Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene005626.t1 | XP_013469209.1 | 98.1 | 590 | 11 | 0 | 16 | 605 | 32 | 621 | 0.00E+00 | 1110.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene005626.t1 | Q9SA69 | 68.5 | 619 | 170 | 7 | 6 | 605 | 22 | 634 | 1.0e-225 | 784.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene005626.t1 | A0A072VN31 | 98.1 | 590 | 11 | 0 | 16 | 605 | 32 | 621 | 0.0e+00 | 1110.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene71625 | MS.gene005626 | PPI |
| MS.gene76815 | MS.gene005626 | PPI |
| MS.gene005626 | MS.gene91300 | PPI |
| MS.gene060275 | MS.gene005626 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene005626.t1 | MTR_1g088885 | 97.157 | 598 | 17 | 0 | 8 | 605 | 24 | 621 | 0.0 | 1188 |
| MS.gene005626.t1 | MTR_7g108290 | 77.547 | 579 | 120 | 6 | 8 | 579 | 24 | 599 | 0.0 | 909 |
| MS.gene005626.t1 | MTR_4g022330 | 47.795 | 567 | 270 | 9 | 19 | 575 | 33 | 583 | 8.65e-178 | 517 |
| MS.gene005626.t1 | MTR_7g073980 | 44.741 | 599 | 298 | 8 | 15 | 601 | 28 | 605 | 7.55e-169 | 495 |
| MS.gene005626.t1 | MTR_5g016060 | 41.600 | 625 | 294 | 16 | 19 | 605 | 39 | 630 | 1.16e-152 | 453 |
| MS.gene005626.t1 | MTR_4g095430 | 38.662 | 613 | 321 | 14 | 19 | 605 | 12 | 595 | 2.91e-134 | 405 |
| MS.gene005626.t1 | MTR_3g062540 | 36.469 | 606 | 306 | 14 | 19 | 605 | 23 | 568 | 2.39e-121 | 371 |
| MS.gene005626.t1 | MTR_5g016060 | 39.344 | 549 | 262 | 16 | 95 | 605 | 1 | 516 | 4.40e-117 | 358 |
| MS.gene005626.t1 | MTR_3g062540 | 36.239 | 585 | 294 | 14 | 40 | 605 | 2 | 526 | 2.24e-114 | 351 |
| MS.gene005626.t1 | MTR_4g093850 | 33.385 | 647 | 353 | 13 | 18 | 605 | 42 | 669 | 7.29e-113 | 352 |
| MS.gene005626.t1 | MTR_5g075640 | 34.461 | 621 | 308 | 14 | 19 | 605 | 24 | 579 | 1.36e-110 | 343 |
| MS.gene005626.t1 | MTR_2g009340 | 33.121 | 628 | 344 | 12 | 18 | 584 | 42 | 654 | 1.42e-108 | 341 |
| MS.gene005626.t1 | MTR_8g078900 | 32.855 | 627 | 329 | 9 | 1 | 556 | 1 | 606 | 5.05e-108 | 339 |
| MS.gene005626.t1 | MTR_8g078900 | 33.613 | 595 | 303 | 9 | 33 | 556 | 3 | 576 | 5.99e-106 | 333 |
| MS.gene005626.t1 | MTR_5g075640 | 34.333 | 600 | 295 | 14 | 40 | 605 | 2 | 536 | 6.43e-104 | 325 |
| MS.gene005626.t1 | MTR_2g084595 | 34.118 | 595 | 329 | 12 | 18 | 572 | 21 | 592 | 8.98e-103 | 325 |
| MS.gene005626.t1 | MTR_8g090220 | 33.611 | 601 | 295 | 14 | 3 | 556 | 39 | 582 | 1.91e-102 | 324 |
| MS.gene005626.t1 | MTR_8g078900 | 34.799 | 546 | 284 | 8 | 62 | 556 | 42 | 566 | 1.01e-101 | 322 |
| MS.gene005626.t1 | MTR_1g094850 | 35.140 | 572 | 325 | 12 | 22 | 571 | 28 | 575 | 3.67e-101 | 320 |
| MS.gene005626.t1 | MTR_1g064360 | 35.055 | 542 | 302 | 10 | 18 | 537 | 24 | 537 | 9.11e-101 | 317 |
| MS.gene005626.t1 | MTR_8g090220 | 35.742 | 512 | 256 | 11 | 3 | 479 | 39 | 512 | 2.57e-99 | 312 |
| MS.gene005626.t1 | MTR_2g018750 | 34.828 | 580 | 324 | 13 | 18 | 571 | 24 | 575 | 5.73e-99 | 314 |
| MS.gene005626.t1 | MTR_1g106430 | 34.909 | 550 | 317 | 12 | 3 | 526 | 15 | 549 | 1.36e-91 | 295 |
| MS.gene005626.t1 | MTR_5g015790 | 36.820 | 478 | 266 | 9 | 18 | 478 | 25 | 483 | 5.11e-91 | 294 |
| MS.gene005626.t1 | MTR_5g032780 | 37.476 | 515 | 264 | 13 | 18 | 487 | 24 | 525 | 5.89e-90 | 291 |
| MS.gene005626.t1 | MTR_1g014070 | 35.270 | 482 | 288 | 8 | 9 | 477 | 17 | 487 | 1.63e-88 | 287 |
| MS.gene005626.t1 | MTR_2g048390 | 36.199 | 442 | 239 | 8 | 18 | 428 | 24 | 453 | 6.90e-83 | 267 |
| MS.gene005626.t1 | MTR_4g093850 | 34.177 | 474 | 245 | 9 | 18 | 438 | 42 | 501 | 2.08e-81 | 266 |
| MS.gene005626.t1 | MTR_8g069330 | 36.025 | 483 | 270 | 10 | 23 | 487 | 29 | 490 | 2.79e-80 | 265 |
| MS.gene005626.t1 | MTR_4g134210 | 31.588 | 554 | 310 | 13 | 18 | 547 | 24 | 532 | 1.21e-76 | 255 |
| MS.gene005626.t1 | MTR_8g078900 | 32.533 | 458 | 251 | 7 | 18 | 428 | 18 | 464 | 5.88e-76 | 249 |
| MS.gene005626.t1 | MTR_8g078900 | 34.518 | 394 | 220 | 6 | 62 | 428 | 42 | 424 | 3.39e-70 | 233 |
| MS.gene005626.t1 | MTR_2g084595 | 33.409 | 443 | 246 | 8 | 18 | 428 | 21 | 446 | 2.92e-68 | 229 |
| MS.gene005626.t1 | MTR_1g082690 | 28.958 | 480 | 284 | 10 | 21 | 489 | 59 | 492 | 1.32e-66 | 227 |
| MS.gene005626.t1 | MTR_2g027410 | 30.290 | 482 | 273 | 10 | 17 | 476 | 23 | 463 | 7.81e-65 | 223 |
| MS.gene005626.t1 | MTR_4g011530 | 33.747 | 403 | 219 | 12 | 185 | 572 | 33 | 402 | 3.69e-62 | 213 |
| MS.gene005626.t1 | MTR_2g102730 | 33.867 | 375 | 197 | 9 | 194 | 556 | 24 | 359 | 9.68e-58 | 200 |
| MS.gene005626.t1 | MTR_2g027410 | 30.093 | 432 | 239 | 10 | 67 | 476 | 1 | 391 | 2.05e-54 | 193 |
| MS.gene005626.t1 | MTR_4g045767 | 26.460 | 582 | 353 | 15 | 23 | 574 | 7 | 543 | 3.24e-47 | 174 |
| MS.gene005626.t1 | MTR_4g074190 | 27.129 | 505 | 281 | 12 | 21 | 479 | 4 | 467 | 2.68e-42 | 160 |
| MS.gene005626.t1 | MTR_1g035720 | 25.210 | 595 | 316 | 19 | 23 | 561 | 6 | 527 | 1.00e-41 | 158 |
| MS.gene005626.t1 | MTR_1g105870 | 40.625 | 192 | 101 | 3 | 27 | 213 | 38 | 221 | 5.56e-41 | 150 |
| MS.gene005626.t1 | MTR_4g074190 | 27.093 | 454 | 248 | 10 | 68 | 479 | 9 | 421 | 9.10e-40 | 152 |
| MS.gene005626.t1 | MTR_4g074190 | 25.934 | 455 | 250 | 12 | 21 | 429 | 4 | 417 | 1.05e-31 | 128 |
| MS.gene005626.t1 | MTR_2g010890 | 25.986 | 431 | 264 | 8 | 86 | 499 | 1 | 393 | 5.50e-30 | 123 |
| MS.gene005626.t1 | MTR_2g048375 | 46.491 | 114 | 51 | 3 | 444 | 556 | 1 | 105 | 4.75e-22 | 94.4 |
| MS.gene005626.t1 | MTR_4g126990 | 89.189 | 37 | 4 | 0 | 1 | 37 | 1 | 37 | 1.51e-16 | 74.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene005626.t1 | AT1G03010 | 69.608 | 612 | 161 | 7 | 13 | 605 | 28 | 633 | 0.0 | 828 |
| MS.gene005626.t1 | AT1G03010 | 69.558 | 611 | 161 | 7 | 14 | 605 | 3 | 607 | 0.0 | 827 |
| MS.gene005626.t1 | AT1G03010 | 68.982 | 619 | 167 | 7 | 6 | 605 | 22 | 634 | 0.0 | 827 |
| MS.gene005626.t1 | AT2G47860 | 59.098 | 621 | 221 | 9 | 8 | 605 | 25 | 635 | 0.0 | 709 |
| MS.gene005626.t1 | AT2G47860 | 56.988 | 644 | 221 | 10 | 8 | 605 | 25 | 658 | 0.0 | 696 |
| MS.gene005626.t1 | AT2G47860 | 58.779 | 524 | 186 | 8 | 105 | 605 | 1 | 517 | 0.0 | 581 |
| MS.gene005626.t1 | AT2G47860 | 58.779 | 524 | 186 | 8 | 105 | 605 | 1 | 517 | 0.0 | 581 |
| MS.gene005626.t1 | AT2G47860 | 59.535 | 430 | 155 | 5 | 8 | 428 | 25 | 444 | 2.77e-175 | 504 |
| MS.gene005626.t1 | AT5G48800 | 45.648 | 563 | 278 | 7 | 19 | 575 | 40 | 580 | 1.05e-170 | 499 |
| MS.gene005626.t1 | AT2G47860 | 56.512 | 453 | 155 | 6 | 8 | 428 | 25 | 467 | 7.06e-170 | 491 |
| MS.gene005626.t1 | AT3G08570 | 43.299 | 582 | 296 | 10 | 7 | 575 | 22 | 582 | 4.83e-152 | 451 |
| MS.gene005626.t1 | AT3G08660 | 42.553 | 564 | 276 | 13 | 15 | 573 | 29 | 549 | 2.70e-142 | 425 |
| MS.gene005626.t1 | AT5G67385 | 39.542 | 612 | 314 | 12 | 19 | 605 | 24 | 604 | 7.69e-140 | 420 |
| MS.gene005626.t1 | AT3G08660 | 42.105 | 532 | 260 | 13 | 47 | 573 | 1 | 489 | 1.20e-129 | 390 |
| MS.gene005626.t1 | AT5G67385 | 38.983 | 590 | 304 | 12 | 41 | 605 | 1 | 559 | 8.83e-129 | 390 |
| MS.gene005626.t1 | AT5G67385 | 38.983 | 590 | 304 | 12 | 41 | 605 | 1 | 559 | 8.83e-129 | 390 |
| MS.gene005626.t1 | AT5G67385 | 38.983 | 590 | 304 | 12 | 41 | 605 | 1 | 559 | 8.83e-129 | 390 |
| MS.gene005626.t1 | AT5G67385 | 38.983 | 590 | 304 | 12 | 41 | 605 | 1 | 559 | 8.83e-129 | 390 |
| MS.gene005626.t1 | AT1G30440 | 36.187 | 619 | 314 | 12 | 18 | 592 | 24 | 605 | 7.99e-118 | 365 |
| MS.gene005626.t1 | AT2G30520 | 34.231 | 631 | 338 | 15 | 1 | 605 | 14 | 593 | 4.68e-111 | 345 |
| MS.gene005626.t1 | AT5G03250 | 36.082 | 582 | 306 | 15 | 22 | 572 | 28 | 574 | 2.53e-109 | 340 |
| MS.gene005626.t1 | AT5G13600 | 37.456 | 566 | 278 | 16 | 23 | 556 | 29 | 550 | 1.89e-103 | 325 |
| MS.gene005626.t1 | AT2G30520 | 34.459 | 592 | 314 | 14 | 40 | 605 | 2 | 545 | 6.69e-103 | 322 |
| MS.gene005626.t1 | AT2G30520 | 34.459 | 592 | 314 | 14 | 40 | 605 | 2 | 545 | 6.69e-103 | 322 |
| MS.gene005626.t1 | AT3G49970 | 33.946 | 598 | 281 | 15 | 33 | 605 | 7 | 515 | 1.11e-99 | 313 |
| MS.gene005626.t1 | AT3G49970 | 33.946 | 598 | 281 | 15 | 33 | 605 | 7 | 515 | 1.11e-99 | 313 |
| MS.gene005626.t1 | AT2G14820 | 34.070 | 543 | 320 | 11 | 18 | 539 | 25 | 550 | 2.67e-97 | 310 |
| MS.gene005626.t1 | AT2G14820 | 34.070 | 543 | 320 | 11 | 18 | 539 | 25 | 550 | 2.67e-97 | 310 |
| MS.gene005626.t1 | AT5G66560 | 32.909 | 629 | 299 | 12 | 22 | 556 | 21 | 620 | 1.15e-95 | 307 |
| MS.gene005626.t1 | AT3G44820 | 32.149 | 591 | 321 | 11 | 18 | 556 | 21 | 583 | 3.55e-94 | 303 |
| MS.gene005626.t1 | AT3G50840 | 33.040 | 569 | 310 | 9 | 8 | 556 | 4 | 521 | 8.71e-94 | 299 |
| MS.gene005626.t1 | AT3G08660 | 40.000 | 425 | 219 | 10 | 15 | 434 | 29 | 422 | 1.94e-93 | 294 |
| MS.gene005626.t1 | AT5G66560 | 32.848 | 618 | 292 | 12 | 33 | 556 | 3 | 591 | 2.56e-93 | 300 |
| MS.gene005626.t1 | AT5G66560 | 34.679 | 545 | 277 | 9 | 62 | 556 | 66 | 581 | 7.33e-92 | 296 |
| MS.gene005626.t1 | AT5G10250 | 32.522 | 575 | 292 | 15 | 18 | 553 | 48 | 565 | 2.51e-91 | 295 |
| MS.gene005626.t1 | AT1G67900 | 36.149 | 509 | 276 | 8 | 18 | 489 | 24 | 520 | 8.56e-89 | 288 |
| MS.gene005626.t1 | AT1G67900 | 36.149 | 509 | 276 | 8 | 18 | 489 | 24 | 520 | 8.56e-89 | 288 |
| MS.gene005626.t1 | AT1G67900 | 36.149 | 509 | 276 | 8 | 18 | 489 | 24 | 520 | 8.56e-89 | 288 |
| MS.gene005626.t1 | AT1G67900 | 36.149 | 509 | 276 | 8 | 18 | 489 | 24 | 520 | 8.56e-89 | 288 |
| MS.gene005626.t1 | AT1G67900 | 36.149 | 509 | 276 | 8 | 18 | 489 | 24 | 520 | 8.56e-89 | 288 |
| MS.gene005626.t1 | AT1G67900 | 36.149 | 509 | 276 | 8 | 18 | 489 | 24 | 520 | 8.56e-89 | 288 |
| MS.gene005626.t1 | AT5G10250 | 32.451 | 567 | 288 | 15 | 18 | 553 | 48 | 550 | 1.54e-88 | 287 |
| MS.gene005626.t1 | AT4G31820 | 35.611 | 483 | 267 | 10 | 9 | 478 | 17 | 468 | 4.78e-87 | 282 |
| MS.gene005626.t1 | AT3G50840 | 32.836 | 536 | 289 | 9 | 41 | 556 | 1 | 485 | 3.53e-85 | 276 |
| MS.gene005626.t1 | AT3G50840 | 32.836 | 536 | 289 | 9 | 41 | 556 | 1 | 485 | 3.53e-85 | 276 |
| MS.gene005626.t1 | AT5G67440 | 35.430 | 477 | 267 | 11 | 18 | 478 | 25 | 476 | 3.83e-82 | 269 |
| MS.gene005626.t1 | AT5G67440 | 35.430 | 477 | 267 | 11 | 18 | 478 | 25 | 476 | 3.83e-82 | 269 |
| MS.gene005626.t1 | AT4G37590 | 34.151 | 489 | 258 | 13 | 18 | 485 | 25 | 470 | 1.89e-80 | 265 |
| MS.gene005626.t1 | AT5G67440 | 35.498 | 462 | 257 | 11 | 33 | 478 | 3 | 439 | 2.77e-78 | 258 |
| MS.gene005626.t1 | AT3G26490 | 35.141 | 498 | 272 | 10 | 18 | 478 | 24 | 507 | 3.19e-78 | 259 |
| MS.gene005626.t1 | AT3G26490 | 35.141 | 498 | 272 | 10 | 18 | 478 | 24 | 507 | 3.19e-78 | 259 |
| MS.gene005626.t1 | AT3G26490 | 35.141 | 498 | 272 | 10 | 18 | 478 | 24 | 507 | 3.19e-78 | 259 |
| MS.gene005626.t1 | AT2G23050 | 34.043 | 470 | 249 | 10 | 29 | 485 | 36 | 457 | 3.30e-78 | 256 |
| MS.gene005626.t1 | AT5G03250 | 33.602 | 497 | 266 | 14 | 105 | 572 | 1 | 462 | 4.32e-78 | 256 |
| MS.gene005626.t1 | AT5G47800 | 32.520 | 492 | 294 | 9 | 17 | 493 | 23 | 491 | 6.77e-74 | 247 |
| MS.gene005626.t1 | AT5G47800 | 32.520 | 492 | 294 | 9 | 17 | 493 | 23 | 491 | 6.77e-74 | 247 |
| MS.gene005626.t1 | AT5G47800 | 32.520 | 492 | 294 | 9 | 17 | 493 | 23 | 491 | 6.77e-74 | 247 |
| MS.gene005626.t1 | AT4G31820 | 34.382 | 445 | 249 | 9 | 47 | 478 | 1 | 415 | 4.51e-73 | 243 |
| MS.gene005626.t1 | AT5G47800 | 32.394 | 497 | 288 | 9 | 17 | 493 | 136 | 604 | 7.47e-73 | 247 |
| MS.gene005626.t1 | AT5G66560 | 32.225 | 481 | 231 | 10 | 22 | 428 | 21 | 480 | 4.37e-64 | 218 |
| MS.gene005626.t1 | AT1G52770 | 33.421 | 380 | 206 | 5 | 194 | 556 | 28 | 377 | 2.21e-60 | 208 |
| MS.gene005626.t1 | AT3G26490 | 33.113 | 453 | 252 | 10 | 18 | 433 | 24 | 462 | 5.25e-59 | 206 |
| MS.gene005626.t1 | AT5G64330 | 35.989 | 364 | 200 | 10 | 249 | 590 | 371 | 723 | 1.48e-55 | 201 |
| MS.gene005626.t1 | AT5G64330 | 34.137 | 249 | 128 | 2 | 18 | 235 | 50 | 293 | 2.89e-43 | 166 |
| MS.gene005626.t1 | AT2G23050 | 32.134 | 389 | 208 | 9 | 105 | 485 | 1 | 341 | 5.97e-53 | 185 |
| MS.gene005626.t1 | AT3G19850 | 27.195 | 467 | 277 | 6 | 44 | 477 | 28 | 464 | 1.95e-52 | 189 |
| MS.gene005626.t1 | AT3G15570 | 35.548 | 301 | 147 | 5 | 200 | 479 | 35 | 309 | 1.00e-50 | 182 |
| MS.gene005626.t1 | AT5G64330 | 42.915 | 247 | 122 | 5 | 249 | 483 | 312 | 551 | 3.19e-50 | 184 |
| MS.gene005626.t1 | AT5G64330 | 32.479 | 234 | 122 | 2 | 33 | 235 | 6 | 234 | 2.84e-37 | 147 |
| MS.gene005626.t1 | AT5G64330 | 42.915 | 247 | 122 | 5 | 249 | 483 | 371 | 610 | 6.42e-50 | 184 |
| MS.gene005626.t1 | AT5G64330 | 34.137 | 249 | 128 | 2 | 18 | 235 | 50 | 293 | 1.64e-43 | 166 |
| MS.gene005626.t1 | AT5G48130 | 28.631 | 482 | 284 | 12 | 18 | 483 | 37 | 474 | 1.19e-49 | 182 |
| MS.gene005626.t1 | AT1G50280 | 27.216 | 485 | 298 | 10 | 16 | 472 | 3 | 460 | 7.17e-46 | 170 |
| MS.gene005626.t1 | AT1G50280 | 27.397 | 438 | 271 | 8 | 58 | 472 | 14 | 427 | 4.92e-44 | 164 |
| MS.gene005626.t1 | AT3G22104 | 28.540 | 459 | 267 | 10 | 22 | 463 | 6 | 420 | 1.57e-41 | 157 |
| MS.gene005626.t1 | AT3G03510 | 27.778 | 414 | 236 | 11 | 74 | 481 | 8 | 364 | 1.77e-37 | 145 |
| MS.gene005626.t1 | AT5G17580 | 25.996 | 477 | 302 | 11 | 22 | 483 | 22 | 462 | 1.55e-34 | 138 |
| MS.gene005626.t1 | AT5G17580 | 25.996 | 477 | 302 | 11 | 22 | 483 | 7 | 447 | 1.99e-34 | 138 |
| MS.gene005626.t1 | AT3G22104 | 27.390 | 387 | 223 | 7 | 91 | 463 | 3 | 345 | 3.31e-30 | 124 |
| MS.gene005626.t1 | AT3G22104 | 27.390 | 387 | 223 | 7 | 91 | 463 | 3 | 345 | 3.31e-30 | 124 |
| MS.gene005626.t1 | AT3G22104 | 27.390 | 387 | 223 | 7 | 91 | 463 | 3 | 345 | 3.31e-30 | 124 |
| MS.gene005626.t1 | AT3G49900 | 35.664 | 143 | 82 | 4 | 23 | 160 | 68 | 205 | 1.41e-11 | 67.8 |
| MS.gene005626.t1 | AT3G49900 | 35.664 | 143 | 82 | 4 | 23 | 160 | 68 | 205 | 1.45e-11 | 67.8 |
Find 0 sgRNAs with CRISPR-Local
Find 131 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTCATAATTTTATCATTA+AGG | - | 8682:132114-132133 | None:intergenic | 10.0% |
| !!! | TTATTTTGATATAAACTTGT+TGG | - | 8682:133057-133076 | None:intergenic | 15.0% |
| !! | ATTAAGCTTACTTAATTTCT+TGG | - | 8682:134057-134076 | None:intergenic | 20.0% |
| !! | TAATCTTGATTTCTTCAAAA+GGG | + | 8682:132714-132733 | MS.gene005626:CDS | 20.0% |
| !! | TATGCAATTACATAAAAGAA+AGG | - | 8682:131989-132008 | None:intergenic | 20.0% |
| !! | TTAATCTTGATTTCTTCAAA+AGG | + | 8682:132713-132732 | MS.gene005626:CDS | 20.0% |
| !! | TTATTTGCAATGAAATCAAA+GGG | + | 8682:132739-132758 | MS.gene005626:CDS | 20.0% |
| !! | TTTATTTGCAATGAAATCAA+AGG | + | 8682:132738-132757 | MS.gene005626:CDS | 20.0% |
| !!! | AGAATTTTTGAAGAAACAAA+GGG | + | 8682:132846-132865 | MS.gene005626:CDS | 20.0% |
| !!! | CTTCATGTTTTCTTTAAAAA+TGG | + | 8682:132139-132158 | MS.gene005626:intron | 20.0% |
| !!! | CTTTGAAAAATAAAACTCTT+AGG | + | 8682:132030-132049 | MS.gene005626:intron | 20.0% |
| !!! | TAGAATTTTTGAAGAAACAA+AGG | + | 8682:132845-132864 | MS.gene005626:CDS | 20.0% |
| !!! | TGATTTTAGAAGGAAAATTA+TGG | - | 8682:132645-132664 | None:intergenic | 20.0% |
| !!! | TTTTTCCATTTTTCTTAACT+TGG | + | 8682:133122-133141 | MS.gene005626:CDS | 20.0% |
| ! | AAAACAAAGCTCAATTCTTA+AGG | + | 8682:133221-133240 | MS.gene005626:CDS | 25.0% |
| ! | AACTAGTTATTGTTTCAACA+AGG | - | 8682:132873-132892 | None:intergenic | 25.0% |
| ! | AAGATAATTGTCAAGCAATT+TGG | - | 8682:133250-133269 | None:intergenic | 25.0% |
| !! | CATTGATTAATCTGTTAACA+AGG | - | 8682:132567-132586 | None:intergenic | 25.0% |
| !! | CTTTTAGATATCAAATTGTC+CGG | - | 8682:133443-133462 | None:intergenic | 25.0% |
| !! | TTCTGTCATTTCTAGAAAAT+GGG | - | 8682:132413-132432 | None:intergenic | 25.0% |
| !!! | TTAAGAATTGAGCTTTGTTT+TGG | - | 8682:133222-133241 | None:intergenic | 25.0% |
| AAACTTGAGAGAAAAGCTAT+TGG | - | 8682:132928-132947 | None:intergenic | 30.0% | |
| AACTTTGATGGAAACAAGTT+TGG | - | 8682:133291-133310 | None:intergenic | 30.0% | |
| AATGAGAGATGAAACTGAAA+TGG | + | 8682:133170-133189 | MS.gene005626:CDS | 30.0% | |
| AATTCTCTTCAAGTAGTCAA+AGG | + | 8682:132808-132827 | MS.gene005626:CDS | 30.0% | |
| ACTTTGATGGAAACAAGTTT+GGG | - | 8682:133290-133309 | None:intergenic | 30.0% | |
| ATAGGTTCATCCAAACATAA+AGG | + | 8682:133629-133648 | MS.gene005626:intron | 30.0% | |
| ATCTTCACTTTATGATTGTC+TGG | + | 8682:133400-133419 | MS.gene005626:intron | 30.0% | |
| CGAATCATATCTAAAAGAGA+CGG | + | 8682:132465-132484 | MS.gene005626:CDS | 30.0% | |
| CTCATCCAAGTTAAGAAAAA+TGG | - | 8682:133130-133149 | None:intergenic | 30.0% | |
| GATTTAAAGAGCTTATTAGC+AGG | - | 8682:134029-134048 | None:intergenic | 30.0% | |
| GTAAGCTTAATGCATTGTTT+CGG | + | 8682:134066-134085 | MS.gene005626:CDS | 30.0% | |
| TAATCTCTTCAGAAATTGGT+AGG | - | 8682:132543-132562 | None:intergenic | 30.0% | |
| TACTTCTTGTAGATCTGATT+TGG | + | 8682:132978-132997 | MS.gene005626:CDS | 30.0% | |
| TATCATAGATAGTACTGCTA+TGG | - | 8682:133083-133102 | None:intergenic | 30.0% | |
| TTTCAGTTTCATCTCTCATT+CGG | - | 8682:133170-133189 | None:intergenic | 30.0% | |
| ! | ATCAGTTGATATCTTCCTTA+AGG | + | 8682:133371-133390 | MS.gene005626:CDS | 30.0% |
| ! | ATGCTTCTTGTGATAGTTTT+TGG | - | 8682:133692-133711 | None:intergenic | 30.0% |
| ! | CGTCTCTTTTAGATATGATT+CGG | - | 8682:132467-132486 | None:intergenic | 30.0% |
| ! | CTTCTGTCATTTCTAGAAAA+TGG | - | 8682:132414-132433 | None:intergenic | 30.0% |
| ! | GATTTTGTACTTCTTGTCAT+AGG | + | 8682:133611-133630 | MS.gene005626:intron | 30.0% |
| ! | TCAGGTTCAATGATTTTAGA+AGG | - | 8682:132655-132674 | None:intergenic | 30.0% |
| !! | CATTTTTCTTAACTTGGATG+AGG | + | 8682:133128-133147 | MS.gene005626:CDS | 30.0% |
| !!! | TGATAGTTTTTGGCAATCTA+TGG | - | 8682:133682-133701 | None:intergenic | 30.0% |
| AACTCAATCAAGGAAAAGTC+AGG | + | 8682:132900-132919 | MS.gene005626:CDS | 35.0% | |
| AAGGTAATACTCATGCATGT+TGG | - | 8682:132095-132114 | None:intergenic | 35.0% | |
| AATGCATTGTTTCGGATGAA+TGG | + | 8682:134074-134093 | MS.gene005626:CDS | 35.0% | |
| ACAGATTCACAAGGACTAAA+TGG | + | 8682:133525-133544 | MS.gene005626:intron | 35.0% | |
| ACCTAGTTAACAGATTCACA+AGG | + | 8682:133516-133535 | MS.gene005626:intron | 35.0% | |
| ACTGATGCGTAATTATCTCT+TGG | - | 8682:133897-133916 | None:intergenic | 35.0% | |
| AGGCTAATCTCTTCAGAAAT+TGG | - | 8682:132547-132566 | None:intergenic | 35.0% | |
| AGTGAAGATTGCTTACCTTA+AGG | - | 8682:133389-133408 | None:intergenic | 35.0% | |
| ATGAATGGTATTAAGGCGAA+TGG | + | 8682:134089-134108 | MS.gene005626:CDS | 35.0% | |
| ATGATACAGACTCAATTGTG+AGG | + | 8682:133097-133116 | MS.gene005626:CDS | 35.0% | |
| CCATATGCAATTATTCAGCT+AGG | + | 8682:131866-131885 | MS.gene005626:CDS | 35.0% | |
| CCTAGCTGAATAATTGCATA+TGG | - | 8682:131869-131888 | None:intergenic | 35.0% | |
| CTAGCTGCAAAATTCTGTTA+TGG | + | 8682:132337-132356 | MS.gene005626:CDS | 35.0% | |
| GAATGTCTTCAAGAATTGCT+TGG | - | 8682:133029-133048 | None:intergenic | 35.0% | |
| GCAAGTGAAATGAACTTTGA+TGG | - | 8682:133303-133322 | None:intergenic | 35.0% | |
| GTTTACTACCAACTCAATCA+AGG | + | 8682:132890-132909 | MS.gene005626:CDS | 35.0% | |
| GTTTCGGATGAATGGTATTA+AGG | + | 8682:134082-134101 | MS.gene005626:CDS | 35.0% | |
| TCACTAGAGACATCAGATAT+AGG | - | 8682:131907-131926 | None:intergenic | 35.0% | |
| TCCTTGTGAATCTGTTAACT+AGG | - | 8682:133520-133539 | None:intergenic | 35.0% | |
| ! | AGTGATCTTAGCATCGAAAT+AGG | + | 8682:131922-131941 | MS.gene005626:CDS | 35.0% |
| ! | TACAGTTTCCTCTAGTTTCT+AGG | + | 8682:132218-132237 | MS.gene005626:intron | 35.0% |
| ! | TGACTTTTCCTTGATTGAGT+TGG | - | 8682:132901-132920 | None:intergenic | 35.0% |
| ! | TTTCTAGGAGTGGAAGAATT+AGG | + | 8682:132233-132252 | MS.gene005626:CDS | 35.0% |
| !! | AATCTATGGTTTTGCATAGC+CGG | - | 8682:133668-133687 | None:intergenic | 35.0% |
| !! | GTTTATGATTTTGATAGCCC+AGG | + | 8682:133192-133211 | MS.gene005626:CDS | 35.0% |
| !! | TTTTCTTAACTTGGATGAGG+AGG | + | 8682:133131-133150 | MS.gene005626:CDS | 35.0% |
| AACCTGAAACACCTTCAGAA+TGG | + | 8682:132668-132687 | MS.gene005626:CDS | 40.0% | |
| AGTTTCACAACGGTGAAGAA+CGG | - | 8682:132518-132537 | None:intergenic | 40.0% | |
| ATAAGTTTCCCTAGTGTACC+AGG | + | 8682:132295-132314 | MS.gene005626:CDS | 40.0% | |
| CACAATCAACTACTCTTTGG+TGG | + | 8682:133813-133832 | MS.gene005626:CDS | 40.0% | |
| CAGCTAGGTTTGTGTATTAC+AGG | + | 8682:131881-131900 | MS.gene005626:CDS | 40.0% | |
| GCATCTTAGCATAGCAACAT+TGG | - | 8682:132386-132405 | None:intergenic | 40.0% | |
| GGACACAATCAACTACTCTT+TGG | + | 8682:133810-133829 | MS.gene005626:CDS | 40.0% | |
| TGAAACACCTTCAGAATGGT+GGG | + | 8682:132672-132691 | MS.gene005626:CDS | 40.0% | |
| TGAGAGACTACCAGTTCAAA+TGG | + | 8682:133731-133750 | MS.gene005626:CDS | 40.0% | |
| TGCAAAGAGCAACTTACTTC+TGG | + | 8682:132604-132623 | MS.gene005626:CDS | 40.0% | |
| TTCATGCTTTGCACTTCACA+AGG | + | 8682:131948-131967 | MS.gene005626:CDS | 40.0% | |
| TTGGTAGGAGAGTTTCACAA+CGG | - | 8682:132528-132547 | None:intergenic | 40.0% | |
| ! | ACTTGTACTGCCATTTGAAC+TGG | - | 8682:133744-133763 | None:intergenic | 40.0% |
| ! | GAGAATGAGACTCACTGATT+TGG | + | 8682:133959-133978 | MS.gene005626:CDS | 40.0% |
| ! | GGTTTCCTTTTCCAAAGAGA+AGG | + | 8682:134129-134148 | MS.gene005626:CDS | 40.0% |
| ! | GTCCGGTTCTGATAATTTGA+GGG | - | 8682:133426-133445 | None:intergenic | 40.0% |
| ! | TCGATCACATTAGTCTCTGT+GGG | + | 8682:133481-133500 | MS.gene005626:intron | 40.0% |
| ! | TCGCGTCAACAAGTTTTTCT+CGG | - | 8682:132443-132462 | None:intergenic | 40.0% |
| ! | TGTCCGGTTCTGATAATTTG+AGG | - | 8682:133427-133446 | None:intergenic | 40.0% |
| ! | TTACTTCGAGTTTCAGCTCA+CGG | - | 8682:133932-133951 | None:intergenic | 40.0% |
| ! | TTTCCTCTAGTTTCTAGGAG+TGG | + | 8682:132223-132242 | MS.gene005626:CDS | 40.0% |
| !! | CTACTCTTTGGTGGACTAAA+CGG | + | 8682:133822-133841 | MS.gene005626:CDS | 40.0% |
| !! | GTAGATCTGATTTGGAGAGA+AGG | + | 8682:132986-133005 | MS.gene005626:CDS | 40.0% |
| !! | TCTGATTTGGAGAGAAGGAT+TGG | + | 8682:132991-133010 | MS.gene005626:CDS | 40.0% |
| !!! | AGCTTTGTTTTGGAGATCCT+GGG | - | 8682:133212-133231 | None:intergenic | 40.0% |
| ACTGAATGACGCCTTCTCTT+TGG | - | 8682:134143-134162 | None:intergenic | 45.0% | |
| CGCTCTGACTCCTTTATGTT+TGG | - | 8682:133642-133661 | None:intergenic | 45.0% | |
| CTGAAACACCTTCAGAATGG+TGG | + | 8682:132671-132690 | MS.gene005626:CDS | 45.0% | |
| CTTACAATTCGCGCATGATC+AGG | - | 8682:133336-133355 | None:intergenic | 45.0% | |
| CTTCCACTCCTAGAAACTAG+AGG | - | 8682:132229-132248 | None:intergenic | 45.0% | |
| GAAACACCTTCAGAATGGTG+GGG | + | 8682:132673-132692 | MS.gene005626:CDS | 45.0% | |
| GGCCCTCAAATTATCAGAAC+CGG | + | 8682:133421-133440 | MS.gene005626:intron | 45.0% | |
| TAAAGGAGTCAGAGCGATAC+CGG | + | 8682:133646-133665 | MS.gene005626:CDS | 45.0% | |
| TAACTTGGATGAGGAGGATG+AGG | + | 8682:133137-133156 | MS.gene005626:CDS | 45.0% | |
| ! | CTCGATCACATTAGTCTCTG+TGG | + | 8682:133480-133499 | MS.gene005626:intron | 45.0% |
| ! | GATTTTCCCCACCATTCTGA+AGG | - | 8682:132682-132701 | None:intergenic | 45.0% |
| ! | GTCTCTCATTTTGTGCTGCA+TGG | - | 8682:133719-133738 | None:intergenic | 45.0% |
| ! | TGACGCCTTCTCTTTGGAAA+AGG | - | 8682:134137-134156 | None:intergenic | 45.0% |
| !! | CACCATTCTGAAGGTGTTTC+AGG | - | 8682:132673-132692 | None:intergenic | 45.0% |
| !!! | GAGCTTTGTTTTGGAGATCC+TGG | - | 8682:133213-133232 | None:intergenic | 45.0% |
| AGTTTCCCTAGTGTACCAGG+TGG | + | 8682:132298-132317 | MS.gene005626:CDS | 50.0% | |
| ATTGTGTCCTCCTCCGTTCA+TGG | - | 8682:133799-133818 | None:intergenic | 50.0% | |
| CATGCGCGAATTGTAAGCGA+TGG | + | 8682:133339-133358 | MS.gene005626:CDS | 50.0% | |
| GGTATTAAGGCGAATGGCGT+TGG | + | 8682:134095-134114 | MS.gene005626:CDS | 50.0% | |
| GGTCAATTCCCTCAACGTTC+AGG | + | 8682:133843-133862 | MS.gene005626:CDS | 50.0% | |
| !! | TAAGGCGAATGGCGTTGGTT+CGG | + | 8682:134100-134119 | MS.gene005626:CDS | 50.0% |
| CACCACTGCCTGAACGTTGA+GGG | - | 8682:133854-133873 | None:intergenic | 55.0% | |
| CCACACCACCTGGTACACTA+GGG | - | 8682:132306-132325 | None:intergenic | 55.0% | |
| CGTCTTCGCAACGCCATGAA+CGG | + | 8682:133783-133802 | MS.gene005626:CDS | 55.0% | |
| CGTTCATGGCGTTGCGAAGA+CGG | - | 8682:133785-133804 | None:intergenic | 55.0% | |
| TAGTGTACCAGGTGGTGTGG+AGG | + | 8682:132306-132325 | MS.gene005626:CDS | 55.0% | |
| TCAAATGCCTCCACACCACC+TGG | - | 8682:132316-132335 | None:intergenic | 55.0% | |
| TCCACACCACCTGGTACACT+AGG | - | 8682:132307-132326 | None:intergenic | 55.0% | |
| TTCCCTCAACGTTCAGGCAG+TGG | + | 8682:133849-133868 | MS.gene005626:CDS | 55.0% | |
| !! | ATGGCGTTGGTTCGGAGAGT+CGG | + | 8682:134108-134127 | MS.gene005626:CDS | 55.0% |
| CAACGTTCAGGCAGTGGTGC+AGG | + | 8682:133855-133874 | MS.gene005626:CDS | 60.0% | |
| CCCTAGTGTACCAGGTGGTG+TGG | + | 8682:132303-132322 | MS.gene005626:CDS | 60.0% | |
| CTTCGCAACGCCATGAACGG+AGG | + | 8682:133786-133805 | MS.gene005626:CDS | 60.0% | |
| GCACCACTGCCTGAACGTTG+AGG | - | 8682:133855-133874 | None:intergenic | 60.0% | |
| TCAGGCAGTGGTGCAGGAAG+TGG | + | 8682:133861-133880 | MS.gene005626:CDS | 60.0% | |
| CGCAACGCCATGAACGGAGG+AGG | + | 8682:133789-133808 | MS.gene005626:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| 8682 | gene | 131859 | 134169 | 131859 | ID=MS.gene005626 |
| 8682 | mRNA | 131859 | 134169 | 131859 | ID=MS.gene005626.t1;Parent=MS.gene005626 |
| 8682 | exon | 131859 | 131969 | 131859 | ID=MS.gene005626.t1.exon1;Parent=MS.gene005626.t1 |
| 8682 | CDS | 131859 | 131969 | 131859 | ID=cds.MS.gene005626.t1;Parent=MS.gene005626.t1 |
| 8682 | exon | 132223 | 133392 | 132223 | ID=MS.gene005626.t1.exon2;Parent=MS.gene005626.t1 |
| 8682 | CDS | 132223 | 133392 | 132223 | ID=cds.MS.gene005626.t1;Parent=MS.gene005626.t1 |
| 8682 | exon | 133633 | 134169 | 133633 | ID=MS.gene005626.t1.exon3;Parent=MS.gene005626.t1 |
| 8682 | CDS | 133633 | 134169 | 133633 | ID=cds.MS.gene005626.t1;Parent=MS.gene005626.t1 |
| Gene Sequence |
| Protein sequence |
