638 | MS.gene24697:intron | 40.0% | |
| GTCACACATGAGCTGAAAAA+TGG | - | chr7.3:9636892-9636911 | MS.gene24697:intron | 40.0% | |
| GTTCCAATTAAGCTAAGAGG+TGG | + | chr7.3:9636675-9636694 | None:intergenic | 40.0% | |
| GTTGTTGTCATGTGACTGAA+AGG | - | chr7.3:9637755-9637774 | MS.gene24697:intron | 40.0% | |
| GTTTAAAGATCAGCACTCCA+TGG | - | chr7.3:9640050-9640069 | MS.gene24697:intron | 40.0% | |
| TAAGAGATTGACTACTGCTG+TGG | + | chr7.3:9639617-9639636 | None:intergenic | 40.0% | |
| TAATTTGGCAACTGCTGTGT+TGG | - | chr7.3:9639555-9639574 | MS.gene24697:intron | 40.0% | |
| TATATCATTGGGTCACTCCA+TGG | - | chr7.3:9637970-9637989 | MS.gene24697:intron | 40.0% | |
| TCAGCACAGCTAGCAAATAA+GGG | + | chr7.3:9635967-9635986 | None:intergenic | 40.0% | |
| TCTACATGCTTCAGAAACAC+AGG | + | chr7.3:9637919-9637938 | None:intergenic | 40.0% | |
| TGAAGAGGAAATACCATCCA+TGG | + | chr7.3:9640070-9640089 | None:intergenic | 40.0% | |
| TGCTTATAAATGTGACCGGA+GGG | - | chr7.3:9636219-9636238 | MS.gene24697:intron | 40.0% | |
| TGCTTATAAATGTGACCGGA+GGG | + | chr7.3:9636238-9636219 | None:intergenic | 40.0% | |
| TTGCTTATAAATGTGACCGG+AGG | - | chr7.3:9636218-9636237 | MS.gene24697:intron | 40.0% | |
| TTGCTTATAAATGTGACCGG+AGG | + | chr7.3:9636237-9636218 | None:intergenic | 40.0% | |
| TTTGTCGGAACGAGTTATGA+GGG | - | chr7.3:9635453-9635472 | MS.gene24697:CDS | 40.0% | |
| ! | AAGCTACAAAGCGTAGCTTT+TGG | - | chr7.3:9635673-9635692 | MS.gene24697:intron | 40.0% |
| ! | ACCAAAATGCCTCCTTTTGT+TGG | - | chr7.3:9635303-9635322 | MS.gene24697:CDS | 40.0% |
| ! | CCTTGGATGTCTTTTTCTCA+TGG | + | chr7.3:9637262-9637281 | None:intergenic | 40.0% |
| ! | GTATTTTGCCGCGATCAAAA+TGG | + | chr7.3:9636354-9636373 | None:intergenic | 40.0% |
| ! | TGATGATTTGGAATCACGGT+GGG | - | chr7.3:9635614-9635633 | MS.gene24697:CDS | 40.0% |
| ! | TGTGCCTATTGGTGGTAATA+AGG | - | chr7.3:9635554-9635573 | MS.gene24697:CDS | 40.0% |
| ! | TTGATGATTTGGAATCACGG+TGG | - | chr7.3:9635613-9635632 | MS.gene24697:CDS | 40.0% |
| ! | TTGGTAGGTTGGCAAAGAAT+TGG | - | chr7.3:9639356-9639375 | MS.gene24697:intron | 40.0% |
| !! | AGAAGATTCAGCTTTTCAGG+TGG | + | chr7.3:9640168-9640187 | None:intergenic | 40.0% |
| !! | CTGTTTCTGCTGTTATTACC+TGG | - | chr7.3:9639805-9639824 | MS.gene24697:CDS | 40.0% |
| !! | GCGTAGCTTTTGGAAAAACA+CGG | - | chr7.3:9635683-9635702 | MS.gene24697:intron | 40.0% |
| !! | TAGCTTTTGGAAAAACACGG+TGG | - | chr7.3:9635686-9635705 | MS.gene24697:intron | 40.0% |
| !! | TATGCTTGGTGTCTTCGATA+AGG | - | chr7.3:9635512-9635531 | MS.gene24697:CDS | 40.0% |
| !! | TCCATTGATTTGTCTGTCAG+AGG | - | chr7.3:9639405-9639424 | MS.gene24697:intron | 40.0% |
| !!! | ACAAAAGGAGGCATTTTGGT+TGG | + | chr7.3:9635303-9635322 | None:intergenic | 40.0% |
| !!! | ACCAACAAAAGGAGGCATTT+TGG | + | chr7.3:9635307-9635326 | None:intergenic | 40.0% |
| !!! | ACTGATTTTTTGCTGGGTTG+GGG | - | chr7.3:9639781-9639800 | MS.gene24697:CDS | 40.0% |
| !!! | ATAGGGGACTGATTTTTTGC+TGG | - | chr7.3:9639774-9639793 | MS.gene24697:CDS | 40.0% |
| !!! | GACTGATTTTTTGCTGGGTT+GGG | - | chr7.3:9639780-9639799 | MS.gene24697:CDS | 40.0% |
| !!! | GTTGCTATTTTTCCTGCTTC+AGG | - | chr7.3:9639649-9639668 | MS.gene24697:intron | 40.0% |
| !!! | TAGGGGACTGATTTTTTGCT+GGG | - | chr7.3:9639775-9639794 | MS.gene24697:CDS | 40.0% |
| AAACTGCACACTGTCAGTCT+TGG | + | chr7.3:9637538-9637557 | None:intergenic | 45.0% | |
| AAAGATCAGCACTCCATGGA+TGG | - | chr7.3:9640054-9640073 | MS.gene24697:intron | 45.0% | |
| AACTGCACACTGTCAGTCTT+GGG | + | chr7.3:9637537-9637556 | None:intergenic | 45.0% | |
| ACACCAAGCATATAAGTCGC+GGG | + | chr7.3:9635504-9635523 | None:intergenic | 45.0% | |
| ACCTCAGGAGGCTTATGTAT+TGG | - | chr7.3:9638565-9638584 | MS.gene24697:intron | 45.0% | |
| ATGCGTGAATCTCAGCTTAG+AGG | - | chr7.3:9636062-9636081 | MS.gene24697:intron | 45.0% | |
| CAATAAGGTGGAGTCTGTTG+AGG | - | chr7.3:9639291-9639310 | MS.gene24697:intron | 45.0% | |
| CTATATCTCTGTAGTCGGTG+CGG | + | chr7.3:9640233-9640252 | None:intergenic | 45.0% | |
| CTTCTCTCATTGCATCAAGC+AGG | + | chr7.3:9638415-9638434 | None:intergenic | 45.0% | |
| GAACCAGAAGAGCTCTTAAC+TGG | + | chr7.3:9635351-9635370 | None:intergenic | 45.0% | |
| GACACCAAGCATATAAGTCG+CGG | + | chr7.3:9635505-9635524 | None:intergenic | 45.0% | |
| GATCCAGTTAAGAGCTCTTC+TGG | - | chr7.3:9635345-9635364 | MS.gene24697:CDS | 45.0% | |
| GATTGTTCTCAGCGTTAGTG+TGG | + | chr7.3:9640274-9640293 | None:intergenic | 45.0% | |
| GCACCACCTCTTAGCTTAAT+TGG | - | chr7.3:9636669-9636688 | MS.gene24697:intron | 45.0% | |
| GCAGACTCTTATCCTACGAA+GGG | + | chr7.3:9636378-9636397 | None:intergenic | 45.0% | |
| GGAACCAAGAGTTAAAGGTG+TGG | - | chr7.3:9635800-9635819 | MS.gene24697:intron | 45.0% | |
| GGCATAGGAAACATTCTGAG+AGG | + | chr7.3:9640325-9640344 | None:intergenic | 45.0% | |
| GGTAATTCCATTCGTCTGCA+AGG | + | chr7.3:9638601-9638620 | None:intergenic | 45.0% | |
| GTCAGCACAGCTAGCAAATA+AGG | + | chr7.3:9635968-9635987 | None:intergenic | 45.0% | |
| GTCATGTGACTGAAAGGTCA+CGG | - | chr7.3:9637761-9637780 | MS.gene24697:intron | 45.0% | |
| GTGTATGTTTGGTATCACGG+TGG | + | chr7.3:9635733-9635752 | None:intergenic | 45.0% | |
| TAGAGCTCTGCTCTGTATCA+TGG | - | chr7.3:9637935-9637954 | MS.gene24697:intron | 45.0% | |
| TAGCTAATCAGCAGCCACAA+TGG | - | chr7.3:9637099-9637118 | MS.gene24697:CDS | 45.0% | |
| TATCATTGGGTCACTCCATG+GGG | - | chr7.3:9637972-9637991 | MS.gene24697:intron | 45.0% | |
| TCATGTGACTGAAAGGTCAC+GGG | - | chr7.3:9637762-9637781 | MS.gene24697:intron | 45.0% | |
| TCCAATACATAAGCCTCCTG+AGG | + | chr7.3:9638569-9638588 | None:intergenic | 45.0% | |
| TGCAAGTATAGTATCACCGG+TGG | + | chr7.3:9638825-9638844 | None:intergenic | 45.0% | |
| TGCAGACTCTTATCCTACGA+AGG | + | chr7.3:9636379-9636398 | None:intergenic | 45.0% | |
| TGTAAGTGGGATACGAAGTG+TGG | + | chr7.3:9640346-9640365 | None:intergenic | 45.0% | |
| TGTGTGTGTGTGTTGAACTG+AGG | - | chr7.3:9637619-9637638 | MS.gene24697:intron | 45.0% | |
| TGTTGAACTGAGGCGTGTAA+GGG | - | chr7.3:9637629-9637648 | MS.gene24697:intron | 45.0% | |
| TTCCTCAGATAAGGCAAAGG+AGG | - | chr7.3:9640367-9640386 | MS.gene24697:CDS | 45.0% | |
| TTCCTCCTTTGCCTTATCTG+AGG | + | chr7.3:9640372-9640391 | None:intergenic | 45.0% | |
| TTCTTCTGCAACTACACCTC+AGG | - | chr7.3:9638550-9638569 | MS.gene24697:intron | 45.0% | |
| ! | ATCTGTTTGGAGCTGGTGTT+TGG | - | chr7.3:9639746-9639765 | MS.gene24697:CDS | 45.0% |
| ! | TCAACTCTGAGGGTTCCAAA+TGG | + | chr7.3:9638785-9638804 | None:intergenic | 45.0% |
| ! | TCACTCAGAGGCTGCAATTT+TGG | - | chr7.3:9638093-9638112 | MS.gene24697:intron | 45.0% |
| ! | TTACACAAGAGGCTGTTTCC+AGG | + | chr7.3:9637795-9637814 | None:intergenic | 45.0% |
| !! | ACCTGTGTTTCTGAAGCATG+AGG | - | chr7.3:9637708-9637727 | MS.gene24697:intron | 45.0% |
| !! | CCTGTGTTTCTGAAGCATGA+GGG | - | chr7.3:9637709-9637728 | MS.gene24697:intron | 45.0% |
| !! | CTGTGTTTCTGAAGCATGAG+GGG | - | chr7.3:9637710-9637729 | MS.gene24697:intron | 45.0% |
| !! | TGAAAGGTGCCAAAGCAGTA+TGG | - | chr7.3:9637147-9637166 | MS.gene24697:CDS | 45.0% |
| !!! | AGGAGGCATTTTGGTTGGAT+CGG | + | chr7.3:9635298-9635317 | None:intergenic | 45.0% |
| !!! | GGACTGATTTTTTGCTGGGT+TGG | - | chr7.3:9639779-9639798 | MS.gene24697:CDS | 45.0% |
| !!! | GTCTCGGATTTTCAGGTTGA+AGG | - | chr7.3:9637466-9637485 | MS.gene24697:intron | 45.0% |
| !!! | TGCCACGTTTTGGTGTTTAG+TGG | - | chr7.3:9639673-9639692 | MS.gene24697:intron | 45.0% |
| !!! | TTTTCATAATAATAAAATAA+TGG | + | chr7.3:9638219-9638238 | None:intergenic | 5.0% |
| AAAACGTGGCATCCTGAAGC+AGG | + | chr7.3:9639664-9639683 | None:intergenic | 50.0% | |
| AACCCCGCGACTTATATGCT+TGG | - | chr7.3:9635498-9635517 | MS.gene24697:CDS | 50.0% | |
| AAGAGATGACTGCGGAACAG+CGG | - | chr7.3:9635862-9635881 | MS.gene24697:intron | 50.0% | |
| ACTACAACAGACAATCCCCC+TGG | + | chr7.3:9638989-9639008 | None:intergenic | 50.0% | |
| ACTGCACACTGTCAGTCTTG+GGG | + | chr7.3:9637536-9637555 | None:intergenic | 50.0% | |
| AGCATCTATGCAGAACCCCA+TGG | + | chr7.3:9637990-9638009 | None:intergenic | 50.0% | |
| AGCTGGTGTTTGGCAGTGAT+AGG | - | chr7.3:9639756-9639775 | MS.gene24697:CDS | 50.0% | |
| CAACTTTACCAGTTGCGCCA+AGG | + | chr7.3:9637739-9637758 | None:intergenic | 50.0% | |
| CACCAAGCATATAAGTCGCG+GGG | + | chr7.3:9635503-9635522 | None:intergenic | 50.0% | |
| CATCAAGCGCCATACTGCTT+TGG | + | chr7.3:9637159-9637178 | None:intergenic | 50.0% | |
| CCCTCATGCTTCAGAAACAC+AGG | + | chr7.3:9637712-9637731 | None:intergenic | 50.0% | |
| CGGCAAAATACACCCTTCGT+AGG | - | chr7.3:9636363-9636382 | MS.gene24697:intron | 50.0% | |
| CGTTCCGACAAATTCAACCG+AGG | + | chr7.3:9635445-9635464 | None:intergenic | 50.0% | |
| CTACAACAGACAATCCCCCT+GGG | + | chr7.3:9638988-9639007 | None:intergenic | 50.0% | |
| CTGGTGTTTGGCAGTGATAG+GGG | - | chr7.3:9639758-9639777 | MS.gene24697:CDS | 50.0% | |
| GCTGGTGTTTGGCAGTGATA+GGG | - | chr7.3:9639757-9639776 | MS.gene24697:CDS | 50.0% | |
| GGGTCCTCGGTTGAATTTGT+CGG | - | chr7.3:9635438-9635457 | MS.gene24697:CDS | 50.0% | |
| GTGTTGAACTGAGGCGTGTA+AGG | - | chr7.3:9637628-9637647 | MS.gene24697:intron | 50.0% | |
| TACAACAGACAATCCCCCTG+GGG | + | chr7.3:9638987-9639006 | None:intergenic | 50.0% | |
| TACTGAACCACCACCTGAAC+CGG | - | chr7.3:9635245-9635264 | MS.gene24697:CDS | 50.0% | |
| TCCACCATCTTAGTCGGAGT+CGG | + | chr7.3:9635843-9635862 | None:intergenic | 50.0% | |
| TGAAGCATGAGGGGTAACCT+TGG | - | chr7.3:9637719-9637738 | MS.gene24697:intron | 50.0% | |
| TGGGATACGAAGTGTGGCAT+AGG | + | chr7.3:9640340-9640359 | None:intergenic | 50.0% | |
| TGTTGAACAACACGGCGTCT+CGG | - | chr7.3:9637450-9637469 | MS.gene24697:intron | 50.0% | |
| TTCTGCAACTACACCTCAGG+AGG | - | chr7.3:9638553-9638572 | MS.gene24697:intron | 50.0% | |
| ! | ATCTTAGCCTGAACCGGTTC+AGG | + | chr7.3:9635261-9635280 | None:intergenic | 50.0% |
| ! | GCGTTGGTATCTTGGTAGGT+TGG | - | chr7.3:9639345-9639364 | MS.gene24697:intron | 50.0% |
| ! | TGCTTCAGGATGCCACGTTT+TGG | - | chr7.3:9639663-9639682 | MS.gene24697:intron | 50.0% |
| ! | TTGGGACTGGGGTGATTTTG+TGG | - | chr7.3:9639574-9639593 | MS.gene24697:intron | 50.0% |
| !! | CGAAAGGCTGTTGCTGCTTT+GGG | - | chr7.3:9635897-9635916 | MS.gene24697:intron | 50.0% |
| !! | CTTGGCGTTGGTATCTTGGT+AGG | - | chr7.3:9639341-9639360 | MS.gene24697:intron | 50.0% |
| !! | GATGGTGGAAGAGATGACTG+CGG | - | chr7.3:9635854-9635873 | MS.gene24697:intron | 50.0% |
| !! | GGTGCACTCACAGTCTTGTT+AGG | - | chr7.3:9636986-9637005 | MS.gene24697:CDS | 50.0% |
| !! | TGACCTGCCCATTTTGATCG+CGG | - | chr7.3:9636343-9636362 | MS.gene24697:intron | 50.0% |
| !! | TTAAGGTGTTGGCTTGGCGT+TGG | - | chr7.3:9639329-9639348 | MS.gene24697:intron | 50.0% |
| !! | TTGCTGCTTTGGGAACAGAG+AGG | - | chr7.3:9635907-9635926 | MS.gene24697:intron | 50.0% |
| !! | TTGGCTTGGCGTTGGTATCT+TGG | - | chr7.3:9639337-9639356 | MS.gene24697:intron | 50.0% |
| AAGGTCACGGGTTCAAGTCC+TGG | - | chr7.3:9637774-9637793 | MS.gene24697:intron | 55.0% | |
| AATTCAACCGAGGACCCAGC+TGG | + | chr7.3:9635435-9635454 | None:intergenic | 55.0% | |
| ACCATCTTAGTCGGAGTCGG+AGG | + | chr7.3:9635840-9635859 | None:intergenic | 55.0% | |
| ACTAAAGCTCCCGCATACGC+AGG | + | chr7.3:9637873-9637892 | None:intergenic | 55.0% | |
| ATCTTAGTCGGAGTCGGAGG+CGG | + | chr7.3:9635837-9635856 | None:intergenic | 55.0% | |
| ATTCAACCGAGGACCCAGCT+GGG | + | chr7.3:9635434-9635453 | None:intergenic | 55.0% | |
| CAACTGCTGTGTTGGGACTG+GGG | - | chr7.3:9639563-9639582 | MS.gene24697:intron | 55.0% | |
| CACACTGTCAGTCTTGGGGT+AGG | + | chr7.3:9637532-9637551 | None:intergenic | 55.0% | |
| CGGAACGAGTTATGAGGGAG+AGG | - | chr7.3:9635458-9635477 | MS.gene24697:CDS | 55.0% | |
| CGGTGGGTGTGTCAGAATCA+TGG | - | chr7.3:9635630-9635649 | MS.gene24697:CDS | 55.0% | |
| CTAAAGCTCCCGCATACGCA+GGG | + | chr7.3:9637872-9637891 | None:intergenic | 55.0% | |
| CTGTTTCGAATTCCTGGGGC+AGG | - | chr7.3:9639439-9639458 | MS.gene24697:intron | 55.0% | |
| GAGTTATGAGGGAGAGGCTG+CGG | - | chr7.3:9635464-9635483 | MS.gene24697:CDS | 55.0% | |
| GCAACTGCTGTGTTGGGACT+GGG | - | chr7.3:9639562-9639581 | MS.gene24697:intron | 55.0% | |
| GCAAGTCAGTACCTGTCCTC+AGG | + | chr7.3:9638180-9638199 | None:intergenic | 55.0% | |
| GCGGACACAGCAAAAGCGAA+AGG | - | chr7.3:9635881-9635900 | MS.gene24697:intron | 55.0% | |
| GTAGTCGGTGCGGAAATCGT+CGG | + | chr7.3:9640223-9640242 | None:intergenic | 55.0% | |
| TCCGACTCCGACTAAGATGG+TGG | - | chr7.3:9635839-9635858 | MS.gene24697:intron | 55.0% | |
| TGGGCAACGGCTGTCAGTTA+TGG | - | chr7.3:9636746-9636765 | MS.gene24697:intron | 55.0% | |
| TTCCTGGGGCAGGTGTATTG+CGG | - | chr7.3:9639449-9639468 | MS.gene24697:intron | 55.0% | |
| TTGCCGCGATCAAAATGGGC+AGG | + | chr7.3:9636349-9636368 | None:intergenic | 55.0% | |
| ! | ACACGGCGTCTCGGATTTTC+AGG | - | chr7.3:9637459-9637478 | MS.gene24697:intron | 55.0% |
| ! | ATGCGGGAGCTTTAGTGCAC+CGG | - | chr7.3:9637877-9637896 | MS.gene24697:intron | 55.0% |
| ! | GCGAAAGGCTGTTGCTGCTT+TGG | - | chr7.3:9635896-9635915 | MS.gene24697:intron | 55.0% |
| ! | GGAAGGGGTCCCACCATTTT+TGG | + | chr7.3:9637845-9637864 | None:intergenic | 55.0% |
| ! | TTAGCCTGAACCGGTTCAGG+TGG | + | chr7.3:9635258-9635277 | None:intergenic | 55.0% |
| !! | AGCTTGTTGTCAGCCCAGCT+GGG | - | chr7.3:9635418-9635437 | MS.gene24697:CDS | 55.0% |
| AACAGACAATCCCCCTGGGG+TGG | + | chr7.3:9638984-9639003 | None:intergenic | 60.0% | |
| ACAGACAATCCCCCTGGGGT+GGG | + | chr7.3:9638983-9639002 | None:intergenic | 60.0% | |
| AGGGGTAACCTTGGCGCAAC+TGG | - | chr7.3:9637728-9637747 | MS.gene24697:intron | 60.0% | |
| CATACGCAGGGTACGGGAAG+GGG | + | chr7.3:9637860-9637879 | None:intergenic | 60.0% | |
| CTTCCCGTACCCTGCGTATG+CGG | - | chr7.3:9637860-9637879 | MS.gene24697:intron | 60.0% | |
| GCATACGCAGGGTACGGGAA+GGG | + | chr7.3:9637861-9637880 | None:intergenic | 60.0% | |
| GCCTCCGACTCCGACTAAGA+TGG | - | chr7.3:9635836-9635855 | MS.gene24697:intron | 60.0% | |
| GGCAACTGCTGTGTTGGGAC+TGG | - | chr7.3:9639561-9639580 | MS.gene24697:intron | 60.0% | |
| TCCTGGGGCAGGTGTATTGC+GGG | - | chr7.3:9639450-9639469 | MS.gene24697:intron | 60.0% | |
| TTCCCGTACCCTGCGTATGC+GGG | - | chr7.3:9637861-9637880 | MS.gene24697:intron | 60.0% | |
| ! | ACCACCACCTGAACCGGTTC+AGG | - | chr7.3:9635251-9635270 | MS.gene24697:CDS | 60.0% |
| ! | TGCGGGAGCTTTAGTGCACC+GGG | - | chr7.3:9637878-9637897 | MS.gene24697:intron | 60.0% |
| !! | GAGCTTGTTGTCAGCCCAGC+TGG | - | chr7.3:9635417-9635436 | MS.gene24697:CDS | 60.0% |
| ACCCGCAATACACCTGCCCC+AGG | + | chr7.3:9639454-9639473 | None:intergenic | 65.0% | |
| AGTCGCGGGGTTTCTTGCCG+CGG | + | chr7.3:9635490-9635509 | None:intergenic | 65.0% | |
| CAGACAATCCCCCTGGGGTG+GGG | + | chr7.3:9638982-9639001 | None:intergenic | 65.0% | |
| CGCATACGCAGGGTACGGGA+AGG | + | chr7.3:9637862-9637881 | None:intergenic | 65.0% | |
| CTCCCGCATACGCAGGGTAC+GGG | + | chr7.3:9637866-9637885 | None:intergenic | 65.0% | |
| GCTCCCGCATACGCAGGGTA+CGG | + | chr7.3:9637867-9637886 | None:intergenic | 65.0% | |
| TGTCAGCCCAGCTGGGTCCT+CGG | - | chr7.3:9635425-9635444 | MS.gene24697:CDS | 65.0% | |
| ! | GCCTGAACCGGTTCAGGTGG+TGG | + | chr7.3:9635255-9635274 | None:intergenic | 65.0% |
| ACAATCCCCCTGGGGTGGGG+TGG | + | chr7.3:9638979-9638998 | None:intergenic | 70.0% | |
| CAATCCCCCTGGGGTGGGGT+GGG | + | chr7.3:9638978-9638997 | None:intergenic | 70.0% | |
| CCAACCCACCCCACCCCAGG+GGG | - | chr7.3:9638971-9638990 | MS.gene24697:intron | 75.0% | |
| CCCAACCCACCCCACCCCAG+GGG | - | chr7.3:9638970-9638989 | MS.gene24697:intron | 75.0% | |
| CCCCAACCCACCCCACCCCA+GGG | - | chr7.3:9638969-9638988 | MS.gene24697:intron | 75.0% | |
| TGAGGGAGAGGCTGCGGCCG+CGG | - | chr7.3:9635470-9635489 | MS.gene24697:CDS | 75.0% | |
| ! | CCCCTGGGGTGGGGTGGGTT+GGG | + | chr7.3:9638973-9638992 | None:intergenic | 75.0% |
| !! | CCCTGGGGTGGGGTGGGTTG+GGG | + | chr7.3:9638972-9638991 | None:intergenic | 75.0% |
| !! | CCTGGGGTGGGGTGGGTTGG+GGG | + | chr7.3:9638971-9638990 | None:intergenic | 75.0% |
| !! | CTGGGGTGGGGTGGGTTGGG+GGG | + | chr7.3:9638970-9638989 | None:intergenic | 75.0% |
| !! | TGGGGTGGGGTGGGTTGGGG+GGG | + | chr7.3:9638969-9638988 | None:intergenic | 75.0% |
| ! | CCCCCAACCCACCCCACCCC+AGG | - | chr7.3:9638968-9638987 | MS.gene24697:intron | 80.0% |
| ! | CCCCCTGGGGTGGGGTGGGT+TGG | + | chr7.3:9638974-9638993 | None:intergenic | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.3 | gene | 9635240 | 9640413 | 9635240 | ID=MS.gene24697 |
| chr7.3 | mRNA | 9635240 | 9640413 | 9635240 | ID=MS.gene24697.t1;Parent=MS.gene24697 |
| chr7.3 | exon | 9640078 | 9640413 | 9640078 | ID=MS.gene24697.t1.exon1;Parent=MS.gene24697.t1 |
| chr7.3 | CDS | 9640078 | 9640413 | 9640078 | ID=cds.MS.gene24697.t1;Parent=MS.gene24697.t1 |
| chr7.3 | exon | 9639712 | 9639864 | 9639712 | ID=MS.gene24697.t1.exon2;Parent=MS.gene24697.t1 |
| chr7.3 | CDS | 9639712 | 9639864 | 9639712 | ID=cds.MS.gene24697.t1;Parent=MS.gene24697.t1 |
| chr7.3 | exon | 9636932 | 9637246 | 9636932 | ID=MS.gene24697.t1.exon3;Parent=MS.gene24697.t1 |
| chr7.3 | CDS | 9636932 | 9637246 | 9636932 | ID=cds.MS.gene24697.t1;Parent=MS.gene24697.t1 |
| chr7.3 | exon | 9635240 | 9635662 | 9635240 | ID=MS.gene24697.t1.exon4;Parent=MS.gene24697.t1 |
| chr7.3 | CDS | 9635240 | 9635662 | 9635240 | ID=cds.MS.gene24697.t1;Parent=MS.gene24697.t1 |
| Gene Sequence |
| Protein sequence |
