Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene049425.t1 | XP_013461473.1 | 97.8 | 367 | 8 | 0 | 1 | 367 | 25 | 391 | 8.20E-209 | 736.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene049425.t1 | Q0WPK3 | 74.2 | 365 | 83 | 2 | 3 | 367 | 10 | 363 | 1.8e-156 | 553.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene049425.t1 | A0A072V2C7 | 97.8 | 367 | 8 | 0 | 1 | 367 | 25 | 391 | 5.9e-209 | 736.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049217 | MS.gene049425 | -0.828012 | 1.14E-54 | -1.69E-46 |
| MS.gene049265 | MS.gene049425 | 0.864593 | 1.09E-64 | -1.69E-46 |
| MS.gene049425 | MS.gene050475 | 0.835298 | 1.82E-56 | -1.69E-46 |
| MS.gene049425 | MS.gene050541 | 0.835182 | 1.95E-56 | -1.69E-46 |
| MS.gene049425 | MS.gene051858 | -0.8358 | 1.36E-56 | -1.69E-46 |
| MS.gene049425 | MS.gene052379 | -0.810963 | 8.88E-51 | -1.69E-46 |
| MS.gene049425 | MS.gene053322 | -0.806285 | 8.86E-50 | -1.69E-46 |
| MS.gene049425 | MS.gene055206 | -0.809063 | 2.28E-50 | -1.69E-46 |
| MS.gene049425 | MS.gene05592 | -0.814565 | 1.44E-51 | -1.69E-46 |
| MS.gene049425 | MS.gene059902 | -0.839771 | 1.30E-57 | -1.69E-46 |
| MS.gene049425 | MS.gene060818 | -0.815953 | 7.10E-52 | -1.69E-46 |
| MS.gene049425 | MS.gene061929 | -0.818789 | 1.63E-52 | -1.69E-46 |
| MS.gene049425 | MS.gene06226 | -0.804495 | 2.10E-49 | -1.69E-46 |
| MS.gene049425 | MS.gene06332 | -0.820658 | 6.11E-53 | -1.69E-46 |
| MS.gene049425 | MS.gene065537 | -0.816261 | 6.06E-52 | -1.69E-46 |
| MS.gene049425 | MS.gene06556 | 0.944863 | 8.90E-104 | -1.69E-46 |
| MS.gene049425 | MS.gene066706 | 0.811377 | 7.22E-51 | -1.69E-46 |
| MS.gene049425 | MS.gene06798 | 0.929521 | 6.17E-93 | -1.69E-46 |
| MS.gene049425 | MS.gene068043 | 0.804 | 2.67E-49 | -1.69E-46 |
| MS.gene049425 | MS.gene069976 | -0.800076 | 1.71E-48 | -1.69E-46 |
| MS.gene049425 | MS.gene07156 | 0.804285 | 2.32E-49 | -1.69E-46 |
| MS.gene049425 | MS.gene071778 | 0.856516 | 3.05E-62 | -1.69E-46 |
| MS.gene049425 | MS.gene072979 | 0.804038 | 2.62E-49 | -1.69E-46 |
| MS.gene049425 | MS.gene20808 | 0.806192 | 9.27E-50 | -1.69E-46 |
| MS.gene049425 | MS.gene21116 | -0.810208 | 1.29E-50 | -1.69E-46 |
| MS.gene049425 | MS.gene22206 | -0.800466 | 1.42E-48 | -1.69E-46 |
| MS.gene049425 | MS.gene22209 | -0.80082 | 1.20E-48 | -1.69E-46 |
| MS.gene049425 | MS.gene22384 | -0.807531 | 4.83E-50 | -1.69E-46 |
| MS.gene049425 | MS.gene23271 | -0.802007 | 6.88E-49 | -1.69E-46 |
| MS.gene049425 | MS.gene23417 | -0.812384 | 4.36E-51 | -1.69E-46 |
| MS.gene049425 | MS.gene23996 | -0.805328 | 1.41E-49 | -1.69E-46 |
| MS.gene049425 | MS.gene26624 | 0.800094 | 1.69E-48 | -1.69E-46 |
| MS.gene049425 | MS.gene27061 | -0.804274 | 2.34E-49 | -1.69E-46 |
| MS.gene049425 | MS.gene28267 | -0.815465 | 9.12E-52 | -1.69E-46 |
| MS.gene049425 | MS.gene32234 | -0.808078 | 3.70E-50 | -1.69E-46 |
| MS.gene049425 | MS.gene32758 | -0.822705 | 2.05E-53 | -1.69E-46 |
| MS.gene049425 | MS.gene33139 | 0.815298 | 9.93E-52 | -1.69E-46 |
| MS.gene049425 | MS.gene33534 | -0.809028 | 2.32E-50 | -1.69E-46 |
| MS.gene049425 | MS.gene36927 | 0.839677 | 1.37E-57 | -1.69E-46 |
| MS.gene049425 | MS.gene37538 | 0.819863 | 9.29E-53 | -1.69E-46 |
| MS.gene049425 | MS.gene39005 | -0.800301 | 1.54E-48 | -1.69E-46 |
| MS.gene049425 | MS.gene40534 | -0.806705 | 7.23E-50 | -1.69E-46 |
| MS.gene049425 | MS.gene40928 | 0.826998 | 1.99E-54 | -1.69E-46 |
| MS.gene049425 | MS.gene40958 | -0.826867 | 2.14E-54 | -1.69E-46 |
| MS.gene049425 | MS.gene41080 | -0.807308 | 5.39E-50 | -1.69E-46 |
| MS.gene049425 | MS.gene42017 | 0.820909 | 5.35E-53 | -1.69E-46 |
| MS.gene049425 | MS.gene44339 | -0.803605 | 3.22E-49 | -1.69E-46 |
| MS.gene049425 | MS.gene46942 | -0.814801 | 1.28E-51 | -1.69E-46 |
| MS.gene049425 | MS.gene48355 | -0.801479 | 8.83E-49 | -1.69E-46 |
| MS.gene049425 | MS.gene49257 | -0.803597 | 3.23E-49 | -1.69E-46 |
| MS.gene049425 | MS.gene49365 | -0.801722 | 7.87E-49 | -1.69E-46 |
| MS.gene049425 | MS.gene49716 | -0.800964 | 1.13E-48 | -1.69E-46 |
| MS.gene049425 | MS.gene50561 | -0.803918 | 2.77E-49 | -1.69E-46 |
| MS.gene049425 | MS.gene51837 | 0.800383 | 1.48E-48 | -1.69E-46 |
| MS.gene049425 | MS.gene54465 | -0.802785 | 4.76E-49 | -1.69E-46 |
| MS.gene049425 | MS.gene57569 | -0.837177 | 6.06E-57 | -1.69E-46 |
| MS.gene049425 | MS.gene58000 | -0.805495 | 1.30E-49 | -1.69E-46 |
| MS.gene049425 | MS.gene58223 | 0.80561 | 1.23E-49 | -1.69E-46 |
| MS.gene049425 | MS.gene58291 | -0.803781 | 2.96E-49 | -1.69E-46 |
| MS.gene049425 | MS.gene58293 | -0.815701 | 8.08E-52 | -1.69E-46 |
| MS.gene049425 | MS.gene59400 | 0.821977 | 3.03E-53 | -1.69E-46 |
| MS.gene049425 | MS.gene61559 | -0.803633 | 3.18E-49 | -1.69E-46 |
| MS.gene049425 | MS.gene62506 | -0.810861 | 9.34E-51 | -1.69E-46 |
| MS.gene049425 | MS.gene62752 | -0.801608 | 8.31E-49 | -1.69E-46 |
| MS.gene049425 | MS.gene62833 | 0.80275 | 4.84E-49 | -1.69E-46 |
| MS.gene049425 | MS.gene64006 | -0.800244 | 1.58E-48 | -1.69E-46 |
| MS.gene049425 | MS.gene66260 | -0.804384 | 2.22E-49 | -1.69E-46 |
| MS.gene049425 | MS.gene66460 | -0.802563 | 5.29E-49 | -1.69E-46 |
| MS.gene049425 | MS.gene68120 | -0.804827 | 1.79E-49 | -1.69E-46 |
| MS.gene049425 | MS.gene68721 | -0.805206 | 1.49E-49 | -1.69E-46 |
| MS.gene049425 | MS.gene69781 | -0.805249 | 1.46E-49 | -1.69E-46 |
| MS.gene049425 | MS.gene70171 | -0.805993 | 1.02E-49 | -1.69E-46 |
| MS.gene049425 | MS.gene70692 | -0.805784 | 1.13E-49 | -1.69E-46 |
| MS.gene049425 | MS.gene71330 | -0.800804 | 1.21E-48 | -1.69E-46 |
| MS.gene049425 | MS.gene71609 | -0.80854 | 2.95E-50 | -1.69E-46 |
| MS.gene049425 | MS.gene72284 | 0.803532 | 3.33E-49 | -1.69E-46 |
| MS.gene049425 | MS.gene75780 | -0.832559 | 8.82E-56 | -1.69E-46 |
| MS.gene049425 | MS.gene76628 | -0.832422 | 9.54E-56 | -1.69E-46 |
| MS.gene049425 | MS.gene76905 | -0.818648 | 1.76E-52 | -1.69E-46 |
| MS.gene049425 | MS.gene76907 | -0.811058 | 8.46E-51 | -1.69E-46 |
| MS.gene049425 | MS.gene76908 | -0.824397 | 8.25E-54 | -1.69E-46 |
| MS.gene049425 | MS.gene77842 | 0.801026 | 1.09E-48 | -1.69E-46 |
| MS.gene049425 | MS.gene80968 | -0.806653 | 7.41E-50 | -1.69E-46 |
| MS.gene049425 | MS.gene80969 | -0.813609 | 2.35E-51 | -1.69E-46 |
| MS.gene049425 | MS.gene80970 | -0.802354 | 5.84E-49 | -1.69E-46 |
| MS.gene049425 | MS.gene80971 | -0.800795 | 1.22E-48 | -1.69E-46 |
| MS.gene049425 | MS.gene81767 | -0.802311 | 5.96E-49 | -1.69E-46 |
| MS.gene049425 | MS.gene83767 | -0.80554 | 1.27E-49 | -1.69E-46 |
| MS.gene049425 | MS.gene85380 | -0.822426 | 2.38E-53 | -1.69E-46 |
| MS.gene049425 | MS.gene85478 | -0.811784 | 5.89E-51 | -1.69E-46 |
| MS.gene049425 | MS.gene87687 | -0.804678 | 1.92E-49 | -1.69E-46 |
| MS.gene049425 | MS.gene90788 | -0.800543 | 1.37E-48 | -1.69E-46 |
| MS.gene049425 | MS.gene91059 | -0.806245 | 9.03E-50 | -1.69E-46 |
| MS.gene049425 | MS.gene94829 | -0.804904 | 1.73E-49 | -1.69E-46 |
| MS.gene049425 | MS.gene98078 | 0.800268 | 1.56E-48 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene049425 | MS.gene013452 | PPI |
| MS.gene056055 | MS.gene049425 | PPI |
| MS.gene049425 | MS.gene06556 | PPI |
| MS.gene049425 | MS.gene44120 | PPI |
| MS.gene049425 | MS.gene06798 | PPI |
| MS.gene049425 | MS.gene005249 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene049425.t1 | MTR_3g093590 | 97.820 | 367 | 8 | 0 | 1 | 367 | 25 | 391 | 0.0 | 751 |
| MS.gene049425.t1 | MTR_1g083230 | 59.773 | 353 | 117 | 5 | 19 | 367 | 26 | 357 | 1.59e-144 | 415 |
| MS.gene049425.t1 | MTR_7g108520 | 60.896 | 335 | 113 | 5 | 36 | 367 | 71 | 390 | 2.15e-139 | 403 |
| MS.gene049425.t1 | MTR_7g108520 | 60.896 | 335 | 113 | 5 | 36 | 367 | 71 | 390 | 2.15e-139 | 403 |
| MS.gene049425.t1 | MTR_7g108520 | 66.122 | 245 | 83 | 0 | 36 | 280 | 71 | 315 | 5.03e-120 | 352 |
| MS.gene049425.t1 | MTR_1g088855 | 50.000 | 336 | 154 | 2 | 33 | 367 | 5 | 327 | 1.11e-115 | 340 |
| MS.gene049425.t1 | MTR_4g130190 | 34.538 | 249 | 156 | 4 | 31 | 274 | 15 | 261 | 3.07e-44 | 154 |
| MS.gene049425.t1 | MTR_4g130190 | 34.538 | 249 | 156 | 4 | 31 | 274 | 15 | 261 | 6.13e-43 | 152 |
| MS.gene049425.t1 | MTR_4g130190 | 34.538 | 249 | 156 | 4 | 31 | 274 | 15 | 261 | 6.36e-43 | 153 |
| MS.gene049425.t1 | MTR_4g130190 | 33.005 | 203 | 131 | 3 | 77 | 274 | 1 | 203 | 4.78e-30 | 117 |
| MS.gene049425.t1 | MTR_4g130190 | 33.005 | 203 | 131 | 3 | 77 | 274 | 1 | 203 | 5.31e-30 | 117 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene049425.t1 | AT3G56440 | 74.725 | 364 | 81 | 2 | 3 | 366 | 10 | 362 | 0.0 | 562 |
| MS.gene049425.t1 | AT3G56440 | 74.247 | 365 | 83 | 2 | 3 | 367 | 10 | 363 | 0.0 | 560 |
| MS.gene049425.t1 | AT2G40810 | 75.931 | 349 | 81 | 1 | 19 | 367 | 20 | 365 | 0.0 | 555 |
| MS.gene049425.t1 | AT2G40810 | 75.931 | 349 | 81 | 1 | 19 | 367 | 20 | 365 | 0.0 | 555 |
| MS.gene049425.t1 | AT3G56440 | 75.232 | 323 | 69 | 2 | 3 | 325 | 10 | 321 | 1.83e-177 | 496 |
| MS.gene049425.t1 | AT3G62770 | 56.948 | 367 | 134 | 5 | 4 | 366 | 50 | 396 | 2.16e-140 | 405 |
| MS.gene049425.t1 | AT3G62770 | 56.522 | 368 | 136 | 5 | 4 | 367 | 50 | 397 | 3.36e-139 | 403 |
| MS.gene049425.t1 | AT5G05150 | 50.000 | 360 | 140 | 6 | 15 | 367 | 13 | 339 | 5.31e-115 | 340 |
| MS.gene049425.t1 | AT2G40810 | 72.789 | 147 | 37 | 1 | 221 | 367 | 97 | 240 | 1.59e-67 | 214 |
| MS.gene049425.t1 | AT2G40810 | 65.116 | 86 | 30 | 0 | 19 | 104 | 20 | 105 | 8.65e-32 | 121 |
| MS.gene049425.t1 | AT4G30510 | 32.509 | 283 | 181 | 6 | 29 | 306 | 9 | 286 | 1.70e-38 | 142 |
| MS.gene049425.t1 | AT4G30510 | 32.766 | 235 | 150 | 5 | 77 | 306 | 1 | 232 | 1.49e-30 | 119 |
Find 98 sgRNAs with CRISPR-Local
Find 168 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CATTCTGAACTAAAATATTT+TGG | 0.153937 | 3.1:-74925616 | None:intergenic |
| ATCCCAAATCAAAACTTTAT+TGG | 0.177425 | 3.1:-74923751 | None:intergenic |
| TTGGGGTTGGCACCGGTATT+TGG | 0.187638 | 3.1:-74924913 | None:intergenic |
| AACCTTTCAAAGAGACTTTC+AGG | 0.219715 | 3.1:+74923631 | MS.gene049425:CDS |
| CTGATTTGTTCTCAGTTTCA+TGG | 0.238417 | 3.1:+74923547 | MS.gene049425:CDS |
| ACTAAATTCATTGTGGCATT+TGG | 0.273806 | 3.1:+74925670 | MS.gene049425:CDS |
| AACTTGAGAGTGAGGGTGTT+TGG | 0.279915 | 3.1:+74924802 | MS.gene049425:CDS |
| TCTTCATCAAATTGATACTA+TGG | 0.283426 | 3.1:+74923905 | MS.gene049425:CDS |
| TCAGAGTGAAGCATGCAATT+TGG | 0.287147 | 3.1:-74924064 | None:intergenic |
| TCCCAAATCAAAACTTTATT+GGG | 0.292270 | 3.1:-74923750 | None:intergenic |
| CATGAAAGATAATGATGAAT+TGG | 0.295519 | 3.1:-74924932 | None:intergenic |
| GATATATGTTTATAACTTCA+TGG | 0.302452 | 3.1:+74923872 | MS.gene049425:CDS |
| ACTTGAGAGTGAGGGTGTTT+GGG | 0.303097 | 3.1:+74924803 | MS.gene049425:CDS |
| CAGAGTGAAGCATGCAATTT+GGG | 0.308247 | 3.1:-74924063 | None:intergenic |
| GTTCTCAGTTTCATGGAATC+AGG | 0.310536 | 3.1:+74923554 | MS.gene049425:CDS |
| CCATTCAAATACATTTGTTA+TGG | 0.324119 | 3.1:+74923959 | MS.gene049425:CDS |
| AACTTTATTGGGTGGATAGT+TGG | 0.360324 | 3.1:-74923739 | None:intergenic |
| ATGAAAGATAATGATGAATT+GGG | 0.360564 | 3.1:-74924931 | None:intergenic |
| GAAGATGAGGCCCCACTATT+GGG | 0.364649 | 3.1:-74923483 | None:intergenic |
| CAGAGCTATACTGTTGATTT+CGG | 0.365872 | 3.1:-74924722 | None:intergenic |
| AGAAGATGAGGCCCCACTAT+TGG | 0.366717 | 3.1:-74923484 | None:intergenic |
| GGGCCTCATCTTCTCTTTCC+CGG | 0.370929 | 3.1:+74923493 | MS.gene049425:CDS |
| AGCATGCAATTTGGGAATCA+TGG | 0.405618 | 3.1:-74924055 | None:intergenic |
| CACTTGATGCTGCCAACCAC+TGG | 0.429688 | 3.1:-74924756 | None:intergenic |
| TTGATACTATGGCAAATCCT+AGG | 0.431047 | 3.1:+74923916 | MS.gene049425:CDS |
| CTGTCATTGATGTCTGCATC+TGG | 0.455833 | 3.1:-74923516 | None:intergenic |
| AATTGTGAATACCCCAATAG+TGG | 0.458125 | 3.1:+74923471 | MS.gene049425:CDS |
| AGAATCTTCAATACAATGGA+TGG | 0.459968 | 3.1:+74924137 | MS.gene049425:CDS |
| ACCGGTATTTGGAGAAATCA+AGG | 0.473373 | 3.1:-74924902 | None:intergenic |
| AGCAACATCCTAGCGCTTGT+TGG | 0.476042 | 3.1:+74923702 | MS.gene049425:CDS |
| CAGGCCCTTGGACAGCAGTT+GGG | 0.479532 | 3.1:-74924843 | None:intergenic |
| CATTGATGTCTGCATCTGGC+CGG | 0.479957 | 3.1:-74923512 | None:intergenic |
| TTCCATCCATGCCAGAGATT+AGG | 0.483661 | 3.1:-74925708 | None:intergenic |
| GCTGCCAACCACTGGACATT+GGG | 0.488358 | 3.1:-74924748 | None:intergenic |
| GAAGTTCGAGTTGAACACTT+TGG | 0.488765 | 3.1:+74924005 | MS.gene049425:CDS |
| ACATTTGTTATGGCTTGTCC+AGG | 0.490027 | 3.1:+74923969 | MS.gene049425:CDS |
| TGATACTATGGCAAATCCTA+GGG | 0.491747 | 3.1:+74923917 | MS.gene049425:CDS |
| GGTTAGAAGAGGGGTGGATA+GGG | 0.492988 | 3.1:+74924699 | MS.gene049425:intron |
| CCCTTGATTTCTCCAAATAC+CGG | 0.496555 | 3.1:+74924901 | MS.gene049425:CDS |
| AGGTTAGAAGAGGGGTGGAT+AGG | 0.498288 | 3.1:+74924698 | MS.gene049425:intron |
| GTCTCCCAATGTCCAGTGGT+TGG | 0.498399 | 3.1:+74924744 | MS.gene049425:CDS |
| ACATTTAGATCTGAAGTTCG+TGG | 0.499114 | 3.1:+74923804 | MS.gene049425:CDS |
| GTCCTAATCTCTGGCATGGA+TGG | 0.500489 | 3.1:+74925706 | MS.gene049425:CDS |
| CCATAACAAATGTATTTGAA+TGG | 0.510743 | 3.1:-74923959 | None:intergenic |
| TTAGCTGCTGGAACAAGTCA+TGG | 0.511790 | 3.1:+74923588 | MS.gene049425:CDS |
| GAATTCTGATGAAGTAGTAC+AGG | 0.516241 | 3.1:-74924862 | None:intergenic |
| CGCCTGAAAGTCTCTTTGAA+AGG | 0.516860 | 3.1:-74923633 | None:intergenic |
| CAGAACACTGTCCTAATCTC+TGG | 0.520013 | 3.1:+74925697 | MS.gene049425:CDS |
| TGCTTCACTCTGACAACGGA+CGG | 0.522941 | 3.1:+74924074 | MS.gene049425:CDS |
| CTATCGTGTAGGTTAGAAGA+GGG | 0.524773 | 3.1:+74924689 | MS.gene049425:intron |
| GCATGCAATTTGGGAATCAT+GGG | 0.526357 | 3.1:-74924054 | None:intergenic |
| ACAGGCCCTTGGACAGCAGT+TGG | 0.528221 | 3.1:-74924844 | None:intergenic |
| ATATTTCCAAATTCAATGAT+CGG | 0.530341 | 3.1:+74923447 | None:intergenic |
| CTTGCAACTGCTAGTGAGAA+GGG | 0.530985 | 3.1:+74924104 | MS.gene049425:CDS |
| TGATGAATTGGGGTTGGCAC+CGG | 0.533284 | 3.1:-74924920 | None:intergenic |
| GACTACGGTTGCTTAGCTGC+TGG | 0.535019 | 3.1:+74923576 | MS.gene049425:CDS |
| CAAATCAAAACTTTATTGGG+TGG | 0.537171 | 3.1:-74923747 | None:intergenic |
| GATCATCAGAGCAGGTGCAT+TGG | 0.542145 | 3.1:+74923774 | MS.gene049425:CDS |
| ATTGATGTCTGCATCTGGCC+GGG | 0.542391 | 3.1:-74923511 | None:intergenic |
| ATACGCCCAACTGCTGTCCA+AGG | 0.547866 | 3.1:+74924838 | MS.gene049425:CDS |
| CTCTGTCTCCCAATGTCCAG+TGG | 0.551409 | 3.1:+74924740 | MS.gene049425:CDS |
| TAATCTCTGGCATGGATGGA+AGG | 0.552266 | 3.1:+74925710 | MS.gene049425:CDS |
| GCTTCACTCTGACAACGGAC+GGG | 0.555040 | 3.1:+74924075 | MS.gene049425:CDS |
| ACTTCTCCTTTGTGACGACC+TGG | 0.555547 | 3.1:-74923987 | None:intergenic |
| GATGAAGTAGTACAGGCCCT+TGG | 0.557475 | 3.1:-74924855 | None:intergenic |
| TCTTGCAACTGCTAGTGAGA+AGG | 0.557640 | 3.1:+74924103 | MS.gene049425:CDS |
| GAGAGTGAGGGTGTTTGGGG+AGG | 0.558785 | 3.1:+74924807 | MS.gene049425:CDS |
| ATTGTGAATACCCCAATAGT+GGG | 0.562593 | 3.1:+74923472 | MS.gene049425:CDS |
| CACTCAGCTGACGAGTCAGC+AGG | 0.562891 | 3.1:-74925745 | None:intergenic |
| CTTGAGAGTGAGGGTGTTTG+GGG | 0.564799 | 3.1:+74924804 | MS.gene049425:CDS |
| CGTGTAGGTTAGAAGAGGGG+TGG | 0.568066 | 3.1:+74924693 | MS.gene049425:intron |
| CACTGTCCTAATCTCTGGCA+TGG | 0.571130 | 3.1:+74925702 | MS.gene049425:CDS |
| CTACAGCACCAACAAGCGCT+AGG | 0.572951 | 3.1:-74923710 | None:intergenic |
| TCATCATTATCTTTCATGAG+AGG | 0.573870 | 3.1:+74924937 | MS.gene049425:CDS |
| TGCATGCTTCACTCTGACAA+CGG | 0.580675 | 3.1:+74924070 | MS.gene049425:CDS |
| TGCTGCCAACCACTGGACAT+TGG | 0.582381 | 3.1:-74924749 | None:intergenic |
| TTTGGGATGATCATCAGAGC+AGG | 0.585812 | 3.1:+74923766 | MS.gene049425:CDS |
| GAATCTTCAATACAATGGAT+GGG | 0.589619 | 3.1:+74924138 | MS.gene049425:CDS |
| ATATATTCAACTTGAGAGTG+AGG | 0.590254 | 3.1:+74924794 | MS.gene049425:CDS |
| AGATAATGATGAATTGGGGT+TGG | 0.592572 | 3.1:-74924926 | None:intergenic |
| AAGATGAGGCCCCACTATTG+GGG | 0.595901 | 3.1:-74923482 | None:intergenic |
| TCTCACTAGCAGTTGCAAGA+AGG | 0.597081 | 3.1:-74924100 | None:intergenic |
| GATTAGAATCTTCAATACAA+TGG | 0.601484 | 3.1:+74924133 | MS.gene049425:CDS |
| TATATTCAACTTGAGAGTGA+GGG | 0.607920 | 3.1:+74924795 | MS.gene049425:CDS |
| TCTATCGTGTAGGTTAGAAG+AGG | 0.613791 | 3.1:+74924688 | MS.gene049425:intron |
| TACGCCCAACTGCTGTCCAA+GGG | 0.621281 | 3.1:+74924839 | MS.gene049425:CDS |
| GTTTCATGGAATCAGGACTA+CGG | 0.621760 | 3.1:+74923561 | MS.gene049425:CDS |
| TGGCCGGGAAAGAGAAGATG+AGG | 0.624207 | 3.1:-74923496 | None:intergenic |
| TGAAAACACTAAATTCATTG+TGG | 0.629098 | 3.1:+74925663 | MS.gene049425:CDS |
| GCTTGTCCAGGTCGTCACAA+AGG | 0.632605 | 3.1:+74923981 | MS.gene049425:CDS |
| CCGGTATTTGGAGAAATCAA+GGG | 0.637476 | 3.1:-74924901 | None:intergenic |
| CAAGCGCTAGGATGTTGCTA+CGG | 0.644150 | 3.1:-74923698 | None:intergenic |
| TTGGCAGCATCAAGTGACAA+AGG | 0.665997 | 3.1:+74924763 | MS.gene049425:CDS |
| GATACTATGGCAAATCCTAG+GGG | 0.691243 | 3.1:+74923918 | MS.gene049425:CDS |
| TGAAAGATAATGATGAATTG+GGG | 0.693897 | 3.1:-74924930 | None:intergenic |
| TATCGTGTAGGTTAGAAGAG+GGG | 0.696069 | 3.1:+74924690 | MS.gene049425:intron |
| TTGTGAATACCCCAATAGTG+GGG | 0.696105 | 3.1:+74923473 | MS.gene049425:CDS |
| ATACTATGGCAAATCCTAGG+GGG | 0.718473 | 3.1:+74923919 | MS.gene049425:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | CAAATTATGATAATAATTTC+AGG | - | chr3.1:74924994-74925013 | None:intergenic | 15.0% |
| !! | CTGAAATTATTATCATAATT+TGG | + | chr3.1:74924992-74925011 | MS.gene049425:intron | 15.0% |
| !!! | TATTTTCATATCTATATATG+AGG | + | chr3.1:74924264-74924283 | MS.gene049425:intron | 15.0% |
| !! | ACATAAAAAAGATCAAAAGT+AGG | + | chr3.1:74925219-74925238 | MS.gene049425:intron | 20.0% |
| !! | ACCTAAAAACTATCTAAAAA+CGG | - | chr3.1:74925094-74925113 | None:intergenic | 20.0% |
| !! | AGATATGAAAATAAAAAACC+TGG | - | chr3.1:74924257-74924276 | None:intergenic | 20.0% |
| !! | ATGAAAGATAATGATGAATT+GGG | - | chr3.1:74924934-74924953 | None:intergenic | 20.0% |
| !! | CATAAAAAAGATCAAAAGTA+GGG | + | chr3.1:74925220-74925239 | MS.gene049425:intron | 20.0% |
| !! | GATATATGTTTATAACTTCA+TGG | + | chr3.1:74923872-74923891 | MS.gene049425:CDS | 20.0% |
| !! | GATATGAAAATAAAAAACCT+GGG | - | chr3.1:74924256-74924275 | None:intergenic | 20.0% |
| !!! | CAAAATATTTTAGTTCAGAA+TGG | + | chr3.1:74925617-74925636 | MS.gene049425:CDS | 20.0% |
| !!! | CATTCTGAACTAAAATATTT+TGG | - | chr3.1:74925619-74925638 | None:intergenic | 20.0% |
| !!! | TGTTTGTTTTATCATTCTTT+TGG | + | chr3.1:74925378-74925397 | MS.gene049425:intron | 20.0% |
| !!! | TTGTGAATTTTTTTATTGTG+TGG | + | chr3.1:74924415-74924434 | MS.gene049425:intron | 20.0% |
| ! | AAAATAAAAAACCTGGGAAA+TGG | - | chr3.1:74924250-74924269 | None:intergenic | 25.0% |
| ! | AAGTATTTGAATTGGTAAAC+TGG | - | chr3.1:74925040-74925059 | None:intergenic | 25.0% |
| ! | AGAGAACATCCATAAATATA+TGG | - | chr3.1:74925482-74925501 | None:intergenic | 25.0% |
| ! | ATCCCAAATCAAAACTTTAT+TGG | - | chr3.1:74923754-74923773 | None:intergenic | 25.0% |
| ! | CATGAAAGATAATGATGAAT+TGG | - | chr3.1:74924935-74924954 | None:intergenic | 25.0% |
| ! | CCATAACAAATGTATTTGAA+TGG | - | chr3.1:74923962-74923981 | None:intergenic | 25.0% |
| ! | GAGAACATCCATAAATATAT+GGG | - | chr3.1:74925481-74925500 | None:intergenic | 25.0% |
| ! | GATTAGAATCTTCAATACAA+TGG | + | chr3.1:74924133-74924152 | MS.gene049425:CDS | 25.0% |
| ! | TAGTAGAACCCATATATTTA+TGG | + | chr3.1:74925470-74925489 | MS.gene049425:intron | 25.0% |
| ! | TCCCAAATCAAAACTTTATT+GGG | - | chr3.1:74923753-74923772 | None:intergenic | 25.0% |
| ! | TCTTCATCAAATTGATACTA+TGG | + | chr3.1:74923905-74923924 | MS.gene049425:CDS | 25.0% |
| ! | TGAAAACACTAAATTCATTG+TGG | + | chr3.1:74925663-74925682 | MS.gene049425:CDS | 25.0% |
| ! | TGAAAGATAATGATGAATTG+GGG | - | chr3.1:74924933-74924952 | None:intergenic | 25.0% |
| ! | TGGAAAGTTCAACATATTAA+TGG | - | chr3.1:74924216-74924235 | None:intergenic | 25.0% |
| ! | TTTAAGAATGATCAAGAATC+AGG | - | chr3.1:74924447-74924466 | None:intergenic | 25.0% |
| ! | TTTCATATCTATATATGAGG+TGG | + | chr3.1:74924267-74924286 | MS.gene049425:intron | 25.0% |
| !! | AATCAATGATTTTGCACATT+AGG | + | chr3.1:74925353-74925372 | MS.gene049425:intron | 25.0% |
| !! | ACAATGAATTTAGTGTTTTC+AGG | - | chr3.1:74925664-74925683 | None:intergenic | 25.0% |
| !! | ACAATTTTCTTTGCATCTTT+TGG | + | chr3.1:74924482-74924501 | MS.gene049425:intron | 25.0% |
| !! | CCATTCAAATACATTTGTTA+TGG | + | chr3.1:74923959-74923978 | MS.gene049425:CDS | 25.0% |
| !! | GCTAAAACATTGTTATTGTA+AGG | - | chr3.1:74924514-74924533 | None:intergenic | 25.0% |
| !! | GGAAAATTGCATGATATTTT+TGG | + | chr3.1:74925537-74925556 | MS.gene049425:intron | 25.0% |
| !! | TGAAAATGTTTTACTTGACT+TGG | - | chr3.1:74924392-74924411 | None:intergenic | 25.0% |
| !! | TGCTCTATTAGATTTACTTT+TGG | + | chr3.1:74925277-74925296 | MS.gene049425:intron | 25.0% |
| !!! | ACCCAATAAAGTTTTGATTT+GGG | + | chr3.1:74923749-74923768 | MS.gene049425:CDS | 25.0% |
| !!! | TTGTTAGCTTACTTTTAAGA+TGG | + | chr3.1:74925516-74925535 | MS.gene049425:intron | 25.0% |
| !!! | TTTTTAGGTCTTCATCATTT+AGG | + | chr3.1:74925105-74925124 | MS.gene049425:intron | 25.0% |
| AAGATCAAACTGAATCCTAT+TGG | - | chr3.1:74924630-74924649 | None:intergenic | 30.0% | |
| ACTAAATTCATTGTGGCATT+TGG | + | chr3.1:74925670-74925689 | MS.gene049425:CDS | 30.0% | |
| AGAATCTTCAATACAATGGA+TGG | + | chr3.1:74924137-74924156 | MS.gene049425:CDS | 30.0% | |
| ATATATTCAACTTGAGAGTG+AGG | + | chr3.1:74924794-74924813 | MS.gene049425:CDS | 30.0% | |
| ATTGTTTCCAGAGAGAAAAT+AGG | - | chr3.1:74925584-74925603 | None:intergenic | 30.0% | |
| CAAATCAAAACTTTATTGGG+TGG | - | chr3.1:74923750-74923769 | None:intergenic | 30.0% | |
| GAATCTTCAATACAATGGAT+GGG | + | chr3.1:74924138-74924157 | MS.gene049425:CDS | 30.0% | |
| GATGTTATTACATGCTTGAA+AGG | - | chr3.1:74925447-74925466 | None:intergenic | 30.0% | |
| GATTATTGAACACGAAAAGA+GGG | - | chr3.1:74924662-74924681 | None:intergenic | 30.0% | |
| GGGAAATGGAAAATATGAAA+TGG | - | chr3.1:74924236-74924255 | None:intergenic | 30.0% | |
| TATATTCAACTTGAGAGTGA+GGG | + | chr3.1:74924795-74924814 | MS.gene049425:CDS | 30.0% | |
| TCATCATTATCTTTCATGAG+AGG | + | chr3.1:74924937-74924956 | MS.gene049425:CDS | 30.0% | |
| TCATCATTTAGGAAACTTGA+TGG | + | chr3.1:74925116-74925135 | MS.gene049425:intron | 30.0% | |
| TTCATAAAAACAGGAGACTT+CGG | - | chr3.1:74925174-74925193 | None:intergenic | 30.0% | |
| ! | ATTTTCTTTGCATCTTTTGG+AGG | + | chr3.1:74924485-74924504 | MS.gene049425:intron | 30.0% |
| ! | TTTCATATTTTCCATTTCCC+AGG | + | chr3.1:74924236-74924255 | MS.gene049425:intron | 30.0% |
| !! | AATCGATTTTTCTATCGTGT+AGG | + | chr3.1:74924678-74924697 | MS.gene049425:intron | 30.0% |
| !! | ATTTACTTTTGGATTTGTGC+AGG | + | chr3.1:74925288-74925307 | MS.gene049425:intron | 30.0% |
| !! | TTTACTTTTGGATTTGTGCA+GGG | + | chr3.1:74925289-74925308 | MS.gene049425:intron | 30.0% |
| !!! | CACCCAATAAAGTTTTGATT+TGG | + | chr3.1:74923748-74923767 | MS.gene049425:CDS | 30.0% |
| !!! | GCCGTTTTTAGATAGTTTTT+AGG | + | chr3.1:74925090-74925109 | MS.gene049425:intron | 30.0% |
| !!! | TTTTGGTTTATGAGTTATCC+AGG | + | chr3.1:74925395-74925414 | MS.gene049425:intron | 30.0% |
| AACCTTTCAAAGAGACTTTC+AGG | + | chr3.1:74923631-74923650 | MS.gene049425:CDS | 35.0% | |
| AACTTTATTGGGTGGATAGT+TGG | - | chr3.1:74923742-74923761 | None:intergenic | 35.0% | |
| AAGTGGAACTTCTTTCCAAT+AGG | + | chr3.1:74924612-74924631 | MS.gene049425:intron | 35.0% | |
| AATTGTGAATACCCCAATAG+TGG | + | chr3.1:74923471-74923490 | MS.gene049425:CDS | 35.0% | |
| AGATAATGATGAATTGGGGT+TGG | - | chr3.1:74924929-74924948 | None:intergenic | 35.0% | |
| AGCTGGCTAAGTATTTGAAT+TGG | - | chr3.1:74925048-74925067 | None:intergenic | 35.0% | |
| ATCAAAGATGTAATGCTACC+TGG | - | chr3.1:74925416-74925435 | None:intergenic | 35.0% | |
| ATTGTGAATACCCCAATAGT+GGG | + | chr3.1:74923472-74923491 | MS.gene049425:CDS | 35.0% | |
| CGATTATTGAACACGAAAAG+AGG | - | chr3.1:74924663-74924682 | None:intergenic | 35.0% | |
| GAATTCTGATGAAGTAGTAC+AGG | - | chr3.1:74924865-74924884 | None:intergenic | 35.0% | |
| GGTAAACTGGAAAAGATGAT+TGG | - | chr3.1:74925027-74925046 | None:intergenic | 35.0% | |
| TGATACTATGGCAAATCCTA+GGG | + | chr3.1:74923917-74923936 | MS.gene049425:CDS | 35.0% | |
| TTCAGGCGTGATTTAAAAAG+TGG | + | chr3.1:74923648-74923667 | MS.gene049425:CDS | 35.0% | |
| TTGATACTATGGCAAATCCT+AGG | + | chr3.1:74923916-74923935 | MS.gene049425:CDS | 35.0% | |
| ! | ACATTTAGATCTGAAGTTCG+TGG | + | chr3.1:74923804-74923823 | MS.gene049425:CDS | 35.0% |
| ! | GTTCTTACCTATTTTCTCTC+TGG | + | chr3.1:74925574-74925593 | MS.gene049425:intron | 35.0% |
| ! | TCATGTAAGATGATTTGTGC+AGG | - | chr3.1:74925333-74925352 | None:intergenic | 35.0% |
| ! | TTTTACGCCTCAACATTCTT+GGG | + | chr3.1:74924570-74924589 | MS.gene049425:intron | 35.0% |
| !! | ATTTAGTGTTTTCAGGCAAG+TGG | - | chr3.1:74925657-74925676 | None:intergenic | 35.0% |
| !! | CAGAGCTATACTGTTGATTT+CGG | - | chr3.1:74924725-74924744 | None:intergenic | 35.0% |
| !! | CTGATTTGTTCTCAGTTTCA+TGG | + | chr3.1:74923547-74923566 | MS.gene049425:CDS | 35.0% |
| ACCGGTATTTGGAGAAATCA+AGG | - | chr3.1:74924905-74924924 | None:intergenic | 40.0% | |
| AGCATGCAATTTGGGAATCA+TGG | - | chr3.1:74924058-74924077 | None:intergenic | 40.0% | |
| AGGCGTGATTTAAAAAGTGG+CGG | + | chr3.1:74923651-74923670 | MS.gene049425:CDS | 40.0% | |
| ATACTATGGCAAATCCTAGG+GGG | + | chr3.1:74923919-74923938 | MS.gene049425:CDS | 40.0% | |
| CAGAGTGAAGCATGCAATTT+GGG | - | chr3.1:74924066-74924085 | None:intergenic | 40.0% | |
| CCAGCACAGTTCATAAAAAC+AGG | - | chr3.1:74925183-74925202 | None:intergenic | 40.0% | |
| CCCTTGATTTCTCCAAATAC+CGG | + | chr3.1:74924901-74924920 | MS.gene049425:CDS | 40.0% | |
| CCGGTATTTGGAGAAATCAA+GGG | - | chr3.1:74924904-74924923 | None:intergenic | 40.0% | |
| CTATCGTGTAGGTTAGAAGA+GGG | + | chr3.1:74924689-74924708 | MS.gene049425:intron | 40.0% | |
| GATACTATGGCAAATCCTAG+GGG | + | chr3.1:74923918-74923937 | MS.gene049425:CDS | 40.0% | |
| GCATGCAATTTGGGAATCAT+GGG | - | chr3.1:74924057-74924076 | None:intergenic | 40.0% | |
| GTTCTCAGTTTCATGGAATC+AGG | + | chr3.1:74923554-74923573 | MS.gene049425:CDS | 40.0% | |
| GTTTCATGGAATCAGGACTA+CGG | + | chr3.1:74923561-74923580 | MS.gene049425:CDS | 40.0% | |
| TATCGTGTAGGTTAGAAGAG+GGG | + | chr3.1:74924690-74924709 | MS.gene049425:intron | 40.0% | |
| TCAAATACTTAGCCAGCTCA+GGG | + | chr3.1:74925050-74925069 | MS.gene049425:intron | 40.0% | |
| TCAGAGTGAAGCATGCAATT+TGG | - | chr3.1:74924067-74924086 | None:intergenic | 40.0% | |
| TCTATCGTGTAGGTTAGAAG+AGG | + | chr3.1:74924688-74924707 | MS.gene049425:intron | 40.0% | |
| TTCAAATACTTAGCCAGCTC+AGG | + | chr3.1:74925049-74925068 | MS.gene049425:intron | 40.0% | |
| TTCCACTTCCAAAACTATCG+TGG | - | chr3.1:74924600-74924619 | None:intergenic | 40.0% | |
| TTGTGAATACCCCAATAGTG+GGG | + | chr3.1:74923473-74923492 | MS.gene049425:CDS | 40.0% | |
| ! | CTTTTACGCCTCAACATTCT+TGG | + | chr3.1:74924569-74924588 | MS.gene049425:intron | 40.0% |
| ! | TTCTCTCTGGAAACAATGCA+GGG | + | chr3.1:74925587-74925606 | MS.gene049425:intron | 40.0% |
| ! | TTTCTCTCTGGAAACAATGC+AGG | + | chr3.1:74925586-74925605 | MS.gene049425:intron | 40.0% |
| !! | ACATTTGTTATGGCTTGTCC+AGG | + | chr3.1:74923969-74923988 | MS.gene049425:CDS | 40.0% |
| !! | GAAGTTCGAGTTGAACACTT+TGG | + | chr3.1:74924005-74924024 | MS.gene049425:CDS | 40.0% |
| !!! | CCTGTTTTTATGAACTGTGC+TGG | + | chr3.1:74925180-74925199 | MS.gene049425:intron | 40.0% |
| CAGAACACTGTCCTAATCTC+TGG | + | chr3.1:74925697-74925716 | MS.gene049425:CDS | 45.0% | |
| CATAATATAGCTCCCTGAGC+TGG | - | chr3.1:74925065-74925084 | None:intergenic | 45.0% | |
| CGCCTGAAAGTCTCTTTGAA+AGG | - | chr3.1:74923636-74923655 | None:intergenic | 45.0% | |
| CTGTCATTGATGTCTGCATC+TGG | - | chr3.1:74923519-74923538 | None:intergenic | 45.0% | |
| CTTGCAACTGCTAGTGAGAA+GGG | + | chr3.1:74924104-74924123 | MS.gene049425:CDS | 45.0% | |
| GGGTCTCGTTTACAAGAAGT+AGG | + | chr3.1:74924158-74924177 | MS.gene049425:intron | 45.0% | |
| TAATCTCTGGCATGGATGGA+AGG | + | chr3.1:74925710-74925729 | MS.gene049425:CDS | 45.0% | |
| TCAGGTGCTCTGCATTACAA+AGG | - | chr3.1:74924976-74924995 | None:intergenic | 45.0% | |
| TCTCACTAGCAGTTGCAAGA+AGG | - | chr3.1:74924103-74924122 | None:intergenic | 45.0% | |
| TCTTGCAACTGCTAGTGAGA+AGG | + | chr3.1:74924103-74924122 | MS.gene049425:CDS | 45.0% | |
| TGCATGCTTCACTCTGACAA+CGG | + | chr3.1:74924070-74924089 | MS.gene049425:CDS | 45.0% | |
| TGGACAACCCAAGAATGTTG+AGG | - | chr3.1:74924580-74924599 | None:intergenic | 45.0% | |
| TTAGCTGCTGGAACAAGTCA+TGG | + | chr3.1:74923588-74923607 | MS.gene049425:CDS | 45.0% | |
| TTCCATCCATGCCAGAGATT+AGG | - | chr3.1:74925711-74925730 | None:intergenic | 45.0% | |
| TTGGCAGCATCAAGTGACAA+AGG | + | chr3.1:74924763-74924782 | MS.gene049425:CDS | 45.0% | |
| ! | TCTCTCTGGAAACAATGCAG+GGG | + | chr3.1:74925588-74925607 | MS.gene049425:intron | 45.0% |
| ! | TGGGTTGTCCACGATAGTTT+TGG | + | chr3.1:74924589-74924608 | MS.gene049425:intron | 45.0% |
| ! | TTTGGGATGATCATCAGAGC+AGG | + | chr3.1:74923766-74923785 | MS.gene049425:CDS | 45.0% |
| !! | AACTTGAGAGTGAGGGTGTT+TGG | + | chr3.1:74924802-74924821 | MS.gene049425:CDS | 45.0% |
| !! | ACTTGAGAGTGAGGGTGTTT+GGG | + | chr3.1:74924803-74924822 | MS.gene049425:CDS | 45.0% |
| !!! | GTCCACGATAGTTTTGGAAG+TGG | + | chr3.1:74924595-74924614 | MS.gene049425:intron | 45.0% |
| AAGATGAGGCCCCACTATTG+GGG | - | chr3.1:74923485-74923504 | None:intergenic | 50.0% | |
| ACTTCTCCTTTGTGACGACC+TGG | - | chr3.1:74923990-74924009 | None:intergenic | 50.0% | |
| AGAAGATGAGGCCCCACTAT+TGG | - | chr3.1:74923487-74923506 | None:intergenic | 50.0% | |
| AGCAACATCCTAGCGCTTGT+TGG | + | chr3.1:74923702-74923721 | MS.gene049425:CDS | 50.0% | |
| AGGTTAGAAGAGGGGTGGAT+AGG | + | chr3.1:74924698-74924717 | MS.gene049425:intron | 50.0% | |
| ATTGATGTCTGCATCTGGCC+GGG | - | chr3.1:74923514-74923533 | None:intergenic | 50.0% | |
| CAAGCGCTAGGATGTTGCTA+CGG | - | chr3.1:74923701-74923720 | None:intergenic | 50.0% | |
| CACTGTCCTAATCTCTGGCA+TGG | + | chr3.1:74925702-74925721 | MS.gene049425:CDS | 50.0% | |
| CATTGATGTCTGCATCTGGC+CGG | - | chr3.1:74923515-74923534 | None:intergenic | 50.0% | |
| GAAGATGAGGCCCCACTATT+GGG | - | chr3.1:74923486-74923505 | None:intergenic | 50.0% | |
| GATCATCAGAGCAGGTGCAT+TGG | + | chr3.1:74923774-74923793 | MS.gene049425:CDS | 50.0% | |
| GATGAAGTAGTACAGGCCCT+TGG | - | chr3.1:74924858-74924877 | None:intergenic | 50.0% | |
| GGTTAGAAGAGGGGTGGATA+GGG | + | chr3.1:74924699-74924718 | MS.gene049425:intron | 50.0% | |
| GTCCTAATCTCTGGCATGGA+TGG | + | chr3.1:74925706-74925725 | MS.gene049425:CDS | 50.0% | |
| TGCTTCACTCTGACAACGGA+CGG | + | chr3.1:74924074-74924093 | MS.gene049425:CDS | 50.0% | |
| ! | TGATGAATTGGGGTTGGCAC+CGG | - | chr3.1:74924923-74924942 | None:intergenic | 50.0% |
| !! | CTTGAGAGTGAGGGTGTTTG+GGG | + | chr3.1:74924804-74924823 | MS.gene049425:CDS | 50.0% |
| ATACGCCCAACTGCTGTCCA+AGG | + | chr3.1:74924838-74924857 | MS.gene049425:CDS | 55.0% | |
| CACTTGATGCTGCCAACCAC+TGG | - | chr3.1:74924759-74924778 | None:intergenic | 55.0% | |
| CGTGTAGGTTAGAAGAGGGG+TGG | + | chr3.1:74924693-74924712 | MS.gene049425:intron | 55.0% | |
| CTACAGCACCAACAAGCGCT+AGG | - | chr3.1:74923713-74923732 | None:intergenic | 55.0% | |
| CTCTGTCTCCCAATGTCCAG+TGG | + | chr3.1:74924740-74924759 | MS.gene049425:CDS | 55.0% | |
| GAAAGACAGCACAACCCCCT+AGG | - | chr3.1:74923936-74923955 | None:intergenic | 55.0% | |
| GACTACGGTTGCTTAGCTGC+TGG | + | chr3.1:74923576-74923595 | MS.gene049425:CDS | 55.0% | |
| GCTGCCAACCACTGGACATT+GGG | - | chr3.1:74924751-74924770 | None:intergenic | 55.0% | |
| GCTTCACTCTGACAACGGAC+GGG | + | chr3.1:74924075-74924094 | MS.gene049425:CDS | 55.0% | |
| GCTTGTCCAGGTCGTCACAA+AGG | + | chr3.1:74923981-74924000 | MS.gene049425:CDS | 55.0% | |
| GGGCCTCATCTTCTCTTTCC+CGG | + | chr3.1:74923493-74923512 | MS.gene049425:CDS | 55.0% | |
| GTCTCCCAATGTCCAGTGGT+TGG | + | chr3.1:74924744-74924763 | MS.gene049425:CDS | 55.0% | |
| TACGCCCAACTGCTGTCCAA+GGG | + | chr3.1:74924839-74924858 | MS.gene049425:CDS | 55.0% | |
| TGCTGCCAACCACTGGACAT+TGG | - | chr3.1:74924752-74924771 | None:intergenic | 55.0% | |
| TGGCCGGGAAAGAGAAGATG+AGG | - | chr3.1:74923499-74923518 | None:intergenic | 55.0% | |
| !! | TTGGGGTTGGCACCGGTATT+TGG | - | chr3.1:74924916-74924935 | None:intergenic | 55.0% |
| ACAGGCCCTTGGACAGCAGT+TGG | - | chr3.1:74924847-74924866 | None:intergenic | 60.0% | |
| CACTCAGCTGACGAGTCAGC+AGG | - | chr3.1:74925748-74925767 | None:intergenic | 60.0% | |
| CAGGCCCTTGGACAGCAGTT+GGG | - | chr3.1:74924846-74924865 | None:intergenic | 60.0% | |
| !! | GAGAGTGAGGGTGTTTGGGG+AGG | + | chr3.1:74924807-74924826 | MS.gene049425:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.1 | gene | 74923462 | 74925774 | 74923462 | ID=MS.gene049425 |
| chr3.1 | mRNA | 74923462 | 74925774 | 74923462 | ID=MS.gene049425.t1;Parent=MS.gene049425 |
| chr3.1 | exon | 74923462 | 74924175 | 74923462 | ID=MS.gene049425.t1.exon1;Parent=MS.gene049425.t1 |
| chr3.1 | CDS | 74923462 | 74924175 | 74923462 | ID=cds.MS.gene049425.t1;Parent=MS.gene049425.t1 |
| chr3.1 | exon | 74924700 | 74924958 | 74924700 | ID=MS.gene049425.t1.exon2;Parent=MS.gene049425.t1 |
| chr3.1 | CDS | 74924700 | 74924958 | 74924700 | ID=cds.MS.gene049425.t1;Parent=MS.gene049425.t1 |
| chr3.1 | exon | 74925608 | 74925774 | 74925608 | ID=MS.gene049425.t1.exon3;Parent=MS.gene049425.t1 |
| chr3.1 | CDS | 74925608 | 74925774 | 74925608 | ID=cds.MS.gene049425.t1;Parent=MS.gene049425.t1 |
| Gene Sequence |
| Protein sequence |
