Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene91300.t1 | XP_003592479.1 | 98.7 | 625 | 8 | 0 | 1 | 625 | 1 | 625 | 0.00E+00 | 1204.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene91300.t1 | O80970 | 58.8 | 646 | 233 | 11 | 1 | 625 | 1 | 634 | 1.8e-198 | 693.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene91300.t1 | G7IE60 | 98.7 | 625 | 8 | 0 | 1 | 625 | 1 | 625 | 0.0e+00 | 1204.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene053173 | MS.gene91300 | 0.816724 | 4.77E-52 | -1.69E-46 |
| MS.gene054551 | MS.gene91300 | 0.806057 | 9.90E-50 | -1.69E-46 |
| MS.gene054633 | MS.gene91300 | 0.80198 | 6.97E-49 | -1.69E-46 |
| MS.gene054662 | MS.gene91300 | 0.801114 | 1.05E-48 | -1.69E-46 |
| MS.gene05640 | MS.gene91300 | 0.813286 | 2.76E-51 | -1.69E-46 |
| MS.gene057367 | MS.gene91300 | 0.831065 | 2.06E-55 | -1.69E-46 |
| MS.gene059538 | MS.gene91300 | 0.806159 | 9.42E-50 | -1.69E-46 |
| MS.gene059553 | MS.gene91300 | 0.813695 | 2.25E-51 | -1.69E-46 |
| MS.gene060275 | MS.gene91300 | 0.91024 | 2.34E-82 | -1.69E-46 |
| MS.gene06093 | MS.gene91300 | 0.839527 | 1.50E-57 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene07138 | MS.gene91300 | PPI |
| MS.gene07618 | MS.gene91300 | PPI |
| MS.gene91300 | MS.gene07187 | PPI |
| MS.gene03028 | MS.gene91300 | PPI |
| MS.gene91300 | MS.gene016088 | PPI |
| MS.gene91300 | MS.gene33115 | PPI |
| MS.gene91300 | MS.gene071612 | PPI |
| MS.gene005626 | MS.gene91300 | PPI |
| MS.gene20706 | MS.gene91300 | PPI |
| MS.gene91300 | MS.gene07620 | PPI |
| MS.gene91300 | MS.gene051487 | PPI |
| MS.gene91300 | MS.gene07622 | PPI |
| MS.gene91300 | MS.gene23003 | PPI |
| MS.gene058484 | MS.gene91300 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene91300.t1 | MTR_1g106430 | 98.720 | 625 | 8 | 0 | 1 | 625 | 1 | 625 | 0.0 | 1264 |
| MS.gene91300.t1 | MTR_5g015790 | 62.323 | 637 | 221 | 9 | 1 | 625 | 1 | 630 | 0.0 | 748 |
| MS.gene91300.t1 | MTR_1g014070 | 55.397 | 491 | 211 | 6 | 1 | 487 | 1 | 487 | 0.0 | 537 |
| MS.gene91300.t1 | MTR_5g032780 | 43.358 | 542 | 267 | 7 | 1 | 507 | 1 | 537 | 4.04e-145 | 435 |
| MS.gene91300.t1 | MTR_8g069330 | 42.289 | 629 | 281 | 16 | 1 | 588 | 1 | 588 | 2.33e-137 | 414 |
| MS.gene91300.t1 | MTR_4g134210 | 37.097 | 558 | 307 | 9 | 1 | 541 | 1 | 531 | 1.30e-122 | 376 |
| MS.gene91300.t1 | MTR_2g009340 | 37.542 | 594 | 308 | 15 | 5 | 546 | 23 | 605 | 4.01e-121 | 375 |
| MS.gene91300.t1 | MTR_4g093850 | 37.828 | 534 | 285 | 8 | 5 | 497 | 23 | 550 | 1.40e-119 | 370 |
| MS.gene91300.t1 | MTR_2g027410 | 36.811 | 508 | 274 | 7 | 1 | 496 | 1 | 473 | 3.39e-113 | 350 |
| MS.gene91300.t1 | MTR_2g018750 | 34.345 | 626 | 360 | 13 | 1 | 608 | 1 | 593 | 2.11e-108 | 339 |
| MS.gene91300.t1 | MTR_1g064360 | 35.263 | 570 | 312 | 14 | 1 | 546 | 1 | 537 | 3.16e-105 | 330 |
| MS.gene91300.t1 | MTR_5g016060 | 39.024 | 492 | 260 | 13 | 25 | 499 | 37 | 505 | 8.49e-105 | 330 |
| MS.gene91300.t1 | MTR_2g084595 | 34.622 | 543 | 311 | 10 | 13 | 528 | 10 | 535 | 8.54e-98 | 312 |
| MS.gene91300.t1 | MTR_8g090220 | 33.925 | 507 | 248 | 12 | 18 | 481 | 42 | 504 | 2.15e-96 | 305 |
| MS.gene91300.t1 | MTR_8g090220 | 31.904 | 583 | 282 | 15 | 18 | 546 | 42 | 563 | 2.17e-96 | 309 |
| MS.gene91300.t1 | MTR_4g022330 | 35.581 | 534 | 318 | 10 | 23 | 546 | 29 | 546 | 7.76e-96 | 306 |
| MS.gene91300.t1 | MTR_1g094850 | 36.614 | 508 | 296 | 13 | 1 | 492 | 1 | 498 | 4.02e-95 | 305 |
| MS.gene91300.t1 | MTR_4g095430 | 36.660 | 491 | 280 | 9 | 25 | 499 | 10 | 485 | 6.90e-95 | 303 |
| MS.gene91300.t1 | MTR_2g027410 | 36.636 | 434 | 230 | 6 | 75 | 496 | 1 | 401 | 1.42e-93 | 297 |
| MS.gene91300.t1 | MTR_4g093850 | 35.950 | 484 | 263 | 8 | 5 | 447 | 23 | 500 | 2.66e-93 | 297 |
| MS.gene91300.t1 | MTR_1g088885 | 35.185 | 540 | 303 | 11 | 26 | 549 | 34 | 542 | 3.34e-93 | 300 |
| MS.gene91300.t1 | MTR_8g078900 | 36.542 | 509 | 271 | 13 | 23 | 488 | 15 | 514 | 4.60e-92 | 298 |
| MS.gene91300.t1 | MTR_2g048390 | 38.043 | 460 | 254 | 8 | 1 | 437 | 1 | 452 | 1.96e-90 | 288 |
| MS.gene91300.t1 | MTR_7g108290 | 35.009 | 537 | 319 | 11 | 26 | 546 | 34 | 556 | 8.01e-88 | 287 |
| MS.gene91300.t1 | MTR_8g078900 | 36.660 | 491 | 259 | 13 | 41 | 488 | 3 | 484 | 2.33e-87 | 285 |
| MS.gene91300.t1 | MTR_7g073980 | 35.081 | 496 | 285 | 11 | 18 | 496 | 23 | 498 | 1.75e-84 | 278 |
| MS.gene91300.t1 | MTR_8g078900 | 37.104 | 442 | 246 | 11 | 70 | 488 | 42 | 474 | 3.11e-82 | 271 |
| MS.gene91300.t1 | MTR_3g062540 | 34.440 | 482 | 266 | 10 | 25 | 493 | 21 | 465 | 6.92e-82 | 269 |
| MS.gene91300.t1 | MTR_5g075640 | 32.193 | 497 | 280 | 8 | 25 | 499 | 22 | 483 | 4.08e-79 | 261 |
| MS.gene91300.t1 | MTR_1g082690 | 28.909 | 550 | 311 | 11 | 11 | 546 | 43 | 526 | 8.97e-79 | 260 |
| MS.gene91300.t1 | MTR_2g084595 | 33.556 | 450 | 260 | 8 | 13 | 437 | 10 | 445 | 1.40e-75 | 248 |
| MS.gene91300.t1 | MTR_5g016060 | 38.107 | 412 | 215 | 13 | 105 | 499 | 3 | 391 | 2.30e-74 | 247 |
| MS.gene91300.t1 | MTR_3g062540 | 33.987 | 459 | 253 | 10 | 48 | 493 | 2 | 423 | 3.62e-73 | 244 |
| MS.gene91300.t1 | MTR_5g075640 | 31.435 | 474 | 268 | 8 | 48 | 499 | 2 | 440 | 2.81e-70 | 237 |
| MS.gene91300.t1 | MTR_8g078900 | 34.498 | 458 | 248 | 13 | 23 | 437 | 15 | 463 | 8.90e-69 | 231 |
| MS.gene91300.t1 | MTR_2g102730 | 39.617 | 313 | 152 | 6 | 213 | 506 | 24 | 318 | 1.22e-59 | 205 |
| MS.gene91300.t1 | MTR_8g078900 | 34.783 | 391 | 223 | 11 | 70 | 437 | 42 | 423 | 3.05e-59 | 204 |
| MS.gene91300.t1 | MTR_4g011530 | 33.659 | 410 | 229 | 9 | 207 | 605 | 40 | 417 | 1.44e-57 | 201 |
| MS.gene91300.t1 | MTR_4g045767 | 28.256 | 453 | 286 | 13 | 74 | 518 | 52 | 473 | 8.29e-41 | 156 |
| MS.gene91300.t1 | MTR_4g074190 | 26.680 | 491 | 311 | 14 | 29 | 493 | 4 | 471 | 5.31e-40 | 154 |
| MS.gene91300.t1 | MTR_4g074190 | 26.517 | 445 | 284 | 11 | 70 | 493 | 3 | 425 | 4.05e-38 | 148 |
| MS.gene91300.t1 | MTR_1g035720 | 27.291 | 491 | 283 | 17 | 31 | 486 | 6 | 457 | 3.46e-37 | 145 |
| MS.gene91300.t1 | MTR_4g074190 | 26.437 | 435 | 271 | 14 | 29 | 437 | 4 | 415 | 1.64e-31 | 128 |
| MS.gene91300.t1 | MTR_2g010890 | 27.907 | 387 | 242 | 12 | 96 | 475 | 3 | 359 | 1.65e-28 | 119 |
| MS.gene91300.t1 | MTR_1g105870 | 29.500 | 200 | 123 | 3 | 32 | 229 | 35 | 218 | 4.72e-23 | 99.4 |
| MS.gene91300.t1 | MTR_2g048375 | 49.254 | 67 | 32 | 1 | 454 | 518 | 1 | 67 | 8.12e-11 | 61.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene91300.t1 | AT2G14820 | 61.551 | 593 | 207 | 8 | 1 | 584 | 1 | 581 | 0.0 | 727 |
| MS.gene91300.t1 | AT2G14820 | 61.551 | 593 | 207 | 8 | 1 | 584 | 1 | 581 | 0.0 | 727 |
| MS.gene91300.t1 | AT4G37590 | 50.327 | 612 | 227 | 14 | 1 | 594 | 1 | 553 | 0.0 | 552 |
| MS.gene91300.t1 | AT5G67440 | 49.758 | 619 | 243 | 14 | 1 | 608 | 1 | 562 | 0.0 | 537 |
| MS.gene91300.t1 | AT5G67440 | 49.758 | 619 | 243 | 14 | 1 | 608 | 1 | 562 | 0.0 | 537 |
| MS.gene91300.t1 | AT2G23050 | 56.426 | 498 | 169 | 9 | 1 | 493 | 1 | 455 | 0.0 | 526 |
| MS.gene91300.t1 | AT4G31820 | 50.101 | 495 | 221 | 7 | 1 | 492 | 1 | 472 | 5.00e-162 | 476 |
| MS.gene91300.t1 | AT5G67440 | 48.180 | 577 | 232 | 13 | 43 | 608 | 5 | 525 | 2.75e-161 | 473 |
| MS.gene91300.t1 | AT1G67900 | 42.883 | 548 | 265 | 10 | 1 | 512 | 1 | 536 | 3.38e-137 | 414 |
| MS.gene91300.t1 | AT1G67900 | 42.883 | 548 | 265 | 10 | 1 | 512 | 1 | 536 | 3.38e-137 | 414 |
| MS.gene91300.t1 | AT1G67900 | 42.883 | 548 | 265 | 10 | 1 | 512 | 1 | 536 | 3.38e-137 | 414 |
| MS.gene91300.t1 | AT1G67900 | 42.883 | 548 | 265 | 10 | 1 | 512 | 1 | 536 | 3.38e-137 | 414 |
| MS.gene91300.t1 | AT1G67900 | 42.883 | 548 | 265 | 10 | 1 | 512 | 1 | 536 | 3.38e-137 | 414 |
| MS.gene91300.t1 | AT1G67900 | 42.883 | 548 | 265 | 10 | 1 | 512 | 1 | 536 | 3.38e-137 | 414 |
| MS.gene91300.t1 | AT4G31820 | 48.655 | 446 | 204 | 6 | 55 | 497 | 1 | 424 | 2.56e-136 | 408 |
| MS.gene91300.t1 | AT2G23050 | 53.018 | 381 | 137 | 6 | 113 | 493 | 1 | 339 | 1.89e-126 | 377 |
| MS.gene91300.t1 | AT3G26490 | 40.421 | 522 | 272 | 9 | 1 | 493 | 1 | 512 | 8.23e-122 | 374 |
| MS.gene91300.t1 | AT3G26490 | 40.421 | 522 | 272 | 9 | 1 | 493 | 1 | 512 | 8.23e-122 | 374 |
| MS.gene91300.t1 | AT3G26490 | 40.421 | 522 | 272 | 9 | 1 | 493 | 1 | 512 | 8.23e-122 | 374 |
| MS.gene91300.t1 | AT5G47800 | 39.034 | 497 | 269 | 8 | 1 | 486 | 1 | 474 | 3.25e-121 | 371 |
| MS.gene91300.t1 | AT5G47800 | 39.034 | 497 | 269 | 8 | 1 | 486 | 1 | 474 | 3.25e-121 | 371 |
| MS.gene91300.t1 | AT5G47800 | 39.034 | 497 | 269 | 8 | 1 | 486 | 1 | 474 | 3.25e-121 | 371 |
| MS.gene91300.t1 | AT5G47800 | 39.034 | 497 | 269 | 8 | 1 | 486 | 114 | 587 | 1.52e-119 | 370 |
| MS.gene91300.t1 | AT5G03250 | 36.411 | 574 | 318 | 15 | 1 | 547 | 1 | 554 | 8.04e-109 | 340 |
| MS.gene91300.t1 | AT5G13600 | 38.327 | 514 | 278 | 15 | 1 | 492 | 1 | 497 | 7.28e-106 | 332 |
| MS.gene91300.t1 | AT1G30440 | 37.931 | 522 | 284 | 12 | 1 | 492 | 1 | 512 | 1.40e-104 | 331 |
| MS.gene91300.t1 | AT3G26490 | 39.056 | 466 | 245 | 9 | 1 | 437 | 1 | 456 | 2.14e-99 | 312 |
| MS.gene91300.t1 | AT5G67385 | 37.728 | 493 | 275 | 10 | 7 | 488 | 3 | 474 | 6.72e-98 | 312 |
| MS.gene91300.t1 | AT3G44820 | 34.489 | 519 | 302 | 9 | 8 | 494 | 5 | 517 | 1.97e-94 | 304 |
| MS.gene91300.t1 | AT1G03010 | 36.170 | 564 | 303 | 15 | 18 | 546 | 22 | 563 | 1.93e-93 | 301 |
| MS.gene91300.t1 | AT1G03010 | 36.594 | 552 | 297 | 14 | 26 | 546 | 7 | 536 | 2.70e-93 | 300 |
| MS.gene91300.t1 | AT1G03010 | 36.511 | 556 | 300 | 14 | 22 | 546 | 29 | 562 | 5.58e-93 | 300 |
| MS.gene91300.t1 | AT5G48800 | 34.522 | 533 | 315 | 9 | 23 | 546 | 36 | 543 | 9.78e-93 | 298 |
| MS.gene91300.t1 | AT5G66560 | 33.511 | 564 | 285 | 14 | 23 | 509 | 14 | 564 | 1.28e-88 | 289 |
| MS.gene91300.t1 | AT2G47860 | 33.877 | 552 | 309 | 12 | 22 | 546 | 31 | 553 | 2.32e-88 | 288 |
| MS.gene91300.t1 | AT5G10250 | 34.043 | 517 | 257 | 12 | 23 | 499 | 45 | 517 | 7.71e-88 | 286 |
| MS.gene91300.t1 | AT5G67385 | 38.000 | 450 | 248 | 9 | 49 | 488 | 1 | 429 | 3.22e-87 | 283 |
| MS.gene91300.t1 | AT5G67385 | 38.000 | 450 | 248 | 9 | 49 | 488 | 1 | 429 | 3.22e-87 | 283 |
| MS.gene91300.t1 | AT5G67385 | 38.000 | 450 | 248 | 9 | 49 | 488 | 1 | 429 | 3.22e-87 | 283 |
| MS.gene91300.t1 | AT5G67385 | 38.000 | 450 | 248 | 9 | 49 | 488 | 1 | 429 | 3.22e-87 | 283 |
| MS.gene91300.t1 | AT3G08660 | 36.089 | 496 | 269 | 14 | 8 | 496 | 21 | 475 | 7.14e-87 | 282 |
| MS.gene91300.t1 | AT5G66560 | 33.700 | 546 | 272 | 14 | 41 | 509 | 3 | 535 | 2.34e-85 | 280 |
| MS.gene91300.t1 | AT5G10250 | 34.190 | 506 | 256 | 12 | 23 | 499 | 45 | 502 | 8.41e-85 | 278 |
| MS.gene91300.t1 | AT2G30520 | 34.100 | 478 | 266 | 10 | 25 | 488 | 27 | 469 | 8.73e-84 | 275 |
| MS.gene91300.t1 | AT5G66560 | 35.654 | 474 | 259 | 12 | 69 | 509 | 65 | 525 | 1.11e-83 | 275 |
| MS.gene91300.t1 | AT2G47860 | 32.522 | 575 | 309 | 13 | 22 | 546 | 31 | 576 | 4.13e-83 | 274 |
| MS.gene91300.t1 | AT3G08570 | 34.304 | 481 | 280 | 10 | 24 | 488 | 30 | 490 | 3.00e-82 | 271 |
| MS.gene91300.t1 | AT3G49970 | 38.549 | 441 | 210 | 12 | 41 | 473 | 7 | 394 | 6.10e-81 | 265 |
| MS.gene91300.t1 | AT3G49970 | 38.549 | 441 | 210 | 12 | 41 | 473 | 7 | 394 | 6.10e-81 | 265 |
| MS.gene91300.t1 | AT3G50840 | 34.845 | 485 | 261 | 10 | 23 | 488 | 11 | 459 | 5.85e-78 | 258 |
| MS.gene91300.t1 | AT3G08660 | 36.636 | 434 | 235 | 12 | 70 | 496 | 15 | 415 | 1.00e-76 | 254 |
| MS.gene91300.t1 | AT2G30520 | 34.066 | 455 | 251 | 10 | 48 | 488 | 2 | 421 | 9.22e-76 | 252 |
| MS.gene91300.t1 | AT2G30520 | 34.066 | 455 | 251 | 10 | 48 | 488 | 2 | 421 | 9.22e-76 | 252 |
| MS.gene91300.t1 | AT5G03250 | 34.573 | 457 | 262 | 12 | 113 | 547 | 1 | 442 | 3.87e-71 | 238 |
| MS.gene91300.t1 | AT3G50840 | 34.205 | 459 | 247 | 10 | 49 | 488 | 1 | 423 | 3.84e-68 | 231 |
| MS.gene91300.t1 | AT3G50840 | 34.205 | 459 | 247 | 10 | 49 | 488 | 1 | 423 | 3.84e-68 | 231 |
| MS.gene91300.t1 | AT2G47860 | 33.864 | 440 | 240 | 10 | 22 | 437 | 31 | 443 | 1.24e-67 | 227 |
| MS.gene91300.t1 | AT3G08660 | 34.633 | 436 | 238 | 13 | 8 | 437 | 21 | 415 | 2.56e-66 | 223 |
| MS.gene91300.t1 | AT5G66560 | 32.568 | 479 | 246 | 13 | 23 | 437 | 14 | 479 | 6.05e-65 | 221 |
| MS.gene91300.t1 | AT2G47860 | 32.181 | 463 | 240 | 11 | 22 | 437 | 31 | 466 | 1.28e-62 | 214 |
| MS.gene91300.t1 | AT2G47860 | 32.755 | 461 | 257 | 11 | 113 | 546 | 1 | 435 | 6.27e-59 | 206 |
| MS.gene91300.t1 | AT2G47860 | 32.755 | 461 | 257 | 11 | 113 | 546 | 1 | 435 | 6.27e-59 | 206 |
| MS.gene91300.t1 | AT5G64330 | 38.376 | 271 | 145 | 4 | 7 | 260 | 33 | 298 | 2.53e-56 | 202 |
| MS.gene91300.t1 | AT5G64330 | 41.772 | 237 | 115 | 4 | 271 | 488 | 373 | 605 | 7.91e-51 | 187 |
| MS.gene91300.t1 | AT5G64330 | 38.376 | 271 | 145 | 4 | 7 | 260 | 33 | 298 | 7.17e-56 | 202 |
| MS.gene91300.t1 | AT5G64330 | 41.772 | 237 | 115 | 4 | 271 | 488 | 373 | 605 | 8.57e-51 | 188 |
| MS.gene91300.t1 | AT1G52770 | 37.458 | 299 | 151 | 4 | 213 | 493 | 28 | 308 | 8.02e-54 | 191 |
| MS.gene91300.t1 | AT5G64330 | 42.308 | 234 | 118 | 3 | 271 | 488 | 314 | 546 | 2.38e-51 | 187 |
| MS.gene91300.t1 | AT5G64330 | 37.344 | 241 | 130 | 4 | 38 | 260 | 2 | 239 | 1.01e-45 | 171 |
| MS.gene91300.t1 | AT5G48130 | 26.210 | 599 | 376 | 18 | 28 | 608 | 39 | 589 | 1.97e-48 | 179 |
| MS.gene91300.t1 | AT3G15570 | 35.235 | 298 | 153 | 4 | 213 | 488 | 29 | 308 | 4.77e-48 | 175 |
| MS.gene91300.t1 | AT5G17580 | 27.254 | 488 | 312 | 14 | 11 | 488 | 3 | 457 | 3.64e-42 | 160 |
| MS.gene91300.t1 | AT5G17580 | 27.557 | 479 | 296 | 14 | 24 | 488 | 1 | 442 | 1.33e-40 | 156 |
| MS.gene91300.t1 | AT3G19850 | 26.484 | 438 | 277 | 11 | 70 | 487 | 52 | 464 | 3.12e-40 | 155 |
| MS.gene91300.t1 | AT3G03510 | 27.404 | 416 | 235 | 12 | 80 | 488 | 6 | 361 | 3.63e-35 | 139 |
| MS.gene91300.t1 | AT1G50280 | 25.895 | 475 | 296 | 15 | 37 | 482 | 13 | 460 | 3.00e-33 | 134 |
| MS.gene91300.t1 | AT1G50280 | 26.364 | 440 | 273 | 14 | 67 | 482 | 15 | 427 | 9.03e-33 | 132 |
| MS.gene91300.t1 | AT3G22104 | 24.615 | 455 | 294 | 12 | 29 | 473 | 5 | 420 | 7.49e-31 | 127 |
| MS.gene91300.t1 | AT3G22104 | 23.499 | 383 | 243 | 9 | 100 | 473 | 4 | 345 | 2.57e-22 | 100 |
| MS.gene91300.t1 | AT3G22104 | 23.499 | 383 | 243 | 9 | 100 | 473 | 4 | 345 | 2.57e-22 | 100 |
| MS.gene91300.t1 | AT3G22104 | 23.499 | 383 | 243 | 9 | 100 | 473 | 4 | 345 | 2.57e-22 | 100 |
| MS.gene91300.t1 | AT3G49900 | 27.682 | 289 | 157 | 12 | 279 | 547 | 126 | 382 | 3.91e-14 | 75.9 |
| MS.gene91300.t1 | AT3G49900 | 27.397 | 292 | 157 | 13 | 279 | 547 | 126 | 385 | 2.27e-12 | 70.1 |
Find 134 sgRNAs with CRISPR-Local
Find 204 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AACTGAATTCCTCCTATTTC+TGG | 0.150173 | 1.3:-73081656 | None:intergenic |
| ATCATACCCTTGCTGAAATT+TGG | 0.196113 | 1.3:-73080413 | None:intergenic |
| CGTCTCATGATGGCCTTTAC+AGG | 0.230035 | 1.3:+73080915 | MS.gene91300:CDS |
| GGTGTAGATTTAACTTCTTC+AGG | 0.238087 | 1.3:-73081631 | None:intergenic |
| AAATCTGACAATGGTAAATT+AGG | 0.245080 | 1.3:-73080854 | None:intergenic |
| AACATGGATAAGGCTGTTAT+TGG | 0.275085 | 1.3:+73081493 | MS.gene91300:CDS |
| ATTCAATCTAACGATGTAAT+TGG | 0.286357 | 1.3:+73080356 | MS.gene91300:CDS |
| TTCGAGTTCTAACTCCATTC+TGG | 0.292794 | 1.3:-73080244 | None:intergenic |
| TTGATTCCTTTAGCTATGTC+TGG | 0.324835 | 1.3:-73081298 | None:intergenic |
| CAGTGTTTCGTGTAGGTTCT+TGG | 0.326862 | 1.3:+73080508 | MS.gene91300:CDS |
| TCTTCAACCCACCAGTCTTT+TGG | 0.329870 | 1.3:-73080272 | None:intergenic |
| TCTGTAAGCATAAGCTTTCA+AGG | 0.351574 | 1.3:-73080384 | None:intergenic |
| AATCTACACCATCCAGAAAT+AGG | 0.361267 | 1.3:+73081644 | MS.gene91300:CDS |
| CCATCAGTCTGAAATGTATC+TGG | 0.381210 | 1.3:-73078542 | None:intergenic |
| ATAACAGCCTTATCCATGTT+TGG | 0.388738 | 1.3:-73081490 | None:intergenic |
| GGGGACAGCTGAGGAATTAA+AGG | 0.396543 | 1.3:+73081393 | MS.gene91300:CDS |
| GCACCATCCGTGTCATATTC+CGG | 0.403601 | 1.3:-73081370 | None:intergenic |
| ATCGTTAGATTGAATTTCCT+TGG | 0.406677 | 1.3:-73080348 | None:intergenic |
| GAAGAGTATATGCCAGCTAA+TGG | 0.411454 | 1.3:+73081147 | MS.gene91300:CDS |
| TCACAATTCCGAGATTGAAT+TGG | 0.413050 | 1.3:+73080721 | MS.gene91300:CDS |
| TGTAGTCTGAAGAAGGATAA+TGG | 0.416115 | 1.3:-73080069 | None:intergenic |
| ACACGAAACACTGCCTTTCT+CGG | 0.422062 | 1.3:-73080498 | None:intergenic |
| AAACATCGATCTTGAAAAGA+AGG | 0.427976 | 1.3:-73080010 | None:intergenic |
| GTCAGAACCGCTGCGTCATC+GGG | 0.436682 | 1.3:+73081265 | MS.gene91300:CDS |
| GGTCAGAACCGCTGCGTCAT+CGG | 0.438094 | 1.3:+73081264 | MS.gene91300:CDS |
| CTGATGGGAACAACAATGTT+AGG | 0.441088 | 1.3:+73078558 | MS.gene91300:CDS |
| AAGATGAAGTTTATGAAACT+TGG | 0.441776 | 1.3:+73078512 | None:intergenic |
| GAATCAAAGACCTGAGCATT+GGG | 0.443547 | 1.3:+73081314 | MS.gene91300:CDS |
| CAGATATTATTGTCAGCATA+GGG | 0.447255 | 1.3:+73079555 | MS.gene91300:CDS |
| AGAAGTCTTTCATTAAGCTA+TGG | 0.447436 | 1.3:+73081542 | MS.gene91300:CDS |
| TACAAAGTCTTTGTCACCAT+TGG | 0.450362 | 1.3:+73080088 | MS.gene91300:CDS |
| GAAGTCTTTCATTAAGCTAT+GGG | 0.452509 | 1.3:+73081543 | MS.gene91300:CDS |
| AATCACATTGTAAGCATTGA+GGG | 0.462223 | 1.3:-73079931 | None:intergenic |
| ATTCAAATTTCAGACATTCC+TGG | 0.463677 | 1.3:+73079855 | MS.gene91300:CDS |
| GATGTGCTAGTAAAGAGAAT+TGG | 0.464303 | 1.3:+73080581 | MS.gene91300:CDS |
| AAGTTGTTGCCTTCCGAGAA+AGG | 0.469404 | 1.3:+73080485 | MS.gene91300:CDS |
| CTTACAATGTGATTGCTACT+AGG | 0.469814 | 1.3:+73079940 | MS.gene91300:CDS |
| GTGTAGATTTAACTTCTTCA+GGG | 0.472605 | 1.3:-73081630 | None:intergenic |
| GAGAATTGGTCAGCAATTAG+AGG | 0.476150 | 1.3:+73080595 | MS.gene91300:CDS |
| ACCATTGGATGAGGAGCAAA+AGG | 0.477736 | 1.3:+73080103 | MS.gene91300:CDS |
| CTCGAAATGTGCCAAAAGAC+TGG | 0.478657 | 1.3:+73080261 | MS.gene91300:CDS |
| TACATTGTAATCTCTCCATC+TGG | 0.481738 | 1.3:-73080650 | None:intergenic |
| GTATAGTACAGAAAATTGTA+AGG | 0.482058 | 1.3:+73080681 | MS.gene91300:CDS |
| GTCTTTGTCACCATTGGATG+AGG | 0.486439 | 1.3:+73080094 | MS.gene91300:CDS |
| TTTCACCTTTGCTGATACCA+GGG | 0.486873 | 1.3:-73081123 | None:intergenic |
| GTTGGAAACAGTTTCAAAGA+TGG | 0.488525 | 1.3:+73081457 | MS.gene91300:CDS |
| TGCTAAACCAAACATGGATA+AGG | 0.489081 | 1.3:+73081483 | MS.gene91300:CDS |
| CCAGATACATTTCAGACTGA+TGG | 0.490097 | 1.3:+73078542 | MS.gene91300:CDS |
| GAATATGACACGGATGGTGC+GGG | 0.491251 | 1.3:+73081373 | MS.gene91300:CDS |
| ATGGTTGCAAAACTCATAGA+TGG | 0.492757 | 1.3:+73080806 | MS.gene91300:CDS |
| GCTTTCTGCAATCCATTAGC+TGG | 0.493502 | 1.3:-73081159 | None:intergenic |
| GGCTATTGACACATATTTGA+AGG | 0.499410 | 1.3:+73080937 | MS.gene91300:CDS |
| GGAATCAAAGACCTGAGCAT+TGG | 0.502284 | 1.3:+73081313 | MS.gene91300:CDS |
| GAGATTGAATTGGTTGGAGG+TGG | 0.502864 | 1.3:+73080731 | MS.gene91300:CDS |
| TCAGATTCATCTGAGAGTAT+TGG | 0.503452 | 1.3:+73081598 | MS.gene91300:CDS |
| AGTCTGAAATGTATCTGGCT+TGG | 0.503488 | 1.3:-73078537 | None:intergenic |
| AATTCCGAGATTGAATTGGT+TGG | 0.507004 | 1.3:+73080725 | MS.gene91300:CDS |
| AGGTGTGCAGCAGAGTATCT+TGG | 0.508603 | 1.3:+73079960 | MS.gene91300:CDS |
| ATGCATGAAAACATTGAGAA+AGG | 0.510465 | 1.3:+73079984 | MS.gene91300:CDS |
| TCCGAGATTGAATTGGTTGG+AGG | 0.510666 | 1.3:+73080728 | MS.gene91300:CDS |
| GTTGGAGGTGGCGAACTTGA+AGG | 0.511286 | 1.3:+73080743 | MS.gene91300:CDS |
| TCCCGACCTTGAGCTACCGT+TGG | 0.511760 | 1.3:-73081338 | None:intergenic |
| TCAGATATTATTGTCAGCAT+AGG | 0.515648 | 1.3:+73079554 | MS.gene91300:CDS |
| ATCAGATGCCTCTAAGCTGA+TGG | 0.515822 | 1.3:+73080787 | MS.gene91300:CDS |
| AGTTCTAACTCCATTCTGGT+TGG | 0.516845 | 1.3:-73080240 | None:intergenic |
| CATTGAATCTATAGCAAACA+AGG | 0.517035 | 1.3:+73080139 | MS.gene91300:CDS |
| ATGTGTCAATAGCCCTGTAA+AGG | 0.517885 | 1.3:-73080928 | None:intergenic |
| GGAATTAAAGGCATTAAGAA+AGG | 0.526651 | 1.3:+73081405 | MS.gene91300:CDS |
| GGCTTTGAGTCCAACCAGAA+TGG | 0.526969 | 1.3:+73080230 | MS.gene91300:CDS |
| TACCGTTGGACCCAATGCTC+AGG | 0.527764 | 1.3:-73081324 | None:intergenic |
| CTTGAAGGGATAAGAAAGCC+GGG | 0.528275 | 1.3:+73080758 | MS.gene91300:CDS |
| ATCTCTCGTCCGTCTCATGA+TGG | 0.528536 | 1.3:+73080905 | MS.gene91300:CDS |
| AAGGTCGGGAACAACTAATC+CGG | 0.530475 | 1.3:+73081351 | MS.gene91300:CDS |
| TTGAGACAAAGCAACGGAGT+TGG | 0.534244 | 1.3:+73081439 | MS.gene91300:CDS |
| TCCAACGGTAGCTCAAGGTC+GGG | 0.534974 | 1.3:+73081337 | MS.gene91300:CDS |
| GAGGCATCTGATAAAATCCC+CGG | 0.536394 | 1.3:-73080776 | None:intergenic |
| TCGATGTTTCTAAAGTTGAC+TGG | 0.539514 | 1.3:+73080168 | MS.gene91300:CDS |
| ACCTCCAACCAATTCAATCT+CGG | 0.540022 | 1.3:-73080729 | None:intergenic |
| CAATCACATTGTAAGCATTG+AGG | 0.552608 | 1.3:-73079932 | None:intergenic |
| ACTTGAAGGGATAAGAAAGC+CGG | 0.555989 | 1.3:+73080757 | MS.gene91300:CDS |
| AAGACTTTGTAGTCTGAAGA+AGG | 0.556254 | 1.3:-73080076 | None:intergenic |
| GACCTGAGCATTGGGTCCAA+CGG | 0.556700 | 1.3:+73081322 | MS.gene91300:CDS |
| TTGGAGGTGGCGAACTTGAA+GGG | 0.557828 | 1.3:+73080744 | MS.gene91300:CDS |
| TGCTTCGACACATCCTCACA+TGG | 0.560000 | 1.3:-73080437 | None:intergenic |
| CAGGTATGTTGCAAGTGAGT+TGG | 0.560221 | 1.3:+73079529 | MS.gene91300:intron |
| GGAGGACATGGAGAAAATAG+TGG | 0.561699 | 1.3:+73081574 | MS.gene91300:CDS |
| GTCCAACGGTAGCTCAAGGT+CGG | 0.564380 | 1.3:+73081336 | MS.gene91300:CDS |
| AAGCTATGGGCAAGCAAAGG+AGG | 0.564447 | 1.3:+73081556 | MS.gene91300:CDS |
| GTGAGGATGTGTCGAAGCAT+CGG | 0.570340 | 1.3:+73080441 | MS.gene91300:CDS |
| ACCGACACGTGTAATTGTGC+AGG | 0.570689 | 1.3:+73081225 | MS.gene91300:CDS |
| GAGATTACAATGTATGATGT+TGG | 0.570865 | 1.3:+73080659 | MS.gene91300:CDS |
| GAATTCCTCCTATTTCTGGA+TGG | 0.571158 | 1.3:-73081652 | None:intergenic |
| CAGATACATTTCAGACTGAT+GGG | 0.573177 | 1.3:+73078543 | MS.gene91300:CDS |
| GAAACACTGCCTTTCTCGGA+AGG | 0.575743 | 1.3:-73080494 | None:intergenic |
| TGGGCAAGCAAAGGAGGACA+TGG | 0.577855 | 1.3:+73081562 | MS.gene91300:CDS |
| GCAGGTACTACATTTCGAGC+AGG | 0.578783 | 1.3:+73081243 | MS.gene91300:CDS |
| TCAAAGGCACTTGCACCACC+AGG | 0.579140 | 1.3:-73079873 | None:intergenic |
| TGGAGATGCTAAACCAAACA+TGG | 0.581860 | 1.3:+73081477 | MS.gene91300:CDS |
| AGCACTCCAGACATAGCTAA+AGG | 0.582825 | 1.3:+73081292 | MS.gene91300:CDS |
| GTCTCATGATGGCCTTTACA+GGG | 0.582962 | 1.3:+73080916 | MS.gene91300:CDS |
| GGAATATGACACGGATGGTG+CGG | 0.585843 | 1.3:+73081372 | MS.gene91300:CDS |
| AAGTTGCCAAATTTCAGCAA+GGG | 0.593702 | 1.3:+73080407 | MS.gene91300:CDS |
| TTGGGTCCAACGGTAGCTCA+AGG | 0.599883 | 1.3:+73081332 | MS.gene91300:CDS |
| TTGCTATAGATTCAATGCAA+CGG | 0.601629 | 1.3:-73080133 | None:intergenic |
| AAAGTTGCCAAATTTCAGCA+AGG | 0.602734 | 1.3:+73080406 | MS.gene91300:CDS |
| GAAATGTGCCAAAAGACTGG+TGG | 0.606762 | 1.3:+73080264 | MS.gene91300:CDS |
| GGATGGTGCGGGGACAGCTG+AGG | 0.606898 | 1.3:+73081384 | MS.gene91300:CDS |
| ATTAAGCTATGGGCAAGCAA+AGG | 0.609202 | 1.3:+73081553 | MS.gene91300:CDS |
| TGACAACTCTTTGATATGAG+AGG | 0.609742 | 1.3:-73079786 | None:intergenic |
| AAACTTAGCACATATCTCAA+AGG | 0.610871 | 1.3:-73079889 | None:intergenic |
| CTACACCATCCAGAAATAGG+AGG | 0.614194 | 1.3:+73081647 | MS.gene91300:CDS |
| AGAAAGGCAGTGTTTCGTGT+AGG | 0.616869 | 1.3:+73080501 | MS.gene91300:CDS |
| ACCTGCACAATTACACGTGT+CGG | 0.621274 | 1.3:-73081226 | None:intergenic |
| TATAGTACAGAAAATTGTAA+GGG | 0.624280 | 1.3:+73080682 | MS.gene91300:CDS |
| CTGTAAAGGCCATCATGAGA+CGG | 0.630996 | 1.3:-73080914 | None:intergenic |
| AATTGGTCAGCAATTAGAGG+AGG | 0.631067 | 1.3:+73080598 | MS.gene91300:CDS |
| GATCCTTCGCGATTTCAGCA+AGG | 0.642218 | 1.3:-73080832 | None:intergenic |
| AACTAATCCGGAATATGACA+CGG | 0.643937 | 1.3:+73081363 | MS.gene91300:CDS |
| TGCATGCAGTGCAAAACGAG+AGG | 0.647697 | 1.3:+73081200 | MS.gene91300:CDS |
| CAAATTTCAGACATTCCTGG+TGG | 0.649529 | 1.3:+73079858 | MS.gene91300:CDS |
| AATCCGGAATATGACACGGA+TGG | 0.653678 | 1.3:+73081367 | MS.gene91300:CDS |
| GAGCACCCTGGTATCAGCAA+AGG | 0.656688 | 1.3:+73081118 | MS.gene91300:CDS |
| TATAACAAATATCAAAACCA+AGG | 0.664477 | 1.3:+73080331 | MS.gene91300:CDS |
| AAATGTGCCAAAAGACTGGT+GGG | 0.670247 | 1.3:+73080265 | MS.gene91300:CDS |
| AGATATTATTGTCAGCATAG+GGG | 0.671630 | 1.3:+73079556 | MS.gene91300:CDS |
| ATACCTTGCTGAAATCGCGA+AGG | 0.673252 | 1.3:+73080829 | MS.gene91300:CDS |
| CAAGGGTATGATCCCATGTG+AGG | 0.680645 | 1.3:+73080424 | MS.gene91300:CDS |
| GAAACACTACAGGAGCACCC+TGG | 0.682303 | 1.3:+73081106 | MS.gene91300:intron |
| AATATGACACGGATGGTGCG+GGG | 0.682586 | 1.3:+73081374 | MS.gene91300:CDS |
| AGATTAACAAAATCTGACAA+TGG | 0.684164 | 1.3:-73080863 | None:intergenic |
| GCTAGTACCCGATGACGCAG+CGG | 0.707239 | 1.3:-73081272 | None:intergenic |
| GCTTCGACACATCCTCACAT+GGG | 0.708999 | 1.3:-73080436 | None:intergenic |
| TTGAAGGGATAAGAAAGCCG+GGG | 0.713574 | 1.3:+73080759 | MS.gene91300:CDS |
| GCATCGTTGAGACAAAGCAA+CGG | 0.713953 | 1.3:+73081433 | MS.gene91300:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAACTACAAATAAAAAGATT+TGG | - | chr1.3:73079766-73079785 | None:intergenic | 15.0% |
| !! | AAATATTAAAAGAAACTGTT+GGG | - | chr1.3:73078747-73078766 | None:intergenic | 15.0% |
| !! | ATGTTAAAATTTAAATTCTC+TGG | + | chr1.3:73081041-73081060 | MS.gene91300:intron | 15.0% |
| !! | TATGCAAATTTCTTTATATT+AGG | - | chr1.3:73078707-73078726 | None:intergenic | 15.0% |
| !!! | AAATTGCTATTAAATTTATC+AGG | - | chr1.3:73079629-73079648 | None:intergenic | 15.0% |
| !!! | ATTTTTAGTGATTAAGAAAA+TGG | + | chr1.3:73078857-73078876 | MS.gene91300:intron | 15.0% |
| !!! | TTTTAATATTTCTTCACTAT+TGG | + | chr1.3:73078756-73078775 | MS.gene91300:intron | 15.0% |
| !! | ACAAAATTAATCTTTCTGAA+AGG | + | chr1.3:73078926-73078945 | MS.gene91300:intron | 20.0% |
| !! | CAATCTTCTATATTTGAAAA+GGG | - | chr1.3:73079355-73079374 | None:intergenic | 20.0% |
| !! | GAAATATTAAAAGAAACTGT+TGG | - | chr1.3:73078748-73078767 | None:intergenic | 20.0% |
| !! | GTCTAATTGAAAAGTAATAA+TGG | - | chr1.3:73079322-73079341 | None:intergenic | 20.0% |
| !! | TATAACAAATATCAAAACCA+AGG | + | chr1.3:73080331-73080350 | MS.gene91300:CDS | 20.0% |
| !! | TATAGTACAGAAAATTGTAA+GGG | + | chr1.3:73080682-73080701 | MS.gene91300:CDS | 20.0% |
| !! | TCTCTATACTGAATTTAAAA+TGG | - | chr1.3:73080995-73081014 | None:intergenic | 20.0% |
| !! | TTTCTTTATATTAGGAACAA+AGG | - | chr1.3:73078699-73078718 | None:intergenic | 20.0% |
| !!! | AAAATTGATGGATAAATAGA+AGG | - | chr1.3:73079117-73079136 | None:intergenic | 20.0% |
| !!! | AATAGTAATTTAAGCATTGA+CGG | - | chr1.3:73079140-73079159 | None:intergenic | 20.0% |
| !!! | CTTTTCAAATATAGAAGATT+GGG | + | chr1.3:73079354-73079373 | MS.gene91300:intron | 20.0% |
| ! | AAATCTGACAATGGTAAATT+AGG | - | chr1.3:73080857-73080876 | None:intergenic | 25.0% |
| ! | AGAACAAACTATCTAAAAAG+AGG | - | chr1.3:73079489-73079508 | None:intergenic | 25.0% |
| ! | AGATTAACAAAATCTGACAA+TGG | - | chr1.3:73080866-73080885 | None:intergenic | 25.0% |
| ! | ATAATGCTTGATCTAAATGA+AGG | + | chr1.3:73078976-73078995 | MS.gene91300:intron | 25.0% |
| ! | ATTCAATCTAACGATGTAAT+TGG | + | chr1.3:73080356-73080375 | MS.gene91300:CDS | 25.0% |
| ! | CCAATCTTCTATATTTGAAA+AGG | - | chr1.3:73079356-73079375 | None:intergenic | 25.0% |
| ! | CTGTTATTGGAAAAATGAAA+GGG | + | chr1.3:73081506-73081525 | MS.gene91300:CDS | 25.0% |
| ! | GAACAAACTATCTAAAAAGA+GGG | - | chr1.3:73079488-73079507 | None:intergenic | 25.0% |
| ! | GTATAGTACAGAAAATTGTA+AGG | + | chr1.3:73080681-73080700 | MS.gene91300:CDS | 25.0% |
| !! | AAATTTCATTCCTTTTAGTG+TGG | - | chr1.3:73079707-73079726 | None:intergenic | 25.0% |
| !! | CCTTTTCAAATATAGAAGAT+TGG | + | chr1.3:73079353-73079372 | MS.gene91300:intron | 25.0% |
| !! | GATGTTTTCTTCATTATTGA+GGG | - | chr1.3:73079829-73079848 | None:intergenic | 25.0% |
| !! | GTTGTTAAGTTCTTTTACAT+CGG | - | chr1.3:73079238-73079257 | None:intergenic | 25.0% |
| !! | TACAAAGTTTTACTTACACA+AGG | + | chr1.3:73079580-73079599 | MS.gene91300:CDS | 25.0% |
| !! | TTTTTGTAGAATCAGAAGAT+AGG | + | chr1.3:73080552-73080571 | MS.gene91300:CDS | 25.0% |
| !!! | TTCAAAGCATTTTAGTGTAA+CGG | - | chr1.3:73081089-73081108 | None:intergenic | 25.0% |
| AAACATCGATCTTGAAAAGA+AGG | - | chr1.3:73080013-73080032 | None:intergenic | 30.0% | |
| AAACTTAGCACATATCTCAA+AGG | - | chr1.3:73079892-73079911 | None:intergenic | 30.0% | |
| AGAAGTCTTTCATTAAGCTA+TGG | + | chr1.3:73081542-73081561 | MS.gene91300:CDS | 30.0% | |
| AGATATTATTGTCAGCATAG+GGG | + | chr1.3:73079556-73079575 | MS.gene91300:CDS | 30.0% | |
| ATAGTCATGAAGAACATAGA+AGG | - | chr1.3:73078958-73078977 | None:intergenic | 30.0% | |
| ATATAACCGAAAAAAGCTTC+CGG | + | chr1.3:73080199-73080218 | MS.gene91300:CDS | 30.0% | |
| ATCGTTAGATTGAATTTCCT+TGG | - | chr1.3:73080351-73080370 | None:intergenic | 30.0% | |
| ATGCATGAAAACATTGAGAA+AGG | + | chr1.3:73079984-73080003 | MS.gene91300:CDS | 30.0% | |
| ATTCAAATTTCAGACATTCC+TGG | + | chr1.3:73079855-73079874 | MS.gene91300:CDS | 30.0% | |
| CAAAAAAAGGAAGACGAAAA+AGG | - | chr1.3:73078896-73078915 | None:intergenic | 30.0% | |
| CAGATATTATTGTCAGCATA+GGG | + | chr1.3:73079555-73079574 | MS.gene91300:CDS | 30.0% | |
| CATTGAATCTATAGCAAACA+AGG | + | chr1.3:73080139-73080158 | MS.gene91300:CDS | 30.0% | |
| CATTGCATAAAGTAGAAAAG+CGG | - | chr1.3:73078823-73078842 | None:intergenic | 30.0% | |
| GAAGTCTTTCATTAAGCTAT+GGG | + | chr1.3:73081543-73081562 | MS.gene91300:CDS | 30.0% | |
| GAGATTACAATGTATGATGT+TGG | + | chr1.3:73080659-73080678 | MS.gene91300:CDS | 30.0% | |
| GCTATTAAATTTATCAGGCA+TGG | - | chr1.3:73079624-73079643 | None:intergenic | 30.0% | |
| GCTGTTATTGGAAAAATGAA+AGG | + | chr1.3:73081505-73081524 | MS.gene91300:CDS | 30.0% | |
| TCAGATATTATTGTCAGCAT+AGG | + | chr1.3:73079554-73079573 | MS.gene91300:CDS | 30.0% | |
| TTGCTATAGATTCAATGCAA+CGG | - | chr1.3:73080136-73080155 | None:intergenic | 30.0% | |
| ! | ATATGTGCTAAGTTTTGCTA+CGG | + | chr1.3:73079897-73079916 | MS.gene91300:CDS | 30.0% |
| ! | ATTTATCATCTTTTGCCTTG+TGG | + | chr1.3:73079729-73079748 | MS.gene91300:intron | 30.0% |
| ! | CGATGTTTTCTTCATTATTG+AGG | - | chr1.3:73079830-73079849 | None:intergenic | 30.0% |
| ! | GTGTAGATTTAACTTCTTCA+GGG | - | chr1.3:73081633-73081652 | None:intergenic | 30.0% |
| !! | AAAATGCTTTGAAACACTAC+AGG | + | chr1.3:73081096-73081115 | MS.gene91300:intron | 30.0% |
| !! | AATCACATTGTAAGCATTGA+GGG | - | chr1.3:73079934-73079953 | None:intergenic | 30.0% |
| !! | CTTTTTCGTCTTCCTTTTTT+TGG | + | chr1.3:73078894-73078913 | MS.gene91300:intron | 30.0% |
| !! | GGAATTAAAGGCATTAAGAA+AGG | + | chr1.3:73081405-73081424 | MS.gene91300:CDS | 30.0% |
| !! | TTCTTTGAAGCTGTCTTTAT+TGG | + | chr1.3:73079273-73079292 | MS.gene91300:intron | 30.0% |
| !!! | ATTTTGATTAAAGCACCAGA+TGG | + | chr1.3:73080635-73080654 | MS.gene91300:CDS | 30.0% |
| AAAAAGCTTCCGGAAGAAAA+TGG | + | chr1.3:73080209-73080228 | MS.gene91300:CDS | 35.0% | |
| AAAAGAGTAGAACCCTAGAA+TGG | - | chr1.3:73079439-73079458 | None:intergenic | 35.0% | |
| AAAGTTGCCAAATTTCAGCA+AGG | + | chr1.3:73080406-73080425 | MS.gene91300:CDS | 35.0% | |
| AACATGGATAAGGCTGTTAT+TGG | + | chr1.3:73081493-73081512 | MS.gene91300:CDS | 35.0% | |
| AACTAATCCGGAATATGACA+CGG | + | chr1.3:73081363-73081382 | MS.gene91300:CDS | 35.0% | |
| AACTGAATTCCTCCTATTTC+TGG | - | chr1.3:73081659-73081678 | None:intergenic | 35.0% | |
| AAGACTTTGTAGTCTGAAGA+AGG | - | chr1.3:73080079-73080098 | None:intergenic | 35.0% | |
| AAGCGGAAATCAAAACTAGT+AGG | - | chr1.3:73078806-73078825 | None:intergenic | 35.0% | |
| AAGTTGCCAAATTTCAGCAA+GGG | + | chr1.3:73080407-73080426 | MS.gene91300:CDS | 35.0% | |
| AATCTACACCATCCAGAAAT+AGG | + | chr1.3:73081644-73081663 | MS.gene91300:CDS | 35.0% | |
| AATTCCGAGATTGAATTGGT+TGG | + | chr1.3:73080725-73080744 | MS.gene91300:CDS | 35.0% | |
| AATTTATCAGGCATGGTAGA+AGG | - | chr1.3:73079617-73079636 | None:intergenic | 35.0% | |
| ATCATACCCTTGCTGAAATT+TGG | - | chr1.3:73080416-73080435 | None:intergenic | 35.0% | |
| ATGGTTGCAAAACTCATAGA+TGG | + | chr1.3:73080806-73080825 | MS.gene91300:CDS | 35.0% | |
| CAGATACATTTCAGACTGAT+GGG | + | chr1.3:73078543-73078562 | MS.gene91300:CDS | 35.0% | |
| CTTACAATGTGATTGCTACT+AGG | + | chr1.3:73079940-73079959 | MS.gene91300:CDS | 35.0% | |
| GATGTGCTAGTAAAGAGAAT+TGG | + | chr1.3:73080581-73080600 | MS.gene91300:CDS | 35.0% | |
| GGCTATTGACACATATTTGA+AGG | + | chr1.3:73080937-73080956 | MS.gene91300:CDS | 35.0% | |
| GTTGGAAACAGTTTCAAAGA+TGG | + | chr1.3:73081457-73081476 | MS.gene91300:CDS | 35.0% | |
| TACAAAGTCTTTGTCACCAT+TGG | + | chr1.3:73080088-73080107 | MS.gene91300:CDS | 35.0% | |
| TACATTGTAATCTCTCCATC+TGG | - | chr1.3:73080653-73080672 | None:intergenic | 35.0% | |
| TACGAAAAATGCTAGAGCTT+AGG | - | chr1.3:73080037-73080056 | None:intergenic | 35.0% | |
| TCACAATTCCGAGATTGAAT+TGG | + | chr1.3:73080721-73080740 | MS.gene91300:CDS | 35.0% | |
| TCTGTAAGCATAAGCTTTCA+AGG | - | chr1.3:73080387-73080406 | None:intergenic | 35.0% | |
| TGACAACTCTTTGATATGAG+AGG | - | chr1.3:73079789-73079808 | None:intergenic | 35.0% | |
| TGCTAAACCAAACATGGATA+AGG | + | chr1.3:73081483-73081502 | MS.gene91300:CDS | 35.0% | |
| TGTAGTCTGAAGAAGGATAA+TGG | - | chr1.3:73080072-73080091 | None:intergenic | 35.0% | |
| TTGATTCCTTTAGCTATGTC+TGG | - | chr1.3:73081301-73081320 | None:intergenic | 35.0% | |
| ! | ATAACAGCCTTATCCATGTT+TGG | - | chr1.3:73081493-73081512 | None:intergenic | 35.0% |
| ! | ATTCCTTTTAGTGTGGTGTA+AGG | - | chr1.3:73079700-73079719 | None:intergenic | 35.0% |
| ! | CAATCACATTGTAAGCATTG+AGG | - | chr1.3:73079935-73079954 | None:intergenic | 35.0% |
| ! | GGTGTAGATTTAACTTCTTC+AGG | - | chr1.3:73081634-73081653 | None:intergenic | 35.0% |
| ! | TAGCATTTTTCGTAGTTGGA+AGG | + | chr1.3:73080043-73080062 | MS.gene91300:CDS | 35.0% |
| ! | TCAGATTCATCTGAGAGTAT+TGG | + | chr1.3:73081598-73081617 | MS.gene91300:CDS | 35.0% |
| ! | TTCCTTTTAGTGTGGTGTAA+GGG | - | chr1.3:73079699-73079718 | None:intergenic | 35.0% |
| !! | AAGCATTGACGGAAAATTGA+TGG | - | chr1.3:73079129-73079148 | None:intergenic | 35.0% |
| !! | TCGATGTTTCTAAAGTTGAC+TGG | + | chr1.3:73080168-73080187 | MS.gene91300:CDS | 35.0% |
| !!! | TTCGTCTTCCTTTTTTTGGT+TGG | + | chr1.3:73078898-73078917 | MS.gene91300:intron | 35.0% |
| !!! | TTTCTTCCGGAAGCTTTTTT+CGG | - | chr1.3:73080208-73080227 | None:intergenic | 35.0% |
| AAATGTGCCAAAAGACTGGT+GGG | + | chr1.3:73080265-73080284 | MS.gene91300:CDS | 40.0% | |
| AATTGGTCAGCAATTAGAGG+AGG | + | chr1.3:73080598-73080617 | MS.gene91300:CDS | 40.0% | |
| ACCTCCAACCAATTCAATCT+CGG | - | chr1.3:73080732-73080751 | None:intergenic | 40.0% | |
| ACTTGAAGGGATAAGAAAGC+CGG | + | chr1.3:73080757-73080776 | MS.gene91300:CDS | 40.0% | |
| AGATACATGCGGAGAAATGT+AGG | + | chr1.3:73079005-73079024 | MS.gene91300:intron | 40.0% | |
| ATGTGTCAATAGCCCTGTAA+AGG | - | chr1.3:73080931-73080950 | None:intergenic | 40.0% | |
| ATTAAGCTATGGGCAAGCAA+AGG | + | chr1.3:73081553-73081572 | MS.gene91300:CDS | 40.0% | |
| CAAATTTCAGACATTCCTGG+TGG | + | chr1.3:73079858-73079877 | MS.gene91300:CDS | 40.0% | |
| CCAGATACATTTCAGACTGA+TGG | + | chr1.3:73078542-73078561 | MS.gene91300:CDS | 40.0% | |
| CTGATGGGAACAACAATGTT+AGG | + | chr1.3:73078558-73078577 | MS.gene91300:CDS | 40.0% | |
| GAAGGATACACAGATACATG+CGG | + | chr1.3:73078994-73079013 | MS.gene91300:intron | 40.0% | |
| GAATCAAAGACCTGAGCATT+GGG | + | chr1.3:73081314-73081333 | MS.gene91300:CDS | 40.0% | |
| GAGAATTGGTCAGCAATTAG+AGG | + | chr1.3:73080595-73080614 | MS.gene91300:CDS | 40.0% | |
| GTCATGAAGAACATAGAAGG+CGG | - | chr1.3:73078955-73078974 | None:intergenic | 40.0% | |
| TGAATGTACAAGTCCTAGTC+AGG | - | chr1.3:73079064-73079083 | None:intergenic | 40.0% | |
| TGGAGATGCTAAACCAAACA+TGG | + | chr1.3:73081477-73081496 | MS.gene91300:CDS | 40.0% | |
| TGTCATCGCCAACCAAAAAA+AGG | - | chr1.3:73078909-73078928 | None:intergenic | 40.0% | |
| TTATTGTTGCTGACCTGACT+AGG | + | chr1.3:73079048-73079067 | MS.gene91300:intron | 40.0% | |
| TTCCCTTACACCACACTAAA+AGG | + | chr1.3:73079694-73079713 | MS.gene91300:intron | 40.0% | |
| TTGATCTAGCCACCATTCTA+GGG | + | chr1.3:73079424-73079443 | MS.gene91300:intron | 40.0% | |
| TTTCACCTTTGCTGATACCA+GGG | - | chr1.3:73081126-73081145 | None:intergenic | 40.0% | |
| ! | AGTCTGAAATGTATCTGGCT+TGG | - | chr1.3:73078540-73078559 | None:intergenic | 40.0% |
| ! | AGTTCTAACTCCATTCTGGT+TGG | - | chr1.3:73080243-73080262 | None:intergenic | 40.0% |
| ! | CCATCAGTCTGAAATGTATC+TGG | - | chr1.3:73078545-73078564 | None:intergenic | 40.0% |
| ! | GAAGAGTATATGCCAGCTAA+TGG | + | chr1.3:73081147-73081166 | MS.gene91300:CDS | 40.0% |
| ! | GCTCTAGCATTTTTCGTAGT+TGG | + | chr1.3:73080039-73080058 | MS.gene91300:CDS | 40.0% |
| ! | TTCGAGTTCTAACTCCATTC+TGG | - | chr1.3:73080247-73080266 | None:intergenic | 40.0% |
| ! | TTGGAGTATCAGTATCCACA+AGG | - | chr1.3:73079747-73079766 | None:intergenic | 40.0% |
| ! | TTTTCACCTTTGCTGATACC+AGG | - | chr1.3:73081127-73081146 | None:intergenic | 40.0% |
| ! | TTTTGCAACCATCAGCTTAG+AGG | - | chr1.3:73080798-73080817 | None:intergenic | 40.0% |
| !! | GAATTCCTCCTATTTCTGGA+TGG | - | chr1.3:73081655-73081674 | None:intergenic | 40.0% |
| !! | GACTCAAAGCCATTTTCTTC+CGG | - | chr1.3:73080221-73080240 | None:intergenic | 40.0% |
| AAGGTCGGGAACAACTAATC+CGG | + | chr1.3:73081351-73081370 | MS.gene91300:CDS | 45.0% | |
| AAGTTGTTGCCTTCCGAGAA+AGG | + | chr1.3:73080485-73080504 | MS.gene91300:CDS | 45.0% | |
| AATCCGGAATATGACACGGA+TGG | + | chr1.3:73081367-73081386 | MS.gene91300:CDS | 45.0% | |
| ACACGAAACACTGCCTTTCT+CGG | - | chr1.3:73080501-73080520 | None:intergenic | 45.0% | |
| ACCATTGGATGAGGAGCAAA+AGG | + | chr1.3:73080103-73080122 | MS.gene91300:CDS | 45.0% | |
| ACCTGCACAATTACACGTGT+CGG | - | chr1.3:73081229-73081248 | None:intergenic | 45.0% | |
| AGAAAGGCAGTGTTTCGTGT+AGG | + | chr1.3:73080501-73080520 | MS.gene91300:CDS | 45.0% | |
| AGAGTAGAACCCTAGAATGG+TGG | - | chr1.3:73079436-73079455 | None:intergenic | 45.0% | |
| AGCACTCCAGACATAGCTAA+AGG | + | chr1.3:73081292-73081311 | MS.gene91300:CDS | 45.0% | |
| ATACCTTGCTGAAATCGCGA+AGG | + | chr1.3:73080829-73080848 | MS.gene91300:CDS | 45.0% | |
| ATCAGATGCCTCTAAGCTGA+TGG | + | chr1.3:73080787-73080806 | MS.gene91300:CDS | 45.0% | |
| CAGGTATGTTGCAAGTGAGT+TGG | + | chr1.3:73079529-73079548 | MS.gene91300:intron | 45.0% | |
| CAGTGTTTCGTGTAGGTTCT+TGG | + | chr1.3:73080508-73080527 | MS.gene91300:CDS | 45.0% | |
| CTACACCATCCAGAAATAGG+AGG | + | chr1.3:73081647-73081666 | MS.gene91300:CDS | 45.0% | |
| CTCGAAATGTGCCAAAAGAC+TGG | + | chr1.3:73080261-73080280 | MS.gene91300:CDS | 45.0% | |
| CTGTAAAGGCCATCATGAGA+CGG | - | chr1.3:73080917-73080936 | None:intergenic | 45.0% | |
| CTTGAAGGGATAAGAAAGCC+GGG | + | chr1.3:73080758-73080777 | MS.gene91300:CDS | 45.0% | |
| CTTGATCTAGCCACCATTCT+AGG | + | chr1.3:73079423-73079442 | MS.gene91300:intron | 45.0% | |
| GAAATGTGCCAAAAGACTGG+TGG | + | chr1.3:73080264-73080283 | MS.gene91300:CDS | 45.0% | |
| GAGATTGAATTGGTTGGAGG+TGG | + | chr1.3:73080731-73080750 | MS.gene91300:CDS | 45.0% | |
| GCATCGTTGAGACAAAGCAA+CGG | + | chr1.3:73081433-73081452 | MS.gene91300:CDS | 45.0% | |
| GCTTTCTGCAATCCATTAGC+TGG | - | chr1.3:73081162-73081181 | None:intergenic | 45.0% | |
| GGAATCAAAGACCTGAGCAT+TGG | + | chr1.3:73081313-73081332 | MS.gene91300:CDS | 45.0% | |
| GGAGGACATGGAGAAAATAG+TGG | + | chr1.3:73081574-73081593 | MS.gene91300:CDS | 45.0% | |
| GTCTCATGATGGCCTTTACA+GGG | + | chr1.3:73080916-73080935 | MS.gene91300:CDS | 45.0% | |
| GTCTTTGTCACCATTGGATG+AGG | + | chr1.3:73080094-73080113 | MS.gene91300:CDS | 45.0% | |
| TCCGAGATTGAATTGGTTGG+AGG | + | chr1.3:73080728-73080747 | MS.gene91300:CDS | 45.0% | |
| TTGAAGGGATAAGAAAGCCG+GGG | + | chr1.3:73080759-73080778 | MS.gene91300:CDS | 45.0% | |
| TTGAGACAAAGCAACGGAGT+TGG | + | chr1.3:73081439-73081458 | MS.gene91300:CDS | 45.0% | |
| ! | ACCTTTTGCTCCTCATCCAA+TGG | - | chr1.3:73080107-73080126 | None:intergenic | 45.0% |
| ! | GAGGCATCTGATAAAATCCC+CGG | - | chr1.3:73080779-73080798 | None:intergenic | 45.0% |
| ! | TCTTCAACCCACCAGTCTTT+TGG | - | chr1.3:73080275-73080294 | None:intergenic | 45.0% |
| AAGCTATGGGCAAGCAAAGG+AGG | + | chr1.3:73081556-73081575 | MS.gene91300:CDS | 50.0% | |
| AATATGACACGGATGGTGCG+GGG | + | chr1.3:73081374-73081393 | MS.gene91300:CDS | 50.0% | |
| ACAAGATGCCTTTCATGCGC+AGG | + | chr1.3:73079510-73079529 | MS.gene91300:intron | 50.0% | |
| ACCGACACGTGTAATTGTGC+AGG | + | chr1.3:73081225-73081244 | MS.gene91300:CDS | 50.0% | |
| ATCTCTCGTCCGTCTCATGA+TGG | + | chr1.3:73080905-73080924 | MS.gene91300:CDS | 50.0% | |
| CGTCTCATGATGGCCTTTAC+AGG | + | chr1.3:73080915-73080934 | MS.gene91300:CDS | 50.0% | |
| GAAACACTGCCTTTCTCGGA+AGG | - | chr1.3:73080497-73080516 | None:intergenic | 50.0% | |
| GAATATGACACGGATGGTGC+GGG | + | chr1.3:73081373-73081392 | MS.gene91300:CDS | 50.0% | |
| GATCCTTCGCGATTTCAGCA+AGG | - | chr1.3:73080835-73080854 | None:intergenic | 50.0% | |
| GCAACATACCTGCGCATGAA+AGG | - | chr1.3:73079521-73079540 | None:intergenic | 50.0% | |
| GCACCATCCGTGTCATATTC+CGG | - | chr1.3:73081373-73081392 | None:intergenic | 50.0% | |
| GCAGGTACTACATTTCGAGC+AGG | + | chr1.3:73081243-73081262 | MS.gene91300:CDS | 50.0% | |
| GCTTCGACACATCCTCACAT+GGG | - | chr1.3:73080439-73080458 | None:intergenic | 50.0% | |
| GGAATATGACACGGATGGTG+CGG | + | chr1.3:73081372-73081391 | MS.gene91300:CDS | 50.0% | |
| GGGGACAGCTGAGGAATTAA+AGG | + | chr1.3:73081393-73081412 | MS.gene91300:CDS | 50.0% | |
| GTGAGGATGTGTCGAAGCAT+CGG | + | chr1.3:73080441-73080460 | MS.gene91300:CDS | 50.0% | |
| TGCATGCAGTGCAAAACGAG+AGG | + | chr1.3:73081200-73081219 | MS.gene91300:CDS | 50.0% | |
| TGCTTCGACACATCCTCACA+TGG | - | chr1.3:73080440-73080459 | None:intergenic | 50.0% | |
| TTGGAGGTGGCGAACTTGAA+GGG | + | chr1.3:73080744-73080763 | MS.gene91300:CDS | 50.0% | |
| ! | AGGTGTGCAGCAGAGTATCT+TGG | + | chr1.3:73079960-73079979 | MS.gene91300:CDS | 50.0% |
| ! | CAAGGGTATGATCCCATGTG+AGG | + | chr1.3:73080424-73080443 | MS.gene91300:CDS | 50.0% |
| ! | CTCGTTTTGCACTGCATGCA+AGG | - | chr1.3:73081200-73081219 | None:intergenic | 50.0% |
| !! | GGCTTTGAGTCCAACCAGAA+TGG | + | chr1.3:73080230-73080249 | MS.gene91300:CDS | 50.0% |
| GAGCACCCTGGTATCAGCAA+AGG | + | chr1.3:73081118-73081137 | MS.gene91300:CDS | 55.0% | |
| GTCCAACGGTAGCTCAAGGT+CGG | + | chr1.3:73081336-73081355 | MS.gene91300:CDS | 55.0% | |
| GTTGGAGGTGGCGAACTTGA+AGG | + | chr1.3:73080743-73080762 | MS.gene91300:CDS | 55.0% | |
| TACCGTTGGACCCAATGCTC+AGG | - | chr1.3:73081327-73081346 | None:intergenic | 55.0% | |
| TCCAACGGTAGCTCAAGGTC+GGG | + | chr1.3:73081337-73081356 | MS.gene91300:CDS | 55.0% | |
| TGGGCAAGCAAAGGAGGACA+TGG | + | chr1.3:73081562-73081581 | MS.gene91300:CDS | 55.0% | |
| TTGGGTCCAACGGTAGCTCA+AGG | + | chr1.3:73081332-73081351 | MS.gene91300:CDS | 55.0% | |
| !! | GAAACACTACAGGAGCACCC+TGG | + | chr1.3:73081106-73081125 | MS.gene91300:intron | 55.0% |
| !! | GACCTGAGCATTGGGTCCAA+CGG | + | chr1.3:73081322-73081341 | MS.gene91300:CDS | 55.0% |
| !! | TCAAAGGCACTTGCACCACC+AGG | - | chr1.3:73079876-73079895 | None:intergenic | 55.0% |
| GCTAGTACCCGATGACGCAG+CGG | - | chr1.3:73081275-73081294 | None:intergenic | 60.0% | |
| GGTCAGAACCGCTGCGTCAT+CGG | + | chr1.3:73081264-73081283 | MS.gene91300:CDS | 60.0% | |
| GTCAGAACCGCTGCGTCATC+GGG | + | chr1.3:73081265-73081284 | MS.gene91300:CDS | 60.0% | |
| TCCCGACCTTGAGCTACCGT+TGG | - | chr1.3:73081341-73081360 | None:intergenic | 60.0% | |
| GGATGGTGCGGGGACAGCTG+AGG | + | chr1.3:73081384-73081403 | MS.gene91300:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.3 | gene | 73078515 | 73081684 | 73078515 | ID=MS.gene91300 |
| chr1.3 | mRNA | 73078515 | 73081684 | 73078515 | ID=MS.gene91300.t1;Parent=MS.gene91300 |
| chr1.3 | exon | 73078515 | 73078579 | 73078515 | ID=MS.gene91300.t1.exon1;Parent=MS.gene91300.t1 |
| chr1.3 | CDS | 73078515 | 73078579 | 73078515 | ID=cds.MS.gene91300.t1;Parent=MS.gene91300.t1 |
| chr1.3 | exon | 73079532 | 73079601 | 73079532 | ID=MS.gene91300.t1.exon2;Parent=MS.gene91300.t1 |
| chr1.3 | CDS | 73079532 | 73079601 | 73079532 | ID=cds.MS.gene91300.t1;Parent=MS.gene91300.t1 |
| chr1.3 | exon | 73079783 | 73080958 | 73079783 | ID=MS.gene91300.t1.exon3;Parent=MS.gene91300.t1 |
| chr1.3 | CDS | 73079783 | 73080958 | 73079783 | ID=cds.MS.gene91300.t1;Parent=MS.gene91300.t1 |
| chr1.3 | exon | 73081118 | 73081684 | 73081118 | ID=MS.gene91300.t1.exon4;Parent=MS.gene91300.t1 |
| chr1.3 | CDS | 73081118 | 73081684 | 73081118 | ID=cds.MS.gene91300.t1;Parent=MS.gene91300.t1 |
| Gene Sequence |
| Protein sequence |
