Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene00518.t1 | XP_003589051.1 | 98.1 | 810 | 15 | 0 | 1 | 810 | 5 | 814 | 0.00E+00 | 1548.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene00518.t1 | Q8RXU6 | 51.2 | 822 | 374 | 13 | 6 | 809 | 2 | 814 | 2.6e-229 | 796.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene00518.t1 | G7IBB8 | 98.1 | 810 | 15 | 0 | 1 | 810 | 5 | 814 | 0.0e+00 | 1548.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene59369 | MS.gene00518 | PPI |
| MS.gene00518 | MS.gene09988 | PPI |
| MS.gene00518 | MS.gene68085 | PPI |
| MS.gene00518 | MS.gene023799 | PPI |
| MS.gene00518 | MS.gene52173 | PPI |
| MS.gene005792 | MS.gene00518 | PPI |
| MS.gene42236 | MS.gene00518 | PPI |
| MS.gene00518 | MS.gene60517 | PPI |
| MS.gene27648 | MS.gene00518 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene00518.t1 | MTR_1g017880 | 98.025 | 810 | 16 | 0 | 1 | 810 | 5 | 814 | 0.0 | 1646 |
| MS.gene00518.t1 | MTR_8g014080 | 59.679 | 811 | 260 | 13 | 14 | 810 | 21 | 778 | 0.0 | 908 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene00518.t1 | AT4G07410 | 52.906 | 826 | 354 | 14 | 6 | 809 | 2 | 814 | 0.0 | 813 |
| MS.gene00518.t1 | AT1G27470 | 50.978 | 818 | 375 | 11 | 7 | 809 | 3 | 809 | 0.0 | 762 |
| MS.gene00518.t1 | AT4G07410 | 51.485 | 707 | 308 | 13 | 123 | 809 | 10 | 701 | 0.0 | 662 |
Find 171 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTGATGGTTCTGTTTCTTTC+TGG | 0.100831 | 1.2:-5193519 | MS.gene00518:CDS |
| GAATTGTTTCTTCGTTAATT+TGG | 0.176483 | 1.2:-5193588 | MS.gene00518:CDS |
| CGTTTCTTAACTTTAAAATT+TGG | 0.180643 | 1.2:+5186734 | None:intergenic |
| TATGGTCACTACTGTATTTA+AGG | 0.191664 | 1.2:-5191697 | MS.gene00518:intron |
| AACGAAGAAACAATTCTATT+AGG | 0.229249 | 1.2:+5193595 | None:intergenic |
| TTAAGAAACGGACTAAATTT+AGG | 0.232699 | 1.2:-5186721 | MS.gene00518:CDS |
| TGTAGCACCCTTGCTAATTC+AGG | 0.233267 | 1.2:-5189512 | MS.gene00518:CDS |
| TCTCCCTTGTGTTTAGTAAT+AGG | 0.234480 | 1.2:+5191449 | None:intergenic |
| AACATACCTTCTTGACTTAT+CGG | 0.261865 | 1.2:+5190220 | None:intergenic |
| TGATGGTTCTGTTTCTTTCT+GGG | 0.283655 | 1.2:-5193518 | MS.gene00518:CDS |
| TTGATATTGTAGACAATTCA+TGG | 0.284777 | 1.2:-5193622 | MS.gene00518:intron |
| ATGAGCTTCAATACCTGATT+TGG | 0.288173 | 1.2:+5191766 | None:intergenic |
| ACGAAGAAACAATTCTATTA+GGG | 0.299802 | 1.2:+5193596 | None:intergenic |
| CTCAGAAATGTTCGCAGAAC+TGG | 0.301296 | 1.2:-5189596 | MS.gene00518:CDS |
| CTTGTAGGATAATTCGAATC+TGG | 0.302847 | 1.2:-5191793 | MS.gene00518:intron |
| ATACCGTTTGTTTCAATTGT+TGG | 0.312010 | 1.2:+5193491 | None:intergenic |
| TCCAACCTTTGACCCGGTTC+AGG | 0.322094 | 1.2:+5192357 | None:intergenic |
| CCAGTCCACAGACATATTTA+TGG | 0.326187 | 1.2:-5186545 | MS.gene00518:CDS |
| TGTTGGCCGATTCAAGATTA+AGG | 0.326470 | 1.2:-5189552 | MS.gene00518:CDS |
| GCAGTGGTAGCGTCCAGTTT+TGG | 0.327130 | 1.2:-5191502 | MS.gene00518:CDS |
| TTACCACAAATGGGCTCATT+CGG | 0.334403 | 1.2:-5189819 | MS.gene00518:CDS |
| CTTGTTTCTGCTAATACAAT+TGG | 0.334774 | 1.2:-5193746 | MS.gene00518:CDS |
| GATACAGTGAGCTTTAAAAT+TGG | 0.341032 | 1.2:+5189730 | None:intergenic |
| CTATCAGTACATTGTTGATC+TGG | 0.341100 | 1.2:+5188361 | None:intergenic |
| GACTCTTGGCACCACTGAAT+TGG | 0.349185 | 1.2:+5192454 | None:intergenic |
| AATCAACTGGTGTCTCAATC+TGG | 0.350274 | 1.2:-5192628 | MS.gene00518:CDS |
| TACCACAAATGGGCTCATTC+GGG | 0.350862 | 1.2:-5189818 | MS.gene00518:CDS |
| TGGTGTCTCAATCTGGAAAA+TGG | 0.351689 | 1.2:-5192621 | MS.gene00518:CDS |
| AAGATGGTTCTTTAGAGCTT+TGG | 0.362564 | 1.2:-5193769 | MS.gene00518:CDS |
| TCATAATATGTCAGCAGGAC+TGG | 0.363369 | 1.2:-5191747 | MS.gene00518:CDS |
| AGGAGATTTCACGAGTTTCC+TGG | 0.367008 | 1.2:-5188249 | MS.gene00518:CDS |
| ACGATTCTAGTTACCACAAA+TGG | 0.376710 | 1.2:-5189829 | MS.gene00518:CDS |
| GGTTATTTGAAGAAATTTCA+TGG | 0.380212 | 1.2:-5192542 | MS.gene00518:CDS |
| CTTCACGGCAATCCCAAAAC+TGG | 0.385655 | 1.2:+5191489 | None:intergenic |
| TATATTTAAAGTCCCTGAAC+CGG | 0.389609 | 1.2:-5192370 | MS.gene00518:CDS |
| CGAATCTGGGATGCCAAATC+AGG | 0.389622 | 1.2:-5191779 | MS.gene00518:CDS |
| TTCACCTTCATCTGGCTTCA+CGG | 0.395271 | 1.2:+5186826 | None:intergenic |
| GCACTGGTTCATTTCAAGAT+TGG | 0.397434 | 1.2:-5188418 | MS.gene00518:CDS |
| TTTGAAGAAATTTCATGGTT+CGG | 0.397802 | 1.2:-5192537 | MS.gene00518:CDS |
| CAGTCCACAGACATATTTAT+GGG | 0.410750 | 1.2:-5186544 | MS.gene00518:CDS |
| TGAAACATTTCACCTTCATC+TGG | 0.411563 | 1.2:+5186818 | None:intergenic |
| TTGGCTGCCGTGAATTGCTT+TGG | 0.419955 | 1.2:-5188768 | MS.gene00518:CDS |
| CGACGTAGATGCCAAGAAAT+GGG | 0.420058 | 1.2:-5188307 | MS.gene00518:CDS |
| TTCAACTTCATCTTCTGTGA+TGG | 0.427675 | 1.2:-5188196 | MS.gene00518:CDS |
| AGTGACGATGTTGAAACTAA+TGG | 0.427761 | 1.2:-5192581 | MS.gene00518:CDS |
| GATGCTAAATTCATATGTTC+AGG | 0.430069 | 1.2:-5192222 | MS.gene00518:CDS |
| CTCTGCCGGTGCCGATGGAC+AGG | 0.430377 | 1.2:-5191384 | MS.gene00518:intron |
| TCGACGTAGATGCCAAGAAA+TGG | 0.431681 | 1.2:-5188308 | MS.gene00518:CDS |
| CTGTGATGGTTTATAGCTCC+AGG | 0.431945 | 1.2:-5188182 | MS.gene00518:intron |
| TATTTAACTTGGATTTACTA+AGG | 0.436717 | 1.2:-5188734 | MS.gene00518:intron |
| CTGGAAAATGGCTGTGACAT+TGG | 0.437384 | 1.2:-5192609 | MS.gene00518:CDS |
| AGATATCTATGTATTTAACT+TGG | 0.437584 | 1.2:-5188745 | MS.gene00518:CDS |
| GGTGCCTCTGTTACAGCTTG+TGG | 0.438583 | 1.2:-5188393 | MS.gene00518:CDS |
| GAGAACAGCATATTGTGATC+AGG | 0.440444 | 1.2:+5191404 | None:intergenic |
| AAAATCATTGAATGGGCAAA+TGG | 0.441619 | 1.2:+5189377 | None:intergenic |
| TCACCTTCATCTGGCTTCAC+GGG | 0.442399 | 1.2:+5186827 | None:intergenic |
| TCCTCTCTGTTGATAGTAGC+TGG | 0.443254 | 1.2:-5189344 | MS.gene00518:CDS |
| GTGGACATGAACTTTGTATA+TGG | 0.444074 | 1.2:-5191715 | MS.gene00518:CDS |
| TTTCGTGAACTGCAAGATGA+TGG | 0.447707 | 1.2:-5188849 | MS.gene00518:CDS |
| TTGGATTGCTCGAGAACATC+AGG | 0.450008 | 1.2:+5192473 | None:intergenic |
| GGTTTGGCAGATGCTTTGCC+AGG | 0.455428 | 1.2:-5189890 | MS.gene00518:intron |
| TAGTAGCTGGCTATGATAGA+AGG | 0.455685 | 1.2:-5189331 | MS.gene00518:CDS |
| CTTGTAGCTAGAGCTGTAAC+TGG | 0.456465 | 1.2:+5193824 | None:intergenic |
| AATTGGTTGGCACTGTCAAT+TGG | 0.458618 | 1.2:-5193729 | MS.gene00518:intron |
| CTCGAGAACATCAGGTGAAT+CGG | 0.459706 | 1.2:+5192481 | None:intergenic |
| CACAATATGCTGTTCTCTGC+CGG | 0.462673 | 1.2:-5191398 | MS.gene00518:CDS |
| CATAATATGTCAGCAGGACT+GGG | 0.463162 | 1.2:-5191746 | MS.gene00518:CDS |
| GAAATACATTTGTTCTTCCT+AGG | 0.464080 | 1.2:-5188269 | MS.gene00518:CDS |
| TTGTGGTAACTAGAATCGTC+TGG | 0.480597 | 1.2:+5189833 | None:intergenic |
| AAAGCCTACTCTTTATAAAG+TGG | 0.480694 | 1.2:-5189462 | MS.gene00518:CDS |
| TCTTCGTTAATTTGGTGTCC+TGG | 0.480811 | 1.2:-5193580 | MS.gene00518:CDS |
| GTAGCACCCTTGCTAATTCA+GGG | 0.483581 | 1.2:-5189511 | MS.gene00518:CDS |
| TTTGTGATGGGTGGTTCGGC+TGG | 0.484859 | 1.2:+5188819 | None:intergenic |
| CTGTTCTCTGCCGGTGCCGA+TGG | 0.486551 | 1.2:-5191389 | MS.gene00518:CDS |
| TATCAGTACATTGTTGATCT+GGG | 0.487210 | 1.2:+5188362 | None:intergenic |
| TCAAAAGCAACTGCGACTCT+TGG | 0.488710 | 1.2:+5192440 | None:intergenic |
| GAAACTAATGGTCATCACAT+AGG | 0.495553 | 1.2:-5192569 | MS.gene00518:CDS |
| CCAACCTTTGACCCGGTTCA+GGG | 0.498273 | 1.2:+5192358 | None:intergenic |
| AAGATGAAGTTGAAGAGGGA+GGG | 0.498473 | 1.2:+5188205 | None:intergenic |
| GTTGAGAGGGAGCTCCTTCA+CGG | 0.501006 | 1.2:+5191474 | None:intergenic |
| GTTGCTGCTTCGCGTGAAGA+TGG | 0.505241 | 1.2:-5193785 | MS.gene00518:CDS |
| CGATTCTAGTTACCACAAAT+GGG | 0.506040 | 1.2:-5189828 | MS.gene00518:CDS |
| ATGGGTGTTCTTTGAGGCAC+AGG | 0.507036 | 1.2:+5189704 | None:intergenic |
| ACATGAATGGGTGTTCTTTG+AGG | 0.509660 | 1.2:+5189698 | None:intergenic |
| CAAGGGAGATGTACATGCTC+TGG | 0.510792 | 1.2:-5191435 | MS.gene00518:CDS |
| GCCCCGAATGAGCCCATTTG+TGG | 0.510898 | 1.2:+5189816 | None:intergenic |
| TTTAGTAATAGGTTGTTGAG+AGG | 0.515218 | 1.2:+5191460 | None:intergenic |
| TTAATTTGGTGTCCTGGTGG+TGG | 0.517102 | 1.2:-5193574 | MS.gene00518:CDS |
| TGGGCAAATGGTAATCTCTC+AGG | 0.518521 | 1.2:+5189389 | None:intergenic |
| TGGTTCATTTCAAGATTGGA+TGG | 0.519161 | 1.2:-5188414 | MS.gene00518:CDS |
| AGTATTAAGTGCTACATGAA+TGG | 0.520020 | 1.2:+5189685 | None:intergenic |
| ACTACTGACCACATCGGACC+AGG | 0.520037 | 1.2:+5186580 | None:intergenic |
| TTAGTAATAGGTTGTTGAGA+GGG | 0.520199 | 1.2:+5191461 | None:intergenic |
| CTATGTCTTCTAAGATGGAT+AGG | 0.522766 | 1.2:-5193892 | None:intergenic |
| TCATCTTGCAGTTCACGAAA+GGG | 0.525251 | 1.2:+5188852 | None:intergenic |
| GAAGCTCATAATATGTCAGC+AGG | 0.525722 | 1.2:-5191752 | MS.gene00518:CDS |
| CACAGAAGATGAAGTTGAAG+AGG | 0.525956 | 1.2:+5188200 | None:intergenic |
| CAGACATATTTATGGGGCAT+AGG | 0.526587 | 1.2:-5186537 | None:intergenic |
| GATATCTCCAAAGCAATTCA+CGG | 0.527256 | 1.2:+5188761 | None:intergenic |
| TTTCTGCTAATACAATTGGT+TGG | 0.528706 | 1.2:-5193742 | MS.gene00518:CDS |
| AAACTAATGGTCATCACATA+GGG | 0.530093 | 1.2:-5192568 | MS.gene00518:CDS |
| CACAGCAACAGTCAAGGCTC+GGG | 0.530876 | 1.2:+5190243 | None:intergenic |
| ATCATCTTGCAGTTCACGAA+AGG | 0.532225 | 1.2:+5188851 | None:intergenic |
| CAACAATAGAGAAAGAGAAG+TGG | 0.532308 | 1.2:-5190303 | MS.gene00518:CDS |
| GAGATGCCTTAATCTTGAAT+CGG | 0.532571 | 1.2:+5189546 | None:intergenic |
| CATCCCATGCTTATCTCAGC+AGG | 0.532891 | 1.2:-5189794 | MS.gene00518:CDS |
| TTGTAGGATAATTCGAATCT+GGG | 0.536163 | 1.2:-5191792 | MS.gene00518:intron |
| GCACAGCAACAGTCAAGGCT+CGG | 0.541082 | 1.2:+5190242 | None:intergenic |
| GGAAACTCGTGAAATCTCCT+AGG | 0.541613 | 1.2:+5188252 | None:intergenic |
| TTCATACACTCGATTTGAAG+AGG | 0.545523 | 1.2:+5188332 | None:intergenic |
| TCTCCAACAATTGAAACAAA+CGG | 0.546284 | 1.2:-5193494 | MS.gene00518:intron |
| CAGATGCTTTGCCAGGTGAA+AGG | 0.548106 | 1.2:-5189883 | MS.gene00518:CDS |
| AAGTCCCTGAACCGGGTCAA+AGG | 0.555249 | 1.2:-5192362 | MS.gene00518:intron |
| GCTAGAGCTGTAACTGGTGA+AGG | 0.559021 | 1.2:+5193830 | None:intergenic |
| ATATGTTCAGGAAGTAGTGA+TGG | 0.563275 | 1.2:-5192210 | MS.gene00518:CDS |
| TATGTCAGCAGGACTGGGTA+GGG | 0.564418 | 1.2:-5191741 | MS.gene00518:CDS |
| TTTAAGTGTGACTTGGAGCA+CGG | 0.565542 | 1.2:-5192244 | MS.gene00518:CDS |
| ATCTCCTGCTGAGATAAGCA+TGG | 0.567403 | 1.2:+5189790 | None:intergenic |
| CAGATGGTGCTTGAATCAAC+TGG | 0.567745 | 1.2:-5192641 | MS.gene00518:CDS |
| GAGTTTCCTGGTGAAGTCAT+CGG | 0.568608 | 1.2:-5188237 | MS.gene00518:CDS |
| CCTGGTGGTGGATTTCCTCA+TGG | 0.569249 | 1.2:-5193562 | MS.gene00518:CDS |
| TAGTTCTGATAAGCAGTGGT+TGG | 0.571569 | 1.2:-5188787 | MS.gene00518:CDS |
| ACATACCTGTCCATCGGCAC+CGG | 0.573944 | 1.2:+5191379 | None:intergenic |
| TTGCCCGTGAAGCCAGATGA+AGG | 0.574206 | 1.2:-5186830 | MS.gene00518:CDS |
| GTATTAAGTGCTACATGAAT+GGG | 0.574311 | 1.2:+5189686 | None:intergenic |
| CATTTCTGAGATGTAGCAAA+CGG | 0.574984 | 1.2:+5189609 | None:intergenic |
| AAAACTCCCCTGAATTAGCA+AGG | 0.581392 | 1.2:+5189504 | None:intergenic |
| AATGGTCATCACATAGGGAA+TGG | 0.581718 | 1.2:-5192563 | MS.gene00518:CDS |
| GAAGATGAAGTTGAAGAGGG+AGG | 0.583223 | 1.2:+5188204 | None:intergenic |
| ATATTTAAAGTCCCTGAACC+GGG | 0.584952 | 1.2:-5192369 | MS.gene00518:CDS |
| AGAACAGCATATTGTGATCA+GGG | 0.585979 | 1.2:+5191405 | None:intergenic |
| GCTCTAGCTACAAGCATAGA+CGG | 0.586506 | 1.2:-5193815 | MS.gene00518:CDS |
| ATATGTCAGCAGGACTGGGT+AGG | 0.587065 | 1.2:-5191742 | MS.gene00518:CDS |
| TTACTAGTTCTGATAAGCAG+TGG | 0.597067 | 1.2:-5188791 | MS.gene00518:CDS |
| GGTTGTGGATGTCAATAGCT+CGG | 0.597562 | 1.2:-5188895 | MS.gene00518:CDS |
| GAAAGTCCGATGACTTCACC+AGG | 0.599319 | 1.2:+5188231 | None:intergenic |
| AGGTCTGGGATACTTGTTAG+CGG | 0.601890 | 1.2:-5191530 | MS.gene00518:CDS |
| ACGTAGATGCCAAGAAATGG+GGG | 0.606256 | 1.2:-5188305 | MS.gene00518:CDS |
| TACGCAAAATCTGAAACTGT+TGG | 0.608344 | 1.2:-5189569 | MS.gene00518:CDS |
| ACAGAAGATGAAGTTGAAGA+GGG | 0.608601 | 1.2:+5188201 | None:intergenic |
| GACGTAGATGCCAAGAAATG+GGG | 0.609239 | 1.2:-5188306 | MS.gene00518:CDS |
| TAGCACCCTTGCTAATTCAG+GGG | 0.610186 | 1.2:-5189510 | MS.gene00518:CDS |
| CTACTGACCACATCGGACCA+GGG | 0.610907 | 1.2:+5186581 | None:intergenic |
| CCATGAGGAAATCCACCACC+AGG | 0.612207 | 1.2:+5193562 | None:intergenic |
| TATGTTCAGGAAGTAGTGAT+GGG | 0.616373 | 1.2:-5192209 | MS.gene00518:intron |
| GCAGGACTGGGTAGGGACAG+TGG | 0.617074 | 1.2:-5191734 | MS.gene00518:CDS |
| CTCTCCACTTTATAAAGAGT+AGG | 0.621814 | 1.2:+5189458 | None:intergenic |
| ACAACCTATTACTAAACACA+AGG | 0.630218 | 1.2:-5191453 | MS.gene00518:CDS |
| CCATAAATATGTCTGTGGAC+TGG | 0.632084 | 1.2:+5186545 | None:intergenic |
| TCTCCTGCTGAGATAAGCAT+GGG | 0.635324 | 1.2:+5189791 | None:intergenic |
| ATCAGTACATTGTTGATCTG+GGG | 0.638142 | 1.2:+5188363 | None:intergenic |
| AAAGTGGAGAGATCTGAAGC+CGG | 0.638678 | 1.2:-5189446 | MS.gene00518:CDS |
| AAATCCACAAGCTGTAACAG+AGG | 0.638859 | 1.2:+5188389 | None:intergenic |
| AGAGAGTCCAACCTTTGACC+CGG | 0.640803 | 1.2:+5192351 | None:intergenic |
| GCAACTACATACCTGTCCAT+CGG | 0.647576 | 1.2:+5191373 | None:intergenic |
| TATCGGCACAGCAACAGTCA+AGG | 0.652629 | 1.2:+5190237 | None:intergenic |
| AAACTCCCCTGAATTAGCAA+GGG | 0.654023 | 1.2:+5189505 | None:intergenic |
| ATGCCCCATAAATATGTCTG+TGG | 0.658679 | 1.2:+5186540 | None:intergenic |
| GAAGACTGCAGTAAAAGCAT+TGG | 0.659899 | 1.2:+5189647 | None:intergenic |
| TCGTTAATTTGGTGTCCTGG+TGG | 0.662690 | 1.2:-5193577 | MS.gene00518:CDS |
| ACCACAAATGGGCTCATTCG+GGG | 0.664226 | 1.2:-5189817 | MS.gene00518:CDS |
| GCTGTGCCGATAAGTCAAGA+AGG | 0.667546 | 1.2:-5190226 | MS.gene00518:intron |
| ATCTAAACTACTGACCACAT+CGG | 0.670818 | 1.2:+5186574 | None:intergenic |
| CTTGTTAGCGGAGACAGCAG+TGG | 0.672051 | 1.2:-5191518 | MS.gene00518:CDS |
| TCTCGAGCAATCCAATTCAG+TGG | 0.681037 | 1.2:-5192465 | MS.gene00518:CDS |
| TCAAGATTAAGGCATCTCGT+AGG | 0.683885 | 1.2:-5189541 | MS.gene00518:CDS |
| CAACCTATTACTAAACACAA+GGG | 0.685925 | 1.2:-5191452 | MS.gene00518:CDS |
| GAAGAAAACAAACGACCATG+AGG | 0.687642 | 1.2:+5193547 | None:intergenic |
| CGTAGATGCCAAGAAATGGG+GGG | 0.700968 | 1.2:-5188304 | MS.gene00518:CDS |
| GCCAGCTACTATCAACAGAG+AGG | 0.712284 | 1.2:+5189343 | None:intergenic |
| AGTCCACAGACATATTTATG+GGG | 0.720718 | 1.2:-5186543 | MS.gene00518:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.2 | gene | 5186538 | 5193900 | 5186538 | ID=MS.gene00518 |
| chr1.2 | mRNA | 5186538 | 5193900 | 5186538 | ID=MS.gene00518.t1;Parent=MS.gene00518 |
| chr1.2 | exon | 5193730 | 5193900 | 5193730 | ID=MS.gene00518.t1.exon1;Parent=MS.gene00518.t1 |
| chr1.2 | CDS | 5193730 | 5193900 | 5193730 | ID=cds.MS.gene00518.t1;Parent=MS.gene00518.t1 |
| chr1.2 | exon | 5193495 | 5193632 | 5193495 | ID=MS.gene00518.t1.exon2;Parent=MS.gene00518.t1 |
| chr1.2 | CDS | 5193495 | 5193632 | 5193495 | ID=cds.MS.gene00518.t1;Parent=MS.gene00518.t1 |
| chr1.2 | exon | 5192363 | 5192660 | 5192363 | ID=MS.gene00518.t1.exon3;Parent=MS.gene00518.t1 |
| chr1.2 | CDS | 5192363 | 5192660 | 5192363 | ID=cds.MS.gene00518.t1;Parent=MS.gene00518.t1 |
| chr1.2 | exon | 5192210 | 5192273 | 5192210 | ID=MS.gene00518.t1.exon4;Parent=MS.gene00518.t1 |
| chr1.2 | CDS | 5192210 | 5192273 | 5192210 | ID=cds.MS.gene00518.t1;Parent=MS.gene00518.t1 |
| chr1.2 | exon | 5191698 | 5191808 | 5191698 | ID=MS.gene00518.t1.exon5;Parent=MS.gene00518.t1 |
| chr1.2 | CDS | 5191698 | 5191808 | 5191698 | ID=cds.MS.gene00518.t1;Parent=MS.gene00518.t1 |
| chr1.2 | exon | 5191385 | 5191550 | 5191385 | ID=MS.gene00518.t1.exon6;Parent=MS.gene00518.t1 |
| chr1.2 | CDS | 5191385 | 5191550 | 5191385 | ID=cds.MS.gene00518.t1;Parent=MS.gene00518.t1 |
| chr1.2 | exon | 5190227 | 5190350 | 5190227 | ID=MS.gene00518.t1.exon7;Parent=MS.gene00518.t1 |
| chr1.2 | CDS | 5190227 | 5190350 | 5190227 | ID=cds.MS.gene00518.t1;Parent=MS.gene00518.t1 |
| chr1.2 | exon | 5189325 | 5189902 | 5189325 | ID=MS.gene00518.t1.exon8;Parent=MS.gene00518.t1 |
| chr1.2 | CDS | 5189325 | 5189902 | 5189325 | ID=cds.MS.gene00518.t1;Parent=MS.gene00518.t1 |
| chr1.2 | exon | 5188735 | 5188916 | 5188735 | ID=MS.gene00518.t1.exon9;Parent=MS.gene00518.t1 |
| chr1.2 | CDS | 5188735 | 5188916 | 5188735 | ID=cds.MS.gene00518.t1;Parent=MS.gene00518.t1 |
| chr1.2 | exon | 5188183 | 5188443 | 5188183 | ID=MS.gene00518.t1.exon10;Parent=MS.gene00518.t1 |
| chr1.2 | CDS | 5188183 | 5188443 | 5188183 | ID=cds.MS.gene00518.t1;Parent=MS.gene00518.t1 |
| chr1.2 | exon | 5186538 | 5186877 | 5186538 | ID=MS.gene00518.t1.exon11;Parent=MS.gene00518.t1 |
| chr1.2 | CDS | 5186538 | 5186877 | 5186538 | ID=cds.MS.gene00518.t1;Parent=MS.gene00518.t1 |
| Gene Sequence |
| Protein sequence |
