Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene005249.t1 | XP_003591137.1 | 98.2 | 385 | 7 | 0 | 1 | 385 | 1 | 385 | 2.80E-217 | 764.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene005249.t1 | Q93VB2 | 77.8 | 351 | 76 | 1 | 35 | 385 | 77 | 425 | 6.1e-160 | 565.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene005249.t1 | G7I8N8 | 98.2 | 385 | 7 | 0 | 1 | 385 | 1 | 385 | 2.1e-217 | 764.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene005249 | MS.gene00645 | PPI |
| MS.gene047175 | MS.gene005249 | PPI |
| MS.gene002071 | MS.gene005249 | PPI |
| MS.gene072034 | MS.gene005249 | PPI |
| MS.gene005249 | MS.gene06798 | PPI |
| MS.gene005249 | MS.gene06556 | PPI |
| MS.gene005249 | MS.gene013452 | PPI |
| MS.gene049425 | MS.gene005249 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene005249.t1 | MTR_1g083230 | 98.182 | 385 | 7 | 0 | 1 | 385 | 1 | 385 | 0.0 | 788 |
| MS.gene005249.t1 | MTR_7g108520 | 73.926 | 349 | 80 | 4 | 41 | 382 | 71 | 415 | 0.0 | 520 |
| MS.gene005249.t1 | MTR_7g108520 | 73.926 | 349 | 80 | 4 | 41 | 382 | 71 | 415 | 0.0 | 520 |
| MS.gene005249.t1 | MTR_3g093590 | 59.305 | 403 | 134 | 7 | 4 | 380 | 16 | 414 | 2.46e-163 | 464 |
| MS.gene005249.t1 | MTR_1g088855 | 62.000 | 350 | 128 | 2 | 37 | 382 | 4 | 352 | 1.42e-153 | 437 |
| MS.gene005249.t1 | MTR_7g108520 | 79.098 | 244 | 50 | 1 | 41 | 284 | 71 | 313 | 8.14e-142 | 407 |
| MS.gene005249.t1 | MTR_4g130190 | 32.567 | 261 | 164 | 5 | 36 | 291 | 15 | 268 | 4.01e-39 | 140 |
| MS.gene005249.t1 | MTR_4g130190 | 32.707 | 266 | 167 | 5 | 36 | 296 | 15 | 273 | 8.34e-39 | 142 |
| MS.gene005249.t1 | MTR_4g130190 | 32.707 | 266 | 167 | 5 | 36 | 296 | 15 | 273 | 1.16e-38 | 141 |
| MS.gene005249.t1 | MTR_4g130190 | 31.507 | 219 | 141 | 4 | 83 | 296 | 1 | 215 | 2.02e-26 | 107 |
| MS.gene005249.t1 | MTR_4g130190 | 31.507 | 219 | 141 | 4 | 83 | 296 | 1 | 215 | 2.62e-26 | 107 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene005249.t1 | AT3G62770 | 75.335 | 373 | 87 | 2 | 13 | 385 | 58 | 425 | 0.0 | 571 |
| MS.gene005249.t1 | AT3G62770 | 75.802 | 343 | 78 | 2 | 13 | 355 | 58 | 395 | 0.0 | 525 |
| MS.gene005249.t1 | AT2G40810 | 59.259 | 378 | 137 | 5 | 17 | 380 | 14 | 388 | 1.35e-160 | 456 |
| MS.gene005249.t1 | AT2G40810 | 59.259 | 378 | 137 | 5 | 17 | 380 | 14 | 388 | 1.35e-160 | 456 |
| MS.gene005249.t1 | AT3G56440 | 60.490 | 367 | 131 | 6 | 26 | 382 | 26 | 388 | 2.94e-160 | 456 |
| MS.gene005249.t1 | AT3G56440 | 60.000 | 340 | 122 | 6 | 26 | 355 | 26 | 361 | 6.62e-145 | 416 |
| MS.gene005249.t1 | AT3G56440 | 59.197 | 299 | 109 | 5 | 26 | 314 | 26 | 321 | 3.69e-125 | 364 |
| MS.gene005249.t1 | AT5G05150 | 47.514 | 362 | 171 | 5 | 25 | 384 | 22 | 366 | 1.56e-110 | 328 |
| MS.gene005249.t1 | AT2G40810 | 56.805 | 169 | 58 | 3 | 226 | 380 | 96 | 263 | 2.29e-57 | 188 |
| MS.gene005249.t1 | AT2G40810 | 46.809 | 94 | 48 | 2 | 17 | 110 | 14 | 105 | 4.89e-20 | 89.4 |
| MS.gene005249.t1 | AT4G30510 | 31.727 | 249 | 162 | 4 | 39 | 282 | 14 | 259 | 9.78e-32 | 123 |
| MS.gene005249.t1 | AT4G30510 | 32.195 | 205 | 134 | 3 | 83 | 282 | 1 | 205 | 4.58e-25 | 104 |
Find 120 sgRNAs with CRISPR-Local
Find 285 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGGACGTTGGAGGTAGAATT+TGG | 0.206534 | 1.4:-67294955 | None:intergenic |
| GGTTGCAGAAGGGTCAAATT+AGG | 0.220681 | 1.4:+67295415 | MS.gene005249:CDS |
| GTCCCAAATCATCACCTTAT+TGG | 0.233471 | 1.4:-67295175 | None:intergenic |
| GCTCCAAAGGGACTCTTGTT+AGG | 0.259047 | 1.4:+67295541 | MS.gene005249:CDS |
| ATGTGAAGTTTCACATGTTT+CGG | 0.262218 | 1.4:+67295368 | MS.gene005249:CDS |
| AGAATGTCTCTTCTGGCTTT+AGG | 0.269846 | 1.4:-67298117 | None:intergenic |
| TTTGGTCCCGGCGGCGGAAT+TGG | 0.275340 | 1.4:+67295081 | MS.gene005249:CDS |
| GATTTGGGGAAGTTGGAATT+GGG | 0.276850 | 1.4:-67294927 | None:intergenic |
| CGATAGAATCGTCGTTGTTT+TGG | 0.280713 | 1.4:+67295266 | MS.gene005249:CDS |
| GGATTTGGGGAAGTTGGAAT+TGG | 0.282399 | 1.4:-67294928 | None:intergenic |
| TGTGAAGTTTCACATGTTTC+GGG | 0.284835 | 1.4:+67295369 | MS.gene005249:CDS |
| CTTCGGAATCGAGAGGCATT+AGG | 0.303534 | 1.4:-67294888 | None:intergenic |
| TTCACATGTTTCGGGAACTA+TGG | 0.320785 | 1.4:+67295377 | MS.gene005249:CDS |
| AAGGTTGATTCGGGATTGTT+GGG | 0.324856 | 1.4:+67296522 | MS.gene005249:CDS |
| CAGCCAATAAGGTGATGATT+TGG | 0.335450 | 1.4:+67295172 | MS.gene005249:CDS |
| GGACGTTGGAGGTAGAATTT+GGG | 0.340297 | 1.4:-67294954 | None:intergenic |
| TGTTTCGGGAACTATGGTTT+TGG | 0.343715 | 1.4:+67295383 | MS.gene005249:CDS |
| CCCACGCTATCCAGCCAATA+AGG | 0.343990 | 1.4:+67295161 | MS.gene005249:CDS |
| TCGTCTCTTTCATTTATTAG+AGG | 0.349163 | 1.4:+67296600 | MS.gene005249:CDS |
| GAAGGTTGATTCGGGATTGT+TGG | 0.356073 | 1.4:+67296521 | MS.gene005249:CDS |
| TTTGCCGCCGGCACCGATCA+TGG | 0.367511 | 1.4:+67295009 | MS.gene005249:CDS |
| TTCAACCTGAAGGTTGATTC+GGG | 0.377452 | 1.4:+67296513 | MS.gene005249:CDS |
| TCATACTAGAATGTCTCTTC+TGG | 0.391067 | 1.4:-67298124 | None:intergenic |
| CTTCAACCTGAAGGTTGATT+CGG | 0.394087 | 1.4:+67296512 | MS.gene005249:CDS |
| GTTGCAGAAGGGTCAAATTA+GGG | 0.396959 | 1.4:+67295416 | MS.gene005249:CDS |
| AACCCTAACAAGAGTCCCTT+TGG | 0.416142 | 1.4:-67295544 | None:intergenic |
| GGCTTGTCCTGGGTTGCAGA+AGG | 0.416417 | 1.4:+67295404 | MS.gene005249:CDS |
| GGAAGTTGGAATTGGGGTTG+AGG | 0.417719 | 1.4:-67294920 | None:intergenic |
| TTCGGAATCGAGAGGCATTA+GGG | 0.424964 | 1.4:-67294887 | None:intergenic |
| CTCCAAAGGGACTCTTGTTA+GGG | 0.426131 | 1.4:+67295542 | MS.gene005249:CDS |
| GGTTGAGGATGGTGATTCTT+CGG | 0.429172 | 1.4:-67294905 | None:intergenic |
| AGCCAATAAGGTGATGATTT+GGG | 0.436245 | 1.4:+67295173 | MS.gene005249:CDS |
| CGGAGAGTTGTCGTTTCGTT+CGG | 0.437248 | 1.4:+67295218 | MS.gene005249:CDS |
| AGCAAGCAAACGACCATCTT+GGG | 0.438730 | 1.4:-67295511 | None:intergenic |
| ACAATCCCGAATCAACCTTC+AGG | 0.441849 | 1.4:-67296518 | None:intergenic |
| TAAGAGAACTAAGTTCATAA+TGG | 0.444385 | 1.4:+67295455 | MS.gene005249:CDS |
| TTACAATATCATGTTGCCTT+CGG | 0.456525 | 1.4:+67296882 | MS.gene005249:CDS |
| ACCTTATTGGCTGGATAGCG+TGG | 0.456909 | 1.4:-67295162 | None:intergenic |
| TAGCAAGCAAACGACCATCT+TGG | 0.463630 | 1.4:-67295512 | None:intergenic |
| CTTGCTACTGCAAGCTCCAA+AGG | 0.465454 | 1.4:+67295528 | MS.gene005249:CDS |
| CGGCAAAGCAGCCGGAGTCC+TGG | 0.467181 | 1.4:-67294993 | None:intergenic |
| GTTGGAATTGGGGTTGAGGA+TGG | 0.469395 | 1.4:-67294916 | None:intergenic |
| CAAATCATCACCTTATTGGC+TGG | 0.472373 | 1.4:-67295171 | None:intergenic |
| GAAACTATTGCTAACCCTAC+GGG | 0.472592 | 1.4:+67295342 | MS.gene005249:CDS |
| GACTAAGCCAATTCCGCCGC+CGG | 0.485684 | 1.4:-67295088 | None:intergenic |
| TACAATTGTAATACTTGGCA+TGG | 0.487686 | 1.4:+67296917 | MS.gene005249:CDS |
| CGGAGTCCTGGTTGAAGGAT+AGG | 0.489221 | 1.4:-67294981 | None:intergenic |
| TGCAATATCCTCGCTTTCGT+CGG | 0.492313 | 1.4:+67295126 | MS.gene005249:CDS |
| GGATGGTTCTTTGCTTCAAG+AGG | 0.496036 | 1.4:+67295578 | MS.gene005249:CDS |
| TCGTTTCGTTCGGAGGTGAA+AGG | 0.497763 | 1.4:+67295228 | MS.gene005249:CDS |
| ATTTGACCCTTCTGCAACCC+AGG | 0.497963 | 1.4:-67295411 | None:intergenic |
| GAAGCCGCCGACGGGCTAGT+AGG | 0.498221 | 1.4:-67296579 | None:intergenic |
| TAATACTTGGCATGGATGGC+AGG | 0.502259 | 1.4:+67296925 | MS.gene005249:CDS |
| GGTGCCGGCGGCAAAGCAGC+CGG | 0.502398 | 1.4:-67295001 | None:intergenic |
| ATTTGGGGAAGTTGGAATTG+GGG | 0.506962 | 1.4:-67294926 | None:intergenic |
| GGATAGGTGGAGGACGTTGG+AGG | 0.513566 | 1.4:-67294965 | None:intergenic |
| GATCATCAATCACGGTGTAT+CGG | 0.516564 | 1.4:+67295198 | MS.gene005249:CDS |
| GCAGCCGGAGTCCTGGTTGA+AGG | 0.517004 | 1.4:-67294986 | None:intergenic |
| GGCGGAAAATTTCGCGGAAG+GGG | 0.519716 | 1.4:-67295053 | None:intergenic |
| GCGGAAGCCATGATCGGTGC+CGG | 0.522383 | 1.4:-67295016 | None:intergenic |
| GCTTGTCCTGGGTTGCAGAA+GGG | 0.523856 | 1.4:+67295405 | MS.gene005249:CDS |
| GAAGGATAGGTGGAGGACGT+TGG | 0.528553 | 1.4:-67294968 | None:intergenic |
| TGTCAATTTGACACTGCAAC+TGG | 0.532622 | 1.4:+67298061 | MS.gene005249:CDS |
| ATTGTAATACTTGGCATGGA+TGG | 0.536767 | 1.4:+67296921 | MS.gene005249:CDS |
| ATCCTCGCTTTCGTCGGTGG+CGG | 0.540583 | 1.4:+67295132 | MS.gene005249:CDS |
| CACTCTGAGCTAAAATACTT+AGG | 0.547800 | 1.4:-67296828 | None:intergenic |
| AGAGTTGTCGTTTCGTTCGG+AGG | 0.554459 | 1.4:+67295221 | MS.gene005249:CDS |
| GACTCCGGCTGCTTTGCCGC+CGG | 0.557421 | 1.4:+67294997 | MS.gene005249:CDS |
| GTAGGACTAGACTTGGATGT+AGG | 0.560668 | 1.4:-67296561 | None:intergenic |
| CGGGCTAGTAGGACTAGACT+TGG | 0.561677 | 1.4:-67296568 | None:intergenic |
| TGAAACTATTGCTAACCCTA+CGG | 0.562131 | 1.4:+67295341 | MS.gene005249:CDS |
| GCTCAATTTCGCTTGCAAGA+AGG | 0.566558 | 1.4:+67296858 | MS.gene005249:CDS |
| TTGCTACTGCAAGCTCCAAA+GGG | 0.566940 | 1.4:+67295529 | MS.gene005249:CDS |
| AATATCCTCGCTTTCGTCGG+TGG | 0.568451 | 1.4:+67295129 | MS.gene005249:CDS |
| CCACTGTGCAGTGGAAGAGA+AGG | 0.569859 | 1.4:-67296454 | None:intergenic |
| AAAGAGACGAAGCCGCCGAC+GGG | 0.573302 | 1.4:-67296587 | None:intergenic |
| CGGCGGAAAATTTCGCGGAA+GGG | 0.574148 | 1.4:-67295054 | None:intergenic |
| GAAGGCGAGGCTATATATCT+CGG | 0.578334 | 1.4:-67296436 | None:intergenic |
| ACTAAGCCAATTCCGCCGCC+GGG | 0.583325 | 1.4:-67295087 | None:intergenic |
| GCGGCGGAAAATTTCGCGGA+AGG | 0.583883 | 1.4:-67295055 | None:intergenic |
| CGTTCATGTCTTCAACCTGA+AGG | 0.584539 | 1.4:+67296503 | MS.gene005249:CDS |
| CGCCGCCGGGACCAAAATCG+CGG | 0.587933 | 1.4:-67295074 | None:intergenic |
| GAGAGGCATTAGGGTTTGAG+AGG | 0.590032 | 1.4:-67294878 | None:intergenic |
| GAAAGAGACGAAGCCGCCGA+CGG | 0.591104 | 1.4:-67296588 | None:intergenic |
| GACGTTGGAGGTAGAATTTG+GGG | 0.592299 | 1.4:-67294953 | None:intergenic |
| AATCGCGGCGGAAAATTTCG+CGG | 0.597246 | 1.4:-67295059 | None:intergenic |
| GAAACTTCACATAGCCCCGT+AGG | 0.599056 | 1.4:-67295357 | None:intergenic |
| ATTTGACACTGCAACTGGTG+GGG | 0.602166 | 1.4:+67298066 | MS.gene005249:CDS |
| AGGTTGATTCGGGATTGTTG+GGG | 0.605401 | 1.4:+67296523 | MS.gene005249:CDS |
| CCTGGTTGAAGGATAGGTGG+AGG | 0.605827 | 1.4:-67294975 | None:intergenic |
| GACAGCTAACCACTGTGCAG+TGG | 0.609111 | 1.4:-67296463 | None:intergenic |
| ATCCGCCACCGACGAAAGCG+AGG | 0.611040 | 1.4:-67295134 | None:intergenic |
| GTTAGCTGTCTCGAGTGACA+AGG | 0.613865 | 1.4:+67296476 | MS.gene005249:CDS |
| GAAGCCATGATCGGTGCCGG+CGG | 0.615093 | 1.4:-67295013 | None:intergenic |
| TATTGCAGCGGAAGAGCATG+TGG | 0.617070 | 1.4:-67295110 | None:intergenic |
| CAATTTGACACTGCAACTGG+TGG | 0.617442 | 1.4:+67298064 | MS.gene005249:CDS |
| TTGAAGCAAAGAACCATCCA+AGG | 0.620125 | 1.4:-67295574 | None:intergenic |
| CGAGGCTATATATCTCGGCT+CGG | 0.620501 | 1.4:-67296431 | None:intergenic |
| AAACTTCACATAGCCCCGTA+GGG | 0.620552 | 1.4:-67295356 | None:intergenic |
| CCTTATTGGCTGGATAGCGT+GGG | 0.620931 | 1.4:-67295161 | None:intergenic |
| AGTCCTGGTTGAAGGATAGG+TGG | 0.628383 | 1.4:-67294978 | None:intergenic |
| GTAGATGCGGAAGCCATGAT+CGG | 0.630967 | 1.4:-67295022 | None:intergenic |
| CTATCCTTCAACCAGGACTC+CGG | 0.636696 | 1.4:+67294982 | MS.gene005249:CDS |
| AGGGGTCACAGTTGTAGATG+CGG | 0.647313 | 1.4:-67295035 | None:intergenic |
| TTGCAAGCGAAATTGAGCCA+CGG | 0.647957 | 1.4:-67296853 | None:intergenic |
| CCTCCACCTATCCTTCAACC+AGG | 0.650019 | 1.4:+67294975 | MS.gene005249:CDS |
| CTTCAGGTTGAAGACATGAA+CGG | 0.653538 | 1.4:-67296502 | None:intergenic |
| CGCCGGGACCAAAATCGCGG+CGG | 0.659958 | 1.4:-67295071 | None:intergenic |
| AATTTGACACTGCAACTGGT+GGG | 0.661297 | 1.4:+67298065 | MS.gene005249:CDS |
| GTGCAGTGGAAGAGAAGGCG+AGG | 0.663052 | 1.4:-67296449 | None:intergenic |
| TTTGGGACGATCATCAATCA+CGG | 0.678175 | 1.4:+67295190 | MS.gene005249:CDS |
| TTAGCTGTCTCGAGTGACAA+GGG | 0.678765 | 1.4:+67296477 | MS.gene005249:CDS |
| GTCTAGTCCTACTAGCCCGT+CGG | 0.680314 | 1.4:+67296572 | MS.gene005249:CDS |
| TAGTCCTACTAGCCCGTCGG+CGG | 0.686994 | 1.4:+67296575 | MS.gene005249:CDS |
| GGTGATTCTTCGGAATCGAG+AGG | 0.689322 | 1.4:-67294895 | None:intergenic |
| CCTTCTCTTCCACTGCACAG+TGG | 0.689510 | 1.4:+67296454 | MS.gene005249:CDS |
| CGAAAGCGAGGATATTGCAG+CGG | 0.695987 | 1.4:-67295122 | None:intergenic |
| AAACTATTGCTAACCCTACG+GGG | 0.703947 | 1.4:+67295343 | MS.gene005249:CDS |
| TGATGATATCAGGTACGGAG+AGG | 0.704005 | 1.4:+67296402 | MS.gene005249:intron |
| ACGTTGGAGGTAGAATTTGG+GGG | 0.709414 | 1.4:-67294952 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | CATGTATTATTTTATTTTTT+TGG | - | chr1.4:67297748-67297767 | None:intergenic | 10.0% |
| !! | AAAAATACAATTGTAATACT+TGG | + | chr1.4:67296912-67296931 | MS.gene005249:CDS | 15.0% |
| !! | AAAACAAATATATAAAACTG+CGG | + | chr1.4:67297904-67297923 | MS.gene005249:intron | 15.0% |
| !! | TAAATTTATAAAAGAATACC+AGG | + | chr1.4:67297355-67297374 | MS.gene005249:intron | 15.0% |
| !! | TATTTAAGTATTAAGTATGA+TGG | - | chr1.4:67295960-67295979 | None:intergenic | 15.0% |
| !!! | AAATTTATTTTTTCTTGATC+AGG | - | chr1.4:67297410-67297429 | None:intergenic | 15.0% |
| !!! | AATTTATTTTTTCTTGATCA+GGG | - | chr1.4:67297409-67297428 | None:intergenic | 15.0% |
| !! | AAAATCTTAAAAAAGACCAT+AGG | + | chr1.4:67297857-67297876 | MS.gene005249:intron | 20.0% |
| !! | AATTAATGAATAACTAACAG+TGG | - | chr1.4:67296639-67296658 | None:intergenic | 20.0% |
| !! | ATTGCTAGAATTAGAAATAT+AGG | + | chr1.4:67295745-67295764 | MS.gene005249:intron | 20.0% |
| !! | CTTAATACTTAAATAACCTT+AGG | + | chr1.4:67295965-67295984 | MS.gene005249:intron | 20.0% |
| !! | GATATTAGAATTATTCACAT+AGG | + | chr1.4:67297020-67297039 | MS.gene005249:intron | 20.0% |
| !! | TGAATGATGATAAATTGATA+TGG | - | chr1.4:67297955-67297974 | None:intergenic | 20.0% |
| !!! | AAAACAACGGTTTTAAAAAA+AGG | + | chr1.4:67296133-67296152 | MS.gene005249:intron | 20.0% |
| !!! | CTTTTTTCTTTTAGAGTTTA+AGG | + | chr1.4:67297231-67297250 | MS.gene005249:intron | 20.0% |
| !!! | TTTAAAACCGTTGTTTTTAA+GGG | - | chr1.4:67296130-67296149 | None:intergenic | 20.0% |
| !!! | TTTTAAAACCGTTGTTTTTA+AGG | - | chr1.4:67296131-67296150 | None:intergenic | 20.0% |
| ! | AAAAAATCAGTGTACAAAGT+AGG | + | chr1.4:67295899-67295918 | MS.gene005249:intron | 25.0% |
| ! | ACATAAAACTGAACTAAAAG+TGG | + | chr1.4:67296018-67296037 | MS.gene005249:intron | 25.0% |
| ! | AGAATTAGAAATATAGGTTG+AGG | + | chr1.4:67295751-67295770 | MS.gene005249:intron | 25.0% |
| ! | ATAAATACACATATGAGCAA+TGG | - | chr1.4:67297312-67297331 | None:intergenic | 25.0% |
| ! | ATTTATGCCCTTAAAAACAA+CGG | + | chr1.4:67296120-67296139 | MS.gene005249:intron | 25.0% |
| ! | CATAAAACTGAACTAAAAGT+GGG | + | chr1.4:67296019-67296038 | MS.gene005249:intron | 25.0% |
| ! | CATTAATTAGTTATCATGTG+TGG | + | chr1.4:67296651-67296670 | MS.gene005249:intron | 25.0% |
| ! | TAAATGAATTAAGGGCAATT+GGG | - | chr1.4:67297497-67297516 | None:intergenic | 25.0% |
| ! | TAAGAGAACTAAGTTCATAA+TGG | + | chr1.4:67295455-67295474 | MS.gene005249:CDS | 25.0% |
| ! | TTAAATGAATTAAGGGCAAT+TGG | - | chr1.4:67297498-67297517 | None:intergenic | 25.0% |
| !! | ATAACATTTTTACCCTTGAA+AGG | + | chr1.4:67296085-67296104 | MS.gene005249:intron | 25.0% |
| !! | TAACATTTTTACCCTTGAAA+GGG | + | chr1.4:67296086-67296105 | MS.gene005249:intron | 25.0% |
| !! | TATGATGAGTTCAATTGTTT+TGG | + | chr1.4:67296364-67296383 | MS.gene005249:intron | 25.0% |
| !! | TTGGAAATTATGGTTTTTGA+TGG | + | chr1.4:67296752-67296771 | MS.gene005249:intron | 25.0% |
| !!! | GGTTTTAAAAAAAGGATTTG+AGG | + | chr1.4:67296141-67296160 | MS.gene005249:intron | 25.0% |
| !!! | TCTAAAACATCCTAAGTTTT+GGG | + | chr1.4:67297823-67297842 | MS.gene005249:intron | 25.0% |
| !!! | TGTTTGTTAGTTTTGTTACT+AGG | + | chr1.4:67295713-67295732 | MS.gene005249:intron | 25.0% |
| !!! | TTAGTTTTGTTACTAGGATT+TGG | + | chr1.4:67295719-67295738 | MS.gene005249:intron | 25.0% |
| !!! | TTCTAAAACATCCTAAGTTT+TGG | + | chr1.4:67297822-67297841 | MS.gene005249:intron | 25.0% |
| !!! | TTGTTTAGAAATGTTGGTTT+TGG | + | chr1.4:67295795-67295814 | MS.gene005249:intron | 25.0% |
| !!! | TTTGTTTGGTTTGGAAATTA+TGG | + | chr1.4:67296742-67296761 | MS.gene005249:intron | 25.0% |
| !!! | TTTTTTAGTCTTTGCAATAG+TGG | - | chr1.4:67295885-67295904 | None:intergenic | 25.0% |
| AGGAAACAACGAACTAAAAA+AGG | - | chr1.4:67296977-67296996 | None:intergenic | 30.0% | |
| ATGTGAAGTTTCACATGTTT+CGG | + | chr1.4:67295368-67295387 | MS.gene005249:CDS | 30.0% | |
| CATGCTTATAGTTGTTGTAA+AGG | + | chr1.4:67297540-67297559 | MS.gene005249:intron | 30.0% | |
| TAATATCTCTAAGCAACACA+AGG | - | chr1.4:67297007-67297026 | None:intergenic | 30.0% | |
| TACAATTGTAATACTTGGCA+TGG | + | chr1.4:67296917-67296936 | MS.gene005249:CDS | 30.0% | |
| TCGTCTCTTTCATTTATTAG+AGG | + | chr1.4:67296600-67296619 | MS.gene005249:CDS | 30.0% | |
| TGCAACAACAAATGTTGTTA+TGG | - | chr1.4:67296710-67296729 | None:intergenic | 30.0% | |
| TTACAATATCATGTTGCCTT+CGG | + | chr1.4:67296882-67296901 | MS.gene005249:CDS | 30.0% | |
| TTATAGTAACCAAGTTGCTT+GGG | + | chr1.4:67297582-67297601 | MS.gene005249:intron | 30.0% | |
| TTATTGTTGTCCCAAAACTT+AGG | - | chr1.4:67297836-67297855 | None:intergenic | 30.0% | |
| ! | TGCTGATTGTTTAGAAATGT+TGG | + | chr1.4:67295789-67295808 | MS.gene005249:intron | 30.0% |
| !!! | AATTGTTTTGGAAGACTGAA+TGG | + | chr1.4:67296376-67296395 | MS.gene005249:intron | 30.0% |
| !!! | ATTGTTTTGGAAGACTGAAT+GGG | + | chr1.4:67296377-67296396 | MS.gene005249:intron | 30.0% |
| !!! | CATCAGATGTTTTAATTCTC+GGG | - | chr1.4:67298004-67298023 | None:intergenic | 30.0% |
| !!! | GCATCAGATGTTTTAATTCT+CGG | - | chr1.4:67298005-67298024 | None:intergenic | 30.0% |
| AAAAAGACCATAGGTTTGAG+AGG | + | chr1.4:67297866-67297885 | MS.gene005249:intron | 35.0% | |
| AAAAGACCATAGGTTTGAGA+GGG | + | chr1.4:67297867-67297886 | MS.gene005249:intron | 35.0% | |
| AAGCAACACAAGGAAAAAGA+AGG | - | chr1.4:67296997-67297016 | None:intergenic | 35.0% | |
| ACAACGAACTAAAAAAGGCA+TGG | - | chr1.4:67296972-67296991 | None:intergenic | 35.0% | |
| AGCCAATAAGGTGATGATTT+GGG | + | chr1.4:67295173-67295192 | MS.gene005249:CDS | 35.0% | |
| ATTGTAATACTTGGCATGGA+TGG | + | chr1.4:67296921-67296940 | MS.gene005249:CDS | 35.0% | |
| CACTCTGAGCTAAAATACTT+AGG | - | chr1.4:67296831-67296850 | None:intergenic | 35.0% | |
| CATCATACACACAAAACAGA+AGG | - | chr1.4:67296351-67296370 | None:intergenic | 35.0% | |
| CCTACAAAACAGACAGAATT+AGG | - | chr1.4:67296801-67296820 | None:intergenic | 35.0% | |
| CTTATAGTAACCAAGTTGCT+TGG | + | chr1.4:67297581-67297600 | MS.gene005249:intron | 35.0% | |
| GCTATTGACAGCATATATGT+TGG | + | chr1.4:67296311-67296330 | MS.gene005249:intron | 35.0% | |
| TAATCATGCAGCTAGTTGTT+TGG | - | chr1.4:67297282-67297301 | None:intergenic | 35.0% | |
| TGAAACTATTGCTAACCCTA+CGG | + | chr1.4:67295341-67295360 | MS.gene005249:CDS | 35.0% | |
| TGGGAAGAAGAACAAAACAA+GGG | + | chr1.4:67296038-67296057 | MS.gene005249:intron | 35.0% | |
| TGTGAAGTTTCACATGTTTC+GGG | + | chr1.4:67295369-67295388 | MS.gene005249:CDS | 35.0% | |
| TGTTAAGATAAGACTACCAG+TGG | - | chr1.4:67297160-67297179 | None:intergenic | 35.0% | |
| TTTCTTGATCAGGGATTAGA+GGG | - | chr1.4:67297443-67297462 | None:intergenic | 35.0% | |
| ! | CAGCCTATGTCAATTTTAGA+GGG | - | chr1.4:67297116-67297135 | None:intergenic | 35.0% |
| ! | CCTAATTCTGTCTGTTTTGT+AGG | + | chr1.4:67296798-67296817 | MS.gene005249:intron | 35.0% |
| ! | TATACCGCCATAGCATTTTA+GGG | - | chr1.4:67295853-67295872 | None:intergenic | 35.0% |
| ! | TCAGCCTATGTCAATTTTAG+AGG | - | chr1.4:67297117-67297136 | None:intergenic | 35.0% |
| ! | TGAAAGTGATGTTCTAAACC+TGG | - | chr1.4:67297376-67297395 | None:intergenic | 35.0% |
| ! | TGTATTTTTCTGATGACCGA+AGG | - | chr1.4:67296901-67296920 | None:intergenic | 35.0% |
| ! | TGTTAGGGTTTTCAATACCT+TGG | + | chr1.4:67295557-67295576 | MS.gene005249:CDS | 35.0% |
| ! | TTTTCTTGATCAGGGATAGA+GGG | - | chr1.4:67297401-67297420 | None:intergenic | 35.0% |
| ! | TTTTCTTGATCAGGGATTAG+AGG | - | chr1.4:67297444-67297463 | None:intergenic | 35.0% |
| ! | TTTTTCTTGATCAGGGATAG+AGG | - | chr1.4:67297402-67297421 | None:intergenic | 35.0% |
| !! | CTACCCTCTAAAATTGACAT+AGG | + | chr1.4:67297110-67297129 | MS.gene005249:intron | 35.0% |
| !! | TGTTTTGCTATAACCCAAGA+TGG | + | chr1.4:67295498-67295517 | MS.gene005249:CDS | 35.0% |
| !!! | CTAAGTATTTTAGCTCAGAG+TGG | + | chr1.4:67296829-67296848 | MS.gene005249:CDS | 35.0% |
| !!! | TATTTTTTTGGCTTTCGCAC+CGG | - | chr1.4:67297736-67297755 | None:intergenic | 35.0% |
| AAAATGCTATGGCGGTATAG+TGG | + | chr1.4:67295854-67295873 | MS.gene005249:intron | 40.0% | |
| AAACTATTGCTAACCCTACG+GGG | + | chr1.4:67295343-67295362 | MS.gene005249:CDS | 40.0% | |
| AAATGCTATGGCGGTATAGT+GGG | + | chr1.4:67295855-67295874 | MS.gene005249:intron | 40.0% | |
| AAGCTGGAGACAAACAATAG+CGG | - | chr1.4:67296235-67296254 | None:intergenic | 40.0% | |
| AATTCTCGGGAAAAAAGAGC+AGG | - | chr1.4:67297991-67298010 | None:intergenic | 40.0% | |
| AATTTGACACTGCAACTGGT+GGG | + | chr1.4:67298065-67298084 | MS.gene005249:CDS | 40.0% | |
| ACAAACAATAGCGGTTGTTG+CGG | - | chr1.4:67296226-67296245 | None:intergenic | 40.0% | |
| ACCCTTGAAAGGGTTTGAAT+TGG | + | chr1.4:67296096-67296115 | MS.gene005249:intron | 40.0% | |
| ATCATCAAGATTTGTGCCAC+TGG | + | chr1.4:67297141-67297160 | MS.gene005249:intron | 40.0% | |
| ATTTGGGGAAGTTGGAATTG+GGG | - | chr1.4:67294929-67294948 | None:intergenic | 40.0% | |
| CAAATCATCACCTTATTGGC+TGG | - | chr1.4:67295174-67295193 | None:intergenic | 40.0% | |
| CAGCCAATAAGGTGATGATT+TGG | + | chr1.4:67295172-67295191 | MS.gene005249:CDS | 40.0% | |
| GAAACTATTGCTAACCCTAC+GGG | + | chr1.4:67295342-67295361 | MS.gene005249:CDS | 40.0% | |
| GATCATCAATCACGGTGTAT+CGG | + | chr1.4:67295198-67295217 | MS.gene005249:CDS | 40.0% | |
| GATGGCAGGTATTTCAGTAA+TGG | + | chr1.4:67296939-67296958 | MS.gene005249:intron | 40.0% | |
| GATTTGGGGAAGTTGGAATT+GGG | - | chr1.4:67294930-67294949 | None:intergenic | 40.0% | |
| GCCAATTCAAACCCTTTCAA+GGG | - | chr1.4:67296100-67296119 | None:intergenic | 40.0% | |
| GTCCCAAATCATCACCTTAT+TGG | - | chr1.4:67295178-67295197 | None:intergenic | 40.0% | |
| GTGGGAAGAAGAACAAAACA+AGG | + | chr1.4:67296037-67296056 | MS.gene005249:intron | 40.0% | |
| GTTGCAGAAGGGTCAAATTA+GGG | + | chr1.4:67295416-67295435 | MS.gene005249:CDS | 40.0% | |
| GTTGTATTGCTCTGTACCTA+AGG | - | chr1.4:67295984-67296003 | None:intergenic | 40.0% | |
| TCAGTCAGAAACCCTAATAG+TGG | + | chr1.4:67296168-67296187 | MS.gene005249:intron | 40.0% | |
| TCCAAACCAAACAAAACCCT+GGG | - | chr1.4:67296737-67296756 | None:intergenic | 40.0% | |
| TGAATGGGAGTGATGATATC+AGG | + | chr1.4:67296392-67296411 | MS.gene005249:intron | 40.0% | |
| TGCCAATTCAAACCCTTTCA+AGG | - | chr1.4:67296101-67296120 | None:intergenic | 40.0% | |
| TGTCAATTTGACACTGCAAC+TGG | + | chr1.4:67298061-67298080 | MS.gene005249:CDS | 40.0% | |
| TTCACATAGGACTACTAGCA+TGG | + | chr1.4:67297033-67297052 | MS.gene005249:intron | 40.0% | |
| TTCACATGTTTCGGGAACTA+TGG | + | chr1.4:67295377-67295396 | MS.gene005249:CDS | 40.0% | |
| TTCCAAACCAAACAAAACCC+TGG | - | chr1.4:67296738-67296757 | None:intergenic | 40.0% | |
| TTGAAGCAAAGAACCATCCA+AGG | - | chr1.4:67295577-67295596 | None:intergenic | 40.0% | |
| ! | AGGGTTTTCAATACCTTGGA+TGG | + | chr1.4:67295561-67295580 | MS.gene005249:CDS | 40.0% |
| ! | ATACCGCCATAGCATTTTAG+GGG | - | chr1.4:67295852-67295871 | None:intergenic | 40.0% |
| ! | CGATAGAATCGTCGTTGTTT+TGG | + | chr1.4:67295266-67295285 | MS.gene005249:CDS | 40.0% |
| ! | CTATACCGCCATAGCATTTT+AGG | - | chr1.4:67295854-67295873 | None:intergenic | 40.0% |
| ! | CTTCAACCTGAAGGTTGATT+CGG | + | chr1.4:67296512-67296531 | MS.gene005249:CDS | 40.0% |
| ! | TAGAATTTGGGGGTGGATTT+GGG | - | chr1.4:67294945-67294964 | None:intergenic | 40.0% |
| ! | TGTTTCGGGAACTATGGTTT+TGG | + | chr1.4:67295383-67295402 | MS.gene005249:CDS | 40.0% |
| ! | TTCAACCTGAAGGTTGATTC+GGG | + | chr1.4:67296513-67296532 | MS.gene005249:CDS | 40.0% |
| ! | TTTGGGACGATCATCAATCA+CGG | + | chr1.4:67295190-67295209 | MS.gene005249:CDS | 40.0% |
| !! | AAGGTTGATTCGGGATTGTT+GGG | + | chr1.4:67296522-67296541 | MS.gene005249:CDS | 40.0% |
| !! | AATTTTAGAGGGTAGTGCAC+GGG | - | chr1.4:67297105-67297124 | None:intergenic | 40.0% |
| !! | AGAATGTCTCTTCTGGCTTT+AGG | - | chr1.4:67298120-67298139 | None:intergenic | 40.0% |
| !! | CAATTTTAGAGGGTAGTGCA+CGG | - | chr1.4:67297106-67297125 | None:intergenic | 40.0% |
| !! | CTTCAGGTTGAAGACATGAA+CGG | - | chr1.4:67296505-67296524 | None:intergenic | 40.0% |
| AAACTTCACATAGCCCCGTA+GGG | - | chr1.4:67295359-67295378 | None:intergenic | 45.0% | |
| AACCCTAACAAGAGTCCCTT+TGG | - | chr1.4:67295547-67295566 | None:intergenic | 45.0% | |
| AATACCGGGTTCAATTCCCA+GGG | + | chr1.4:67297636-67297655 | MS.gene005249:intron | 45.0% | |
| ACAATCCCGAATCAACCTTC+AGG | - | chr1.4:67296521-67296540 | None:intergenic | 45.0% | |
| ACATAGGACTACTAGCATGG+TGG | + | chr1.4:67297036-67297055 | MS.gene005249:intron | 45.0% | |
| ACGTTGGAGGTAGAATTTGG+GGG | - | chr1.4:67294955-67294974 | None:intergenic | 45.0% | |
| AGCAAGCAAACGACCATCTT+GGG | - | chr1.4:67295514-67295533 | None:intergenic | 45.0% | |
| AGGACGTTGGAGGTAGAATT+TGG | - | chr1.4:67294958-67294977 | None:intergenic | 45.0% | |
| ATTGTTTGTCTCCAGCTTGC+AGG | + | chr1.4:67296237-67296256 | MS.gene005249:intron | 45.0% | |
| ATTTGACACTGCAACTGGTG+GGG | + | chr1.4:67298066-67298085 | MS.gene005249:CDS | 45.0% | |
| ATTTGTCGCCCAACACTGTT+GGG | + | chr1.4:67297703-67297722 | MS.gene005249:intron | 45.0% | |
| CAATTTGACACTGCAACTGG+TGG | + | chr1.4:67298064-67298083 | MS.gene005249:CDS | 45.0% | |
| CCTAATAGTGGTTGCGATAG+CGG | + | chr1.4:67296180-67296199 | MS.gene005249:intron | 45.0% | |
| CGCTATCGCAACCACTATTA+GGG | - | chr1.4:67296182-67296201 | None:intergenic | 45.0% | |
| CGTTCATGTCTTCAACCTGA+AGG | + | chr1.4:67296503-67296522 | MS.gene005249:CDS | 45.0% | |
| CTCCAAAGGGACTCTTGTTA+GGG | + | chr1.4:67295542-67295561 | MS.gene005249:CDS | 45.0% | |
| CTGTCAATAGCACGCTATAG+CGG | - | chr1.4:67296302-67296321 | None:intergenic | 45.0% | |
| GAAGGCGAGGCTATATATCT+CGG | - | chr1.4:67296439-67296458 | None:intergenic | 45.0% | |
| GACGTTGGAGGTAGAATTTG+GGG | - | chr1.4:67294956-67294975 | None:intergenic | 45.0% | |
| GCTCAATTTCGCTTGCAAGA+AGG | + | chr1.4:67296858-67296877 | MS.gene005249:CDS | 45.0% | |
| GGACGTTGGAGGTAGAATTT+GGG | - | chr1.4:67294957-67294976 | None:intergenic | 45.0% | |
| GGATGGTTCTTTGCTTCAAG+AGG | + | chr1.4:67295578-67295597 | MS.gene005249:CDS | 45.0% | |
| GGATTTGGGGAAGTTGGAAT+TGG | - | chr1.4:67294931-67294950 | None:intergenic | 45.0% | |
| GGGAGTGATGATATCAGGTA+CGG | + | chr1.4:67296397-67296416 | MS.gene005249:intron | 45.0% | |
| GGTTGAGGATGGTGATTCTT+CGG | - | chr1.4:67294908-67294927 | None:intergenic | 45.0% | |
| GGTTGCAGAAGGGTCAAATT+AGG | + | chr1.4:67295415-67295434 | MS.gene005249:CDS | 45.0% | |
| GTAGGACTAGACTTGGATGT+AGG | - | chr1.4:67296564-67296583 | None:intergenic | 45.0% | |
| GTTTCCAACCCAACAGTGTT+GGG | - | chr1.4:67297714-67297733 | None:intergenic | 45.0% | |
| TAATACTTGGCATGGATGGC+AGG | + | chr1.4:67296925-67296944 | MS.gene005249:CDS | 45.0% | |
| TAGCAAGCAAACGACCATCT+TGG | - | chr1.4:67295515-67295534 | None:intergenic | 45.0% | |
| TGATGATATCAGGTACGGAG+AGG | + | chr1.4:67296402-67296421 | MS.gene005249:intron | 45.0% | |
| TGCAATATCCTCGCTTTCGT+CGG | + | chr1.4:67295126-67295145 | MS.gene005249:CDS | 45.0% | |
| TTAGCTGTCTCGAGTGACAA+GGG | + | chr1.4:67296477-67296496 | MS.gene005249:CDS | 45.0% | |
| TTGCAAGCGAAATTGAGCCA+CGG | - | chr1.4:67296856-67296875 | None:intergenic | 45.0% | |
| TTGCTACTGCAAGCTCCAAA+GGG | + | chr1.4:67295529-67295548 | MS.gene005249:CDS | 45.0% | |
| ! | AGAATTTGGGGGTGGATTTG+GGG | - | chr1.4:67294944-67294963 | None:intergenic | 45.0% |
| ! | GAAATTTTCCGCCGCGATTT+TGG | + | chr1.4:67295063-67295082 | MS.gene005249:CDS | 45.0% |
| ! | GTAGAATTTGGGGGTGGATT+TGG | - | chr1.4:67294946-67294965 | None:intergenic | 45.0% |
| ! | TACCGCCATAGCATTTTAGG+GGG | - | chr1.4:67295851-67295870 | None:intergenic | 45.0% |
| !! | AACACTGTTGGGTTGGAAAC+CGG | + | chr1.4:67297714-67297733 | MS.gene005249:intron | 45.0% |
| !! | AGGTTGATTCGGGATTGTTG+GGG | + | chr1.4:67296523-67296542 | MS.gene005249:CDS | 45.0% |
| !! | ATTTGTTGTTGCATCAGCCC+AGG | + | chr1.4:67296717-67296736 | MS.gene005249:intron | 45.0% |
| !! | GAAGGTTGATTCGGGATTGT+TGG | + | chr1.4:67296521-67296540 | MS.gene005249:CDS | 45.0% |
| !! | TTCGGAATCGAGAGGCATTA+GGG | - | chr1.4:67294890-67294909 | None:intergenic | 45.0% |
| !! | TTTGTTGTTGCATCAGCCCA+GGG | + | chr1.4:67296718-67296737 | MS.gene005249:intron | 45.0% |
| !!! | ACTATGGTTTTGGCTTGTCC+TGG | + | chr1.4:67295393-67295412 | MS.gene005249:CDS | 45.0% |
| !!! | CTATGGTTTTGGCTTGTCCT+GGG | + | chr1.4:67295394-67295413 | MS.gene005249:CDS | 45.0% |
| !!! | ATTTTTATTAAATGAATTAA+GGG | - | chr1.4:67297505-67297524 | None:intergenic | 5.0% |
| !!! | TATTTTTATTAAATGAATTA+AGG | - | chr1.4:67297506-67297525 | None:intergenic | 5.0% |
| AATATCCTCGCTTTCGTCGG+TGG | + | chr1.4:67295129-67295148 | MS.gene005249:CDS | 50.0% | |
| AATCGCGGCGGAAAATTTCG+CGG | - | chr1.4:67295062-67295081 | None:intergenic | 50.0% | |
| ACCTGCCCCCTAAAATGCTA+TGG | + | chr1.4:67295843-67295862 | MS.gene005249:intron | 50.0% | |
| AGACCATAGGTTTGAGAGGG+AGG | + | chr1.4:67297870-67297889 | MS.gene005249:intron | 50.0% | |
| AGGACGTACACAGGGAATAC+CGG | + | chr1.4:67297621-67297640 | MS.gene005249:intron | 50.0% | |
| AGGGGTCACAGTTGTAGATG+CGG | - | chr1.4:67295038-67295057 | None:intergenic | 50.0% | |
| AGTCCTGGTTGAAGGATAGG+TGG | - | chr1.4:67294981-67295000 | None:intergenic | 50.0% | |
| ATACCGGGTTCAATTCCCAG+GGG | + | chr1.4:67297637-67297656 | MS.gene005249:intron | 50.0% | |
| ATCCCTCCCTCTCAAACCTA+TGG | - | chr1.4:67297876-67297895 | None:intergenic | 50.0% | |
| ATTTGACCCTTCTGCAACCC+AGG | - | chr1.4:67295414-67295433 | None:intergenic | 50.0% | |
| CCGCTATCGCAACCACTATT+AGG | - | chr1.4:67296183-67296202 | None:intergenic | 50.0% | |
| CGAAAGCGAGGATATTGCAG+CGG | - | chr1.4:67295125-67295144 | None:intergenic | 50.0% | |
| CGAGGCTATATATCTCGGCT+CGG | - | chr1.4:67296434-67296453 | None:intergenic | 50.0% | |
| CTATCCTTCAACCAGGACTC+CGG | + | chr1.4:67294982-67295001 | MS.gene005249:CDS | 50.0% | |
| CTTGCTACTGCAAGCTCCAA+AGG | + | chr1.4:67295528-67295547 | MS.gene005249:CDS | 50.0% | |
| GAAACTTCACATAGCCCCGT+AGG | - | chr1.4:67295360-67295379 | None:intergenic | 50.0% | |
| GAATACCGGGTTCAATTCCC+AGG | + | chr1.4:67297635-67297654 | MS.gene005249:intron | 50.0% | |
| GACCATAGGTTTGAGAGGGA+GGG | + | chr1.4:67297871-67297890 | MS.gene005249:intron | 50.0% | |
| GATTTGTCGCCCAACACTGT+TGG | + | chr1.4:67297702-67297721 | MS.gene005249:intron | 50.0% | |
| GCTCCAAAGGGACTCTTGTT+AGG | + | chr1.4:67295541-67295560 | MS.gene005249:CDS | 50.0% | |
| GGAAGTTGGAATTGGGGTTG+AGG | - | chr1.4:67294923-67294942 | None:intergenic | 50.0% | |
| GGTGATTCTTCGGAATCGAG+AGG | - | chr1.4:67294898-67294917 | None:intergenic | 50.0% | |
| GGTTTCCAACCCAACAGTGT+TGG | - | chr1.4:67297715-67297734 | None:intergenic | 50.0% | |
| GTAGATGCGGAAGCCATGAT+CGG | - | chr1.4:67295025-67295044 | None:intergenic | 50.0% | |
| GTATTCCCTGTGTACGTCCT+TGG | - | chr1.4:67297621-67297640 | None:intergenic | 50.0% | |
| GTTAGCTGTCTCGAGTGACA+AGG | + | chr1.4:67296476-67296495 | MS.gene005249:CDS | 50.0% | |
| GTTGGAATTGGGGTTGAGGA+TGG | - | chr1.4:67294919-67294938 | None:intergenic | 50.0% | |
| GTTGTTGCGGCTGCTAATTG+CGG | - | chr1.4:67296213-67296232 | None:intergenic | 50.0% | |
| TCGTTTCGTTCGGAGGTGAA+AGG | + | chr1.4:67295228-67295247 | MS.gene005249:CDS | 50.0% | |
| TGCCCCCTAAAATGCTATGG+CGG | + | chr1.4:67295846-67295865 | MS.gene005249:intron | 50.0% | |
| TTGGAGGTAGAATTTGGGGG+TGG | - | chr1.4:67294952-67294971 | None:intergenic | 50.0% | |
| TTGTTGCGGCTGCTAATTGC+GGG | - | chr1.4:67296212-67296231 | None:intergenic | 50.0% | |
| ! | ACAGTGTTGGGCGACAAATC+CGG | - | chr1.4:67297702-67297721 | None:intergenic | 50.0% |
| ! | ACCTTATTGGCTGGATAGCG+TGG | - | chr1.4:67295165-67295184 | None:intergenic | 50.0% |
| ! | AGAGTTGTCGTTTCGTTCGG+AGG | + | chr1.4:67295221-67295240 | MS.gene005249:CDS | 50.0% |
| ! | AGTGGTTGCGATAGCGGTTT+GGG | + | chr1.4:67296186-67296205 | MS.gene005249:intron | 50.0% |
| ! | CCTTATTGGCTGGATAGCGT+GGG | - | chr1.4:67295164-67295183 | None:intergenic | 50.0% |
| ! | CGGAGAGTTGTCGTTTCGTT+CGG | + | chr1.4:67295218-67295237 | MS.gene005249:CDS | 50.0% |
| ! | GCTATAGCGGAATAGCGTAG+CGG | - | chr1.4:67296289-67296308 | None:intergenic | 50.0% |
| ! | TAGTGGTTGCGATAGCGGTT+TGG | + | chr1.4:67296185-67296204 | MS.gene005249:intron | 50.0% |
| ! | TATTGCAGCGGAAGAGCATG+TGG | - | chr1.4:67295113-67295132 | None:intergenic | 50.0% |
| !! | CTTCGGAATCGAGAGGCATT+AGG | - | chr1.4:67294891-67294910 | None:intergenic | 50.0% |
| !! | GAGAGGCATTAGGGTTTGAG+AGG | - | chr1.4:67294881-67294900 | None:intergenic | 50.0% |
| !!! | CATCAGCCCAGGGTTTTGTT+TGG | + | chr1.4:67296728-67296747 | MS.gene005249:intron | 50.0% |
| !!! | GCCCAGGGTTTTGTTTGGTT+TGG | + | chr1.4:67296733-67296752 | MS.gene005249:intron | 50.0% |
| !!! | TTTTAGCTCAGAGTGGTCCG+TGG | + | chr1.4:67296836-67296855 | MS.gene005249:CDS | 50.0% |
| CAAATCCGGCTCATGCGTAG+AGG | - | chr1.4:67297688-67297707 | None:intergenic | 55.0% | |
| CCACTAGAGCCCAAGCAACT+TGG | - | chr1.4:67297594-67297613 | None:intergenic | 55.0% | |
| CCACTGTGCAGTGGAAGAGA+AGG | - | chr1.4:67296457-67296476 | None:intergenic | 55.0% | |
| CCCACGCTATCCAGCCAATA+AGG | + | chr1.4:67295161-67295180 | MS.gene005249:CDS | 55.0% | |
| CCTCCACCTATCCTTCAACC+AGG | + | chr1.4:67294975-67294994 | MS.gene005249:CDS | 55.0% | |
| CCTGGTTGAAGGATAGGTGG+AGG | - | chr1.4:67294978-67294997 | None:intergenic | 55.0% | |
| CCTTCTCTTCCACTGCACAG+TGG | + | chr1.4:67296454-67296473 | MS.gene005249:CDS | 55.0% | |
| CGGAGTCCTGGTTGAAGGAT+AGG | - | chr1.4:67294984-67295003 | None:intergenic | 55.0% | |
| CGGCGGAAAATTTCGCGGAA+GGG | - | chr1.4:67295057-67295076 | None:intergenic | 55.0% | |
| GAAGGATAGGTGGAGGACGT+TGG | - | chr1.4:67294971-67294990 | None:intergenic | 55.0% | |
| GACAGCTAACCACTGTGCAG+TGG | - | chr1.4:67296466-67296485 | None:intergenic | 55.0% | |
| GCCTTCCAAGGACGTACACA+GGG | + | chr1.4:67297613-67297632 | MS.gene005249:intron | 55.0% | |
| GCTTGTCCTGGGTTGCAGAA+GGG | + | chr1.4:67295405-67295424 | MS.gene005249:CDS | 55.0% | |
| GGACGTACACAGGGAATACC+GGG | + | chr1.4:67297622-67297641 | MS.gene005249:intron | 55.0% | |
| GGCGGAAAATTTCGCGGAAG+GGG | - | chr1.4:67295056-67295075 | None:intergenic | 55.0% | |
| GTCTAGTCCTACTAGCCCGT+CGG | + | chr1.4:67296572-67296591 | MS.gene005249:CDS | 55.0% | |
| TACCGGGTTCAATTCCCAGG+GGG | + | chr1.4:67297638-67297657 | MS.gene005249:intron | 55.0% | |
| TCCCTGTGTACGTCCTTGGA+AGG | - | chr1.4:67297617-67297636 | None:intergenic | 55.0% | |
| TTCCCCCTGGGAATTGAACC+CGG | - | chr1.4:67297643-67297662 | None:intergenic | 55.0% | |
| ! | AACGCTTTTGGCCTGCAAGC+TGG | - | chr1.4:67296251-67296270 | None:intergenic | 55.0% |
| ! | CCAAGTTGCTTGGGCTCTAG+TGG | + | chr1.4:67297591-67297610 | MS.gene005249:intron | 55.0% |
| !! | CGGGCTAGTAGGACTAGACT+TGG | - | chr1.4:67296571-67296590 | None:intergenic | 55.0% |
| !! | GCCATAGCATTTTAGGGGGC+AGG | - | chr1.4:67295847-67295866 | None:intergenic | 55.0% |
| AAAGAGACGAAGCCGCCGAC+GGG | - | chr1.4:67296590-67296609 | None:intergenic | 60.0% | |
| ACTAAGCCAATTCCGCCGCC+GGG | - | chr1.4:67295090-67295109 | None:intergenic | 60.0% | |
| ATCCTCGCTTTCGTCGGTGG+CGG | + | chr1.4:67295132-67295151 | MS.gene005249:CDS | 60.0% | |
| CGGAATAGCGTAGCGGTGCT+GGG | - | chr1.4:67296282-67296301 | None:intergenic | 60.0% | |
| GAAAGAGACGAAGCCGCCGA+CGG | - | chr1.4:67296591-67296610 | None:intergenic | 60.0% | |
| GACTAAGCCAATTCCGCCGC+CGG | - | chr1.4:67295091-67295110 | None:intergenic | 60.0% | |
| GCATGCCTCTACGCATGAGC+CGG | + | chr1.4:67297680-67297699 | MS.gene005249:intron | 60.0% | |
| GCGGCGGAAAATTTCGCGGA+AGG | - | chr1.4:67295058-67295077 | None:intergenic | 60.0% | |
| GGATAGGTGGAGGACGTTGG+AGG | - | chr1.4:67294968-67294987 | None:intergenic | 60.0% | |
| GGCCTTCCAAGGACGTACAC+AGG | + | chr1.4:67297612-67297631 | MS.gene005249:intron | 60.0% | |
| GGCTTGTCCTGGGTTGCAGA+AGG | + | chr1.4:67295404-67295423 | MS.gene005249:CDS | 60.0% | |
| GGGCAGGTGCGACACTATCT+AGG | - | chr1.4:67295831-67295850 | None:intergenic | 60.0% | |
| GTCGCCCAACACTGTTGGGT+TGG | + | chr1.4:67297707-67297726 | MS.gene005249:intron | 60.0% | |
| GTGCAGTGGAAGAGAAGGCG+AGG | - | chr1.4:67296452-67296471 | None:intergenic | 60.0% | |
| TAGTCCTACTAGCCCGTCGG+CGG | + | chr1.4:67296575-67296594 | MS.gene005249:CDS | 60.0% | |
| TTCCCAGGGGGAACAACGCT+TGG | + | chr1.4:67297650-67297669 | MS.gene005249:intron | 60.0% | |
| ! | AGCCAAGCGTTGTTCCCCCT+GGG | - | chr1.4:67297655-67297674 | None:intergenic | 60.0% |
| ! | GGGGGTGGATTTGGGGAAGT+TGG | - | chr1.4:67294937-67294956 | None:intergenic | 60.0% |
| ! | TAGCCAAGCGTTGTTCCCCC+TGG | - | chr1.4:67297656-67297675 | None:intergenic | 60.0% |
| ! | TAGCGTAGCGGTGCTGGGTT+CGG | - | chr1.4:67296277-67296296 | None:intergenic | 60.0% |
| ! | TGGGCTCTAGTGGCCTTCCA+AGG | + | chr1.4:67297601-67297620 | MS.gene005249:intron | 60.0% |
| ! | TGGGTTCGGCGCAACGCTTT+TGG | - | chr1.4:67296263-67296282 | None:intergenic | 60.0% |
| !! | TTCCGCCGCGATTTTGGTCC+CGG | + | chr1.4:67295069-67295088 | MS.gene005249:CDS | 60.0% |
| ATCCGCCACCGACGAAAGCG+AGG | - | chr1.4:67295137-67295156 | None:intergenic | 65.0% | |
| GCAGCCGGAGTCCTGGTTGA+AGG | - | chr1.4:67294989-67295008 | None:intergenic | 65.0% | |
| GCGGAAGCCATGATCGGTGC+CGG | - | chr1.4:67295019-67295038 | None:intergenic | 65.0% | |
| GCGGAATAGCGTAGCGGTGC+TGG | - | chr1.4:67296283-67296302 | None:intergenic | 65.0% | |
| TTTGGTCCCGGCGGCGGAAT+TGG | + | chr1.4:67295081-67295100 | MS.gene005249:CDS | 65.0% | |
| !! | GAAGCCATGATCGGTGCCGG+CGG | - | chr1.4:67295016-67295035 | None:intergenic | 65.0% |
| !! | TTTGCCGCCGGCACCGATCA+TGG | + | chr1.4:67295009-67295028 | MS.gene005249:CDS | 65.0% |
| CGCCGCCGGGACCAAAATCG+CGG | - | chr1.4:67295077-67295096 | None:intergenic | 70.0% | |
| CGCCGGGACCAAAATCGCGG+CGG | - | chr1.4:67295074-67295093 | None:intergenic | 70.0% | |
| CGGCAAAGCAGCCGGAGTCC+TGG | - | chr1.4:67294996-67295015 | None:intergenic | 70.0% | |
| ! | GACTCCGGCTGCTTTGCCGC+CGG | + | chr1.4:67294997-67295016 | MS.gene005249:CDS | 70.0% |
| !! | CGCCGCGATTTTGGTCCCGG+CGG | + | chr1.4:67295072-67295091 | MS.gene005249:CDS | 70.0% |
| !! | CGCGATTTTGGTCCCGGCGG+CGG | + | chr1.4:67295075-67295094 | MS.gene005249:CDS | 70.0% |
| !! | GAAGCCGCCGACGGGCTAGT+AGG | - | chr1.4:67296582-67296601 | None:intergenic | 70.0% |
| !! | GGTGCCGGCGGCAAAGCAGC+CGG | - | chr1.4:67295004-67295023 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.4 | gene | 67294868 | 67298141 | 67294868 | ID=MS.gene005249 |
| chr1.4 | mRNA | 67294868 | 67298141 | 67294868 | ID=MS.gene005249.t1;Parent=MS.gene005249 |
| chr1.4 | exon | 67294868 | 67295599 | 67294868 | ID=MS.gene005249.t1.exon1;Parent=MS.gene005249.t1 |
| chr1.4 | CDS | 67294868 | 67295599 | 67294868 | ID=cds.MS.gene005249.t1;Parent=MS.gene005249.t1 |
| chr1.4 | exon | 67296414 | 67296621 | 67296414 | ID=MS.gene005249.t1.exon2;Parent=MS.gene005249.t1 |
| chr1.4 | CDS | 67296414 | 67296621 | 67296414 | ID=cds.MS.gene005249.t1;Parent=MS.gene005249.t1 |
| chr1.4 | exon | 67296820 | 67296946 | 67296820 | ID=MS.gene005249.t1.exon3;Parent=MS.gene005249.t1 |
| chr1.4 | CDS | 67296820 | 67296946 | 67296820 | ID=cds.MS.gene005249.t1;Parent=MS.gene005249.t1 |
| chr1.4 | exon | 67298051 | 67298141 | 67298051 | ID=MS.gene005249.t1.exon4;Parent=MS.gene005249.t1 |
| chr1.4 | CDS | 67298051 | 67298141 | 67298051 | ID=cds.MS.gene005249.t1;Parent=MS.gene005249.t1 |
| Gene Sequence |
| Protein sequence |
