Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene09988.t1 | XP_013469320.1 | 93.7 | 536 | 34 | 0 | 1 | 536 | 1 | 536 | 1.50E-280 | 974.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene09988.t1 | Q9P4X3 | 40.7 | 459 | 261 | 4 | 23 | 479 | 9 | 458 | 2.8e-94 | 347.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene09988.t1 | A0A072VPQ9 | 93.7 | 536 | 34 | 0 | 1 | 536 | 1 | 536 | 1.1e-280 | 974.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene09988.t1 | MTR_1g090877 | 97.575 | 536 | 13 | 0 | 1 | 536 | 1 | 536 | 0.0 | 1083 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene09988.t1 | AT3G10530 | 66.542 | 535 | 169 | 5 | 4 | 532 | 5 | 535 | 0.0 | 717 |
| MS.gene09988.t1 | AT1G04510 | 25.610 | 246 | 163 | 11 | 118 | 348 | 224 | 464 | 1.99e-12 | 70.1 |
| MS.gene09988.t1 | AT1G04510 | 25.610 | 246 | 163 | 11 | 118 | 348 | 224 | 464 | 2.01e-12 | 70.1 |
Find 142 sgRNAs with CRISPR-Local
Find 429 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTGGCTTCTACCAACAAATT+TGG | 0.135356 | 1.4:+72261740 | MS.gene09988:CDS |
| AGTGTTGAGGCTTCAGTTTC+TGG | 0.160612 | 1.4:+72261703 | MS.gene09988:CDS |
| CAGGTTCTGAGGGATGTTTC+TGG | 0.181331 | 1.4:+72262133 | MS.gene09988:CDS |
| ATTTGGGATGCTTCTTTATC+AGG | 0.215020 | 1.4:+72261757 | MS.gene09988:CDS |
| TCACTCTAATGGCCACTTAA+TGG | 0.230172 | 1.4:+72261973 | MS.gene09988:CDS |
| ACAAACCGCTGTAAAGATTT+TGG | 0.230964 | 1.4:-72262676 | None:intergenic |
| GGGAAATTTCGAACTGGTTT+AGG | 0.234558 | 1.4:+72261803 | MS.gene09988:CDS |
| TCAGTGGAAGGCTTGTTATT+TGG | 0.239131 | 1.4:-72256043 | None:intergenic |
| CGACCATACGAAGACGTTCT+AGG | 0.250652 | 1.4:+72262226 | MS.gene09988:CDS |
| CGCTGTTTAGGTGTTTCAAA+TGG | 0.263474 | 1.4:-72262328 | None:intergenic |
| TACTTCAAGTGGCCGGTATA+TGG | 0.286386 | 1.4:+72259959 | MS.gene09988:CDS |
| ACTTTGGAGTTTAGTCAAAA+AGG | 0.286444 | 1.4:+72262079 | MS.gene09988:CDS |
| TAAGGGCCACCTAGCAATTA+TGG | 0.314562 | 1.4:+72259995 | MS.gene09988:CDS |
| GAGCCTGATCAGGGAGCTTC+AGG | 0.314653 | 1.4:+72260031 | MS.gene09988:CDS |
| GTTCTCCTGCTCCTGGAATA+AGG | 0.316425 | 1.4:-72262279 | None:intergenic |
| AGGAGAAGCTGCTAATTTAA+AGG | 0.324134 | 1.4:+72256345 | MS.gene09988:CDS |
| ATTGCTAGAGAGAAATTATA+TGG | 0.329371 | 1.4:+72256504 | MS.gene09988:CDS |
| GAAGCAGAAATTACTTTCTC+TGG | 0.332799 | 1.4:-72260499 | None:intergenic |
| TGGCTTCTACCAACAAATTT+GGG | 0.332802 | 1.4:+72261741 | MS.gene09988:CDS |
| CATGACTCATTCAATGGTTA+AGG | 0.339749 | 1.4:+72262177 | MS.gene09988:CDS |
| TTGTCTAGTATCCTTATTCC+AGG | 0.340451 | 1.4:+72262268 | MS.gene09988:CDS |
| TGGTAGAAGCCAGAAGAAAA+TGG | 0.349479 | 1.4:-72261730 | None:intergenic |
| GGTATCCATACATATATAAT+CGG | 0.354871 | 1.4:+72261078 | MS.gene09988:intron |
| TACAACGGGGTTGTTTCTTT+AGG | 0.372666 | 1.4:+72261854 | MS.gene09988:CDS |
| TGGAATTAAACCCTTACAAC+GGG | 0.383580 | 1.4:+72261840 | MS.gene09988:CDS |
| TCTCACCGTGCCGATCTTGC+TGG | 0.385573 | 1.4:-72262413 | None:intergenic |
| CAATGCAAAGAGGCCTTACT+TGG | 0.392464 | 1.4:+72262585 | MS.gene09988:CDS |
| GCTCTGGCATTTCACTCTAA+TGG | 0.394208 | 1.4:+72261962 | MS.gene09988:CDS |
| AAAGAAACAACCCCGTTGTA+AGG | 0.402029 | 1.4:-72261851 | None:intergenic |
| TGATGAATCTGAGCCTGATC+AGG | 0.411334 | 1.4:+72260021 | MS.gene09988:CDS |
| GAGAACCCAACTTTGATTCA+TGG | 0.414011 | 1.4:+72262296 | MS.gene09988:CDS |
| ATCTGCTAAAGCTGCTGCTC+AGG | 0.414409 | 1.4:+72256530 | MS.gene09988:CDS |
| TCCAAAGTATTTGCATGGTC+TGG | 0.419087 | 1.4:-72262064 | None:intergenic |
| AAGAAGCATCCCAAATTTGT+TGG | 0.420273 | 1.4:-72261750 | None:intergenic |
| GAAGTAAAGTCTATTGTATA+CGG | 0.427102 | 1.4:-72259942 | None:intergenic |
| CCAAAGTTTAGTTATGATGA+TGG | 0.429592 | 1.4:-72262709 | None:intergenic |
| TAACAAGCCTTCCACTGAAC+AGG | 0.438951 | 1.4:+72256048 | MS.gene09988:CDS |
| GTTACAATGGGTACAATAGC+TGG | 0.439170 | 1.4:+72261782 | MS.gene09988:CDS |
| TGCAACCCATGAATCAAAGT+TGG | 0.442723 | 1.4:-72262302 | None:intergenic |
| GTACCTGAAGCTCCCTGATC+AGG | 0.447625 | 1.4:-72260034 | None:intergenic |
| GCTGTTTAGGTGTTTCAAAT+GGG | 0.451780 | 1.4:-72262327 | None:intergenic |
| TCTAGGCATAGGACATTCAA+TGG | 0.452742 | 1.4:+72262243 | MS.gene09988:CDS |
| GCAACCCATGAATCAAAGTT+GGG | 0.456061 | 1.4:-72262301 | None:intergenic |
| CAGAAACATCCCTCAGAACC+TGG | 0.456648 | 1.4:-72262132 | None:intergenic |
| GTGGAAGGCTTGTTATTTGG+AGG | 0.457414 | 1.4:-72256040 | None:intergenic |
| CAATATGATATTACTTTGCC+AGG | 0.459637 | 1.4:+72257577 | MS.gene09988:CDS |
| CTGGCAAAGTAATATCATAT+TGG | 0.461462 | 1.4:-72257576 | None:intergenic |
| CCGTCCCGATTATATATGTA+TGG | 0.461991 | 1.4:-72261083 | None:intergenic |
| TATGGCTATTGGTGGTCGTA+AGG | 0.463097 | 1.4:+72259977 | MS.gene09988:CDS |
| GGATCCAGCATGATTGTCTC+AGG | 0.464997 | 1.4:-72262391 | None:intergenic |
| GGCTTGCTTGCGTGTGGTAA+TGG | 0.469336 | 1.4:+72262100 | MS.gene09988:CDS |
| CTTTATCAGGATGTTACAAT+GGG | 0.469440 | 1.4:+72261770 | MS.gene09988:CDS |
| CTTGACAAGGGGAGACGAAC+TGG | 0.470362 | 1.4:-72261912 | None:intergenic |
| ACCTAAACAGCGAAGAGAAA+AGG | 0.470581 | 1.4:+72262339 | MS.gene09988:CDS |
| ACCAGACCATGCAAATACTT+TGG | 0.471252 | 1.4:+72262063 | MS.gene09988:CDS |
| TTGGGACTTGAGGAAATTTG+AGG | 0.474292 | 1.4:+72262027 | MS.gene09988:CDS |
| GCTAACTGCACAAGAGATAG+AGG | 0.476125 | 1.4:+72262453 | MS.gene09988:CDS |
| AGTGGCCGGTATATGGCTAT+TGG | 0.477411 | 1.4:+72259966 | MS.gene09988:CDS |
| CTGGTGCACAGAACTATTCA+AGG | 0.480463 | 1.4:+72262152 | MS.gene09988:CDS |
| ACAATAGACTTTACTTCAAG+TGG | 0.483812 | 1.4:+72259948 | MS.gene09988:CDS |
| AGAACCCAACTTTGATTCAT+GGG | 0.484488 | 1.4:+72262297 | MS.gene09988:CDS |
| AAGGCATAGAAAAGACGTAT+AGG | 0.486312 | 1.4:+72257503 | MS.gene09988:CDS |
| AAGGTACATGACTCATTCAA+TGG | 0.486947 | 1.4:+72262171 | MS.gene09988:CDS |
| CAAGTAAGGCCTCTTTGCAT+TGG | 0.491994 | 1.4:-72262584 | None:intergenic |
| AAATTAAGCTTTGGGACTTG+AGG | 0.496393 | 1.4:+72262017 | MS.gene09988:CDS |
| AGGAGCATGGTTCAGTGTTG+AGG | 0.496647 | 1.4:+72261690 | MS.gene09988:intron |
| AAGTTGGGTTCTCCTGCTCC+TGG | 0.498038 | 1.4:-72262286 | None:intergenic |
| ATAGCTGGGAAATTTCGAAC+TGG | 0.501469 | 1.4:+72261797 | MS.gene09988:CDS |
| GCCACTTAATGGCTACTGCC+GGG | 0.504950 | 1.4:+72261984 | MS.gene09988:CDS |
| TTGCTGATGAACTAGAACTT+AGG | 0.505406 | 1.4:+72256305 | MS.gene09988:CDS |
| TGGTAATGGTTCATATATCC+AGG | 0.507565 | 1.4:+72262114 | MS.gene09988:CDS |
| AGCTGCTGCTCAGGCTGAGA+AGG | 0.509056 | 1.4:+72256539 | MS.gene09988:CDS |
| CACAGAGCTTCATTGCCTAA+AGG | 0.511846 | 1.4:+72261106 | MS.gene09988:CDS |
| CTCACCGTGCCGATCTTGCT+GGG | 0.515340 | 1.4:-72262412 | None:intergenic |
| AGCTGCTGTGGAAGCTGTCA+AGG | 0.516829 | 1.4:+72262486 | MS.gene09988:CDS |
| GTCAAGATGCTATGTCATCA+AGG | 0.517188 | 1.4:+72261929 | MS.gene09988:CDS |
| ACAAAAGGAAGAAGCAAGGC+TGG | 0.517202 | 1.4:+72262529 | MS.gene09988:CDS |
| TCTTTATCAGGATGTTACAA+TGG | 0.517499 | 1.4:+72261769 | MS.gene09988:CDS |
| GGCCACTTAATGGCTACTGC+CGG | 0.524321 | 1.4:+72261983 | MS.gene09988:CDS |
| AGTATCCTTATTCCAGGAGC+AGG | 0.524714 | 1.4:+72262274 | MS.gene09988:CDS |
| AAGCAGAAATTACTTTCTCT+GGG | 0.524964 | 1.4:-72260498 | None:intergenic |
| TGAAATGCCAGAGCTGAGAC+TGG | 0.525633 | 1.4:-72261953 | None:intergenic |
| TCAAGGGCCAGTCTCAGCTC+TGG | 0.526804 | 1.4:+72261946 | MS.gene09988:CDS |
| GAAGAAACAGAAAACTAATG+AGG | 0.532077 | 1.4:+72262642 | MS.gene09988:CDS |
| ATTCATACCTGTTCAGTGGA+AGG | 0.532716 | 1.4:-72256055 | None:intergenic |
| ATGACTCATTCAATGGTTAA+GGG | 0.540953 | 1.4:+72262178 | MS.gene09988:CDS |
| TCCACCTGAGACAATCATGC+TGG | 0.543781 | 1.4:+72262387 | MS.gene09988:CDS |
| CTAGGCATAGGACATTCAAT+GGG | 0.546036 | 1.4:+72262244 | MS.gene09988:CDS |
| ATGCTGGATCCCAGCAAGAT+CGG | 0.552539 | 1.4:+72262403 | MS.gene09988:CDS |
| TTCATATATCCAGGTTCTGA+GGG | 0.557477 | 1.4:+72262123 | MS.gene09988:CDS |
| GTTCATATATCCAGGTTCTG+AGG | 0.561682 | 1.4:+72262122 | MS.gene09988:CDS |
| GAAAACAAAAGGAAGAAGCA+AGG | 0.562476 | 1.4:+72262525 | MS.gene09988:CDS |
| AAGAAACAACCCCGTTGTAA+GGG | 0.563141 | 1.4:-72261850 | None:intergenic |
| ATGGTTAAGGGATACCAGAT+AGG | 0.564220 | 1.4:+72262190 | MS.gene09988:CDS |
| CCCCGGCAGTAGCCATTAAG+TGG | 0.570074 | 1.4:-72261985 | None:intergenic |
| GGCCGGTATATGGCTATTGG+TGG | 0.570218 | 1.4:+72259969 | MS.gene09988:CDS |
| GTATCCATACATATATAATC+GGG | 0.570684 | 1.4:+72261079 | MS.gene09988:CDS |
| TTACAATGGGTACAATAGCT+GGG | 0.572680 | 1.4:+72261783 | MS.gene09988:CDS |
| TGGATTATGCCTAGCGAAGG+AGG | 0.572860 | 1.4:+72257466 | MS.gene09988:CDS |
| AAGAAACAGAAAACTAATGA+GGG | 0.573119 | 1.4:+72262643 | MS.gene09988:CDS |
| ATGCCTAGAACGTCTTCGTA+TGG | 0.573287 | 1.4:-72262229 | None:intergenic |
| GACCACCAATAGCCATATAC+CGG | 0.573429 | 1.4:-72259971 | None:intergenic |
| GGTCAGGATGGAAGCTGCTG+TGG | 0.574141 | 1.4:+72262474 | MS.gene09988:CDS |
| CTGCACAAGAGATAGAGGTC+AGG | 0.574557 | 1.4:+72262458 | MS.gene09988:CDS |
| TCATCATGTCCATAATTGCT+AGG | 0.576850 | 1.4:-72260004 | None:intergenic |
| TCTATATAACCTCCTTCGCT+AGG | 0.576884 | 1.4:-72257475 | None:intergenic |
| GTTTCTTTAGGCCACTCAGC+CGG | 0.578772 | 1.4:+72261866 | MS.gene09988:CDS |
| ATGGCTATTGGTGGTCGTAA+GGG | 0.579219 | 1.4:+72259978 | MS.gene09988:CDS |
| GCTTGAGATATCTACTTCAC+CGG | 0.581565 | 1.4:-72257545 | None:intergenic |
| AAAGACGTATAGGATTAAGC+AGG | 0.582780 | 1.4:+72257513 | MS.gene09988:CDS |
| ACAAGGGGAGACGAACTGGT+TGG | 0.583473 | 1.4:-72261908 | None:intergenic |
| TAGACTTTACTTCAAGTGGC+CGG | 0.590973 | 1.4:+72259952 | MS.gene09988:CDS |
| TAAACTCCAAAGTATTTGCA+TGG | 0.595112 | 1.4:-72262069 | None:intergenic |
| TCCAGCATGATTGTCTCAGG+TGG | 0.597209 | 1.4:-72262388 | None:intergenic |
| AAGTAGATATCTCAAGCTCA+AGG | 0.603892 | 1.4:+72257551 | MS.gene09988:CDS |
| TTTAGGACGCACAAATGTGA+TGG | 0.605701 | 1.4:+72261820 | MS.gene09988:CDS |
| TAGCGAAGGAGGTTATATAG+AGG | 0.605779 | 1.4:+72257477 | MS.gene09988:CDS |
| GATGAATCTGAGCCTGATCA+GGG | 0.606259 | 1.4:+72260022 | MS.gene09988:CDS |
| CTTCCACATAGTAACTGTAC+CGG | 0.607488 | 1.4:-72261885 | None:intergenic |
| TCAAGATGCTATGTCATCAA+GGG | 0.609077 | 1.4:+72261930 | MS.gene09988:CDS |
| ATGACATAGCATCTTGACAA+GGG | 0.617617 | 1.4:-72261924 | None:intergenic |
| CCACTTAATGGCTACTGCCG+GGG | 0.620121 | 1.4:+72261985 | MS.gene09988:CDS |
| AAATATTCATACCTGTTCAG+TGG | 0.624277 | 1.4:-72256059 | None:intergenic |
| ATGCAATTGCCAATGCAAAG+AGG | 0.626680 | 1.4:+72262575 | MS.gene09988:CDS |
| CAGTGGATTATGCCTAGCGA+AGG | 0.626814 | 1.4:+72257463 | MS.gene09988:intron |
| ATTAAGCAGGAGACAATAGC+CGG | 0.629818 | 1.4:+72257526 | MS.gene09988:CDS |
| TACGAAGACGTTCTAGGCAT+AGG | 0.632328 | 1.4:+72262232 | MS.gene09988:CDS |
| ACAAGAGATAGAGGTCAGGA+TGG | 0.635479 | 1.4:+72262462 | MS.gene09988:CDS |
| AACTGCCAAAATCTTTACAG+CGG | 0.639793 | 1.4:+72262671 | MS.gene09988:CDS |
| GGAGGTTATATAGAGGCTGA+AGG | 0.643831 | 1.4:+72257484 | MS.gene09988:CDS |
| GCTGCTGTGGAAGCTGTCAA+GGG | 0.644582 | 1.4:+72262487 | MS.gene09988:CDS |
| CAGCCGGTACAGTTACTATG+TGG | 0.648457 | 1.4:+72261882 | MS.gene09988:CDS |
| GGATCCCAGCAAGATCGGCA+CGG | 0.650581 | 1.4:+72262408 | MS.gene09988:CDS |
| ATGGAATTAAACCCTTACAA+CGG | 0.650725 | 1.4:+72261839 | MS.gene09988:CDS |
| AAGAGAAACTGTGCGTGATG+TGG | 0.656485 | 1.4:+72260442 | MS.gene09988:CDS |
| TAGTAACTGTACCGGCTGAG+TGG | 0.670354 | 1.4:-72261877 | None:intergenic |
| CCATACATATATAATCGGGA+CGG | 0.677850 | 1.4:+72261083 | MS.gene09988:CDS |
| AGGTCAAAGAAGTATCTCAG+AGG | 0.688390 | 1.4:+72256325 | MS.gene09988:CDS |
| TGACATAGCATCTTGACAAG+GGG | 0.690641 | 1.4:-72261923 | None:intergenic |
| TCATGTCCATAATTGCTAGG+TGG | 0.709708 | 1.4:-72260001 | None:intergenic |
| GATGACATAGCATCTTGACA+AGG | 0.739903 | 1.4:-72261925 | None:intergenic |
| GGAATTAAACCCTTACAACG+GGG | 0.772754 | 1.4:+72261841 | MS.gene09988:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAAAGAAAAAAATAATACTT+TGG | + | chr1.4:72258123-72258142 | MS.gene09988:intron | 10.0% |
| !! | TATATATCAACAAAAATAAA+TGG | - | chr1.4:72258384-72258403 | None:intergenic | 10.0% |
| !!! | TTGAAACAATTTTTTTTTTT+TGG | + | chr1.4:72258230-72258249 | MS.gene09988:intron | 10.0% |
| !! | ATAGAATCAAAATAAAACTA+AGG | - | chr1.4:72256612-72256631 | None:intergenic | 15.0% |
| !! | CAAAAACATTTATAGATAAA+TGG | - | chr1.4:72260541-72260560 | None:intergenic | 15.0% |
| !! | CATCAAGTTTATATAATTTA+AGG | + | chr1.4:72256881-72256900 | MS.gene09988:intron | 15.0% |
| !! | TATCCTAAAACTAAATATAT+TGG | + | chr1.4:72261623-72261642 | MS.gene09988:intron | 15.0% |
| !! | TGTATATAGTATTAATTGAA+GGG | + | chr1.4:72258152-72258171 | MS.gene09988:intron | 15.0% |
| !! | TTGTATATAGTATTAATTGA+AGG | + | chr1.4:72258151-72258170 | MS.gene09988:intron | 15.0% |
| !!! | ATTTTAATATTTGGTTTTTC+AGG | + | chr1.4:72260418-72260437 | MS.gene09988:intron | 15.0% |
| !!! | TATTCTTGGATTTTAATATT+TGG | + | chr1.4:72260409-72260428 | MS.gene09988:intron | 15.0% |
| !!! | TTTATAAAAGCATTAAAACT+AGG | - | chr1.4:72259728-72259747 | None:intergenic | 15.0% |
| !! | AAAATGCAATTACAGAAATA+GGG | + | chr1.4:72260851-72260870 | MS.gene09988:intron | 20.0% |
| !! | AAACTGAAAAAGAAAACAAA+AGG | + | chr1.4:72262514-72262533 | MS.gene09988:CDS | 20.0% |
| !! | AAATTATGCTAATCAACTAT+TGG | + | chr1.4:72258088-72258107 | MS.gene09988:intron | 20.0% |
| !! | AATAGTTGATTAGCATAATT+TGG | - | chr1.4:72258089-72258108 | None:intergenic | 20.0% |
| !! | ACATAAATTTAAATAAACGC+TGG | + | chr1.4:72259139-72259158 | MS.gene09988:intron | 20.0% |
| !! | ACATAATGAAAATCAATGAA+AGG | - | chr1.4:72258499-72258518 | None:intergenic | 20.0% |
| !! | ACTTAATTAATCTACTTAAC+TGG | + | chr1.4:72257956-72257975 | MS.gene09988:intron | 20.0% |
| !! | AGACAAAAAAATTAAGCTTT+GGG | + | chr1.4:72262009-72262028 | MS.gene09988:CDS | 20.0% |
| !! | ATCAACAAAAATAAATGGAT+TGG | - | chr1.4:72258379-72258398 | None:intergenic | 20.0% |
| !! | ATGAAATTTAAGCTGAAAAT+TGG | + | chr1.4:72256829-72256848 | MS.gene09988:intron | 20.0% |
| !! | CATAATGAAAATCAATGAAA+GGG | - | chr1.4:72258498-72258517 | None:intergenic | 20.0% |
| !! | CTTAATTAATCTACTTAACT+GGG | + | chr1.4:72257957-72257976 | MS.gene09988:intron | 20.0% |
| !! | GAAATTAGAAGAATGTTATA+TGG | + | chr1.4:72259387-72259406 | MS.gene09988:intron | 20.0% |
| !! | GCGTTTATTTAAATTTATGT+AGG | - | chr1.4:72259139-72259158 | None:intergenic | 20.0% |
| !! | TAACGTATAAAGATGTATAA+GGG | - | chr1.4:72256988-72257007 | None:intergenic | 20.0% |
| !! | TAGACAAAAAAATTAAGCTT+TGG | + | chr1.4:72262008-72262027 | MS.gene09988:CDS | 20.0% |
| !! | TTAACGTATAAAGATGTATA+AGG | - | chr1.4:72256989-72257008 | None:intergenic | 20.0% |
| !! | TTACACTTAAAAAAATGTCT+GGG | + | chr1.4:72260645-72260664 | MS.gene09988:intron | 20.0% |
| !! | TTATACATCTTTATACGTTA+AGG | + | chr1.4:72256988-72257007 | MS.gene09988:intron | 20.0% |
| !!! | AAATAAATGGATTGGATTTA+TGG | - | chr1.4:72258371-72258390 | None:intergenic | 20.0% |
| !!! | AATAAATGGATTGGATTTAT+GGG | - | chr1.4:72258370-72258389 | None:intergenic | 20.0% |
| !!! | AGTTACATGTTTTATGTATT+GGG | + | chr1.4:72257422-72257441 | MS.gene09988:intron | 20.0% |
| !!! | ATTTGTGAAATTTGATTTGT+AGG | + | chr1.4:72256449-72256468 | MS.gene09988:intron | 20.0% |
| !!! | CAAAATTTTCAAAATTTCAC+AGG | + | chr1.4:72261057-72261076 | MS.gene09988:intron | 20.0% |
| !!! | CAATTTAGAATATGTAGTTA+CGG | - | chr1.4:72257234-72257253 | None:intergenic | 20.0% |
| !!! | CATCCAATATATTTAGTTTT+AGG | - | chr1.4:72261629-72261648 | None:intergenic | 20.0% |
| !!! | TAATTGCATATTTCATTTTG+TGG | + | chr1.4:72256741-72256760 | MS.gene09988:intron | 20.0% |
| !!! | TAGTTACATGTTTTATGTAT+TGG | + | chr1.4:72257421-72257440 | MS.gene09988:intron | 20.0% |
| !!! | TAGTTTTAGGATACAATAAA+TGG | - | chr1.4:72261616-72261635 | None:intergenic | 20.0% |
| !!! | TCTTTTAAGTATTTTAAGTG+AGG | - | chr1.4:72259622-72259641 | None:intergenic | 20.0% |
| !!! | TTTCATTGATTTTCATTATG+TGG | + | chr1.4:72258498-72258517 | MS.gene09988:intron | 20.0% |
| !!! | TTTGTGAAATTTGATTTGTA+GGG | + | chr1.4:72256450-72256469 | MS.gene09988:intron | 20.0% |
| !!! | TTTGTGTGAAATAATTTTTG+TGG | + | chr1.4:72256707-72256726 | MS.gene09988:intron | 20.0% |
| ! | AAAGTATACAAACAACTACA+TGG | - | chr1.4:72259532-72259551 | None:intergenic | 25.0% |
| ! | AAATGCAATTACAGAAATAG+GGG | + | chr1.4:72260852-72260871 | MS.gene09988:intron | 25.0% |
| ! | AAGAAACAGAAAACTAATGA+GGG | + | chr1.4:72262643-72262662 | MS.gene09988:CDS | 25.0% |
| ! | AATTGTCCAGATTATTTGAA+AGG | - | chr1.4:72257843-72257862 | None:intergenic | 25.0% |
| ! | ACAAGATCAATCAATAACAT+TGG | + | chr1.4:72257720-72257739 | MS.gene09988:intron | 25.0% |
| ! | AGAAAAGGTTATTATTGCAT+TGG | + | chr1.4:72258186-72258205 | MS.gene09988:intron | 25.0% |
| ! | ATATATTGGATGCATCTTTA+AGG | + | chr1.4:72261637-72261656 | MS.gene09988:intron | 25.0% |
| ! | ATATTGCCTTTCAAATAATC+TGG | + | chr1.4:72257834-72257853 | MS.gene09988:intron | 25.0% |
| ! | ATTGCTAGAGAGAAATTATA+TGG | + | chr1.4:72256504-72256523 | MS.gene09988:CDS | 25.0% |
| ! | CAAAATGCAATTACAGAAAT+AGG | + | chr1.4:72260850-72260869 | MS.gene09988:intron | 25.0% |
| ! | CAAGATCAATCAATAACATT+GGG | + | chr1.4:72257721-72257740 | MS.gene09988:intron | 25.0% |
| ! | CAAGTTTAATAAAATTCGCT+CGG | - | chr1.4:72256857-72256876 | None:intergenic | 25.0% |
| ! | CATGTTGCATTTCATTTAAT+TGG | - | chr1.4:72259179-72259198 | None:intergenic | 25.0% |
| ! | CCATAATTTAAGAACGTAAA+AGG | - | chr1.4:72259238-72259257 | None:intergenic | 25.0% |
| ! | CTTAAAAATTAATGCAACCT+CGG | - | chr1.4:72261387-72261406 | None:intergenic | 25.0% |
| ! | CTTACACAACTTAAATAATC+TGG | - | chr1.4:72258313-72258332 | None:intergenic | 25.0% |
| ! | CTTACACTTAAAAAAATGTC+TGG | + | chr1.4:72260644-72260663 | MS.gene09988:intron | 25.0% |
| ! | GAAGTAAAGTCTATTGTATA+CGG | - | chr1.4:72259945-72259964 | None:intergenic | 25.0% |
| ! | GGTATCCATACATATATAAT+CGG | + | chr1.4:72261078-72261097 | MS.gene09988:intron | 25.0% |
| ! | GTATCCATACATATATAATC+GGG | + | chr1.4:72261079-72261098 | MS.gene09988:CDS | 25.0% |
| ! | TAAATAATCTGGACAATTGT+AGG | - | chr1.4:72258302-72258321 | None:intergenic | 25.0% |
| ! | TAAGGATAATTACTCTAACA+AGG | + | chr1.4:72256899-72256918 | MS.gene09988:intron | 25.0% |
| ! | TACACTTAAAAAAATGTCTG+GGG | + | chr1.4:72260646-72260665 | MS.gene09988:intron | 25.0% |
| ! | TATATTGGATGCATCTTTAA+GGG | + | chr1.4:72261638-72261657 | MS.gene09988:intron | 25.0% |
| ! | TGAAAAACTTCGCTAATATT+TGG | - | chr1.4:72257916-72257935 | None:intergenic | 25.0% |
| ! | TGAGAAATTAAAGAGAGAAA+GGG | - | chr1.4:72258893-72258912 | None:intergenic | 25.0% |
| ! | TTCAGAAATCAGTTTAATAG+AGG | + | chr1.4:72258698-72258717 | MS.gene09988:intron | 25.0% |
| ! | TTGAGAAATTAAAGAGAGAA+AGG | - | chr1.4:72258894-72258913 | None:intergenic | 25.0% |
| ! | TTTCAATAACTTGAATTGCT+TGG | + | chr1.4:72259359-72259378 | MS.gene09988:intron | 25.0% |
| !! | ATAACTAACCTTTTAGATTG+TGG | + | chr1.4:72256925-72256944 | MS.gene09988:intron | 25.0% |
| !! | ATGCTTGTTAATAGTATCTA+AGG | + | chr1.4:72257611-72257630 | MS.gene09988:intron | 25.0% |
| !! | ATGTATTGGGTTTCTAATTT+TGG | + | chr1.4:72257435-72257454 | MS.gene09988:intron | 25.0% |
| !! | CCTTTTACGTTCTTAAATTA+TGG | + | chr1.4:72259235-72259254 | MS.gene09988:intron | 25.0% |
| !! | TGATTCGAGTTACTTTAAAT+CGG | + | chr1.4:72257252-72257271 | MS.gene09988:intron | 25.0% |
| !! | TGTTAATAGTATCTAAGGTT+AGG | + | chr1.4:72257616-72257635 | MS.gene09988:intron | 25.0% |
| !! | TTCAAAATGAATGTCGTTTA+AGG | + | chr1.4:72258011-72258030 | MS.gene09988:intron | 25.0% |
| !!! | AAAGTGTGTGGTTTTTTTTT+TGG | + | chr1.4:72256657-72256676 | MS.gene09988:intron | 25.0% |
| !!! | AAATGCATTGATTAAAAGAG+AGG | + | chr1.4:72258053-72258072 | MS.gene09988:intron | 25.0% |
| !!! | AAGGAATAATAAGAAGCATT+CGG | - | chr1.4:72256267-72256286 | None:intergenic | 25.0% |
| !!! | ATTAGTTTTCTGTTTCTTCT+TGG | - | chr1.4:72262641-72262660 | None:intergenic | 25.0% |
| !!! | TACTTGTCTTTCTTATTTTG+TGG | + | chr1.4:72260894-72260913 | MS.gene09988:intron | 25.0% |
| !!! | TTGAAAATTTTGAAGTCACT+CGG | - | chr1.4:72261049-72261068 | None:intergenic | 25.0% |
| !!! | TTTGAACTTTGAAGTAAAAG+AGG | - | chr1.4:72260834-72260853 | None:intergenic | 25.0% |
| AAATATTCATACCTGTTCAG+TGG | - | chr1.4:72256062-72256081 | None:intergenic | 30.0% | |
| AAATTCTTAAGCACTTGAAC+TGG | - | chr1.4:72259492-72259511 | None:intergenic | 30.0% | |
| AAGATAATATCACACATCCA+AGG | - | chr1.4:72257800-72257819 | None:intergenic | 30.0% | |
| AAGCAGAAATTACTTTCTCT+GGG | - | chr1.4:72260501-72260520 | None:intergenic | 30.0% | |
| AATGAAAATAAGCACACTGT+AGG | - | chr1.4:72261547-72261566 | None:intergenic | 30.0% | |
| ACAATAGACTTTACTTCAAG+TGG | + | chr1.4:72259948-72259967 | MS.gene09988:CDS | 30.0% | |
| ACACTTAAAAAAATGTCTGG+GGG | + | chr1.4:72260647-72260666 | MS.gene09988:intron | 30.0% | |
| ACTAGTACAAAGTTACTACA+AGG | - | chr1.4:72259778-72259797 | None:intergenic | 30.0% | |
| AGAAGATGATTCACAATTGT+GGG | - | chr1.4:72257118-72257137 | None:intergenic | 30.0% | |
| AGAATGGATCAGTACAATTA+GGG | + | chr1.4:72260569-72260588 | MS.gene09988:intron | 30.0% | |
| AGCTATGTCTTTCAATGTAT+TGG | + | chr1.4:72256138-72256157 | MS.gene09988:intron | 30.0% | |
| AGGAATGTACTTAGTATAAC+AGG | - | chr1.4:72257176-72257195 | None:intergenic | 30.0% | |
| AGGGTACAATTGAAAAGAAA+AGG | + | chr1.4:72258171-72258190 | MS.gene09988:intron | 30.0% | |
| ATATTGGATGCATCTTTAAG+GGG | + | chr1.4:72261639-72261658 | MS.gene09988:intron | 30.0% | |
| ATGACTCATTCAATGGTTAA+GGG | + | chr1.4:72262178-72262197 | MS.gene09988:CDS | 30.0% | |
| ATGATGCTAGAAATGTTTCT+TGG | + | chr1.4:72261171-72261190 | MS.gene09988:intron | 30.0% | |
| ATGGAATTAAACCCTTACAA+CGG | + | chr1.4:72261839-72261858 | MS.gene09988:CDS | 30.0% | |
| CAAAATATATTTGCAGAGCT+TGG | + | chr1.4:72259918-72259937 | MS.gene09988:intron | 30.0% | |
| CAAATAATCTGGACAATTGT+AGG | + | chr1.4:72257845-72257864 | MS.gene09988:intron | 30.0% | |
| CAAATTGTCTTTCTGAATAC+TGG | + | chr1.4:72261472-72261491 | MS.gene09988:intron | 30.0% | |
| CAAGCATAATTAATAGTACC+TGG | - | chr1.4:72257598-72257617 | None:intergenic | 30.0% | |
| CAATATGATATTACTTTGCC+AGG | + | chr1.4:72257577-72257596 | MS.gene09988:CDS | 30.0% | |
| CACACTTTACAATAATTCAC+TGG | - | chr1.4:72256645-72256664 | None:intergenic | 30.0% | |
| CTGGCAAAGTAATATCATAT+TGG | - | chr1.4:72257579-72257598 | None:intergenic | 30.0% | |
| CTTTATCAGGATGTTACAAT+GGG | + | chr1.4:72261770-72261789 | MS.gene09988:CDS | 30.0% | |
| GAAAGGCAATATAAATGACT+AGG | - | chr1.4:72257826-72257845 | None:intergenic | 30.0% | |
| GAAGAAACAGAAAACTAATG+AGG | + | chr1.4:72262642-72262661 | MS.gene09988:CDS | 30.0% | |
| GAGAAATTAAAGAGAGAAAG+GGG | - | chr1.4:72258892-72258911 | None:intergenic | 30.0% | |
| GTATAAAGATGTATAAGGGT+AGG | - | chr1.4:72256984-72257003 | None:intergenic | 30.0% | |
| GTGAATTATTGTAAAGTGTG+TGG | + | chr1.4:72256645-72256664 | MS.gene09988:intron | 30.0% | |
| GTTATACTAAGTACATTCCT+TGG | + | chr1.4:72257176-72257195 | MS.gene09988:intron | 30.0% | |
| TAATTTCTCAAGATAACCAC+TGG | + | chr1.4:72258903-72258922 | MS.gene09988:intron | 30.0% | |
| TACAATTAGGGAAATAAGAG+TGG | + | chr1.4:72260581-72260600 | MS.gene09988:intron | 30.0% | |
| TACTACAAGGATAAAGTGAA+AGG | - | chr1.4:72259765-72259784 | None:intergenic | 30.0% | |
| TACTTTAATGATGCGAAATG+TGG | - | chr1.4:72260775-72260794 | None:intergenic | 30.0% | |
| TAGAAGATGATTCACAATTG+TGG | - | chr1.4:72257119-72257138 | None:intergenic | 30.0% | |
| TAGAATGGATCAGTACAATT+AGG | + | chr1.4:72260568-72260587 | MS.gene09988:intron | 30.0% | |
| TCTTTATCAGGATGTTACAA+TGG | + | chr1.4:72261769-72261788 | MS.gene09988:CDS | 30.0% | |
| TCTTTGCTTCTATTCAAACA+TGG | - | chr1.4:72258792-72258811 | None:intergenic | 30.0% | |
| TTCACACTGCTTAATTTCTA+GGG | + | chr1.4:72256080-72256099 | MS.gene09988:intron | 30.0% | |
| TTTCACACTGCTTAATTTCT+AGG | + | chr1.4:72256079-72256098 | MS.gene09988:intron | 30.0% | |
| ! | AAATTGTTTCGAGTGAAGAA+AGG | - | chr1.4:72259856-72259875 | None:intergenic | 30.0% |
| ! | GAAAAGCTAATTTTCCTATC+TGG | - | chr1.4:72262207-72262226 | None:intergenic | 30.0% |
| ! | TAAACTCCAAAGTATTTGCA+TGG | - | chr1.4:72262072-72262091 | None:intergenic | 30.0% |
| ! | TGTTTTTCTTTTCCTTTTCC+AGG | + | chr1.4:72261670-72261689 | MS.gene09988:intron | 30.0% |
| !! | AAACGACACTCATTTTGAAA+CGG | + | chr1.4:72258256-72258275 | MS.gene09988:intron | 30.0% |
| !! | AACATTTCTAGCATCATCAA+TGG | - | chr1.4:72261168-72261187 | None:intergenic | 30.0% |
| !! | ACTTTGGAGTTTAGTCAAAA+AGG | + | chr1.4:72262079-72262098 | MS.gene09988:CDS | 30.0% |
| !! | GTAATTTGTTGTAGTTTGGA+GGG | - | chr1.4:72258661-72258680 | None:intergenic | 30.0% |
| !! | GTTGATTTATCCAATGCTTT+TGG | + | chr1.4:72258976-72258995 | MS.gene09988:intron | 30.0% |
| !! | TGTTTTTGTTCTCTGTAGAA+TGG | + | chr1.4:72260553-72260572 | MS.gene09988:intron | 30.0% |
| !! | TTGGGTAATTTGTTGTAGTT+TGG | - | chr1.4:72258665-72258684 | None:intergenic | 30.0% |
| !!! | CTAGTGGGTTTTTTATTTGA+CGG | + | chr1.4:72261328-72261347 | MS.gene09988:intron | 30.0% |
| !!! | CTTAATTTTTTTGTCTACCC+CGG | - | chr1.4:72262005-72262024 | None:intergenic | 30.0% |
| !!! | GACATTCATTTTGAAACAGA+GGG | - | chr1.4:72258006-72258025 | None:intergenic | 30.0% |
| !!! | TAGTGGGTTTTTTATTTGAC+GGG | + | chr1.4:72261329-72261348 | MS.gene09988:intron | 30.0% |
| !!! | TGTGTGGTTTTTTTTTTGGT+GGG | + | chr1.4:72256661-72256680 | MS.gene09988:intron | 30.0% |
| !!! | TTCTAATTTTGGTTATGCAG+TGG | + | chr1.4:72257446-72257465 | MS.gene09988:intron | 30.0% |
| AAAACCAAACAAAGCAAGCT+TGG | - | chr1.4:72260067-72260086 | None:intergenic | 35.0% | |
| AAAGACGTATAGGATTAAGC+AGG | + | chr1.4:72257513-72257532 | MS.gene09988:CDS | 35.0% | |
| AACAAAAACAGCACTGTTTG+TGG | - | chr1.4:72258753-72258772 | None:intergenic | 35.0% | |
| AACTGCCAAAATCTTTACAG+CGG | + | chr1.4:72262671-72262690 | MS.gene09988:CDS | 35.0% | |
| AACTTCTATCTACTTCTAGC+AGG | - | chr1.4:72259077-72259096 | None:intergenic | 35.0% | |
| AAGGCATAGAAAAGACGTAT+AGG | + | chr1.4:72257503-72257522 | MS.gene09988:CDS | 35.0% | |
| AAGGTACATGACTCATTCAA+TGG | + | chr1.4:72262171-72262190 | MS.gene09988:CDS | 35.0% | |
| AAGTAGATATCTCAAGCTCA+AGG | + | chr1.4:72257551-72257570 | MS.gene09988:CDS | 35.0% | |
| ACTTCGCTAATATTTGGTAG+AGG | - | chr1.4:72257910-72257929 | None:intergenic | 35.0% | |
| AGAAAAAAAGCTGACTGGAA+GGG | - | chr1.4:72258847-72258866 | None:intergenic | 35.0% | |
| AGAAAGTAATTTCTGCTTCC+TGG | + | chr1.4:72260503-72260522 | MS.gene09988:intron | 35.0% | |
| AGAACCCAACTTTGATTCAT+GGG | + | chr1.4:72262297-72262316 | MS.gene09988:CDS | 35.0% | |
| AGGAGAAGCTGCTAATTTAA+AGG | + | chr1.4:72256345-72256364 | MS.gene09988:CDS | 35.0% | |
| AGGCAATATAAATGACTAGG+AGG | - | chr1.4:72257823-72257842 | None:intergenic | 35.0% | |
| AGTGAGGACTTATCAACAAT+AGG | - | chr1.4:72259606-72259625 | None:intergenic | 35.0% | |
| ATACCAAGTGATCATCTCAT+AGG | + | chr1.4:72259557-72259576 | MS.gene09988:intron | 35.0% | |
| ATGACATAGCATCTTGACAA+GGG | - | chr1.4:72261927-72261946 | None:intergenic | 35.0% | |
| CAAGGATAAAGTGAAAGGAA+AGG | - | chr1.4:72259760-72259779 | None:intergenic | 35.0% | |
| CATAGCGTTAATATTGACCA+AGG | - | chr1.4:72257196-72257215 | None:intergenic | 35.0% | |
| CATCTTGACCACAATCTAAA+AGG | - | chr1.4:72256936-72256955 | None:intergenic | 35.0% | |
| CATGACTCATTCAATGGTTA+AGG | + | chr1.4:72262177-72262196 | MS.gene09988:CDS | 35.0% | |
| CCATACATATATAATCGGGA+CGG | + | chr1.4:72261083-72261102 | MS.gene09988:CDS | 35.0% | |
| CTACCTAGAAGTTACTGAAA+CGG | - | chr1.4:72257153-72257172 | None:intergenic | 35.0% | |
| CTGAATGACAGCAAGAAATT+GGG | - | chr1.4:72258683-72258702 | None:intergenic | 35.0% | |
| GAAAACAAAAGGAAGAAGCA+AGG | + | chr1.4:72262525-72262544 | MS.gene09988:CDS | 35.0% | |
| GAAGCAGAAATTACTTTCTC+TGG | - | chr1.4:72260502-72260521 | None:intergenic | 35.0% | |
| GAAGTAAAAGAGGAAGCAAA+TGG | - | chr1.4:72260824-72260843 | None:intergenic | 35.0% | |
| GCTGTTTAGGTGTTTCAAAT+GGG | - | chr1.4:72262330-72262349 | None:intergenic | 35.0% | |
| GTGCTTCGTAAAGTTATTCT+TGG | + | chr1.4:72260395-72260414 | MS.gene09988:intron | 35.0% | |
| GTTTAATCTTGTGTAACTCG+TGG | + | chr1.4:72257352-72257371 | MS.gene09988:intron | 35.0% | |
| TAACCTATGAGATGATCACT+TGG | - | chr1.4:72259563-72259582 | None:intergenic | 35.0% | |
| TAATATCACACATCCAAGGT+TGG | - | chr1.4:72257796-72257815 | None:intergenic | 35.0% | |
| TAGTGACAGTGTGTGAAAAA+AGG | + | chr1.4:72257330-72257349 | MS.gene09988:intron | 35.0% | |
| TCAAGATGCTATGTCATCAA+GGG | + | chr1.4:72261930-72261949 | MS.gene09988:CDS | 35.0% | |
| TCATCATGTCCATAATTGCT+AGG | - | chr1.4:72260007-72260026 | None:intergenic | 35.0% | |
| TCTGAATGACAGCAAGAAAT+TGG | - | chr1.4:72258684-72258703 | None:intergenic | 35.0% | |
| TGATGCGAAATGTGGTATTT+CGG | - | chr1.4:72260767-72260786 | None:intergenic | 35.0% | |
| TGGAATTAAACCCTTACAAC+GGG | + | chr1.4:72261840-72261859 | MS.gene09988:CDS | 35.0% | |
| TGGCTTCTACCAACAAATTT+GGG | + | chr1.4:72261741-72261760 | MS.gene09988:CDS | 35.0% | |
| TTACAATGGGTACAATAGCT+GGG | + | chr1.4:72261783-72261802 | MS.gene09988:CDS | 35.0% | |
| TTCACACACAGGAAACAAAT+GGG | + | chr1.4:72260320-72260339 | MS.gene09988:intron | 35.0% | |
| TTCAGAAAGACAATTTGACG+CGG | - | chr1.4:72261469-72261488 | None:intergenic | 35.0% | |
| TTGATCCACACATCAAAATC+AGG | - | chr1.4:72261433-72261452 | None:intergenic | 35.0% | |
| TTGCTGATGAACTAGAACTT+AGG | + | chr1.4:72256305-72256324 | MS.gene09988:CDS | 35.0% | |
| TTGTCTAGTATCCTTATTCC+AGG | + | chr1.4:72262268-72262287 | MS.gene09988:CDS | 35.0% | |
| TTTCACACACAGGAAACAAA+TGG | + | chr1.4:72260319-72260338 | MS.gene09988:intron | 35.0% | |
| ! | ACAAACCGCTGTAAAGATTT+TGG | - | chr1.4:72262679-72262698 | None:intergenic | 35.0% |
| ! | ATTCCAACATCCAAAAGCAT+TGG | - | chr1.4:72258989-72259008 | None:intergenic | 35.0% |
| ! | ATTTGGGATGCTTCTTTATC+AGG | + | chr1.4:72261757-72261776 | MS.gene09988:CDS | 35.0% |
| ! | CTTTTAGATTGTGGTCAAGA+TGG | + | chr1.4:72256934-72256953 | MS.gene09988:intron | 35.0% |
| ! | TAAACCAAGCTTGCTTTGTT+TGG | + | chr1.4:72260060-72260079 | MS.gene09988:intron | 35.0% |
| ! | TAGTTAGTGTTGAGAACCAA+GGG | + | chr1.4:72257277-72257296 | MS.gene09988:intron | 35.0% |
| ! | TATCCAATGCTTTTGGATGT+TGG | + | chr1.4:72258983-72259002 | MS.gene09988:intron | 35.0% |
| ! | TATTCCTTACATCGTTTTGC+AGG | + | chr1.4:72256279-72256298 | MS.gene09988:intron | 35.0% |
| ! | TCTGGAAAACCATTTTCTTC+TGG | + | chr1.4:72261721-72261740 | MS.gene09988:CDS | 35.0% |
| ! | TGAATTTTCTGCTCCAAGTA+AGG | - | chr1.4:72262601-72262620 | None:intergenic | 35.0% |
| ! | TGGATTGGATTTATGGGATA+GGG | - | chr1.4:72258364-72258383 | None:intergenic | 35.0% |
| ! | TGTCAGAAAGCATGAATAAC+AGG | - | chr1.4:72260717-72260736 | None:intergenic | 35.0% |
| ! | TGTTTGTGGCTATAATGGAA+AGG | - | chr1.4:72258739-72258758 | None:intergenic | 35.0% |
| ! | TTAGTTAGTGTTGAGAACCA+AGG | + | chr1.4:72257276-72257295 | MS.gene09988:intron | 35.0% |
| ! | TTCATATATCCAGGTTCTGA+GGG | + | chr1.4:72262123-72262142 | MS.gene09988:CDS | 35.0% |
| ! | TTTAGAGTTGAACCATCCAT+TGG | + | chr1.4:72261220-72261239 | MS.gene09988:intron | 35.0% |
| !! | AAATTAAGCTTTGGGACTTG+AGG | + | chr1.4:72262017-72262036 | MS.gene09988:CDS | 35.0% |
| !! | AAGAAGCATCCCAAATTTGT+TGG | - | chr1.4:72261753-72261772 | None:intergenic | 35.0% |
| !! | ATGGATTGGATTTATGGGAT+AGG | - | chr1.4:72258365-72258384 | None:intergenic | 35.0% |
| !! | GGTAATTTGTTGTAGTTTGG+AGG | - | chr1.4:72258662-72258681 | None:intergenic | 35.0% |
| !! | TACAAATTGTTGAAGCACTG+TGG | + | chr1.4:72259657-72259676 | MS.gene09988:intron | 35.0% |
| !! | TGGTAATGGTTCATATATCC+AGG | + | chr1.4:72262114-72262133 | MS.gene09988:CDS | 35.0% |
| !!! | AGTTGTTTTAGTGCTTCTCT+CGG | - | chr1.4:72260224-72260243 | None:intergenic | 35.0% |
| !!! | CGACATTCATTTTGAAACAG+AGG | - | chr1.4:72258007-72258026 | None:intergenic | 35.0% |
| !!! | CTACTGGATTTCGTTTTTTG+AGG | + | chr1.4:72257302-72257321 | MS.gene09988:intron | 35.0% |
| !!! | GCAATTGCATCTTGCTTTTT+AGG | - | chr1.4:72262565-72262584 | None:intergenic | 35.0% |
| !!! | GGATTTCGTTTTTTGAGGAT+TGG | + | chr1.4:72257307-72257326 | MS.gene09988:intron | 35.0% |
| !!! | GTGTGTGGTTTTTTTTTTGG+TGG | + | chr1.4:72256660-72256679 | MS.gene09988:intron | 35.0% |
| AAAATCAGGCGTGTGAATTG+TGG | - | chr1.4:72261419-72261438 | None:intergenic | 40.0% | |
| AAACCTTGTGAGATTGTTCG+CGG | + | chr1.4:72260944-72260963 | MS.gene09988:intron | 40.0% | |
| AAAGAAACAACCCCGTTGTA+AGG | - | chr1.4:72261854-72261873 | None:intergenic | 40.0% | |
| AAATGGTAGAACAGCAAACC+AGG | - | chr1.4:72260524-72260543 | None:intergenic | 40.0% | |
| AACTGGATGGTTCAACTCTA+AGG | - | chr1.4:72261299-72261318 | None:intergenic | 40.0% | |
| AAGAAACAACCCCGTTGTAA+GGG | - | chr1.4:72261853-72261872 | None:intergenic | 40.0% | |
| AAGCTCGATATTTGCTTGCA+CGG | + | chr1.4:72256786-72256805 | MS.gene09988:intron | 40.0% | |
| ACCAGACCATGCAAATACTT+TGG | + | chr1.4:72262063-72262082 | MS.gene09988:CDS | 40.0% | |
| ACCTAAACAGCGAAGAGAAA+AGG | + | chr1.4:72262339-72262358 | MS.gene09988:CDS | 40.0% | |
| ACTGGATGGTTCAACTCTAA+GGG | - | chr1.4:72261298-72261317 | None:intergenic | 40.0% | |
| AGCACTGTTTGTGGCTATAA+TGG | - | chr1.4:72258744-72258763 | None:intergenic | 40.0% | |
| AGGGAAATAAGAGTGGCTTA+GGG | + | chr1.4:72260588-72260607 | MS.gene09988:intron | 40.0% | |
| ATAGCTGGGAAATTTCGAAC+TGG | + | chr1.4:72261797-72261816 | MS.gene09988:CDS | 40.0% | |
| ATGAATAACAGGCAGAGAAG+TGG | - | chr1.4:72260706-72260725 | None:intergenic | 40.0% | |
| ATGCAATTGCCAATGCAAAG+AGG | + | chr1.4:72262575-72262594 | MS.gene09988:CDS | 40.0% | |
| ATGGGCCTTACATCTAATGT+CGG | + | chr1.4:72260338-72260357 | MS.gene09988:intron | 40.0% | |
| ATGGTTAAGGGATACCAGAT+AGG | + | chr1.4:72262190-72262209 | MS.gene09988:CDS | 40.0% | |
| ATGTCCTGCAAAACGATGTA+AGG | - | chr1.4:72256286-72256305 | None:intergenic | 40.0% | |
| ATGTTGGAATGTGAGTGCTT+GGG | + | chr1.4:72258999-72259018 | MS.gene09988:intron | 40.0% | |
| ATTAAGCAGGAGACAATAGC+CGG | + | chr1.4:72257526-72257545 | MS.gene09988:CDS | 40.0% | |
| ATTCATACCTGTTCAGTGGA+AGG | - | chr1.4:72256058-72256077 | None:intergenic | 40.0% | |
| CAAGCAGTTAACCAACCTTT+AGG | - | chr1.4:72261124-72261143 | None:intergenic | 40.0% | |
| CCAGTTACATATGTGCTAGT+GGG | + | chr1.4:72261313-72261332 | MS.gene09988:intron | 40.0% | |
| CCGTCCCGATTATATATGTA+TGG | - | chr1.4:72261086-72261105 | None:intergenic | 40.0% | |
| CGCTGTTTAGGTGTTTCAAA+TGG | - | chr1.4:72262331-72262350 | None:intergenic | 40.0% | |
| CTAGCACATATGTAACTGGA+TGG | - | chr1.4:72261312-72261331 | None:intergenic | 40.0% | |
| CTAGGCATAGGACATTCAAT+GGG | + | chr1.4:72262244-72262263 | MS.gene09988:CDS | 40.0% | |
| CTGGCTTCTACCAACAAATT+TGG | + | chr1.4:72261740-72261759 | MS.gene09988:CDS | 40.0% | |
| CTGTGCTCAGGCATTTATTA+GGG | - | chr1.4:72259112-72259131 | None:intergenic | 40.0% | |
| CTTCCACATAGTAACTGTAC+CGG | - | chr1.4:72261888-72261907 | None:intergenic | 40.0% | |
| CTTCTCTCGGTAGCTTAAAT+TGG | - | chr1.4:72260211-72260230 | None:intergenic | 40.0% | |
| GAAATCAACCAATCCAACCT+TGG | + | chr1.4:72257780-72257799 | MS.gene09988:intron | 40.0% | |
| GAGAAAAAAAGCTGACTGGA+AGG | - | chr1.4:72258848-72258867 | None:intergenic | 40.0% | |
| GAGAACCCAACTTTGATTCA+TGG | + | chr1.4:72262296-72262315 | MS.gene09988:CDS | 40.0% | |
| GATACTCATCATGCCTTCTT+TGG | + | chr1.4:72260149-72260168 | MS.gene09988:intron | 40.0% | |
| GATGACATAGCATCTTGACA+AGG | - | chr1.4:72261928-72261947 | None:intergenic | 40.0% | |
| GATGCGAAATGTGGTATTTC+GGG | - | chr1.4:72260766-72260785 | None:intergenic | 40.0% | |
| GCAACCCATGAATCAAAGTT+GGG | - | chr1.4:72262304-72262323 | None:intergenic | 40.0% | |
| GCTTGAGATATCTACTTCAC+CGG | - | chr1.4:72257548-72257567 | None:intergenic | 40.0% | |
| GGAATTAAACCCTTACAACG+GGG | + | chr1.4:72261841-72261860 | MS.gene09988:CDS | 40.0% | |
| GTCAAGATGCTATGTCATCA+AGG | + | chr1.4:72261929-72261948 | MS.gene09988:CDS | 40.0% | |
| GTTACAATGGGTACAATAGC+TGG | + | chr1.4:72261782-72261801 | MS.gene09988:CDS | 40.0% | |
| GTTCATATATCCAGGTTCTG+AGG | + | chr1.4:72262122-72262141 | MS.gene09988:CDS | 40.0% | |
| TAGACTTTACTTCAAGTGGC+CGG | + | chr1.4:72259952-72259971 | MS.gene09988:CDS | 40.0% | |
| TAGCCGTTTCAGTAACTTCT+AGG | + | chr1.4:72257147-72257166 | MS.gene09988:intron | 40.0% | |
| TAGCGAAGGAGGTTATATAG+AGG | + | chr1.4:72257477-72257496 | MS.gene09988:CDS | 40.0% | |
| TAGGGAAATAAGAGTGGCTT+AGG | + | chr1.4:72260587-72260606 | MS.gene09988:intron | 40.0% | |
| TATTATCCACCATTCATCCG+AGG | + | chr1.4:72261367-72261386 | MS.gene09988:intron | 40.0% | |
| TCACTCTAATGGCCACTTAA+TGG | + | chr1.4:72261973-72261992 | MS.gene09988:CDS | 40.0% | |
| TCATGTCCATAATTGCTAGG+TGG | - | chr1.4:72260004-72260023 | None:intergenic | 40.0% | |
| TCCAGTATCAAGCTGCAAAA+AGG | + | chr1.4:72259447-72259466 | MS.gene09988:intron | 40.0% | |
| TCCAGTTACATATGTGCTAG+TGG | + | chr1.4:72261312-72261331 | MS.gene09988:intron | 40.0% | |
| TCTAGGCATAGGACATTCAA+TGG | + | chr1.4:72262243-72262262 | MS.gene09988:CDS | 40.0% | |
| TCTATATAACCTCCTTCGCT+AGG | - | chr1.4:72257478-72257497 | None:intergenic | 40.0% | |
| TCTCTCCGACATTAGATGTA+AGG | - | chr1.4:72260346-72260365 | None:intergenic | 40.0% | |
| TGACATAGCATCTTGACAAG+GGG | - | chr1.4:72261926-72261945 | None:intergenic | 40.0% | |
| TGCAACCCATGAATCAAAGT+TGG | - | chr1.4:72262305-72262324 | None:intergenic | 40.0% | |
| TGGTAGAAGCCAGAAGAAAA+TGG | - | chr1.4:72261733-72261752 | None:intergenic | 40.0% | |
| TTAAGCACTTGAACTGGTAG+TGG | - | chr1.4:72259486-72259505 | None:intergenic | 40.0% | |
| TTAATGCAACCTCGGATGAA+TGG | - | chr1.4:72261379-72261398 | None:intergenic | 40.0% | |
| TTGGGACTTGAGGAAATTTG+AGG | + | chr1.4:72262027-72262046 | MS.gene09988:CDS | 40.0% | |
| ! | AAGAAGAAAGAGTGCATGAG+AGG | - | chr1.4:72258464-72258483 | None:intergenic | 40.0% |
| ! | ACCTTTTTGCAGCTTGATAC+TGG | - | chr1.4:72259451-72259470 | None:intergenic | 40.0% |
| ! | GGGAAATTTCGAACTGGTTT+AGG | + | chr1.4:72261803-72261822 | MS.gene09988:CDS | 40.0% |
| ! | GTTTTGCAGCCAGATAACTT+GGG | - | chr1.4:72259265-72259284 | None:intergenic | 40.0% |
| ! | TCCAAAGTATTTGCATGGTC+TGG | - | chr1.4:72262067-72262086 | None:intergenic | 40.0% |
| ! | TCCTTTTCTCTTCGCTGTTT+AGG | - | chr1.4:72262343-72262362 | None:intergenic | 40.0% |
| ! | TTTAGGACGCACAAATGTGA+TGG | + | chr1.4:72261820-72261839 | MS.gene09988:CDS | 40.0% |
| !! | AGCACTGGCAGAAAAACAAA+AGG | - | chr1.4:72258946-72258965 | None:intergenic | 40.0% |
| !! | AGGTCAAAGAAGTATCTCAG+AGG | + | chr1.4:72256325-72256344 | MS.gene09988:CDS | 40.0% |
| !! | GGATGAATGGTGGATAATAC+AGG | - | chr1.4:72261366-72261385 | None:intergenic | 40.0% |
| !! | TACAACGGGGTTGTTTCTTT+AGG | + | chr1.4:72261854-72261873 | MS.gene09988:CDS | 40.0% |
| !! | TCAGTGGAAGGCTTGTTATT+TGG | - | chr1.4:72256046-72256065 | None:intergenic | 40.0% |
| !! | TCTTTCTGAATACTGGCTTG+AGG | + | chr1.4:72261479-72261498 | MS.gene09988:intron | 40.0% |
| !! | TGAAGATACGCAGCTCTAAA+TGG | - | chr1.4:72260181-72260200 | None:intergenic | 40.0% |
| !! | TTGTTTTTCTGCCAGTGCTT+CGG | + | chr1.4:72258947-72258966 | MS.gene09988:intron | 40.0% |
| !!! | GACACTCATTTTGAAACGGA+GGG | + | chr1.4:72258260-72258279 | MS.gene09988:intron | 40.0% |
| !!! | TTTTGAAACGGAGGGAGTAT+TGG | + | chr1.4:72258268-72258287 | MS.gene09988:intron | 40.0% |
| AAAAAAATGTCTGGGGGCAG+AGG | + | chr1.4:72260653-72260672 | MS.gene09988:intron | 45.0% | |
| AAACCAAACCACTGTACTGG+AGG | + | chr1.4:72259281-72259300 | MS.gene09988:intron | 45.0% | |
| AAGAGAAACTGTGCGTGATG+TGG | + | chr1.4:72260442-72260461 | MS.gene09988:CDS | 45.0% | |
| ACAAAAGGAAGAAGCAAGGC+TGG | + | chr1.4:72262529-72262548 | MS.gene09988:CDS | 45.0% | |
| ACAAGAGATAGAGGTCAGGA+TGG | + | chr1.4:72262462-72262481 | MS.gene09988:CDS | 45.0% | |
| ACGAAATCCAGTAGATCCCT+TGG | - | chr1.4:72257296-72257315 | None:intergenic | 45.0% | |
| AGAGTTGAACCATCCATTGG+TGG | + | chr1.4:72261223-72261242 | MS.gene09988:intron | 45.0% | |
| AGTATCCTTATTCCAGGAGC+AGG | + | chr1.4:72262274-72262293 | MS.gene09988:CDS | 45.0% | |
| ATCAACCAGTGCTCAGACAT+TGG | + | chr1.4:72259041-72259060 | MS.gene09988:intron | 45.0% | |
| ATCTACTTCTAGCAGGAGCT+GGG | - | chr1.4:72259070-72259089 | None:intergenic | 45.0% | |
| ATGCCTAGAACGTCTTCGTA+TGG | - | chr1.4:72262232-72262251 | None:intergenic | 45.0% | |
| CAAGTAAGGCCTCTTTGCAT+TGG | - | chr1.4:72262587-72262606 | None:intergenic | 45.0% | |
| CAATGCAAAGAGGCCTTACT+TGG | + | chr1.4:72262585-72262604 | MS.gene09988:CDS | 45.0% | |
| CACAATTGTGGGTAACTGCA+AGG | - | chr1.4:72257107-72257126 | None:intergenic | 45.0% | |
| CACAGAGCTTCATTGCCTAA+AGG | + | chr1.4:72261106-72261125 | MS.gene09988:CDS | 45.0% | |
| CCCACTAGCACATATGTAAC+TGG | - | chr1.4:72261316-72261335 | None:intergenic | 45.0% | |
| CCTAATAAATGCCTGAGCAC+AGG | + | chr1.4:72259110-72259129 | MS.gene09988:intron | 45.0% | |
| CCTGTGCTCAGGCATTTATT+AGG | - | chr1.4:72259113-72259132 | None:intergenic | 45.0% | |
| CTCATCATGCCTTCTTTGGA+CGG | + | chr1.4:72260153-72260172 | MS.gene09988:intron | 45.0% | |
| CTGGTGCACAGAACTATTCA+AGG | + | chr1.4:72262152-72262171 | MS.gene09988:CDS | 45.0% | |
| GACCACCAATAGCCATATAC+CGG | - | chr1.4:72259974-72259993 | None:intergenic | 45.0% | |
| GAGCTTCATTGCCTAAAGGT+TGG | + | chr1.4:72261110-72261129 | MS.gene09988:intron | 45.0% | |
| GAGTTGAACCATCCATTGGT+GGG | + | chr1.4:72261224-72261243 | MS.gene09988:intron | 45.0% | |
| GATGAATCTGAGCCTGATCA+GGG | + | chr1.4:72260022-72260041 | MS.gene09988:CDS | 45.0% | |
| GATGTTGGAATGTGAGTGCT+TGG | + | chr1.4:72258998-72259017 | MS.gene09988:intron | 45.0% | |
| GCAAAACCAAACCACTGTAC+TGG | + | chr1.4:72259278-72259297 | MS.gene09988:intron | 45.0% | |
| GCTAACTGCACAAGAGATAG+AGG | + | chr1.4:72262453-72262472 | MS.gene09988:CDS | 45.0% | |
| GCTCTGGCATTTCACTCTAA+TGG | + | chr1.4:72261962-72261981 | MS.gene09988:CDS | 45.0% | |
| GGAGGTTATATAGAGGCTGA+AGG | + | chr1.4:72257484-72257503 | MS.gene09988:CDS | 45.0% | |
| GGCAGAGAAAAAAAGCTGAC+TGG | - | chr1.4:72258852-72258871 | None:intergenic | 45.0% | |
| GTGCAAGCAAATATCGAGCT+TGG | - | chr1.4:72256787-72256806 | None:intergenic | 45.0% | |
| GTGGTGAATTATCGTTGAGC+CGG | + | chr1.4:72256760-72256779 | MS.gene09988:intron | 45.0% | |
| TAAATGGTCCCGTCCAAAGA+AGG | - | chr1.4:72260165-72260184 | None:intergenic | 45.0% | |
| TAACAAGCCTTCCACTGAAC+AGG | + | chr1.4:72256048-72256067 | MS.gene09988:CDS | 45.0% | |
| TAAGGGCCACCTAGCAATTA+TGG | + | chr1.4:72259995-72260014 | MS.gene09988:CDS | 45.0% | |
| TACTTCAAGTGGCCGGTATA+TGG | + | chr1.4:72259959-72259978 | MS.gene09988:CDS | 45.0% | |
| TATCTACTTCTAGCAGGAGC+TGG | - | chr1.4:72259071-72259090 | None:intergenic | 45.0% | |
| TATGGCGAACCCAAGTTATC+TGG | + | chr1.4:72259253-72259272 | MS.gene09988:intron | 45.0% | |
| TATGTAGGTAACCTGTGCTC+AGG | - | chr1.4:72259124-72259143 | None:intergenic | 45.0% | |
| TCACACATCCAAGGTTGGAT+TGG | - | chr1.4:72257791-72257810 | None:intergenic | 45.0% | |
| TCATCATGCCTTCTTTGGAC+GGG | + | chr1.4:72260154-72260173 | MS.gene09988:intron | 45.0% | |
| TGATGAATCTGAGCCTGATC+AGG | + | chr1.4:72260021-72260040 | MS.gene09988:CDS | 45.0% | |
| TGGTGAATTATCGTTGAGCC+GGG | + | chr1.4:72256761-72256780 | MS.gene09988:intron | 45.0% | |
| TGTTGGAATGTGAGTGCTTG+GGG | + | chr1.4:72259000-72259019 | MS.gene09988:intron | 45.0% | |
| TTGAGAACCAAGGGATCTAC+TGG | + | chr1.4:72257286-72257305 | MS.gene09988:intron | 45.0% | |
| ! | AGAGAAAGGGGCTCTTTTCA+AGG | - | chr1.4:72258880-72258899 | None:intergenic | 45.0% |
| ! | AGTGTTGAGGCTTCAGTTTC+TGG | + | chr1.4:72261703-72261722 | MS.gene09988:CDS | 45.0% |
| ! | ATGGCTATTGGTGGTCGTAA+GGG | + | chr1.4:72259978-72259997 | MS.gene09988:CDS | 45.0% |
| ! | CTTTTCCTTTTCCAGGAGCA+TGG | + | chr1.4:72261677-72261696 | MS.gene09988:intron | 45.0% |
| ! | GAGAAAGGGGCTCTTTTCAA+GGG | - | chr1.4:72258879-72258898 | None:intergenic | 45.0% |
| ! | GGTTTTGCAGCCAGATAACT+TGG | - | chr1.4:72259266-72259285 | None:intergenic | 45.0% |
| ! | TACGAAGACGTTCTAGGCAT+AGG | + | chr1.4:72262232-72262251 | MS.gene09988:CDS | 45.0% |
| ! | TATGGCTATTGGTGGTCGTA+AGG | + | chr1.4:72259977-72259996 | MS.gene09988:CDS | 45.0% |
| ! | TTCGCGGCTTGATGTTTTCT+TGG | + | chr1.4:72260960-72260979 | MS.gene09988:intron | 45.0% |
| !! | ACACGCCTGATTTTGATGTG+TGG | + | chr1.4:72261425-72261444 | MS.gene09988:intron | 45.0% |
| !! | GTGGAAGGCTTGTTATTTGG+AGG | - | chr1.4:72256043-72256062 | None:intergenic | 45.0% |
| !!! | CGACACTCATTTTGAAACGG+AGG | + | chr1.4:72258259-72258278 | MS.gene09988:intron | 45.0% |
| AAGCCGCGAACAATCTCACA+AGG | - | chr1.4:72260950-72260969 | None:intergenic | 50.0% | |
| ACACACACACACACACACAC+TGG | + | chr1.4:72258595-72258614 | MS.gene09988:intron | 50.0% | |
| AGCAAATATCGAGCTTGGCC+CGG | - | chr1.4:72256782-72256801 | None:intergenic | 50.0% | |
| AGTGGAACACTCGGCTCATA+TGG | + | chr1.4:72261512-72261531 | MS.gene09988:intron | 50.0% | |
| AGTGGCCGGTATATGGCTAT+TGG | + | chr1.4:72259966-72259985 | MS.gene09988:CDS | 50.0% | |
| ATCTGCTAAAGCTGCTGCTC+AGG | + | chr1.4:72256530-72256549 | MS.gene09988:CDS | 50.0% | |
| ATGCAACCTCGGATGAATGG+TGG | - | chr1.4:72261376-72261395 | None:intergenic | 50.0% | |
| ATGCTGGATCCCAGCAAGAT+CGG | + | chr1.4:72262403-72262422 | MS.gene09988:CDS | 50.0% | |
| CAGAAACATCCCTCAGAACC+TGG | - | chr1.4:72262135-72262154 | None:intergenic | 50.0% | |
| CAGCCGGTACAGTTACTATG+TGG | + | chr1.4:72261882-72261901 | MS.gene09988:CDS | 50.0% | |
| CGACCATACGAAGACGTTCT+AGG | + | chr1.4:72262226-72262245 | MS.gene09988:CDS | 50.0% | |
| CGCAACAAGCAAAGAACCAG+TGG | - | chr1.4:72258922-72258941 | None:intergenic | 50.0% | |
| CTGAACCATGCTCCTGGAAA+AGG | - | chr1.4:72261685-72261704 | None:intergenic | 50.0% | |
| CTGCACAAGAGATAGAGGTC+AGG | + | chr1.4:72262458-72262477 | MS.gene09988:CDS | 50.0% | |
| GAGTGCATGAGAGGACATCA+CGG | - | chr1.4:72258455-72258474 | None:intergenic | 50.0% | |
| GGATCCAGCATGATTGTCTC+AGG | - | chr1.4:72262394-72262413 | None:intergenic | 50.0% | |
| GTATCTGACCTCCAGTACAG+TGG | - | chr1.4:72259292-72259311 | None:intergenic | 50.0% | |
| GTGTCCACTAGTGGAACACT+CGG | + | chr1.4:72261503-72261522 | MS.gene09988:intron | 50.0% | |
| GTTCTCCTGCTCCTGGAATA+AGG | - | chr1.4:72262282-72262301 | None:intergenic | 50.0% | |
| GTTTCTTTAGGCCACTCAGC+CGG | + | chr1.4:72261866-72261885 | MS.gene09988:CDS | 50.0% | |
| TCAACACTGAACCATGCTCC+TGG | - | chr1.4:72261691-72261710 | None:intergenic | 50.0% | |
| TCCACCTGAGACAATCATGC+TGG | + | chr1.4:72262387-72262406 | MS.gene09988:CDS | 50.0% | |
| TCCAGCATGATTGTCTCAGG+TGG | - | chr1.4:72262391-72262410 | None:intergenic | 50.0% | |
| TGAAATGCCAGAGCTGAGAC+TGG | - | chr1.4:72261956-72261975 | None:intergenic | 50.0% | |
| TGACCTCCAGTACAGTGGTT+TGG | - | chr1.4:72259287-72259306 | None:intergenic | 50.0% | |
| TGGATTATGCCTAGCGAAGG+AGG | + | chr1.4:72257466-72257485 | MS.gene09988:CDS | 50.0% | |
| ! | AGGAGCATGGTTCAGTGTTG+AGG | + | chr1.4:72261690-72261709 | MS.gene09988:intron | 50.0% |
| ! | CAAAAAGGCTTGCTTGCGTG+TGG | + | chr1.4:72262094-72262113 | MS.gene09988:CDS | 50.0% |
| ! | GTTCAACTCTAAGGGCAACC+CGG | - | chr1.4:72261290-72261309 | None:intergenic | 50.0% |
| !! | AAAGGGGCTCTTTTCAAGGG+AGG | - | chr1.4:72258876-72258895 | None:intergenic | 50.0% |
| !! | AGCACTTGAACTGGTAGTGG+AGG | - | chr1.4:72259483-72259502 | None:intergenic | 50.0% |
| !! | CAGGTTCTGAGGGATGTTTC+TGG | + | chr1.4:72262133-72262152 | MS.gene09988:CDS | 50.0% |
| !! | CAGTGGATTATGCCTAGCGA+AGG | + | chr1.4:72257463-72257482 | MS.gene09988:intron | 50.0% |
| !! | GCACTTGAACTGGTAGTGGA+GGG | - | chr1.4:72259482-72259501 | None:intergenic | 50.0% |
| !! | TAGTAACTGTACCGGCTGAG+TGG | - | chr1.4:72261880-72261899 | None:intergenic | 50.0% |
| AAGTTGGGTTCTCCTGCTCC+TGG | - | chr1.4:72262289-72262308 | None:intergenic | 55.0% | |
| ACAAGGGGAGACGAACTGGT+TGG | - | chr1.4:72261911-72261930 | None:intergenic | 55.0% | |
| ACTAGAGCTCCCGCATATGC+AGG | - | chr1.4:72261264-72261283 | None:intergenic | 55.0% | |
| AGCTGCTGTGGAAGCTGTCA+AGG | + | chr1.4:72262486-72262505 | MS.gene09988:CDS | 55.0% | |
| CATATGCAGGGTTCGGGAAG+GGG | - | chr1.4:72261251-72261270 | None:intergenic | 55.0% | |
| CCACTTAATGGCTACTGCCG+GGG | + | chr1.4:72261985-72262004 | MS.gene09988:CDS | 55.0% | |
| CTAGAGCTCCCGCATATGCA+GGG | - | chr1.4:72261263-72261282 | None:intergenic | 55.0% | |
| CTTCCCGAACCCTGCATATG+CGG | + | chr1.4:72261251-72261270 | MS.gene09988:intron | 55.0% | |
| CTTGACAAGGGGAGACGAAC+TGG | - | chr1.4:72261915-72261934 | None:intergenic | 55.0% | |
| GCATATGCAGGGTTCGGGAA+GGG | - | chr1.4:72261252-72261271 | None:intergenic | 55.0% | |
| GCCACTTAATGGCTACTGCC+GGG | + | chr1.4:72261984-72262003 | MS.gene09988:CDS | 55.0% | |
| GCTGCTGTGGAAGCTGTCAA+GGG | + | chr1.4:72262487-72262506 | MS.gene09988:CDS | 55.0% | |
| GGCCACTTAATGGCTACTGC+CGG | + | chr1.4:72261983-72262002 | MS.gene09988:CDS | 55.0% | |
| GGCCGGTATATGGCTATTGG+TGG | + | chr1.4:72259969-72259988 | MS.gene09988:CDS | 55.0% | |
| GTACCTGAAGCTCCCTGATC+AGG | - | chr1.4:72260037-72260056 | None:intergenic | 55.0% | |
| TACTTCTAGCAGGAGCTGGG+AGG | - | chr1.4:72259067-72259086 | None:intergenic | 55.0% | |
| TCAACCACTCACCGAAGCAC+TGG | - | chr1.4:72258961-72258980 | None:intergenic | 55.0% | |
| TGAGCCGAGTGTTCCACTAG+TGG | - | chr1.4:72261510-72261529 | None:intergenic | 55.0% | |
| TTCCCGAACCCTGCATATGC+GGG | + | chr1.4:72261252-72261271 | MS.gene09988:intron | 55.0% | |
| ! | GGCTTGCTTGCGTGTGGTAA+TGG | + | chr1.4:72262100-72262119 | MS.gene09988:CDS | 55.0% |
| !! | GCTTGAGGAGTGTCCACTAG+TGG | + | chr1.4:72261494-72261513 | MS.gene09988:intron | 55.0% |
| AGCTGCTGCTCAGGCTGAGA+AGG | + | chr1.4:72256539-72256558 | MS.gene09988:CDS | 60.0% | |
| CCCCGGCAGTAGCCATTAAG+TGG | - | chr1.4:72261988-72262007 | None:intergenic | 60.0% | |
| CGCATATGCAGGGTTCGGGA+AGG | - | chr1.4:72261253-72261272 | None:intergenic | 60.0% | |
| CTCCCGCATATGCAGGGTTC+GGG | - | chr1.4:72261257-72261276 | None:intergenic | 60.0% | |
| GAAGGGGTCCCACCAATGGA+TGG | - | chr1.4:72261235-72261254 | None:intergenic | 60.0% | |
| GAGCCTGATCAGGGAGCTTC+AGG | + | chr1.4:72260031-72260050 | MS.gene09988:CDS | 60.0% | |
| GCTCCCGCATATGCAGGGTT+CGG | - | chr1.4:72261258-72261277 | None:intergenic | 60.0% | |
| GGAGGCCAATGTCTGAGCAC+TGG | - | chr1.4:72259049-72259068 | None:intergenic | 60.0% | |
| GGATCCCAGCAAGATCGGCA+CGG | + | chr1.4:72262408-72262427 | MS.gene09988:CDS | 60.0% | |
| GGTCAGGATGGAAGCTGCTG+TGG | + | chr1.4:72262474-72262493 | MS.gene09988:CDS | 60.0% | |
| TCAAGGGCCAGTCTCAGCTC+TGG | + | chr1.4:72261946-72261965 | MS.gene09988:CDS | 60.0% | |
| TCTGCCAGTGCTTCGGTGAG+TGG | + | chr1.4:72258954-72258973 | MS.gene09988:intron | 60.0% | |
| ! | ATGCGGGAGCTCTAGTGCAC+CGG | + | chr1.4:72261268-72261287 | MS.gene09988:intron | 60.0% |
| ! | CTCACCGTGCCGATCTTGCT+GGG | - | chr1.4:72262415-72262434 | None:intergenic | 60.0% |
| ! | TCTCACCGTGCCGATCTTGC+TGG | - | chr1.4:72262416-72262435 | None:intergenic | 60.0% |
| !! | GGGGCTCTTTTCAAGGGAGG+AGG | - | chr1.4:72258873-72258892 | None:intergenic | 60.0% |
| TCGGGAAGGGGTCCCACCAA+TGG | - | chr1.4:72261239-72261258 | None:intergenic | 65.0% | |
| ! | TGCGGGAGCTCTAGTGCACC+GGG | + | chr1.4:72261269-72261288 | MS.gene09988:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.4 | gene | 72256013 | 72262720 | 72256013 | ID=MS.gene09988 |
| chr1.4 | mRNA | 72256013 | 72262720 | 72256013 | ID=MS.gene09988.t1;Parent=MS.gene09988 |
| chr1.4 | exon | 72256013 | 72256069 | 72256013 | ID=MS.gene09988.t1.exon1;Parent=MS.gene09988.t1 |
| chr1.4 | CDS | 72256013 | 72256069 | 72256013 | ID=cds.MS.gene09988.t1;Parent=MS.gene09988.t1 |
| chr1.4 | exon | 72256301 | 72256366 | 72256301 | ID=MS.gene09988.t1.exon2;Parent=MS.gene09988.t1 |
| chr1.4 | CDS | 72256301 | 72256366 | 72256301 | ID=cds.MS.gene09988.t1;Parent=MS.gene09988.t1 |
| chr1.4 | exon | 72256471 | 72256560 | 72256471 | ID=MS.gene09988.t1.exon3;Parent=MS.gene09988.t1 |
| chr1.4 | CDS | 72256471 | 72256560 | 72256471 | ID=cds.MS.gene09988.t1;Parent=MS.gene09988.t1 |
| chr1.4 | exon | 72257466 | 72257598 | 72257466 | ID=MS.gene09988.t1.exon4;Parent=MS.gene09988.t1 |
| chr1.4 | CDS | 72257466 | 72257598 | 72257466 | ID=cds.MS.gene09988.t1;Parent=MS.gene09988.t1 |
| chr1.4 | exon | 72259934 | 72260052 | 72259934 | ID=MS.gene09988.t1.exon5;Parent=MS.gene09988.t1 |
| chr1.4 | CDS | 72259934 | 72260052 | 72259934 | ID=cds.MS.gene09988.t1;Parent=MS.gene09988.t1 |
| chr1.4 | exon | 72260440 | 72260507 | 72260440 | ID=MS.gene09988.t1.exon6;Parent=MS.gene09988.t1 |
| chr1.4 | CDS | 72260440 | 72260507 | 72260440 | ID=cds.MS.gene09988.t1;Parent=MS.gene09988.t1 |
| chr1.4 | exon | 72261079 | 72261127 | 72261079 | ID=MS.gene09988.t1.exon7;Parent=MS.gene09988.t1 |
| chr1.4 | CDS | 72261079 | 72261127 | 72261079 | ID=cds.MS.gene09988.t1;Parent=MS.gene09988.t1 |
| chr1.4 | exon | 72261692 | 72262720 | 72261692 | ID=MS.gene09988.t1.exon8;Parent=MS.gene09988.t1 |
| chr1.4 | CDS | 72261692 | 72262720 | 72261692 | ID=cds.MS.gene09988.t1;Parent=MS.gene09988.t1 |
| Gene Sequence |
| Protein sequence |
