Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06556.t1 | XP_013461473.1 | 97.6 | 415 | 10 | 0 | 1 | 415 | 1 | 415 | 1.30E-236 | 828.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06556.t1 | Q0WPK3 | 73.7 | 392 | 92 | 2 | 23 | 414 | 6 | 386 | 7.3e-167 | 588.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06556.t1 | A0A072V2C7 | 97.6 | 415 | 10 | 0 | 1 | 415 | 1 | 415 | 9.6e-237 | 828.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049217 | MS.gene06556 | -0.833677 | 4.65E-56 | -1.69E-46 |
| MS.gene049265 | MS.gene06556 | 0.812991 | 3.21E-51 | -1.69E-46 |
| MS.gene049425 | MS.gene06556 | 0.944863 | 8.90E-104 | -1.69E-46 |
| MS.gene05079 | MS.gene06556 | 0.807853 | 4.13E-50 | -1.69E-46 |
| MS.gene051858 | MS.gene06556 | -0.817267 | 3.60E-52 | -1.69E-46 |
| MS.gene052379 | MS.gene06556 | -0.815673 | 8.19E-52 | -1.69E-46 |
| MS.gene053384 | MS.gene06556 | -0.802722 | 4.90E-49 | -1.69E-46 |
| MS.gene055636 | MS.gene06556 | -0.815865 | 7.43E-52 | -1.69E-46 |
| MS.gene055638 | MS.gene06556 | -0.804896 | 1.73E-49 | -1.69E-46 |
| MS.gene05592 | MS.gene06556 | -0.82389 | 1.09E-53 | -1.69E-46 |
| MS.gene057926 | MS.gene06556 | -0.817355 | 3.44E-52 | -1.69E-46 |
| MS.gene059902 | MS.gene06556 | -0.814297 | 1.66E-51 | -1.69E-46 |
| MS.gene060818 | MS.gene06556 | -0.839613 | 1.43E-57 | -1.69E-46 |
| MS.gene061200 | MS.gene06556 | -0.800842 | 1.19E-48 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene049425 | MS.gene06556 | PPI |
| MS.gene06556 | MS.gene06798 | PPI |
| MS.gene056055 | MS.gene06556 | PPI |
| MS.gene005249 | MS.gene06556 | PPI |
| MS.gene44120 | MS.gene06556 | PPI |
| MS.gene06556 | MS.gene013452 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06556.t1 | MTR_3g093590 | 97.590 | 415 | 10 | 0 | 1 | 415 | 1 | 415 | 0.0 | 848 |
| MS.gene06556.t1 | MTR_1g083230 | 58.313 | 403 | 138 | 7 | 16 | 414 | 4 | 380 | 7.79e-159 | 453 |
| MS.gene06556.t1 | MTR_7g108520 | 61.064 | 357 | 121 | 5 | 60 | 413 | 71 | 412 | 1.52e-150 | 433 |
| MS.gene06556.t1 | MTR_7g108520 | 61.064 | 357 | 121 | 5 | 60 | 413 | 71 | 412 | 1.52e-150 | 433 |
| MS.gene06556.t1 | MTR_1g088855 | 50.975 | 359 | 162 | 2 | 57 | 414 | 5 | 350 | 2.90e-127 | 371 |
| MS.gene06556.t1 | MTR_7g108520 | 66.805 | 241 | 80 | 0 | 60 | 300 | 71 | 311 | 1.30e-119 | 352 |
| MS.gene06556.t1 | MTR_4g130190 | 34.538 | 249 | 156 | 4 | 55 | 298 | 15 | 261 | 7.92e-44 | 154 |
| MS.gene06556.t1 | MTR_4g130190 | 34.538 | 249 | 156 | 4 | 55 | 298 | 15 | 261 | 1.37e-42 | 152 |
| MS.gene06556.t1 | MTR_4g130190 | 34.538 | 249 | 156 | 4 | 55 | 298 | 15 | 261 | 1.55e-42 | 153 |
| MS.gene06556.t1 | MTR_4g130190 | 33.005 | 203 | 131 | 3 | 101 | 298 | 1 | 203 | 7.47e-30 | 117 |
| MS.gene06556.t1 | MTR_4g130190 | 33.005 | 203 | 131 | 3 | 101 | 298 | 1 | 203 | 1.08e-29 | 117 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06556.t1 | AT3G56440 | 74.227 | 388 | 89 | 2 | 27 | 414 | 10 | 386 | 0.0 | 596 |
| MS.gene06556.t1 | AT2G40810 | 71.429 | 406 | 97 | 3 | 10 | 414 | 1 | 388 | 0.0 | 594 |
| MS.gene06556.t1 | AT2G40810 | 71.429 | 406 | 97 | 3 | 10 | 414 | 1 | 388 | 0.0 | 594 |
| MS.gene06556.t1 | AT3G56440 | 74.656 | 363 | 81 | 2 | 27 | 389 | 10 | 361 | 0.0 | 560 |
| MS.gene06556.t1 | AT3G56440 | 75.232 | 323 | 69 | 2 | 27 | 349 | 10 | 321 | 8.01e-177 | 496 |
| MS.gene06556.t1 | AT3G62770 | 57.323 | 396 | 145 | 5 | 23 | 414 | 45 | 420 | 1.90e-152 | 438 |
| MS.gene06556.t1 | AT3G62770 | 56.604 | 371 | 137 | 5 | 23 | 389 | 45 | 395 | 8.11e-140 | 405 |
| MS.gene06556.t1 | AT5G05150 | 47.666 | 407 | 164 | 5 | 10 | 413 | 1 | 361 | 6.64e-125 | 366 |
| MS.gene06556.t1 | AT2G40810 | 72.941 | 170 | 43 | 1 | 245 | 414 | 97 | 263 | 6.81e-82 | 253 |
| MS.gene06556.t1 | AT2G40810 | 53.333 | 120 | 40 | 2 | 10 | 128 | 1 | 105 | 1.01e-31 | 122 |
| MS.gene06556.t1 | AT4G30510 | 32.509 | 283 | 181 | 6 | 53 | 330 | 9 | 286 | 2.53e-38 | 142 |
| MS.gene06556.t1 | AT4G30510 | 32.766 | 235 | 150 | 5 | 101 | 330 | 1 | 232 | 2.06e-30 | 119 |
Find 106 sgRNAs with CRISPR-Local
Find 215 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAATTTCCGATCATTGAATT+TGG | 0.146013 | 3.2:-78546190 | None:intergenic |
| CATTCTGAACTAAAATATTT+TGG | 0.153937 | 3.2:-78548353 | None:intergenic |
| ATCCCAAATCAAAACTTTAT+TGG | 0.177425 | 3.2:-78546488 | None:intergenic |
| TTGGGGTTGGCACCGGTATT+TGG | 0.187638 | 3.2:-78547650 | None:intergenic |
| AACCTTTCAAAGAGACTTTC+AGG | 0.219715 | 3.2:+78546368 | MS.gene06556:CDS |
| TGCAGCTTTGATCAAGTAAA+TGG | 0.230085 | 3.2:+78549379 | MS.gene06556:CDS |
| CTGATTTGTTCTCAGTTTCA+TGG | 0.238417 | 3.2:+78546284 | MS.gene06556:CDS |
| ACTAAATTCATTGTGGCATT+TGG | 0.273806 | 3.2:+78548407 | MS.gene06556:CDS |
| AACTTGAGAGTGAGGGTGTT+TGG | 0.279915 | 3.2:+78547539 | MS.gene06556:CDS |
| TCTTCATCAAATTGATACTA+TGG | 0.283426 | 3.2:+78546642 | MS.gene06556:CDS |
| TCAGAGTGAAGCATGCAATT+TGG | 0.287147 | 3.2:-78546801 | None:intergenic |
| TCCCAAATCAAAACTTTATT+GGG | 0.292270 | 3.2:-78546487 | None:intergenic |
| CATGAAAGATAATGATGAAT+TGG | 0.295519 | 3.2:-78547669 | None:intergenic |
| GATATATGTTTATAACTTCA+TGG | 0.302452 | 3.2:+78546609 | MS.gene06556:CDS |
| ACTTGAGAGTGAGGGTGTTT+GGG | 0.303097 | 3.2:+78547540 | MS.gene06556:CDS |
| CAGAGTGAAGCATGCAATTT+GGG | 0.308247 | 3.2:-78546800 | None:intergenic |
| GTTCTCAGTTTCATGGAATC+AGG | 0.310536 | 3.2:+78546291 | MS.gene06556:CDS |
| CCATTCAAATACATTTGTTA+TGG | 0.324119 | 3.2:+78546696 | MS.gene06556:CDS |
| AACTTTATTGGGTGGATAGT+TGG | 0.360324 | 3.2:-78546476 | None:intergenic |
| ATGAAAGATAATGATGAATT+GGG | 0.360564 | 3.2:-78547668 | None:intergenic |
| GAAGATGAGGCCCCACTATT+GGG | 0.364649 | 3.2:-78546220 | None:intergenic |
| AGAAGATGAGGCCCCACTAT+TGG | 0.366717 | 3.2:-78546221 | None:intergenic |
| GGGCCTCATCTTCTCTTTCC+CGG | 0.370929 | 3.2:+78546230 | MS.gene06556:CDS |
| AGCATGCAATTTGGGAATCA+TGG | 0.405618 | 3.2:-78546792 | None:intergenic |
| GGTTAGAAGAGGGGTGGATA+GGG | 0.417025 | 3.2:+78547436 | MS.gene06556:intron |
| CACTTGATGCTGCCAACCAC+TGG | 0.429688 | 3.2:-78547493 | None:intergenic |
| TTGATACTATGGCAAATCCT+AGG | 0.431047 | 3.2:+78546653 | MS.gene06556:CDS |
| GCAGCTTTGATCAAGTAAAT+GGG | 0.450799 | 3.2:+78549380 | MS.gene06556:CDS |
| CTGTCATTGATGTCTGCATC+TGG | 0.455833 | 3.2:-78546253 | None:intergenic |
| AGGTTAGAAGAGGGGTGGAT+AGG | 0.457915 | 3.2:+78547435 | MS.gene06556:intron |
| AATTGTGAATACCCCAATAG+TGG | 0.458125 | 3.2:+78546208 | MS.gene06556:CDS |
| AGAATCTTCAATACAATGGA+TGG | 0.459968 | 3.2:+78546874 | MS.gene06556:CDS |
| ACCGGTATTTGGAGAAATCA+AGG | 0.473373 | 3.2:-78547639 | None:intergenic |
| AGCAACATCCTAGCGCTTGT+TGG | 0.476042 | 3.2:+78546439 | MS.gene06556:CDS |
| CAGGCCCTTGGACAGCAGTT+GGG | 0.479532 | 3.2:-78547580 | None:intergenic |
| CATTGATGTCTGCATCTGGC+CGG | 0.479957 | 3.2:-78546249 | None:intergenic |
| TTCCATCCATGCCAGAGATT+AGG | 0.483661 | 3.2:-78548445 | None:intergenic |
| GCTGCCAACCACTGGACATT+GGG | 0.488358 | 3.2:-78547485 | None:intergenic |
| GAAGTTCGAGTTGAACACTT+TGG | 0.488765 | 3.2:+78546742 | MS.gene06556:CDS |
| ACATTTGTTATGGCTTGTCC+AGG | 0.490027 | 3.2:+78546706 | MS.gene06556:CDS |
| TGATACTATGGCAAATCCTA+GGG | 0.491747 | 3.2:+78546654 | MS.gene06556:CDS |
| CCCTTGATTTCTCCAAATAC+CGG | 0.496555 | 3.2:+78547638 | MS.gene06556:CDS |
| GTCTCCCAATGTCCAGTGGT+TGG | 0.498399 | 3.2:+78547481 | MS.gene06556:CDS |
| ACATTTAGATCTGAAGTTCG+TGG | 0.499114 | 3.2:+78546541 | MS.gene06556:CDS |
| GTCCTAATCTCTGGCATGGA+TGG | 0.500489 | 3.2:+78548443 | MS.gene06556:CDS |
| CCATAACAAATGTATTTGAA+TGG | 0.510743 | 3.2:-78546696 | None:intergenic |
| TTAGCTGCTGGAACAAGTCA+TGG | 0.511790 | 3.2:+78546325 | MS.gene06556:CDS |
| GAATTCTGATGAAGTAGTAC+AGG | 0.516241 | 3.2:-78547599 | None:intergenic |
| CGCCTGAAAGTCTCTTTGAA+AGG | 0.516860 | 3.2:-78546370 | None:intergenic |
| CAGAACACTGTCCTAATCTC+TGG | 0.520013 | 3.2:+78548434 | MS.gene06556:CDS |
| TGCTTCACTCTGACAACGGA+CGG | 0.522941 | 3.2:+78546811 | MS.gene06556:CDS |
| CTATCGTGTAGGTTAGAAGA+GGG | 0.524773 | 3.2:+78547426 | MS.gene06556:intron |
| GCATGCAATTTGGGAATCAT+GGG | 0.526357 | 3.2:-78546791 | None:intergenic |
| ACAGGCCCTTGGACAGCAGT+TGG | 0.528221 | 3.2:-78547581 | None:intergenic |
| TCGTCTGTTTCAACATCTCA+AGG | 0.528457 | 3.2:+78546160 | MS.gene06556:CDS |
| ATATTTCCAAATTCAATGAT+CGG | 0.530341 | 3.2:+78546184 | MS.gene06556:CDS |
| CTTGCAACTGCTAGTGAGAA+GGG | 0.530985 | 3.2:+78546841 | MS.gene06556:CDS |
| TGATGAATTGGGGTTGGCAC+CGG | 0.533284 | 3.2:-78547657 | None:intergenic |
| GACTACGGTTGCTTAGCTGC+TGG | 0.535019 | 3.2:+78546313 | MS.gene06556:CDS |
| CAAATCAAAACTTTATTGGG+TGG | 0.537171 | 3.2:-78546484 | None:intergenic |
| GATCATCAGAGCAGGTGCAT+TGG | 0.542145 | 3.2:+78546511 | MS.gene06556:CDS |
| ATTGATGTCTGCATCTGGCC+GGG | 0.542391 | 3.2:-78546248 | None:intergenic |
| ATACGCCCAACTGCTGTCCA+AGG | 0.547866 | 3.2:+78547575 | MS.gene06556:CDS |
| CTCTGTCTCCCAATGTCCAG+TGG | 0.551409 | 3.2:+78547477 | MS.gene06556:CDS |
| TAATCTCTGGCATGGATGGA+AGG | 0.552266 | 3.2:+78548447 | MS.gene06556:CDS |
| GCTTCACTCTGACAACGGAC+GGG | 0.555040 | 3.2:+78546812 | MS.gene06556:CDS |
| ACTTCTCCTTTGTGACGACC+TGG | 0.555547 | 3.2:-78546724 | None:intergenic |
| GATGAAGTAGTACAGGCCCT+TGG | 0.557475 | 3.2:-78547592 | None:intergenic |
| TCTTGCAACTGCTAGTGAGA+AGG | 0.557640 | 3.2:+78546840 | MS.gene06556:CDS |
| GAGAGTGAGGGTGTTTGGGG+AGG | 0.558785 | 3.2:+78547544 | MS.gene06556:CDS |
| ATTGTGAATACCCCAATAGT+GGG | 0.562593 | 3.2:+78546209 | MS.gene06556:CDS |
| CTTGAGAGTGAGGGTGTTTG+GGG | 0.564799 | 3.2:+78547541 | MS.gene06556:CDS |
| CGTGTAGGTTAGAAGAGGGG+TGG | 0.568066 | 3.2:+78547430 | MS.gene06556:intron |
| GACGAATTGATATGAGATGA+GGG | 0.569550 | 3.2:-78546142 | None:intergenic |
| CACTGTCCTAATCTCTGGCA+TGG | 0.571130 | 3.2:+78548439 | MS.gene06556:CDS |
| ACGAATTGATATGAGATGAG+GGG | 0.571530 | 3.2:-78546141 | None:intergenic |
| CTACAGCACCAACAAGCGCT+AGG | 0.572951 | 3.2:-78546447 | None:intergenic |
| TCATCATTATCTTTCATGAG+AGG | 0.573870 | 3.2:+78547674 | MS.gene06556:CDS |
| TGCATGCTTCACTCTGACAA+CGG | 0.580675 | 3.2:+78546807 | MS.gene06556:CDS |
| TGCTGCCAACCACTGGACAT+TGG | 0.582381 | 3.2:-78547486 | None:intergenic |
| TTTGGGATGATCATCAGAGC+AGG | 0.585812 | 3.2:+78546503 | MS.gene06556:CDS |
| GAATCTTCAATACAATGGAT+GGG | 0.589619 | 3.2:+78546875 | MS.gene06556:CDS |
| ATATATTCAACTTGAGAGTG+AGG | 0.590254 | 3.2:+78547531 | MS.gene06556:CDS |
| AGATAATGATGAATTGGGGT+TGG | 0.592572 | 3.2:-78547663 | None:intergenic |
| AAGATGAGGCCCCACTATTG+GGG | 0.595901 | 3.2:-78546219 | None:intergenic |
| TCTCACTAGCAGTTGCAAGA+AGG | 0.597081 | 3.2:-78546837 | None:intergenic |
| CGAATTGATATGAGATGAGG+GGG | 0.598276 | 3.2:-78546140 | None:intergenic |
| GATTAGAATCTTCAATACAA+TGG | 0.601484 | 3.2:+78546870 | MS.gene06556:CDS |
| AGACGAATTGATATGAGATG+AGG | 0.607029 | 3.2:-78546143 | None:intergenic |
| TATATTCAACTTGAGAGTGA+GGG | 0.607920 | 3.2:+78547532 | MS.gene06556:CDS |
| TCTATCGTGTAGGTTAGAAG+AGG | 0.613791 | 3.2:+78547425 | MS.gene06556:intron |
| CAGCTTTGATCAAGTAAATG+GGG | 0.615526 | 3.2:+78549381 | MS.gene06556:CDS |
| TACGCCCAACTGCTGTCCAA+GGG | 0.621281 | 3.2:+78547576 | MS.gene06556:CDS |
| GTTTCATGGAATCAGGACTA+CGG | 0.621760 | 3.2:+78546298 | MS.gene06556:CDS |
| TGGCCGGGAAAGAGAAGATG+AGG | 0.624207 | 3.2:-78546233 | None:intergenic |
| TGAAAACACTAAATTCATTG+TGG | 0.629098 | 3.2:+78548400 | MS.gene06556:CDS |
| GCTTGTCCAGGTCGTCACAA+AGG | 0.632605 | 3.2:+78546718 | MS.gene06556:CDS |
| CCGGTATTTGGAGAAATCAA+GGG | 0.637476 | 3.2:-78547638 | None:intergenic |
| CAAGCGCTAGGATGTTGCTA+CGG | 0.644150 | 3.2:-78546435 | None:intergenic |
| TTGGCAGCATCAAGTGACAA+AGG | 0.665997 | 3.2:+78547500 | MS.gene06556:CDS |
| GATACTATGGCAAATCCTAG+GGG | 0.691243 | 3.2:+78546655 | MS.gene06556:CDS |
| TGAAAGATAATGATGAATTG+GGG | 0.693897 | 3.2:-78547667 | None:intergenic |
| AGCTTTGATCAAGTAAATGG+GGG | 0.695560 | 3.2:+78549382 | MS.gene06556:CDS |
| TATCGTGTAGGTTAGAAGAG+GGG | 0.696069 | 3.2:+78547427 | MS.gene06556:intron |
| TTGTGAATACCCCAATAGTG+GGG | 0.696105 | 3.2:+78546210 | MS.gene06556:CDS |
| ATACTATGGCAAATCCTAGG+GGG | 0.718473 | 3.2:+78546656 | MS.gene06556:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATCTTGACATTTATAATTA+TGG | + | chr3.2:78548991-78549010 | MS.gene06556:intron | 15.0% |
| !! | CAAATTATGATAATAATTTC+AGG | - | chr3.2:78547731-78547750 | None:intergenic | 15.0% |
| !! | CTGAAATTATTATCATAATT+TGG | + | chr3.2:78547729-78547748 | MS.gene06556:intron | 15.0% |
| !! | GACAAATATTAATAAGTTAA+TGG | + | chr3.2:78548751-78548770 | MS.gene06556:intron | 15.0% |
| !!! | ATCTGAAATATATTATTTTG+AGG | - | chr3.2:78549216-78549235 | None:intergenic | 15.0% |
| !!! | ATTTAATTTTTGAAAGAACA+GGG | - | chr3.2:78548519-78548538 | None:intergenic | 15.0% |
| !!! | TATTTTCATATCTATATATG+AGG | + | chr3.2:78547001-78547020 | MS.gene06556:intron | 15.0% |
| !! | AAAAATATCACATGATTCAA+TGG | - | chr3.2:78548684-78548703 | None:intergenic | 20.0% |
| !! | AAATTGTAACATGAAATCAA+CGG | - | chr3.2:78549187-78549206 | None:intergenic | 20.0% |
| !! | ACATAAAAAAGATCAAAAGT+AGG | + | chr3.2:78547956-78547975 | MS.gene06556:intron | 20.0% |
| !! | ACCTAAAAACTATCTAAAAA+CGG | - | chr3.2:78547831-78547850 | None:intergenic | 20.0% |
| !! | AGATATGAAAATAAAAAACC+TGG | - | chr3.2:78546994-78547013 | None:intergenic | 20.0% |
| !! | ATATTTCCAAATTCAATGAT+CGG | + | chr3.2:78546184-78546203 | MS.gene06556:CDS | 20.0% |
| !! | ATGAAAGATAATGATGAATT+GGG | - | chr3.2:78547671-78547690 | None:intergenic | 20.0% |
| !! | CATAAAAAAGATCAAAAGTA+GGG | + | chr3.2:78547957-78547976 | MS.gene06556:intron | 20.0% |
| !! | CTTTCAAAAATTAAATCCTT+AGG | + | chr3.2:78548523-78548542 | MS.gene06556:intron | 20.0% |
| !! | GATATATGTTTATAACTTCA+TGG | + | chr3.2:78546609-78546628 | MS.gene06556:CDS | 20.0% |
| !! | GATATGAAAATAAAAAACCT+GGG | - | chr3.2:78546993-78547012 | None:intergenic | 20.0% |
| !! | TTTGAAAATGTAAAAACCTA+AGG | - | chr3.2:78548542-78548561 | None:intergenic | 20.0% |
| !!! | AAGTTTTAATAGTTATTCAG+CGG | + | chr3.2:78549026-78549045 | MS.gene06556:intron | 20.0% |
| !!! | CAAAATATTTTAGTTCAGAA+TGG | + | chr3.2:78548354-78548373 | MS.gene06556:CDS | 20.0% |
| !!! | CATTCTGAACTAAAATATTT+TGG | - | chr3.2:78548356-78548375 | None:intergenic | 20.0% |
| !!! | CTATTGAAATTATTGGTTTA+TGG | + | chr3.2:78548598-78548617 | MS.gene06556:intron | 20.0% |
| !!! | GATTTAATTTTTGAAAGAAC+AGG | - | chr3.2:78548520-78548539 | None:intergenic | 20.0% |
| !!! | TACATTTTCAAATAATGTTG+AGG | + | chr3.2:78548550-78548569 | MS.gene06556:intron | 20.0% |
| !!! | TAGAATACAATTTTACAATC+CGG | + | chr3.2:78548658-78548677 | MS.gene06556:intron | 20.0% |
| !!! | TGTTTGTTTTATCATTCTTT+TGG | + | chr3.2:78548115-78548134 | MS.gene06556:intron | 20.0% |
| !!! | TTGTGAATTTTTTTATTGTG+TGG | + | chr3.2:78547152-78547171 | MS.gene06556:intron | 20.0% |
| !!! | TTTAATTTTTGAAAGAACAG+GGG | - | chr3.2:78548518-78548537 | None:intergenic | 20.0% |
| !!! | TTTGTTTGAAAGTATATTGT+TGG | + | chr3.2:78548951-78548970 | MS.gene06556:intron | 20.0% |
| ! | AAAATAAAAAACCTGGGAAA+TGG | - | chr3.2:78546987-78547006 | None:intergenic | 25.0% |
| ! | AAGTATTTGAATTGGTAAAC+TGG | - | chr3.2:78547777-78547796 | None:intergenic | 25.0% |
| ! | AGAGAACATCCATAAATATA+TGG | - | chr3.2:78548219-78548238 | None:intergenic | 25.0% |
| ! | ATCCCAAATCAAAACTTTAT+TGG | - | chr3.2:78546491-78546510 | None:intergenic | 25.0% |
| ! | CAAAAAACAAGTTGTATGTA+AGG | - | chr3.2:78549343-78549362 | None:intergenic | 25.0% |
| ! | CATGAAAGATAATGATGAAT+TGG | - | chr3.2:78547672-78547691 | None:intergenic | 25.0% |
| ! | CCATAACAAATGTATTTGAA+TGG | - | chr3.2:78546699-78546718 | None:intergenic | 25.0% |
| ! | GAAATTAATGTATCCTTTGT+AGG | + | chr3.2:78549244-78549263 | MS.gene06556:intron | 25.0% |
| ! | GAGAACATCCATAAATATAT+GGG | - | chr3.2:78548218-78548237 | None:intergenic | 25.0% |
| ! | GATTAGAATCTTCAATACAA+TGG | + | chr3.2:78546870-78546889 | MS.gene06556:CDS | 25.0% |
| ! | TAGATTCAAATGTCTCAATT+AGG | - | chr3.2:78548908-78548927 | None:intergenic | 25.0% |
| ! | TAGTAGAACCCATATATTTA+TGG | + | chr3.2:78548207-78548226 | MS.gene06556:intron | 25.0% |
| ! | TCCCAAATCAAAACTTTATT+GGG | - | chr3.2:78546490-78546509 | None:intergenic | 25.0% |
| ! | TCTTCATCAAATTGATACTA+TGG | + | chr3.2:78546642-78546661 | MS.gene06556:CDS | 25.0% |
| ! | TGAAAACAAATTACACATGT+GGG | - | chr3.2:78549073-78549092 | None:intergenic | 25.0% |
| ! | TGAAAACACTAAATTCATTG+TGG | + | chr3.2:78548400-78548419 | MS.gene06556:CDS | 25.0% |
| ! | TGAAAGATAATGATGAATTG+GGG | - | chr3.2:78547670-78547689 | None:intergenic | 25.0% |
| ! | TGGAAAGTTCAACATATTAA+TGG | - | chr3.2:78546953-78546972 | None:intergenic | 25.0% |
| ! | TTGAAAACAAATTACACATG+TGG | - | chr3.2:78549074-78549093 | None:intergenic | 25.0% |
| ! | TTGCATGCTATTGAAATTAT+TGG | + | chr3.2:78548591-78548610 | MS.gene06556:intron | 25.0% |
| ! | TTTAAGAATGATCAAGAATC+AGG | - | chr3.2:78547184-78547203 | None:intergenic | 25.0% |
| ! | TTTCATATCTATATATGAGG+TGG | + | chr3.2:78547004-78547023 | MS.gene06556:intron | 25.0% |
| !! | AATCAATGATTTTGCACATT+AGG | + | chr3.2:78548090-78548109 | MS.gene06556:intron | 25.0% |
| !! | ACAATGAATTTAGTGTTTTC+AGG | - | chr3.2:78548401-78548420 | None:intergenic | 25.0% |
| !! | ACAATTTTCTTTGCATCTTT+TGG | + | chr3.2:78547219-78547238 | MS.gene06556:intron | 25.0% |
| !! | CCATTCAAATACATTTGTTA+TGG | + | chr3.2:78546696-78546715 | MS.gene06556:CDS | 25.0% |
| !! | GCTAAAACATTGTTATTGTA+AGG | - | chr3.2:78547251-78547270 | None:intergenic | 25.0% |
| !! | GGAAAATTGCATGATATTTT+TGG | + | chr3.2:78548274-78548293 | MS.gene06556:intron | 25.0% |
| !! | TGAAAATGTTTTACTTGACT+TGG | - | chr3.2:78547129-78547148 | None:intergenic | 25.0% |
| !! | TGCTCTATTAGATTTACTTT+TGG | + | chr3.2:78548014-78548033 | MS.gene06556:intron | 25.0% |
| !! | TTTGAAAGTATATTGTTGGA+TGG | + | chr3.2:78548955-78548974 | MS.gene06556:intron | 25.0% |
| !!! | ACCCAATAAAGTTTTGATTT+GGG | + | chr3.2:78546486-78546505 | MS.gene06556:CDS | 25.0% |
| !!! | TGTTTCTTTTTTTCCTACAA+AGG | - | chr3.2:78549260-78549279 | None:intergenic | 25.0% |
| !!! | TTAATTTTTGAAAGAACAGG+GGG | - | chr3.2:78548517-78548536 | None:intergenic | 25.0% |
| !!! | TTGTTAGCTTACTTTTAAGA+TGG | + | chr3.2:78548253-78548272 | MS.gene06556:intron | 25.0% |
| !!! | TTTTTAGGTCTTCATCATTT+AGG | + | chr3.2:78547842-78547861 | MS.gene06556:intron | 25.0% |
| AAGATCAAACTGAATCCTAT+TGG | - | chr3.2:78547367-78547386 | None:intergenic | 30.0% | |
| ACTAAATTCATTGTGGCATT+TGG | + | chr3.2:78548407-78548426 | MS.gene06556:CDS | 30.0% | |
| AGAATCTTCAATACAATGGA+TGG | + | chr3.2:78546874-78546893 | MS.gene06556:CDS | 30.0% | |
| ATATATTCAACTTGAGAGTG+AGG | + | chr3.2:78547531-78547550 | MS.gene06556:CDS | 30.0% | |
| ATTGTTTCCAGAGAGAAAAT+AGG | - | chr3.2:78548321-78548340 | None:intergenic | 30.0% | |
| CAAATCAAAACTTTATTGGG+TGG | - | chr3.2:78546487-78546506 | None:intergenic | 30.0% | |
| CAATTTCCGATCATTGAATT+TGG | - | chr3.2:78546193-78546212 | None:intergenic | 30.0% | |
| CTCTCTTCATTTAATGAACT+TGG | + | chr3.2:78549298-78549317 | MS.gene06556:intron | 30.0% | |
| GAATCTTCAATACAATGGAT+GGG | + | chr3.2:78546875-78546894 | MS.gene06556:CDS | 30.0% | |
| GATGTTATTACATGCTTGAA+AGG | - | chr3.2:78548184-78548203 | None:intergenic | 30.0% | |
| GATTATTGAACACGAAAAGA+GGG | - | chr3.2:78547399-78547418 | None:intergenic | 30.0% | |
| GGGAAATGGAAAATATGAAA+TGG | - | chr3.2:78546973-78546992 | None:intergenic | 30.0% | |
| TATATTCAACTTGAGAGTGA+GGG | + | chr3.2:78547532-78547551 | MS.gene06556:CDS | 30.0% | |
| TCATCATTATCTTTCATGAG+AGG | + | chr3.2:78547674-78547693 | MS.gene06556:CDS | 30.0% | |
| TCATCATTTAGGAAACTTGA+TGG | + | chr3.2:78547853-78547872 | MS.gene06556:intron | 30.0% | |
| TTCATAAAAACAGGAGACTT+CGG | - | chr3.2:78547911-78547930 | None:intergenic | 30.0% | |
| ! | ATTTTCTTTGCATCTTTTGG+AGG | + | chr3.2:78547222-78547241 | MS.gene06556:intron | 30.0% |
| ! | TTTCATATTTTCCATTTCCC+AGG | + | chr3.2:78546973-78546992 | MS.gene06556:intron | 30.0% |
| !! | AATCGATTTTTCTATCGTGT+AGG | + | chr3.2:78547415-78547434 | MS.gene06556:intron | 30.0% |
| !! | ATTTACTTTTGGATTTGTGC+AGG | + | chr3.2:78548025-78548044 | MS.gene06556:intron | 30.0% |
| !! | TTTACTTTTGGATTTGTGCA+GGG | + | chr3.2:78548026-78548045 | MS.gene06556:intron | 30.0% |
| !!! | CACCCAATAAAGTTTTGATT+TGG | + | chr3.2:78546485-78546504 | MS.gene06556:CDS | 30.0% |
| !!! | GCCGTTTTTAGATAGTTTTT+AGG | + | chr3.2:78547827-78547846 | MS.gene06556:intron | 30.0% |
| !!! | TTTTGGTTTATGAGTTATCC+AGG | + | chr3.2:78548132-78548151 | MS.gene06556:intron | 30.0% |
| AACCTTTCAAAGAGACTTTC+AGG | + | chr3.2:78546368-78546387 | MS.gene06556:CDS | 35.0% | |
| AACTTTATTGGGTGGATAGT+TGG | - | chr3.2:78546479-78546498 | None:intergenic | 35.0% | |
| AAGTGGAACTTCTTTCCAAT+AGG | + | chr3.2:78547349-78547368 | MS.gene06556:intron | 35.0% | |
| AATTGTGAATACCCCAATAG+TGG | + | chr3.2:78546208-78546227 | MS.gene06556:CDS | 35.0% | |
| ACAAGTTGTATGTAAGGATG+AGG | - | chr3.2:78549337-78549356 | None:intergenic | 35.0% | |
| ACGAATTGATATGAGATGAG+GGG | - | chr3.2:78546144-78546163 | None:intergenic | 35.0% | |
| AGACGAATTGATATGAGATG+AGG | - | chr3.2:78546146-78546165 | None:intergenic | 35.0% | |
| AGATAATGATGAATTGGGGT+TGG | - | chr3.2:78547666-78547685 | None:intergenic | 35.0% | |
| AGCTGGCTAAGTATTTGAAT+TGG | - | chr3.2:78547785-78547804 | None:intergenic | 35.0% | |
| ATATCACATGATTCAATGGC+CGG | - | chr3.2:78548680-78548699 | None:intergenic | 35.0% | |
| ATCAAAGATGTAATGCTACC+TGG | - | chr3.2:78548153-78548172 | None:intergenic | 35.0% | |
| ATTGTGAATACCCCAATAGT+GGG | + | chr3.2:78546209-78546228 | MS.gene06556:CDS | 35.0% | |
| CGATTATTGAACACGAAAAG+AGG | - | chr3.2:78547400-78547419 | None:intergenic | 35.0% | |
| GAATTCTGATGAAGTAGTAC+AGG | - | chr3.2:78547602-78547621 | None:intergenic | 35.0% | |
| GACGAATTGATATGAGATGA+GGG | - | chr3.2:78546145-78546164 | None:intergenic | 35.0% | |
| GGTAAACTGGAAAAGATGAT+TGG | - | chr3.2:78547764-78547783 | None:intergenic | 35.0% | |
| TGATACTATGGCAAATCCTA+GGG | + | chr3.2:78546654-78546673 | MS.gene06556:CDS | 35.0% | |
| TTAAGCTGTATGTCTACAGT+TGG | - | chr3.2:78548851-78548870 | None:intergenic | 35.0% | |
| TTCAGGCGTGATTTAAAAAG+TGG | + | chr3.2:78546385-78546404 | MS.gene06556:CDS | 35.0% | |
| TTGATACTATGGCAAATCCT+AGG | + | chr3.2:78546653-78546672 | MS.gene06556:CDS | 35.0% | |
| ! | ACATTTAGATCTGAAGTTCG+TGG | + | chr3.2:78546541-78546560 | MS.gene06556:CDS | 35.0% |
| ! | AGCTTTGATCAAGTAAATGG+GGG | + | chr3.2:78549382-78549401 | MS.gene06556:CDS | 35.0% |
| ! | CAGCTTTGATCAAGTAAATG+GGG | + | chr3.2:78549381-78549400 | MS.gene06556:CDS | 35.0% |
| ! | GCAGCTTTGATCAAGTAAAT+GGG | + | chr3.2:78549380-78549399 | MS.gene06556:CDS | 35.0% |
| ! | GTTCTTACCTATTTTCTCTC+TGG | + | chr3.2:78548311-78548330 | MS.gene06556:intron | 35.0% |
| ! | TCATGTAAGATGATTTGTGC+AGG | - | chr3.2:78548070-78548089 | None:intergenic | 35.0% |
| ! | TGCAGCTTTGATCAAGTAAA+TGG | + | chr3.2:78549379-78549398 | MS.gene06556:CDS | 35.0% |
| ! | TTTTACGCCTCAACATTCTT+GGG | + | chr3.2:78547307-78547326 | MS.gene06556:intron | 35.0% |
| !! | ATTTAGTGTTTTCAGGCAAG+TGG | - | chr3.2:78548394-78548413 | None:intergenic | 35.0% |
| !! | CTGATTTGTTCTCAGTTTCA+TGG | + | chr3.2:78546284-78546303 | MS.gene06556:CDS | 35.0% |
| !! | TTATTGGTTTATGGTGATCC+AGG | + | chr3.2:78548607-78548626 | MS.gene06556:intron | 35.0% |
| ACCGGTATTTGGAGAAATCA+AGG | - | chr3.2:78547642-78547661 | None:intergenic | 40.0% | |
| AGCATGCAATTTGGGAATCA+TGG | - | chr3.2:78546795-78546814 | None:intergenic | 40.0% | |
| AGGCGTGATTTAAAAAGTGG+CGG | + | chr3.2:78546388-78546407 | MS.gene06556:CDS | 40.0% | |
| ATACTATGGCAAATCCTAGG+GGG | + | chr3.2:78546656-78546675 | MS.gene06556:CDS | 40.0% | |
| CAGAGTGAAGCATGCAATTT+GGG | - | chr3.2:78546803-78546822 | None:intergenic | 40.0% | |
| CCAGCACAGTTCATAAAAAC+AGG | - | chr3.2:78547920-78547939 | None:intergenic | 40.0% | |
| CCCTTGATTTCTCCAAATAC+CGG | + | chr3.2:78547638-78547657 | MS.gene06556:CDS | 40.0% | |
| CCGGTATTTGGAGAAATCAA+GGG | - | chr3.2:78547641-78547660 | None:intergenic | 40.0% | |
| CGAATTGATATGAGATGAGG+GGG | - | chr3.2:78546143-78546162 | None:intergenic | 40.0% | |
| CTATCGTGTAGGTTAGAAGA+GGG | + | chr3.2:78547426-78547445 | MS.gene06556:intron | 40.0% | |
| GATACTATGGCAAATCCTAG+GGG | + | chr3.2:78546655-78546674 | MS.gene06556:CDS | 40.0% | |
| GCATGCAATTTGGGAATCAT+GGG | - | chr3.2:78546794-78546813 | None:intergenic | 40.0% | |
| GTAGCTTGATTGCGAGTTAA+GGG | - | chr3.2:78548886-78548905 | None:intergenic | 40.0% | |
| GTTCTCAGTTTCATGGAATC+AGG | + | chr3.2:78546291-78546310 | MS.gene06556:CDS | 40.0% | |
| GTTTCATGGAATCAGGACTA+CGG | + | chr3.2:78546298-78546317 | MS.gene06556:CDS | 40.0% | |
| TATCGTGTAGGTTAGAAGAG+GGG | + | chr3.2:78547427-78547446 | MS.gene06556:intron | 40.0% | |
| TCAAATACTTAGCCAGCTCA+GGG | + | chr3.2:78547787-78547806 | MS.gene06556:intron | 40.0% | |
| TCAATTATACAAGCCCAACC+TGG | - | chr3.2:78548628-78548647 | None:intergenic | 40.0% | |
| TCAGAGTGAAGCATGCAATT+TGG | - | chr3.2:78546804-78546823 | None:intergenic | 40.0% | |
| TCGTCTGTTTCAACATCTCA+AGG | + | chr3.2:78546160-78546179 | MS.gene06556:CDS | 40.0% | |
| TCTATCGTGTAGGTTAGAAG+AGG | + | chr3.2:78547425-78547444 | MS.gene06556:intron | 40.0% | |
| TTCAAATACTTAGCCAGCTC+AGG | + | chr3.2:78547786-78547805 | MS.gene06556:intron | 40.0% | |
| TTCCACTTCCAAAACTATCG+TGG | - | chr3.2:78547337-78547356 | None:intergenic | 40.0% | |
| TTGTGAATACCCCAATAGTG+GGG | + | chr3.2:78546210-78546229 | MS.gene06556:CDS | 40.0% | |
| ! | CTTTTACGCCTCAACATTCT+TGG | + | chr3.2:78547306-78547325 | MS.gene06556:intron | 40.0% |
| ! | TTCTCTCTGGAAACAATGCA+GGG | + | chr3.2:78548324-78548343 | MS.gene06556:intron | 40.0% |
| ! | TTTCTCTCTGGAAACAATGC+AGG | + | chr3.2:78548323-78548342 | MS.gene06556:intron | 40.0% |
| !! | ACATTTGTTATGGCTTGTCC+AGG | + | chr3.2:78546706-78546725 | MS.gene06556:CDS | 40.0% |
| !! | GAAGTTCGAGTTGAACACTT+TGG | + | chr3.2:78546742-78546761 | MS.gene06556:CDS | 40.0% |
| !!! | CCTGTTTTTATGAACTGTGC+TGG | + | chr3.2:78547917-78547936 | MS.gene06556:intron | 40.0% |
| CAGAACACTGTCCTAATCTC+TGG | + | chr3.2:78548434-78548453 | MS.gene06556:CDS | 45.0% | |
| CATAATATAGCTCCCTGAGC+TGG | - | chr3.2:78547802-78547821 | None:intergenic | 45.0% | |
| CGCCTGAAAGTCTCTTTGAA+AGG | - | chr3.2:78546373-78546392 | None:intergenic | 45.0% | |
| CTGTCATTGATGTCTGCATC+TGG | - | chr3.2:78546256-78546275 | None:intergenic | 45.0% | |
| CTTGCAACTGCTAGTGAGAA+GGG | + | chr3.2:78546841-78546860 | MS.gene06556:CDS | 45.0% | |
| GGGTCTCGTTTACAAGAAGT+AGG | + | chr3.2:78546895-78546914 | MS.gene06556:intron | 45.0% | |
| GGTAGCTTGATTGCGAGTTA+AGG | - | chr3.2:78548887-78548906 | None:intergenic | 45.0% | |
| GGTTTATGGTGATCCAGGTT+GGG | + | chr3.2:78548612-78548631 | MS.gene06556:intron | 45.0% | |
| TAATCTCTGGCATGGATGGA+AGG | + | chr3.2:78548447-78548466 | MS.gene06556:CDS | 45.0% | |
| TCAGGTGCTCTGCATTACAA+AGG | - | chr3.2:78547713-78547732 | None:intergenic | 45.0% | |
| TCTCACTAGCAGTTGCAAGA+AGG | - | chr3.2:78546840-78546859 | None:intergenic | 45.0% | |
| TCTTGCAACTGCTAGTGAGA+AGG | + | chr3.2:78546840-78546859 | MS.gene06556:CDS | 45.0% | |
| TGCATGCTTCACTCTGACAA+CGG | + | chr3.2:78546807-78546826 | MS.gene06556:CDS | 45.0% | |
| TGGACAACCCAAGAATGTTG+AGG | - | chr3.2:78547317-78547336 | None:intergenic | 45.0% | |
| TGGTTTATGGTGATCCAGGT+TGG | + | chr3.2:78548611-78548630 | MS.gene06556:intron | 45.0% | |
| TTAGCTGCTGGAACAAGTCA+TGG | + | chr3.2:78546325-78546344 | MS.gene06556:CDS | 45.0% | |
| TTCCATCCATGCCAGAGATT+AGG | - | chr3.2:78548448-78548467 | None:intergenic | 45.0% | |
| TTGGCAGCATCAAGTGACAA+AGG | + | chr3.2:78547500-78547519 | MS.gene06556:CDS | 45.0% | |
| ! | TCTCTCTGGAAACAATGCAG+GGG | + | chr3.2:78548325-78548344 | MS.gene06556:intron | 45.0% |
| ! | TGGGTTGTCCACGATAGTTT+TGG | + | chr3.2:78547326-78547345 | MS.gene06556:intron | 45.0% |
| ! | TTTGGGATGATCATCAGAGC+AGG | + | chr3.2:78546503-78546522 | MS.gene06556:CDS | 45.0% |
| !! | AACTTGAGAGTGAGGGTGTT+TGG | + | chr3.2:78547539-78547558 | MS.gene06556:CDS | 45.0% |
| !! | ACTTGAGAGTGAGGGTGTTT+GGG | + | chr3.2:78547540-78547559 | MS.gene06556:CDS | 45.0% |
| !!! | GTCCACGATAGTTTTGGAAG+TGG | + | chr3.2:78547332-78547351 | MS.gene06556:intron | 45.0% |
| AAGATGAGGCCCCACTATTG+GGG | - | chr3.2:78546222-78546241 | None:intergenic | 50.0% | |
| ACTTCTCCTTTGTGACGACC+TGG | - | chr3.2:78546727-78546746 | None:intergenic | 50.0% | |
| AGAAGATGAGGCCCCACTAT+TGG | - | chr3.2:78546224-78546243 | None:intergenic | 50.0% | |
| AGCAACATCCTAGCGCTTGT+TGG | + | chr3.2:78546439-78546458 | MS.gene06556:CDS | 50.0% | |
| AGGTTAGAAGAGGGGTGGAT+AGG | + | chr3.2:78547435-78547454 | MS.gene06556:intron | 50.0% | |
| ATTGATGTCTGCATCTGGCC+GGG | - | chr3.2:78546251-78546270 | None:intergenic | 50.0% | |
| CAAGCGCTAGGATGTTGCTA+CGG | - | chr3.2:78546438-78546457 | None:intergenic | 50.0% | |
| CACTGTCCTAATCTCTGGCA+TGG | + | chr3.2:78548439-78548458 | MS.gene06556:CDS | 50.0% | |
| CATTGATGTCTGCATCTGGC+CGG | - | chr3.2:78546252-78546271 | None:intergenic | 50.0% | |
| GAAGATGAGGCCCCACTATT+GGG | - | chr3.2:78546223-78546242 | None:intergenic | 50.0% | |
| GATCATCAGAGCAGGTGCAT+TGG | + | chr3.2:78546511-78546530 | MS.gene06556:CDS | 50.0% | |
| GATGAAGTAGTACAGGCCCT+TGG | - | chr3.2:78547595-78547614 | None:intergenic | 50.0% | |
| GGTTAGAAGAGGGGTGGATA+GGG | + | chr3.2:78547436-78547455 | MS.gene06556:intron | 50.0% | |
| GTCCTAATCTCTGGCATGGA+TGG | + | chr3.2:78548443-78548462 | MS.gene06556:CDS | 50.0% | |
| TGCTTCACTCTGACAACGGA+CGG | + | chr3.2:78546811-78546830 | MS.gene06556:CDS | 50.0% | |
| ! | TGATGAATTGGGGTTGGCAC+CGG | - | chr3.2:78547660-78547679 | None:intergenic | 50.0% |
| !! | CTTGAGAGTGAGGGTGTTTG+GGG | + | chr3.2:78547541-78547560 | MS.gene06556:CDS | 50.0% |
| ATACGCCCAACTGCTGTCCA+AGG | + | chr3.2:78547575-78547594 | MS.gene06556:CDS | 55.0% | |
| CACTTGATGCTGCCAACCAC+TGG | - | chr3.2:78547496-78547515 | None:intergenic | 55.0% | |
| CGTGTAGGTTAGAAGAGGGG+TGG | + | chr3.2:78547430-78547449 | MS.gene06556:intron | 55.0% | |
| CTACAGCACCAACAAGCGCT+AGG | - | chr3.2:78546450-78546469 | None:intergenic | 55.0% | |
| CTCTGTCTCCCAATGTCCAG+TGG | + | chr3.2:78547477-78547496 | MS.gene06556:CDS | 55.0% | |
| GAAAGACAGCACAACCCCCT+AGG | - | chr3.2:78546673-78546692 | None:intergenic | 55.0% | |
| GACTACGGTTGCTTAGCTGC+TGG | + | chr3.2:78546313-78546332 | MS.gene06556:CDS | 55.0% | |
| GCTGCCAACCACTGGACATT+GGG | - | chr3.2:78547488-78547507 | None:intergenic | 55.0% | |
| GCTTCACTCTGACAACGGAC+GGG | + | chr3.2:78546812-78546831 | MS.gene06556:CDS | 55.0% | |
| GCTTGTCCAGGTCGTCACAA+AGG | + | chr3.2:78546718-78546737 | MS.gene06556:CDS | 55.0% | |
| GGGCCTCATCTTCTCTTTCC+CGG | + | chr3.2:78546230-78546249 | MS.gene06556:CDS | 55.0% | |
| GTCTCCCAATGTCCAGTGGT+TGG | + | chr3.2:78547481-78547500 | MS.gene06556:CDS | 55.0% | |
| TACGCCCAACTGCTGTCCAA+GGG | + | chr3.2:78547576-78547595 | MS.gene06556:CDS | 55.0% | |
| TCAACGGCAAAGCATGCGTG+AGG | - | chr3.2:78549171-78549190 | None:intergenic | 55.0% | |
| TGCTGCCAACCACTGGACAT+TGG | - | chr3.2:78547489-78547508 | None:intergenic | 55.0% | |
| TGGCCGGGAAAGAGAAGATG+AGG | - | chr3.2:78546236-78546255 | None:intergenic | 55.0% | |
| TGGGGGAGAGATGTTGCAGA+AGG | + | chr3.2:78549399-78549418 | MS.gene06556:CDS | 55.0% | |
| !! | TTGGGGTTGGCACCGGTATT+TGG | - | chr3.2:78547653-78547672 | None:intergenic | 55.0% |
| ACAGGCCCTTGGACAGCAGT+TGG | - | chr3.2:78547584-78547603 | None:intergenic | 60.0% | |
| CACTCAGCTGACGAGTCAGC+AGG | - | chr3.2:78548485-78548504 | None:intergenic | 60.0% | |
| CAGGCCCTTGGACAGCAGTT+GGG | - | chr3.2:78547583-78547602 | None:intergenic | 60.0% | |
| CGGCAAAGCATGCGTGAGGA+AGG | - | chr3.2:78549167-78549186 | None:intergenic | 60.0% | |
| !! | GAGAGTGAGGGTGTTTGGGG+AGG | + | chr3.2:78547544-78547563 | MS.gene06556:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.2 | gene | 78546127 | 78549447 | 78546127 | ID=MS.gene06556 |
| chr3.2 | mRNA | 78546127 | 78549447 | 78546127 | ID=MS.gene06556.t1;Parent=MS.gene06556 |
| chr3.2 | exon | 78546127 | 78546912 | 78546127 | ID=MS.gene06556.t1.exon1;Parent=MS.gene06556.t1 |
| chr3.2 | CDS | 78546127 | 78546912 | 78546127 | ID=cds.MS.gene06556.t1;Parent=MS.gene06556.t1 |
| chr3.2 | exon | 78547437 | 78547695 | 78547437 | ID=MS.gene06556.t1.exon2;Parent=MS.gene06556.t1 |
| chr3.2 | CDS | 78547437 | 78547695 | 78547437 | ID=cds.MS.gene06556.t1;Parent=MS.gene06556.t1 |
| chr3.2 | exon | 78548345 | 78548468 | 78548345 | ID=MS.gene06556.t1.exon3;Parent=MS.gene06556.t1 |
| chr3.2 | CDS | 78548345 | 78548468 | 78548345 | ID=cds.MS.gene06556.t1;Parent=MS.gene06556.t1 |
| chr3.2 | exon | 78549369 | 78549447 | 78549369 | ID=MS.gene06556.t1.exon4;Parent=MS.gene06556.t1 |
| chr3.2 | CDS | 78549369 | 78549447 | 78549369 | ID=cds.MS.gene06556.t1;Parent=MS.gene06556.t1 |
| Gene Sequence |
| Protein sequence |
