Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene060275.t1 | XP_003592479.1 | 98.6 | 625 | 9 | 0 | 1 | 625 | 1 | 625 | 0.00E+00 | 1203.3 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene060275.t1 | O80970 | 58.8 | 646 | 233 | 11 | 1 | 625 | 1 | 634 | 1.8e-198 | 693.7 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene060275.t1 | G7IE60 | 98.6 | 625 | 9 | 0 | 1 | 625 | 1 | 625 | 0.0e+00 | 1203.3 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene053173 | MS.gene060275 | 0.807907 | 4.02E-50 | -1.69E-46 |
MS.gene05640 | MS.gene060275 | 0.804557 | 2.04E-49 | -1.69E-46 |
MS.gene060275 | MS.gene06093 | 0.8372 | 5.98E-57 | -1.69E-46 |
MS.gene060275 | MS.gene063308 | 0.81694 | 4.27E-52 | -1.69E-46 |
MS.gene060275 | MS.gene071422 | 0.830756 | 2.45E-55 | -1.69E-46 |
MS.gene060275 | MS.gene073059 | 0.832377 | 9.79E-56 | -1.69E-46 |
MS.gene060275 | MS.gene073062 | 0.824188 | 9.24E-54 | -1.69E-46 |
MS.gene060275 | MS.gene08109 | 0.802298 | 6.00E-49 | -1.69E-46 |
MS.gene060275 | MS.gene20224 | 0.829424 | 5.19E-55 | -1.69E-46 |
MS.gene060275 | MS.gene38724 | 0.804797 | 1.82E-49 | -1.69E-46 |
MS.gene060275 | MS.gene39911 | 0.808565 | 2.91E-50 | -1.69E-46 |
MS.gene060275 | MS.gene50576 | 0.834375 | 3.11E-56 | -1.69E-46 |
MS.gene060275 | MS.gene55817 | 0.825309 | 5.03E-54 | -1.69E-46 |
MS.gene060275 | MS.gene60269 | 0.805532 | 1.28E-49 | -1.69E-46 |
MS.gene060275 | MS.gene71625 | 0.973133 | 6.48E-136 | -1.69E-46 |
MS.gene060275 | MS.gene72088 | 0.830171 | 3.41E-55 | -1.69E-46 |
MS.gene060275 | MS.gene75761 | 0.819386 | 1.19E-52 | -1.69E-46 |
MS.gene060275 | MS.gene75915 | 0.83007 | 3.61E-55 | -1.69E-46 |
MS.gene060275 | MS.gene75918 | 0.821385 | 4.15E-53 | -1.69E-46 |
MS.gene060275 | MS.gene79921 | 0.812442 | 4.23E-51 | -1.69E-46 |
MS.gene060275 | MS.gene91300 | 0.91024 | 2.34E-82 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene060275 | MS.gene051487 | PPI |
MS.gene07618 | MS.gene060275 | PPI |
MS.gene03028 | MS.gene060275 | PPI |
MS.gene060275 | MS.gene20706 | PPI |
MS.gene060275 | MS.gene07622 | PPI |
MS.gene060275 | MS.gene058484 | PPI |
MS.gene060275 | MS.gene07187 | PPI |
MS.gene060275 | MS.gene23003 | PPI |
MS.gene07138 | MS.gene060275 | PPI |
MS.gene060275 | MS.gene33115 | PPI |
MS.gene060275 | MS.gene016088 | PPI |
MS.gene060275 | MS.gene005626 | PPI |
MS.gene060275 | MS.gene071612 | PPI |
MS.gene060275 | MS.gene07620 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene060275.t1 | MTR_1g106430 | 98.560 | 625 | 9 | 0 | 1 | 625 | 1 | 625 | 0.0 | 1263 |
MS.gene060275.t1 | MTR_5g015790 | 62.166 | 637 | 222 | 9 | 1 | 625 | 1 | 630 | 0.0 | 746 |
MS.gene060275.t1 | MTR_1g014070 | 55.397 | 491 | 211 | 6 | 1 | 487 | 1 | 487 | 0.0 | 537 |
MS.gene060275.t1 | MTR_5g032780 | 43.358 | 542 | 267 | 7 | 1 | 507 | 1 | 537 | 1.98e-145 | 436 |
MS.gene060275.t1 | MTR_8g069330 | 42.289 | 629 | 281 | 16 | 1 | 588 | 1 | 588 | 1.44e-137 | 414 |
MS.gene060275.t1 | MTR_4g134210 | 37.097 | 558 | 307 | 9 | 1 | 541 | 1 | 531 | 7.05e-123 | 377 |
MS.gene060275.t1 | MTR_2g009340 | 37.542 | 594 | 308 | 15 | 5 | 546 | 23 | 605 | 1.34e-120 | 373 |
MS.gene060275.t1 | MTR_4g093850 | 37.828 | 534 | 285 | 8 | 5 | 497 | 23 | 550 | 3.73e-119 | 369 |
MS.gene060275.t1 | MTR_2g027410 | 36.811 | 508 | 274 | 7 | 1 | 496 | 1 | 473 | 1.58e-113 | 351 |
MS.gene060275.t1 | MTR_2g018750 | 34.345 | 626 | 360 | 13 | 1 | 608 | 1 | 593 | 1.14e-108 | 340 |
MS.gene060275.t1 | MTR_1g064360 | 35.439 | 570 | 311 | 14 | 1 | 546 | 1 | 537 | 9.36e-106 | 331 |
MS.gene060275.t1 | MTR_5g016060 | 39.024 | 492 | 260 | 13 | 25 | 499 | 37 | 505 | 8.86e-105 | 330 |
MS.gene060275.t1 | MTR_2g084595 | 34.622 | 543 | 311 | 10 | 13 | 528 | 10 | 535 | 2.22e-97 | 311 |
MS.gene060275.t1 | MTR_8g090220 | 33.925 | 507 | 248 | 12 | 18 | 481 | 42 | 504 | 3.18e-96 | 305 |
MS.gene060275.t1 | MTR_8g090220 | 31.904 | 583 | 282 | 15 | 18 | 546 | 42 | 563 | 3.80e-96 | 308 |
MS.gene060275.t1 | MTR_4g022330 | 35.581 | 534 | 318 | 10 | 23 | 546 | 29 | 546 | 9.59e-96 | 306 |
MS.gene060275.t1 | MTR_4g095430 | 36.660 | 491 | 280 | 9 | 25 | 499 | 10 | 485 | 8.90e-95 | 303 |
MS.gene060275.t1 | MTR_1g094850 | 36.614 | 508 | 296 | 13 | 1 | 492 | 1 | 498 | 1.13e-94 | 303 |
MS.gene060275.t1 | MTR_2g027410 | 36.636 | 434 | 230 | 6 | 75 | 496 | 1 | 401 | 1.33e-93 | 297 |
MS.gene060275.t1 | MTR_1g088885 | 35.185 | 540 | 303 | 11 | 26 | 549 | 34 | 542 | 4.39e-93 | 300 |
MS.gene060275.t1 | MTR_4g093850 | 35.950 | 484 | 263 | 8 | 5 | 447 | 23 | 500 | 6.98e-93 | 296 |
MS.gene060275.t1 | MTR_8g078900 | 36.542 | 509 | 271 | 13 | 23 | 488 | 15 | 514 | 1.37e-91 | 297 |
MS.gene060275.t1 | MTR_2g048390 | 38.043 | 460 | 254 | 8 | 1 | 437 | 1 | 452 | 5.15e-90 | 286 |
MS.gene060275.t1 | MTR_7g108290 | 35.009 | 537 | 319 | 11 | 26 | 546 | 34 | 556 | 1.04e-87 | 287 |
MS.gene060275.t1 | MTR_8g078900 | 36.660 | 491 | 259 | 13 | 41 | 488 | 3 | 484 | 6.73e-87 | 283 |
MS.gene060275.t1 | MTR_7g073980 | 35.081 | 496 | 285 | 11 | 18 | 496 | 23 | 498 | 1.03e-84 | 278 |
MS.gene060275.t1 | MTR_8g078900 | 37.104 | 442 | 246 | 11 | 70 | 488 | 42 | 474 | 3.21e-82 | 271 |
MS.gene060275.t1 | MTR_3g062540 | 34.440 | 482 | 266 | 10 | 25 | 493 | 21 | 465 | 6.57e-82 | 269 |
MS.gene060275.t1 | MTR_5g075640 | 32.193 | 497 | 280 | 8 | 25 | 499 | 22 | 483 | 5.46e-79 | 261 |
MS.gene060275.t1 | MTR_1g082690 | 28.909 | 550 | 311 | 11 | 11 | 546 | 43 | 526 | 2.75e-78 | 258 |
MS.gene060275.t1 | MTR_2g084595 | 33.556 | 450 | 260 | 8 | 13 | 437 | 10 | 445 | 4.40e-75 | 247 |
MS.gene060275.t1 | MTR_5g016060 | 38.107 | 412 | 215 | 13 | 105 | 499 | 3 | 391 | 2.21e-74 | 247 |
MS.gene060275.t1 | MTR_3g062540 | 33.987 | 459 | 253 | 10 | 48 | 493 | 2 | 423 | 3.73e-73 | 244 |
MS.gene060275.t1 | MTR_5g075640 | 31.435 | 474 | 268 | 8 | 48 | 499 | 2 | 440 | 2.56e-70 | 237 |
MS.gene060275.t1 | MTR_8g078900 | 34.498 | 458 | 248 | 13 | 23 | 437 | 15 | 463 | 2.58e-68 | 230 |
MS.gene060275.t1 | MTR_2g102730 | 39.617 | 313 | 152 | 6 | 213 | 506 | 24 | 318 | 1.25e-59 | 205 |
MS.gene060275.t1 | MTR_8g078900 | 34.783 | 391 | 223 | 11 | 70 | 437 | 42 | 423 | 2.75e-59 | 204 |
MS.gene060275.t1 | MTR_4g011530 | 33.659 | 410 | 229 | 9 | 207 | 605 | 40 | 417 | 1.60e-57 | 200 |
MS.gene060275.t1 | MTR_4g045767 | 28.256 | 453 | 286 | 13 | 74 | 518 | 52 | 473 | 8.87e-41 | 156 |
MS.gene060275.t1 | MTR_4g074190 | 26.884 | 491 | 310 | 14 | 29 | 493 | 4 | 471 | 1.80e-40 | 155 |
MS.gene060275.t1 | MTR_4g074190 | 26.517 | 445 | 284 | 11 | 70 | 493 | 3 | 425 | 3.71e-38 | 148 |
MS.gene060275.t1 | MTR_1g035720 | 27.495 | 491 | 282 | 17 | 31 | 486 | 6 | 457 | 1.33e-37 | 147 |
MS.gene060275.t1 | MTR_4g074190 | 26.667 | 435 | 270 | 14 | 29 | 437 | 4 | 415 | 6.01e-32 | 129 |
MS.gene060275.t1 | MTR_2g010890 | 27.907 | 387 | 242 | 12 | 96 | 475 | 3 | 359 | 1.58e-28 | 119 |
MS.gene060275.t1 | MTR_1g105870 | 29.500 | 200 | 123 | 3 | 32 | 229 | 35 | 218 | 5.82e-23 | 99.4 |
MS.gene060275.t1 | MTR_2g048375 | 49.254 | 67 | 32 | 1 | 454 | 518 | 1 | 67 | 8.52e-11 | 61.6 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene060275.t1 | AT2G14820 | 61.551 | 593 | 207 | 8 | 1 | 584 | 1 | 581 | 0.0 | 726 |
MS.gene060275.t1 | AT2G14820 | 61.551 | 593 | 207 | 8 | 1 | 584 | 1 | 581 | 0.0 | 726 |
MS.gene060275.t1 | AT4G37590 | 50.163 | 612 | 228 | 14 | 1 | 594 | 1 | 553 | 0.0 | 551 |
MS.gene060275.t1 | AT5G67440 | 49.758 | 619 | 243 | 14 | 1 | 608 | 1 | 562 | 0.0 | 536 |
MS.gene060275.t1 | AT5G67440 | 49.758 | 619 | 243 | 14 | 1 | 608 | 1 | 562 | 0.0 | 536 |
MS.gene060275.t1 | AT2G23050 | 56.225 | 498 | 170 | 9 | 1 | 493 | 1 | 455 | 0.0 | 524 |
MS.gene060275.t1 | AT4G31820 | 50.101 | 495 | 221 | 7 | 1 | 492 | 1 | 472 | 1.63e-161 | 475 |
MS.gene060275.t1 | AT5G67440 | 48.180 | 577 | 232 | 13 | 43 | 608 | 5 | 525 | 3.03e-161 | 473 |
MS.gene060275.t1 | AT1G67900 | 42.883 | 548 | 265 | 10 | 1 | 512 | 1 | 536 | 1.64e-137 | 415 |
MS.gene060275.t1 | AT1G67900 | 42.883 | 548 | 265 | 10 | 1 | 512 | 1 | 536 | 1.64e-137 | 415 |
MS.gene060275.t1 | AT1G67900 | 42.883 | 548 | 265 | 10 | 1 | 512 | 1 | 536 | 1.64e-137 | 415 |
MS.gene060275.t1 | AT1G67900 | 42.883 | 548 | 265 | 10 | 1 | 512 | 1 | 536 | 1.64e-137 | 415 |
MS.gene060275.t1 | AT1G67900 | 42.883 | 548 | 265 | 10 | 1 | 512 | 1 | 536 | 1.64e-137 | 415 |
MS.gene060275.t1 | AT1G67900 | 42.883 | 548 | 265 | 10 | 1 | 512 | 1 | 536 | 1.64e-137 | 415 |
MS.gene060275.t1 | AT4G31820 | 48.655 | 446 | 204 | 6 | 55 | 497 | 1 | 424 | 2.53e-136 | 408 |
MS.gene060275.t1 | AT2G23050 | 53.018 | 381 | 137 | 6 | 113 | 493 | 1 | 339 | 1.89e-126 | 377 |
MS.gene060275.t1 | AT3G26490 | 40.421 | 522 | 272 | 9 | 1 | 493 | 1 | 512 | 4.47e-122 | 374 |
MS.gene060275.t1 | AT3G26490 | 40.421 | 522 | 272 | 9 | 1 | 493 | 1 | 512 | 4.47e-122 | 374 |
MS.gene060275.t1 | AT3G26490 | 40.421 | 522 | 272 | 9 | 1 | 493 | 1 | 512 | 4.47e-122 | 374 |
MS.gene060275.t1 | AT5G47800 | 39.034 | 497 | 269 | 8 | 1 | 486 | 1 | 474 | 9.53e-121 | 370 |
MS.gene060275.t1 | AT5G47800 | 39.034 | 497 | 269 | 8 | 1 | 486 | 1 | 474 | 9.53e-121 | 370 |
MS.gene060275.t1 | AT5G47800 | 39.034 | 497 | 269 | 8 | 1 | 486 | 1 | 474 | 9.53e-121 | 370 |
MS.gene060275.t1 | AT5G47800 | 39.034 | 497 | 269 | 8 | 1 | 486 | 114 | 587 | 3.85e-119 | 369 |
MS.gene060275.t1 | AT5G03250 | 36.411 | 574 | 318 | 15 | 1 | 547 | 1 | 554 | 2.08e-108 | 339 |
MS.gene060275.t1 | AT5G13600 | 38.327 | 514 | 278 | 15 | 1 | 492 | 1 | 497 | 2.11e-105 | 331 |
MS.gene060275.t1 | AT1G30440 | 37.931 | 522 | 284 | 12 | 1 | 492 | 1 | 512 | 4.96e-104 | 330 |
MS.gene060275.t1 | AT3G26490 | 39.056 | 466 | 245 | 9 | 1 | 437 | 1 | 456 | 9.60e-100 | 313 |
MS.gene060275.t1 | AT5G67385 | 37.728 | 493 | 275 | 10 | 7 | 488 | 3 | 474 | 8.94e-98 | 311 |
MS.gene060275.t1 | AT3G44820 | 34.489 | 519 | 302 | 9 | 8 | 494 | 5 | 517 | 4.83e-94 | 303 |
MS.gene060275.t1 | AT1G03010 | 36.170 | 564 | 303 | 15 | 18 | 546 | 22 | 563 | 2.26e-93 | 301 |
MS.gene060275.t1 | AT1G03010 | 36.594 | 552 | 297 | 14 | 26 | 546 | 7 | 536 | 2.79e-93 | 300 |
MS.gene060275.t1 | AT1G03010 | 36.511 | 556 | 300 | 14 | 22 | 546 | 29 | 562 | 7.12e-93 | 300 |
MS.gene060275.t1 | AT5G48800 | 34.522 | 533 | 315 | 9 | 23 | 546 | 36 | 543 | 9.99e-93 | 298 |
MS.gene060275.t1 | AT2G47860 | 33.877 | 552 | 309 | 12 | 22 | 546 | 31 | 553 | 2.60e-88 | 288 |
MS.gene060275.t1 | AT5G66560 | 33.511 | 564 | 285 | 14 | 23 | 509 | 14 | 564 | 3.82e-88 | 288 |
MS.gene060275.t1 | AT5G10250 | 34.043 | 517 | 257 | 12 | 23 | 499 | 45 | 517 | 1.11e-87 | 285 |
MS.gene060275.t1 | AT5G67385 | 38.000 | 450 | 248 | 9 | 49 | 488 | 1 | 429 | 3.36e-87 | 282 |
MS.gene060275.t1 | AT5G67385 | 38.000 | 450 | 248 | 9 | 49 | 488 | 1 | 429 | 3.36e-87 | 282 |
MS.gene060275.t1 | AT5G67385 | 38.000 | 450 | 248 | 9 | 49 | 488 | 1 | 429 | 3.36e-87 | 282 |
MS.gene060275.t1 | AT5G67385 | 38.000 | 450 | 248 | 9 | 49 | 488 | 1 | 429 | 3.36e-87 | 282 |
MS.gene060275.t1 | AT3G08660 | 36.089 | 496 | 269 | 14 | 8 | 496 | 21 | 475 | 4.09e-87 | 283 |
MS.gene060275.t1 | AT5G66560 | 33.700 | 546 | 272 | 14 | 41 | 509 | 3 | 535 | 7.04e-85 | 278 |
MS.gene060275.t1 | AT5G10250 | 34.190 | 506 | 256 | 12 | 23 | 499 | 45 | 502 | 2.05e-84 | 276 |
MS.gene060275.t1 | AT5G66560 | 35.654 | 474 | 259 | 12 | 69 | 509 | 65 | 525 | 1.07e-83 | 275 |
MS.gene060275.t1 | AT2G30520 | 34.100 | 478 | 266 | 10 | 25 | 488 | 27 | 469 | 1.25e-83 | 274 |
MS.gene060275.t1 | AT2G47860 | 32.522 | 575 | 309 | 13 | 22 | 546 | 31 | 576 | 5.42e-83 | 274 |
MS.gene060275.t1 | AT3G08570 | 34.927 | 481 | 277 | 11 | 24 | 488 | 30 | 490 | 1.91e-82 | 271 |
MS.gene060275.t1 | AT3G49970 | 38.549 | 441 | 210 | 12 | 41 | 473 | 7 | 394 | 3.72e-81 | 265 |
MS.gene060275.t1 | AT3G49970 | 38.549 | 441 | 210 | 12 | 41 | 473 | 7 | 394 | 3.72e-81 | 265 |
MS.gene060275.t1 | AT3G50840 | 34.845 | 485 | 261 | 10 | 23 | 488 | 11 | 459 | 1.97e-77 | 257 |
MS.gene060275.t1 | AT3G08660 | 36.636 | 434 | 235 | 12 | 70 | 496 | 15 | 415 | 8.84e-77 | 254 |
MS.gene060275.t1 | AT2G30520 | 34.066 | 455 | 251 | 10 | 48 | 488 | 2 | 421 | 9.82e-76 | 252 |
MS.gene060275.t1 | AT2G30520 | 34.066 | 455 | 251 | 10 | 48 | 488 | 2 | 421 | 9.82e-76 | 252 |
MS.gene060275.t1 | AT5G03250 | 34.573 | 457 | 262 | 12 | 113 | 547 | 1 | 442 | 5.35e-71 | 237 |
MS.gene060275.t1 | AT3G50840 | 34.205 | 459 | 247 | 10 | 49 | 488 | 1 | 423 | 3.54e-68 | 231 |
MS.gene060275.t1 | AT3G50840 | 34.205 | 459 | 247 | 10 | 49 | 488 | 1 | 423 | 3.54e-68 | 231 |
MS.gene060275.t1 | AT2G47860 | 33.864 | 440 | 240 | 10 | 22 | 437 | 31 | 443 | 1.77e-67 | 227 |
MS.gene060275.t1 | AT3G08660 | 34.633 | 436 | 238 | 13 | 8 | 437 | 21 | 415 | 1.38e-66 | 224 |
MS.gene060275.t1 | AT5G66560 | 32.568 | 479 | 246 | 13 | 23 | 437 | 14 | 479 | 1.91e-64 | 220 |
MS.gene060275.t1 | AT2G47860 | 32.181 | 463 | 240 | 11 | 22 | 437 | 31 | 466 | 1.66e-62 | 214 |
MS.gene060275.t1 | AT2G47860 | 32.755 | 461 | 257 | 11 | 113 | 546 | 1 | 435 | 6.27e-59 | 206 |
MS.gene060275.t1 | AT2G47860 | 32.755 | 461 | 257 | 11 | 113 | 546 | 1 | 435 | 6.27e-59 | 206 |
MS.gene060275.t1 | AT5G64330 | 38.376 | 271 | 145 | 4 | 7 | 260 | 33 | 298 | 6.61e-56 | 201 |
MS.gene060275.t1 | AT5G64330 | 41.772 | 237 | 115 | 4 | 271 | 488 | 373 | 605 | 7.31e-51 | 187 |
MS.gene060275.t1 | AT5G64330 | 38.376 | 271 | 145 | 4 | 7 | 260 | 33 | 298 | 2.08e-55 | 201 |
MS.gene060275.t1 | AT5G64330 | 41.772 | 237 | 115 | 4 | 271 | 488 | 373 | 605 | 8.25e-51 | 188 |
MS.gene060275.t1 | AT1G52770 | 37.458 | 299 | 151 | 4 | 213 | 493 | 28 | 308 | 7.70e-54 | 191 |
MS.gene060275.t1 | AT5G64330 | 42.308 | 234 | 118 | 3 | 271 | 488 | 314 | 546 | 2.17e-51 | 187 |
MS.gene060275.t1 | AT5G64330 | 37.759 | 241 | 129 | 4 | 38 | 260 | 2 | 239 | 3.47e-46 | 172 |
MS.gene060275.t1 | AT5G48130 | 26.210 | 599 | 376 | 18 | 28 | 608 | 39 | 589 | 3.29e-48 | 179 |
MS.gene060275.t1 | AT3G15570 | 35.235 | 298 | 153 | 4 | 213 | 488 | 29 | 308 | 4.77e-48 | 175 |
MS.gene060275.t1 | AT5G17580 | 27.254 | 488 | 312 | 14 | 11 | 488 | 3 | 457 | 1.11e-41 | 159 |
MS.gene060275.t1 | AT3G19850 | 26.484 | 438 | 277 | 11 | 70 | 487 | 52 | 464 | 2.94e-40 | 155 |
MS.gene060275.t1 | AT5G17580 | 27.557 | 479 | 296 | 14 | 24 | 488 | 1 | 442 | 3.71e-40 | 154 |
MS.gene060275.t1 | AT3G03510 | 27.404 | 416 | 235 | 12 | 80 | 488 | 6 | 361 | 4.40e-35 | 138 |
MS.gene060275.t1 | AT1G50280 | 26.105 | 475 | 295 | 15 | 37 | 482 | 13 | 460 | 1.04e-33 | 135 |
MS.gene060275.t1 | AT1G50280 | 26.364 | 440 | 273 | 14 | 67 | 482 | 15 | 427 | 1.02e-32 | 132 |
MS.gene060275.t1 | AT3G22104 | 24.835 | 455 | 293 | 12 | 29 | 473 | 5 | 420 | 2.89e-31 | 128 |
MS.gene060275.t1 | AT3G22104 | 23.499 | 383 | 243 | 9 | 100 | 473 | 4 | 345 | 2.64e-22 | 100 |
MS.gene060275.t1 | AT3G22104 | 23.499 | 383 | 243 | 9 | 100 | 473 | 4 | 345 | 2.64e-22 | 100 |
MS.gene060275.t1 | AT3G22104 | 23.499 | 383 | 243 | 9 | 100 | 473 | 4 | 345 | 2.64e-22 | 100 |
MS.gene060275.t1 | AT3G49900 | 27.682 | 289 | 157 | 12 | 279 | 547 | 126 | 382 | 3.95e-14 | 75.9 |
MS.gene060275.t1 | AT3G49900 | 27.397 | 292 | 157 | 13 | 279 | 547 | 126 | 385 | 2.27e-12 | 70.1 |
Find 135 sgRNAs with CRISPR-Local
Find 205 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
AACTGAATTCCTCCTATTTC+TGG | 0.150173 | 1.2:-79394563 | None:intergenic |
ATCATACCCTTGCTGAAATT+TGG | 0.196113 | 1.2:-79393321 | None:intergenic |
CGTCTCATGATGGCCTTTAC+AGG | 0.230035 | 1.2:+79393823 | MS.gene060275:CDS |
GGTGTAGATTTAACTTCTTC+AGG | 0.238087 | 1.2:-79394538 | None:intergenic |
AAATCTGACAATGGTAAATT+AGG | 0.245080 | 1.2:-79393762 | None:intergenic |
AACATGGATAAGGCTGTTAT+TGG | 0.275085 | 1.2:+79394400 | MS.gene060275:CDS |
ATTCAATCTAACGATGTAAT+TGG | 0.286357 | 1.2:+79393264 | MS.gene060275:CDS |
TTCGAGTTCTAACTCCATTC+TGG | 0.292794 | 1.2:-79393152 | None:intergenic |
TTGATTCCTTTAGCTATGTC+TGG | 0.324835 | 1.2:-79394205 | None:intergenic |
CAGTGTTTCGTGTAGGTTCT+TGG | 0.339564 | 1.2:+79393416 | MS.gene060275:CDS |
GGGGACAGCTGAGGAATTAA+AGG | 0.351547 | 1.2:+79394300 | MS.gene060275:CDS |
TCTGTAAGCATAAGCTTTCA+AGG | 0.351574 | 1.2:-79393292 | None:intergenic |
AATCTACACCATCCAGAAAT+AGG | 0.361267 | 1.2:+79394551 | MS.gene060275:CDS |
CCATCAGTCTGAAATGTATC+TGG | 0.381210 | 1.2:-79391450 | None:intergenic |
ATAACAGCCTTATCCATGTT+TGG | 0.388738 | 1.2:-79394397 | None:intergenic |
GCTCCATCCGTGTCATATTC+CGG | 0.403601 | 1.2:-79394277 | None:intergenic |
ATCGTTAGATTGAATTTCCT+TGG | 0.406677 | 1.2:-79393256 | None:intergenic |
GAAGAGTATATGCCAGCTAA+TGG | 0.411454 | 1.2:+79394054 | MS.gene060275:CDS |
TCACAATTCCGAGATTGAAT+TGG | 0.413050 | 1.2:+79393629 | MS.gene060275:CDS |
TGTAGTCTGAAGAAGGATAA+TGG | 0.416115 | 1.2:-79392977 | None:intergenic |
ACACGAAACACTGCCTTTCT+CGG | 0.422062 | 1.2:-79393406 | None:intergenic |
TCTTCAACCCACCAGTCCTT+TGG | 0.426430 | 1.2:-79393180 | None:intergenic |
AAACATCGATCTTGAAAAGA+AGG | 0.427976 | 1.2:-79392918 | None:intergenic |
GTCAGAACCGCTGCGTCATC+GGG | 0.436682 | 1.2:+79394172 | MS.gene060275:CDS |
GGTCAGAACCGCTGCGTCAT+CGG | 0.438094 | 1.2:+79394171 | MS.gene060275:CDS |
CTGATGGGAACAACAATGTT+AGG | 0.441088 | 1.2:+79391466 | MS.gene060275:CDS |
AAGATGAAGTTTATGAAACT+TGG | 0.441776 | 1.2:+79391420 | None:intergenic |
GAATCAAAGACCTGAGCATT+GGG | 0.443547 | 1.2:+79394221 | MS.gene060275:CDS |
CAGATATTATTGTCAGCATA+GGG | 0.447255 | 1.2:+79392463 | MS.gene060275:CDS |
AGAAGTCTTTCATTAAGCTA+TGG | 0.447436 | 1.2:+79394449 | MS.gene060275:CDS |
TACAAAGTCTTTGTCACCAT+TGG | 0.450362 | 1.2:+79392996 | MS.gene060275:CDS |
GAAGTCTTTCATTAAGCTAT+GGG | 0.452509 | 1.2:+79394450 | MS.gene060275:CDS |
AATCACATTGTAAGCATTGA+GGG | 0.462223 | 1.2:-79392839 | None:intergenic |
ATTCAAATTTCAGACATTCC+TGG | 0.463677 | 1.2:+79392763 | MS.gene060275:CDS |
GATGTGCTAGTAAAGAGAAT+TGG | 0.464303 | 1.2:+79393489 | MS.gene060275:CDS |
AAGTTGTTGCCTTCCGAGAA+AGG | 0.469404 | 1.2:+79393393 | MS.gene060275:CDS |
CTTACAATGTGATTGCTACT+AGG | 0.469814 | 1.2:+79392848 | MS.gene060275:CDS |
GTGTAGATTTAACTTCTTCA+GGG | 0.472605 | 1.2:-79394537 | None:intergenic |
GAGAATTGGTCAGCAATTAG+AGG | 0.476150 | 1.2:+79393503 | MS.gene060275:CDS |
ACCATTGGATGAGGAGCAAA+AGG | 0.477736 | 1.2:+79393011 | MS.gene060275:CDS |
TACATTGTAATCTCTCCATC+TGG | 0.481738 | 1.2:-79393558 | None:intergenic |
GTATAGTACAGAAAATTGTA+AGG | 0.482058 | 1.2:+79393589 | MS.gene060275:CDS |
GTCTTTGTCACCATTGGATG+AGG | 0.486439 | 1.2:+79393002 | MS.gene060275:CDS |
TTTCACCTTTGCTGATACCA+GGG | 0.486873 | 1.2:-79394030 | None:intergenic |
GTTGGAAACAGTTTCAAAGA+TGG | 0.488525 | 1.2:+79394364 | MS.gene060275:CDS |
TGCTAAACCAAACATGGATA+AGG | 0.489081 | 1.2:+79394390 | MS.gene060275:CDS |
CCAGATACATTTCAGACTGA+TGG | 0.490097 | 1.2:+79391450 | MS.gene060275:CDS |
ATGGTTGCAAAACTCATAGA+TGG | 0.492757 | 1.2:+79393714 | MS.gene060275:CDS |
GCTTTCTGCAATCCATTAGC+TGG | 0.493502 | 1.2:-79394066 | None:intergenic |
CTCGAAATGTGCCAAAGGAC+TGG | 0.494491 | 1.2:+79393169 | MS.gene060275:CDS |
GGCTATTGACACATATTTGA+AGG | 0.499410 | 1.2:+79393845 | MS.gene060275:CDS |
GGAATCAAAGACCTGAGCAT+TGG | 0.502284 | 1.2:+79394220 | MS.gene060275:CDS |
GAGATTGAATTGGTTGGAGG+TGG | 0.502864 | 1.2:+79393639 | MS.gene060275:CDS |
TCAGATTCATCTGAGAGTAT+TGG | 0.503452 | 1.2:+79394505 | MS.gene060275:CDS |
AGTCTGAAATGTATCTGGCT+TGG | 0.503488 | 1.2:-79391445 | None:intergenic |
AATTCCGAGATTGAATTGGT+TGG | 0.507004 | 1.2:+79393633 | MS.gene060275:CDS |
AGGTGTGCAGCAGAGTATCT+TGG | 0.508603 | 1.2:+79392868 | MS.gene060275:CDS |
ATGCATGAAAACATTGAGAA+AGG | 0.510465 | 1.2:+79392892 | MS.gene060275:CDS |
TCCGAGATTGAATTGGTTGG+AGG | 0.510666 | 1.2:+79393636 | MS.gene060275:CDS |
GTTGGAGGTGGCGAACTTGA+AGG | 0.511286 | 1.2:+79393651 | MS.gene060275:CDS |
TCCCGACCTTGAGCTACCGT+TGG | 0.511760 | 1.2:-79394245 | None:intergenic |
GAATATGACACGGATGGAGC+GGG | 0.513318 | 1.2:+79394280 | MS.gene060275:CDS |
TCAGATATTATTGTCAGCAT+AGG | 0.515648 | 1.2:+79392462 | MS.gene060275:CDS |
ATCAGATGCCTCTAAGCTGA+TGG | 0.515822 | 1.2:+79393695 | MS.gene060275:CDS |
AGTTCTAACTCCATTCTGGT+TGG | 0.516845 | 1.2:-79393148 | None:intergenic |
CATTGAATCTATAGCAAACA+AGG | 0.517035 | 1.2:+79393047 | MS.gene060275:CDS |
ATGTGTCAATAGCCCTGTAA+AGG | 0.517885 | 1.2:-79393836 | None:intergenic |
GGAATTAAAGGCATTAAGAA+AGG | 0.526651 | 1.2:+79394312 | MS.gene060275:CDS |
GGCTTTGAGTCCAACCAGAA+TGG | 0.526969 | 1.2:+79393138 | MS.gene060275:CDS |
TACCGTTGGACCCAATGCTC+AGG | 0.527764 | 1.2:-79394231 | None:intergenic |
CTTGAAGGGATAAGAAAGCC+GGG | 0.528275 | 1.2:+79393666 | MS.gene060275:CDS |
ATCTCTCGTCCGTCTCATGA+TGG | 0.528536 | 1.2:+79393813 | MS.gene060275:CDS |
AAGGTCGGGAACAACTAATC+CGG | 0.530475 | 1.2:+79394258 | MS.gene060275:CDS |
TTGAGACAAAGCAACGGAGT+TGG | 0.534244 | 1.2:+79394346 | MS.gene060275:CDS |
TCCAACGGTAGCTCAAGGTC+GGG | 0.534974 | 1.2:+79394244 | MS.gene060275:CDS |
GAGGCATCTGATAAAATCCC+CGG | 0.536394 | 1.2:-79393684 | None:intergenic |
TCGATGTTTCTAAAGTTGAC+TGG | 0.539514 | 1.2:+79393076 | MS.gene060275:CDS |
ACCTCCAACCAATTCAATCT+CGG | 0.540022 | 1.2:-79393637 | None:intergenic |
CAATCACATTGTAAGCATTG+AGG | 0.552608 | 1.2:-79392840 | None:intergenic |
ACTTGAAGGGATAAGAAAGC+CGG | 0.555989 | 1.2:+79393665 | MS.gene060275:CDS |
AAGACTTTGTAGTCTGAAGA+AGG | 0.556254 | 1.2:-79392984 | None:intergenic |
GACCTGAGCATTGGGTCCAA+CGG | 0.556700 | 1.2:+79394229 | MS.gene060275:CDS |
TTGGAGGTGGCGAACTTGAA+GGG | 0.557828 | 1.2:+79393652 | MS.gene060275:CDS |
TGCTTCGACACATCCTCACA+TGG | 0.560000 | 1.2:-79393345 | None:intergenic |
CAGGTATGTTGCAAGTGAGT+TGG | 0.560221 | 1.2:+79392437 | MS.gene060275:intron |
GGAGGACATGGAGAAAATAG+TGG | 0.561699 | 1.2:+79394481 | MS.gene060275:CDS |
GTCCAACGGTAGCTCAAGGT+CGG | 0.564380 | 1.2:+79394243 | MS.gene060275:CDS |
AAGCTATGGGCAAGCAAAGG+AGG | 0.564447 | 1.2:+79394463 | MS.gene060275:CDS |
GTGAGGATGTGTCGAAGCAT+CGG | 0.570340 | 1.2:+79393349 | MS.gene060275:CDS |
ACCGACACGTGTAATTGTGC+AGG | 0.570689 | 1.2:+79394132 | MS.gene060275:CDS |
GAGATTACAATGTATGATGT+TGG | 0.570865 | 1.2:+79393567 | MS.gene060275:CDS |
GAATTCCTCCTATTTCTGGA+TGG | 0.571158 | 1.2:-79394559 | None:intergenic |
CAGATACATTTCAGACTGAT+GGG | 0.573177 | 1.2:+79391451 | MS.gene060275:CDS |
GAAACACTGCCTTTCTCGGA+AGG | 0.575743 | 1.2:-79393402 | None:intergenic |
TGGGCAAGCAAAGGAGGACA+TGG | 0.577855 | 1.2:+79394469 | MS.gene060275:CDS |
GCAGGTACTACATTTCGAGC+AGG | 0.578783 | 1.2:+79394150 | MS.gene060275:CDS |
TCAAAGGCACTTGCACCACC+AGG | 0.579140 | 1.2:-79392781 | None:intergenic |
TGGAGATGCTAAACCAAACA+TGG | 0.581860 | 1.2:+79394384 | MS.gene060275:CDS |
AGCACTCCAGACATAGCTAA+AGG | 0.582825 | 1.2:+79394199 | MS.gene060275:CDS |
GTCTCATGATGGCCTTTACA+GGG | 0.582962 | 1.2:+79393824 | MS.gene060275:CDS |
GAAATGTGCCAAAGGACTGG+TGG | 0.588764 | 1.2:+79393172 | MS.gene060275:CDS |
AAGTTGCCAAATTTCAGCAA+GGG | 0.593702 | 1.2:+79393315 | MS.gene060275:CDS |
GGATGGAGCGGGGACAGCTG+AGG | 0.597563 | 1.2:+79394291 | MS.gene060275:CDS |
TTGGGTCCAACGGTAGCTCA+AGG | 0.599883 | 1.2:+79394239 | MS.gene060275:CDS |
TTGCTATAGATTCAATGCAA+CGG | 0.601629 | 1.2:-79393041 | None:intergenic |
AAAGTTGCCAAATTTCAGCA+AGG | 0.602734 | 1.2:+79393314 | MS.gene060275:CDS |
ATTAAGCTATGGGCAAGCAA+AGG | 0.609202 | 1.2:+79394460 | MS.gene060275:CDS |
TGACAACTCTTTGATATGAG+AGG | 0.609742 | 1.2:-79392694 | None:intergenic |
AAACTTAGCACATATCTCAA+AGG | 0.610871 | 1.2:-79392797 | None:intergenic |
GGAATATGACACGGATGGAG+CGG | 0.613455 | 1.2:+79394279 | MS.gene060275:CDS |
CTACACCATCCAGAAATAGG+AGG | 0.614194 | 1.2:+79394554 | MS.gene060275:CDS |
AGAAAGGCAGTGTTTCGTGT+AGG | 0.616869 | 1.2:+79393409 | MS.gene060275:CDS |
ACCTGCACAATTACACGTGT+CGG | 0.621274 | 1.2:-79394133 | None:intergenic |
TATAGTACAGAAAATTGTAA+GGG | 0.624280 | 1.2:+79393590 | MS.gene060275:CDS |
AATCCGGAATATGACACGGA+TGG | 0.625200 | 1.2:+79394274 | MS.gene060275:CDS |
CTGTAAAGGCCATCATGAGA+CGG | 0.630996 | 1.2:-79393822 | None:intergenic |
AATTGGTCAGCAATTAGAGG+AGG | 0.631067 | 1.2:+79393506 | MS.gene060275:CDS |
TGCATGCAGTGCAAAATGAG+AGG | 0.631851 | 1.2:+79394107 | MS.gene060275:CDS |
GATCCTTCGCGATTTCAGCA+AGG | 0.642218 | 1.2:-79393740 | None:intergenic |
AACTAATCCGGAATATGACA+CGG | 0.643937 | 1.2:+79394270 | MS.gene060275:CDS |
CAAATTTCAGACATTCCTGG+TGG | 0.649529 | 1.2:+79392766 | MS.gene060275:CDS |
TAGAACTCGAAATGTGCCAA+AGG | 0.653925 | 1.2:+79393164 | MS.gene060275:CDS |
GAGCACCCTGGTATCAGCAA+AGG | 0.656688 | 1.2:+79394025 | MS.gene060275:CDS |
TATAACAAATATCAAAACCA+AGG | 0.664477 | 1.2:+79393239 | MS.gene060275:CDS |
AGATATTATTGTCAGCATAG+GGG | 0.671630 | 1.2:+79392464 | MS.gene060275:CDS |
ATACCTTGCTGAAATCGCGA+AGG | 0.673252 | 1.2:+79393737 | MS.gene060275:CDS |
AAATGTGCCAAAGGACTGGT+GGG | 0.677067 | 1.2:+79393173 | MS.gene060275:CDS |
CAAGGGTATGATCCCATGTG+AGG | 0.680645 | 1.2:+79393332 | MS.gene060275:CDS |
GAAACACTACAGGAGCACCC+TGG | 0.682303 | 1.2:+79394013 | MS.gene060275:intron |
AGATTAACAAAATCTGACAA+TGG | 0.684164 | 1.2:-79393771 | None:intergenic |
AATATGACACGGATGGAGCG+GGG | 0.701289 | 1.2:+79394281 | MS.gene060275:CDS |
GCTAGTACCCGATGACGCAG+CGG | 0.707239 | 1.2:-79394179 | None:intergenic |
GCTTCGACACATCCTCACAT+GGG | 0.708999 | 1.2:-79393344 | None:intergenic |
TTGAAGGGATAAGAAAGCCG+GGG | 0.713574 | 1.2:+79393667 | MS.gene060275:CDS |
GCATCGTTGAGACAAAGCAA+CGG | 0.713953 | 1.2:+79394340 | MS.gene060275:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAACTACAAATAAAAAGATT+TGG | - | chr1.2:79392674-79392693 | None:intergenic | 15.0% |
!! | AAATATTAAAAGAAACTGTT+GGG | - | chr1.2:79391655-79391674 | None:intergenic | 15.0% |
!! | ATGTTAAAATTTAAATTCTC+TGG | + | chr1.2:79393949-79393968 | MS.gene060275:intron | 15.0% |
!! | TATGCAAATTTCTTTATATT+AGG | - | chr1.2:79391615-79391634 | None:intergenic | 15.0% |
!!! | AAATTGCTATTAAATTTATC+AGG | - | chr1.2:79392537-79392556 | None:intergenic | 15.0% |
!!! | ATTTTTAGTGATTAAGAAAA+TGG | + | chr1.2:79391765-79391784 | MS.gene060275:intron | 15.0% |
!!! | TTTTAATATTTCTTCACTAT+TGG | + | chr1.2:79391664-79391683 | MS.gene060275:intron | 15.0% |
!! | ACAAAATTAATCTTTCTGAA+AGG | + | chr1.2:79391834-79391853 | MS.gene060275:intron | 20.0% |
!! | CAATCTTCTATATTTGAAAA+GGG | - | chr1.2:79392263-79392282 | None:intergenic | 20.0% |
!! | GAAATATTAAAAGAAACTGT+TGG | - | chr1.2:79391656-79391675 | None:intergenic | 20.0% |
!! | GTCTAATTGAAAAGTAATAA+TGG | - | chr1.2:79392230-79392249 | None:intergenic | 20.0% |
!! | TATAACAAATATCAAAACCA+AGG | + | chr1.2:79393239-79393258 | MS.gene060275:CDS | 20.0% |
!! | TATAGTACAGAAAATTGTAA+GGG | + | chr1.2:79393590-79393609 | MS.gene060275:CDS | 20.0% |
!! | TCTCTATACTGAATTTAAAA+TGG | - | chr1.2:79393903-79393922 | None:intergenic | 20.0% |
!! | TTTCTTTATATTAGGAACAA+AGG | - | chr1.2:79391607-79391626 | None:intergenic | 20.0% |
!!! | AAAATTGATGGATAAATAGA+AGG | - | chr1.2:79392025-79392044 | None:intergenic | 20.0% |
!!! | AATAGTAATTTAAGCATTGA+CGG | - | chr1.2:79392048-79392067 | None:intergenic | 20.0% |
!!! | CTTTTCAAATATAGAAGATT+GGG | + | chr1.2:79392262-79392281 | MS.gene060275:intron | 20.0% |
! | AAATCTGACAATGGTAAATT+AGG | - | chr1.2:79393765-79393784 | None:intergenic | 25.0% |
! | AGAACAAACTATCTAAAAAG+AGG | - | chr1.2:79392397-79392416 | None:intergenic | 25.0% |
! | AGATTAACAAAATCTGACAA+TGG | - | chr1.2:79393774-79393793 | None:intergenic | 25.0% |
! | ATAATGCTTGATCTAAATGA+AGG | + | chr1.2:79391884-79391903 | MS.gene060275:intron | 25.0% |
! | ATTCAATCTAACGATGTAAT+TGG | + | chr1.2:79393264-79393283 | MS.gene060275:CDS | 25.0% |
! | CCAATCTTCTATATTTGAAA+AGG | - | chr1.2:79392264-79392283 | None:intergenic | 25.0% |
! | CTGTTATTGGAAAAATGAAA+GGG | + | chr1.2:79394413-79394432 | MS.gene060275:CDS | 25.0% |
! | GAACAAACTATCTAAAAAGA+GGG | - | chr1.2:79392396-79392415 | None:intergenic | 25.0% |
! | GTATAGTACAGAAAATTGTA+AGG | + | chr1.2:79393589-79393608 | MS.gene060275:CDS | 25.0% |
!! | AAATTTCATTCCTTTTAGTG+TGG | - | chr1.2:79392615-79392634 | None:intergenic | 25.0% |
!! | CCTTTTCAAATATAGAAGAT+TGG | + | chr1.2:79392261-79392280 | MS.gene060275:intron | 25.0% |
!! | GATGTTTTCTTCATTATTGA+GGG | - | chr1.2:79392737-79392756 | None:intergenic | 25.0% |
!! | GTTGTTAAGTTCTTTTACAT+CGG | - | chr1.2:79392146-79392165 | None:intergenic | 25.0% |
!! | TACAAAGTTTTTCTTACACA+AGG | + | chr1.2:79392488-79392507 | MS.gene060275:CDS | 25.0% |
!! | TTTTTGTAGAATCAGAAGAT+AGG | + | chr1.2:79393460-79393479 | MS.gene060275:CDS | 25.0% |
!!! | TTCAAAGCATTTTAGTGTAA+CGG | - | chr1.2:79393996-79394015 | None:intergenic | 25.0% |
AAACATCGATCTTGAAAAGA+AGG | - | chr1.2:79392921-79392940 | None:intergenic | 30.0% | |
AAACTTAGCACATATCTCAA+AGG | - | chr1.2:79392800-79392819 | None:intergenic | 30.0% | |
AGAAGTCTTTCATTAAGCTA+TGG | + | chr1.2:79394449-79394468 | MS.gene060275:CDS | 30.0% | |
AGATATTATTGTCAGCATAG+GGG | + | chr1.2:79392464-79392483 | MS.gene060275:CDS | 30.0% | |
ATAGTCATGAAGAACATAGA+AGG | - | chr1.2:79391866-79391885 | None:intergenic | 30.0% | |
ATATAACCGAAAAAAGCTTC+CGG | + | chr1.2:79393107-79393126 | MS.gene060275:CDS | 30.0% | |
ATCGTTAGATTGAATTTCCT+TGG | - | chr1.2:79393259-79393278 | None:intergenic | 30.0% | |
ATGCATGAAAACATTGAGAA+AGG | + | chr1.2:79392892-79392911 | MS.gene060275:CDS | 30.0% | |
ATTCAAATTTCAGACATTCC+TGG | + | chr1.2:79392763-79392782 | MS.gene060275:CDS | 30.0% | |
CAAAAAAAGGAAGACGAAAA+AGG | - | chr1.2:79391804-79391823 | None:intergenic | 30.0% | |
CAGATATTATTGTCAGCATA+GGG | + | chr1.2:79392463-79392482 | MS.gene060275:CDS | 30.0% | |
CATTGAATCTATAGCAAACA+AGG | + | chr1.2:79393047-79393066 | MS.gene060275:CDS | 30.0% | |
CATTGCATAAAGTAGAAAAG+CGG | - | chr1.2:79391731-79391750 | None:intergenic | 30.0% | |
GAAGTCTTTCATTAAGCTAT+GGG | + | chr1.2:79394450-79394469 | MS.gene060275:CDS | 30.0% | |
GAGATTACAATGTATGATGT+TGG | + | chr1.2:79393567-79393586 | MS.gene060275:CDS | 30.0% | |
GCTATTAAATTTATCAGGCA+TGG | - | chr1.2:79392532-79392551 | None:intergenic | 30.0% | |
GCTGTTATTGGAAAAATGAA+AGG | + | chr1.2:79394412-79394431 | MS.gene060275:CDS | 30.0% | |
TCAGATATTATTGTCAGCAT+AGG | + | chr1.2:79392462-79392481 | MS.gene060275:CDS | 30.0% | |
TTGCTATAGATTCAATGCAA+CGG | - | chr1.2:79393044-79393063 | None:intergenic | 30.0% | |
! | ATATGTGCTAAGTTTTGCTA+CGG | + | chr1.2:79392805-79392824 | MS.gene060275:CDS | 30.0% |
! | ATTTATCATCTTTTGCCTTG+TGG | + | chr1.2:79392637-79392656 | MS.gene060275:intron | 30.0% |
! | CGATGTTTTCTTCATTATTG+AGG | - | chr1.2:79392738-79392757 | None:intergenic | 30.0% |
! | GTGTAGATTTAACTTCTTCA+GGG | - | chr1.2:79394540-79394559 | None:intergenic | 30.0% |
!! | AAAATGCTTTGAAACACTAC+AGG | + | chr1.2:79394003-79394022 | MS.gene060275:intron | 30.0% |
!! | AATCACATTGTAAGCATTGA+GGG | - | chr1.2:79392842-79392861 | None:intergenic | 30.0% |
!! | CTTTTTCGTCTTCCTTTTTT+TGG | + | chr1.2:79391802-79391821 | MS.gene060275:intron | 30.0% |
!! | GGAATTAAAGGCATTAAGAA+AGG | + | chr1.2:79394312-79394331 | MS.gene060275:CDS | 30.0% |
!! | TTCTTTGAAGCTGTCTTTAT+TGG | + | chr1.2:79392181-79392200 | MS.gene060275:intron | 30.0% |
!!! | ATTTTGATTAAAGCACCAGA+TGG | + | chr1.2:79393543-79393562 | MS.gene060275:CDS | 30.0% |
AAAAAGCTTCCGGAAGAAAA+TGG | + | chr1.2:79393117-79393136 | MS.gene060275:CDS | 35.0% | |
AAAAGAGTAGAACCCTAGAA+TGG | - | chr1.2:79392347-79392366 | None:intergenic | 35.0% | |
AAAGTTGCCAAATTTCAGCA+AGG | + | chr1.2:79393314-79393333 | MS.gene060275:CDS | 35.0% | |
AACATGGATAAGGCTGTTAT+TGG | + | chr1.2:79394400-79394419 | MS.gene060275:CDS | 35.0% | |
AACTAATCCGGAATATGACA+CGG | + | chr1.2:79394270-79394289 | MS.gene060275:CDS | 35.0% | |
AACTGAATTCCTCCTATTTC+TGG | - | chr1.2:79394566-79394585 | None:intergenic | 35.0% | |
AAGACTTTGTAGTCTGAAGA+AGG | - | chr1.2:79392987-79393006 | None:intergenic | 35.0% | |
AAGCGGAAATCAAAACTAGT+AGG | - | chr1.2:79391714-79391733 | None:intergenic | 35.0% | |
AAGTTGCCAAATTTCAGCAA+GGG | + | chr1.2:79393315-79393334 | MS.gene060275:CDS | 35.0% | |
AATCTACACCATCCAGAAAT+AGG | + | chr1.2:79394551-79394570 | MS.gene060275:CDS | 35.0% | |
AATTCCGAGATTGAATTGGT+TGG | + | chr1.2:79393633-79393652 | MS.gene060275:CDS | 35.0% | |
AATTTATCAGGCATGGTAGA+AGG | - | chr1.2:79392525-79392544 | None:intergenic | 35.0% | |
ATCATACCCTTGCTGAAATT+TGG | - | chr1.2:79393324-79393343 | None:intergenic | 35.0% | |
ATGGTTGCAAAACTCATAGA+TGG | + | chr1.2:79393714-79393733 | MS.gene060275:CDS | 35.0% | |
CAGATACATTTCAGACTGAT+GGG | + | chr1.2:79391451-79391470 | MS.gene060275:CDS | 35.0% | |
CTTACAATGTGATTGCTACT+AGG | + | chr1.2:79392848-79392867 | MS.gene060275:CDS | 35.0% | |
GATGTGCTAGTAAAGAGAAT+TGG | + | chr1.2:79393489-79393508 | MS.gene060275:CDS | 35.0% | |
GGCTATTGACACATATTTGA+AGG | + | chr1.2:79393845-79393864 | MS.gene060275:CDS | 35.0% | |
GTTGGAAACAGTTTCAAAGA+TGG | + | chr1.2:79394364-79394383 | MS.gene060275:CDS | 35.0% | |
TACAAAGTCTTTGTCACCAT+TGG | + | chr1.2:79392996-79393015 | MS.gene060275:CDS | 35.0% | |
TACATTGTAATCTCTCCATC+TGG | - | chr1.2:79393561-79393580 | None:intergenic | 35.0% | |
TACGAAAAATGCTAGAGCTT+AGG | - | chr1.2:79392945-79392964 | None:intergenic | 35.0% | |
TCACAATTCCGAGATTGAAT+TGG | + | chr1.2:79393629-79393648 | MS.gene060275:CDS | 35.0% | |
TCTGTAAGCATAAGCTTTCA+AGG | - | chr1.2:79393295-79393314 | None:intergenic | 35.0% | |
TGACAACTCTTTGATATGAG+AGG | - | chr1.2:79392697-79392716 | None:intergenic | 35.0% | |
TGCTAAACCAAACATGGATA+AGG | + | chr1.2:79394390-79394409 | MS.gene060275:CDS | 35.0% | |
TGTAGTCTGAAGAAGGATAA+TGG | - | chr1.2:79392980-79392999 | None:intergenic | 35.0% | |
TTGATTCCTTTAGCTATGTC+TGG | - | chr1.2:79394208-79394227 | None:intergenic | 35.0% | |
! | ATAACAGCCTTATCCATGTT+TGG | - | chr1.2:79394400-79394419 | None:intergenic | 35.0% |
! | ATTCCTTTTAGTGTGGTGTA+AGG | - | chr1.2:79392608-79392627 | None:intergenic | 35.0% |
! | CAATCACATTGTAAGCATTG+AGG | - | chr1.2:79392843-79392862 | None:intergenic | 35.0% |
! | GGTGTAGATTTAACTTCTTC+AGG | - | chr1.2:79394541-79394560 | None:intergenic | 35.0% |
! | TAGCATTTTTCGTAGTTGGA+AGG | + | chr1.2:79392951-79392970 | MS.gene060275:CDS | 35.0% |
! | TCAGATTCATCTGAGAGTAT+TGG | + | chr1.2:79394505-79394524 | MS.gene060275:CDS | 35.0% |
! | TTCCTTTTAGTGTGGTGTAA+GGG | - | chr1.2:79392607-79392626 | None:intergenic | 35.0% |
!! | AAGCATTGACGGAAAATTGA+TGG | - | chr1.2:79392037-79392056 | None:intergenic | 35.0% |
!! | TCGATGTTTCTAAAGTTGAC+TGG | + | chr1.2:79393076-79393095 | MS.gene060275:CDS | 35.0% |
!!! | TTCGTCTTCCTTTTTTTGGT+TGG | + | chr1.2:79391806-79391825 | MS.gene060275:intron | 35.0% |
!!! | TTTCTTCCGGAAGCTTTTTT+CGG | - | chr1.2:79393116-79393135 | None:intergenic | 35.0% |
AATTGGTCAGCAATTAGAGG+AGG | + | chr1.2:79393506-79393525 | MS.gene060275:CDS | 40.0% | |
ACCTCCAACCAATTCAATCT+CGG | - | chr1.2:79393640-79393659 | None:intergenic | 40.0% | |
ACTTGAAGGGATAAGAAAGC+CGG | + | chr1.2:79393665-79393684 | MS.gene060275:CDS | 40.0% | |
AGATACATGCGGAGAAATGT+AGG | + | chr1.2:79391913-79391932 | MS.gene060275:intron | 40.0% | |
ATGTGTCAATAGCCCTGTAA+AGG | - | chr1.2:79393839-79393858 | None:intergenic | 40.0% | |
ATTAAGCTATGGGCAAGCAA+AGG | + | chr1.2:79394460-79394479 | MS.gene060275:CDS | 40.0% | |
CAAATTTCAGACATTCCTGG+TGG | + | chr1.2:79392766-79392785 | MS.gene060275:CDS | 40.0% | |
CCAGATACATTTCAGACTGA+TGG | + | chr1.2:79391450-79391469 | MS.gene060275:CDS | 40.0% | |
CTGATGGGAACAACAATGTT+AGG | + | chr1.2:79391466-79391485 | MS.gene060275:CDS | 40.0% | |
GAAGGATACACAGATACATG+CGG | + | chr1.2:79391902-79391921 | MS.gene060275:intron | 40.0% | |
GAATCAAAGACCTGAGCATT+GGG | + | chr1.2:79394221-79394240 | MS.gene060275:CDS | 40.0% | |
GAGAATTGGTCAGCAATTAG+AGG | + | chr1.2:79393503-79393522 | MS.gene060275:CDS | 40.0% | |
GTCATGAAGAACATAGAAGG+CGG | - | chr1.2:79391863-79391882 | None:intergenic | 40.0% | |
TAGAACTCGAAATGTGCCAA+AGG | + | chr1.2:79393164-79393183 | MS.gene060275:CDS | 40.0% | |
TGAATGTACAAGTCCTAGTC+AGG | - | chr1.2:79391972-79391991 | None:intergenic | 40.0% | |
TGGAGATGCTAAACCAAACA+TGG | + | chr1.2:79394384-79394403 | MS.gene060275:CDS | 40.0% | |
TGTCATCGCCAACCAAAAAA+AGG | - | chr1.2:79391817-79391836 | None:intergenic | 40.0% | |
TTATTGTTGCTGACCTGACT+AGG | + | chr1.2:79391956-79391975 | MS.gene060275:intron | 40.0% | |
TTCCCTTACACCACACTAAA+AGG | + | chr1.2:79392602-79392621 | MS.gene060275:intron | 40.0% | |
TTGATCTAGCCACCATTCTA+GGG | + | chr1.2:79392332-79392351 | MS.gene060275:intron | 40.0% | |
TTTCACCTTTGCTGATACCA+GGG | - | chr1.2:79394033-79394052 | None:intergenic | 40.0% | |
! | AGTCTGAAATGTATCTGGCT+TGG | - | chr1.2:79391448-79391467 | None:intergenic | 40.0% |
! | AGTTCTAACTCCATTCTGGT+TGG | - | chr1.2:79393151-79393170 | None:intergenic | 40.0% |
! | CCATCAGTCTGAAATGTATC+TGG | - | chr1.2:79391453-79391472 | None:intergenic | 40.0% |
! | GAAGAGTATATGCCAGCTAA+TGG | + | chr1.2:79394054-79394073 | MS.gene060275:CDS | 40.0% |
! | GCTCTAGCATTTTTCGTAGT+TGG | + | chr1.2:79392947-79392966 | MS.gene060275:CDS | 40.0% |
! | TTCGAGTTCTAACTCCATTC+TGG | - | chr1.2:79393155-79393174 | None:intergenic | 40.0% |
! | TTGGAGTATCAGTATCCACA+AGG | - | chr1.2:79392655-79392674 | None:intergenic | 40.0% |
! | TTTTCACCTTTGCTGATACC+AGG | - | chr1.2:79394034-79394053 | None:intergenic | 40.0% |
! | TTTTGCAACCATCAGCTTAG+AGG | - | chr1.2:79393706-79393725 | None:intergenic | 40.0% |
!! | GAATTCCTCCTATTTCTGGA+TGG | - | chr1.2:79394562-79394581 | None:intergenic | 40.0% |
!! | GACTCAAAGCCATTTTCTTC+CGG | - | chr1.2:79393129-79393148 | None:intergenic | 40.0% |
AAGGTCGGGAACAACTAATC+CGG | + | chr1.2:79394258-79394277 | MS.gene060275:CDS | 45.0% | |
AAGTTGTTGCCTTCCGAGAA+AGG | + | chr1.2:79393393-79393412 | MS.gene060275:CDS | 45.0% | |
AATCCGGAATATGACACGGA+TGG | + | chr1.2:79394274-79394293 | MS.gene060275:CDS | 45.0% | |
ACACGAAACACTGCCTTTCT+CGG | - | chr1.2:79393409-79393428 | None:intergenic | 45.0% | |
ACCATTGGATGAGGAGCAAA+AGG | + | chr1.2:79393011-79393030 | MS.gene060275:CDS | 45.0% | |
ACCTGCACAATTACACGTGT+CGG | - | chr1.2:79394136-79394155 | None:intergenic | 45.0% | |
AGAAAGGCAGTGTTTCGTGT+AGG | + | chr1.2:79393409-79393428 | MS.gene060275:CDS | 45.0% | |
AGAGTAGAACCCTAGAATGG+TGG | - | chr1.2:79392344-79392363 | None:intergenic | 45.0% | |
AGCACTCCAGACATAGCTAA+AGG | + | chr1.2:79394199-79394218 | MS.gene060275:CDS | 45.0% | |
ATACCTTGCTGAAATCGCGA+AGG | + | chr1.2:79393737-79393756 | MS.gene060275:CDS | 45.0% | |
ATCAGATGCCTCTAAGCTGA+TGG | + | chr1.2:79393695-79393714 | MS.gene060275:CDS | 45.0% | |
CAGGTATGTTGCAAGTGAGT+TGG | + | chr1.2:79392437-79392456 | MS.gene060275:intron | 45.0% | |
CAGTGTTTCGTGTAGGTTCT+TGG | + | chr1.2:79393416-79393435 | MS.gene060275:CDS | 45.0% | |
CTACACCATCCAGAAATAGG+AGG | + | chr1.2:79394554-79394573 | MS.gene060275:CDS | 45.0% | |
CTGTAAAGGCCATCATGAGA+CGG | - | chr1.2:79393825-79393844 | None:intergenic | 45.0% | |
CTTGAAGGGATAAGAAAGCC+GGG | + | chr1.2:79393666-79393685 | MS.gene060275:CDS | 45.0% | |
CTTGATCTAGCCACCATTCT+AGG | + | chr1.2:79392331-79392350 | MS.gene060275:intron | 45.0% | |
GAGATTGAATTGGTTGGAGG+TGG | + | chr1.2:79393639-79393658 | MS.gene060275:CDS | 45.0% | |
GCATCGTTGAGACAAAGCAA+CGG | + | chr1.2:79394340-79394359 | MS.gene060275:CDS | 45.0% | |
GCTTTCTGCAATCCATTAGC+TGG | - | chr1.2:79394069-79394088 | None:intergenic | 45.0% | |
GGAATCAAAGACCTGAGCAT+TGG | + | chr1.2:79394220-79394239 | MS.gene060275:CDS | 45.0% | |
GGAGGACATGGAGAAAATAG+TGG | + | chr1.2:79394481-79394500 | MS.gene060275:CDS | 45.0% | |
GTCTCATGATGGCCTTTACA+GGG | + | chr1.2:79393824-79393843 | MS.gene060275:CDS | 45.0% | |
GTCTTTGTCACCATTGGATG+AGG | + | chr1.2:79393002-79393021 | MS.gene060275:CDS | 45.0% | |
TCCGAGATTGAATTGGTTGG+AGG | + | chr1.2:79393636-79393655 | MS.gene060275:CDS | 45.0% | |
TGCATGCAGTGCAAAATGAG+AGG | + | chr1.2:79394107-79394126 | MS.gene060275:CDS | 45.0% | |
TTGAAGGGATAAGAAAGCCG+GGG | + | chr1.2:79393667-79393686 | MS.gene060275:CDS | 45.0% | |
TTGAGACAAAGCAACGGAGT+TGG | + | chr1.2:79394346-79394365 | MS.gene060275:CDS | 45.0% | |
! | AAATGTGCCAAAGGACTGGT+GGG | + | chr1.2:79393173-79393192 | MS.gene060275:CDS | 45.0% |
! | ACCTTTTGCTCCTCATCCAA+TGG | - | chr1.2:79393015-79393034 | None:intergenic | 45.0% |
! | CTCATTTTGCACTGCATGCA+AGG | - | chr1.2:79394107-79394126 | None:intergenic | 45.0% |
! | GAGGCATCTGATAAAATCCC+CGG | - | chr1.2:79393687-79393706 | None:intergenic | 45.0% |
AAGCTATGGGCAAGCAAAGG+AGG | + | chr1.2:79394463-79394482 | MS.gene060275:CDS | 50.0% | |
AATATGACACGGATGGAGCG+GGG | + | chr1.2:79394281-79394300 | MS.gene060275:CDS | 50.0% | |
ACCGACACGTGTAATTGTGC+AGG | + | chr1.2:79394132-79394151 | MS.gene060275:CDS | 50.0% | |
ATCTCTCGTCCGTCTCATGA+TGG | + | chr1.2:79393813-79393832 | MS.gene060275:CDS | 50.0% | |
CGTCTCATGATGGCCTTTAC+AGG | + | chr1.2:79393823-79393842 | MS.gene060275:CDS | 50.0% | |
CTCGAAATGTGCCAAAGGAC+TGG | + | chr1.2:79393169-79393188 | MS.gene060275:CDS | 50.0% | |
GAAACACTGCCTTTCTCGGA+AGG | - | chr1.2:79393405-79393424 | None:intergenic | 50.0% | |
GAAATGTGCCAAAGGACTGG+TGG | + | chr1.2:79393172-79393191 | MS.gene060275:CDS | 50.0% | |
GAATATGACACGGATGGAGC+GGG | + | chr1.2:79394280-79394299 | MS.gene060275:CDS | 50.0% | |
GATCCTTCGCGATTTCAGCA+AGG | - | chr1.2:79393743-79393762 | None:intergenic | 50.0% | |
GCAACATACCTGCGCATGAA+AGG | - | chr1.2:79392429-79392448 | None:intergenic | 50.0% | |
GCAGGTACTACATTTCGAGC+AGG | + | chr1.2:79394150-79394169 | MS.gene060275:CDS | 50.0% | |
GCTCCATCCGTGTCATATTC+CGG | - | chr1.2:79394280-79394299 | None:intergenic | 50.0% | |
GCTTCGACACATCCTCACAT+GGG | - | chr1.2:79393347-79393366 | None:intergenic | 50.0% | |
GGAATATGACACGGATGGAG+CGG | + | chr1.2:79394279-79394298 | MS.gene060275:CDS | 50.0% | |
GGGGACAGCTGAGGAATTAA+AGG | + | chr1.2:79394300-79394319 | MS.gene060275:CDS | 50.0% | |
GTGAGGATGTGTCGAAGCAT+CGG | + | chr1.2:79393349-79393368 | MS.gene060275:CDS | 50.0% | |
TCAAGATGCCTTTCATGCGC+AGG | + | chr1.2:79392418-79392437 | MS.gene060275:intron | 50.0% | |
TCTTCAACCCACCAGTCCTT+TGG | - | chr1.2:79393183-79393202 | None:intergenic | 50.0% | |
TGCTTCGACACATCCTCACA+TGG | - | chr1.2:79393348-79393367 | None:intergenic | 50.0% | |
TTGGAGGTGGCGAACTTGAA+GGG | + | chr1.2:79393652-79393671 | MS.gene060275:CDS | 50.0% | |
! | AGGTGTGCAGCAGAGTATCT+TGG | + | chr1.2:79392868-79392887 | MS.gene060275:CDS | 50.0% |
! | CAAGGGTATGATCCCATGTG+AGG | + | chr1.2:79393332-79393351 | MS.gene060275:CDS | 50.0% |
!! | GGCTTTGAGTCCAACCAGAA+TGG | + | chr1.2:79393138-79393157 | MS.gene060275:CDS | 50.0% |
GAGCACCCTGGTATCAGCAA+AGG | + | chr1.2:79394025-79394044 | MS.gene060275:CDS | 55.0% | |
GTCCAACGGTAGCTCAAGGT+CGG | + | chr1.2:79394243-79394262 | MS.gene060275:CDS | 55.0% | |
GTTGGAGGTGGCGAACTTGA+AGG | + | chr1.2:79393651-79393670 | MS.gene060275:CDS | 55.0% | |
TACCGTTGGACCCAATGCTC+AGG | - | chr1.2:79394234-79394253 | None:intergenic | 55.0% | |
TCCAACGGTAGCTCAAGGTC+GGG | + | chr1.2:79394244-79394263 | MS.gene060275:CDS | 55.0% | |
TGGGCAAGCAAAGGAGGACA+TGG | + | chr1.2:79394469-79394488 | MS.gene060275:CDS | 55.0% | |
TTGGGTCCAACGGTAGCTCA+AGG | + | chr1.2:79394239-79394258 | MS.gene060275:CDS | 55.0% | |
!! | GAAACACTACAGGAGCACCC+TGG | + | chr1.2:79394013-79394032 | MS.gene060275:intron | 55.0% |
!! | GACCTGAGCATTGGGTCCAA+CGG | + | chr1.2:79394229-79394248 | MS.gene060275:CDS | 55.0% |
!! | TCAAAGGCACTTGCACCACC+AGG | - | chr1.2:79392784-79392803 | None:intergenic | 55.0% |
GCTAGTACCCGATGACGCAG+CGG | - | chr1.2:79394182-79394201 | None:intergenic | 60.0% | |
GGTCAGAACCGCTGCGTCAT+CGG | + | chr1.2:79394171-79394190 | MS.gene060275:CDS | 60.0% | |
GTCAGAACCGCTGCGTCATC+GGG | + | chr1.2:79394172-79394191 | MS.gene060275:CDS | 60.0% | |
TCCCGACCTTGAGCTACCGT+TGG | - | chr1.2:79394248-79394267 | None:intergenic | 60.0% | |
GGATGGAGCGGGGACAGCTG+AGG | + | chr1.2:79394291-79394310 | MS.gene060275:CDS | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr1.2 | gene | 79391423 | 79394591 | 79391423 | ID=MS.gene060275 |
chr1.2 | mRNA | 79391423 | 79394591 | 79391423 | ID=MS.gene060275.t1;Parent=MS.gene060275 |
chr1.2 | exon | 79391423 | 79391487 | 79391423 | ID=MS.gene060275.t1.exon1;Parent=MS.gene060275.t1 |
chr1.2 | CDS | 79391423 | 79391487 | 79391423 | ID=cds.MS.gene060275.t1;Parent=MS.gene060275.t1 |
chr1.2 | exon | 79392440 | 79392509 | 79392440 | ID=MS.gene060275.t1.exon2;Parent=MS.gene060275.t1 |
chr1.2 | CDS | 79392440 | 79392509 | 79392440 | ID=cds.MS.gene060275.t1;Parent=MS.gene060275.t1 |
chr1.2 | exon | 79392691 | 79393866 | 79392691 | ID=MS.gene060275.t1.exon3;Parent=MS.gene060275.t1 |
chr1.2 | CDS | 79392691 | 79393866 | 79392691 | ID=cds.MS.gene060275.t1;Parent=MS.gene060275.t1 |
chr1.2 | exon | 79394025 | 79394591 | 79394025 | ID=MS.gene060275.t1.exon4;Parent=MS.gene060275.t1 |
chr1.2 | CDS | 79394025 | 79394591 | 79394025 | ID=cds.MS.gene060275.t1;Parent=MS.gene060275.t1 |
Gene Sequence |
Protein sequence |