Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene71625.t1 | XP_003592479.1 | 98.6 | 625 | 9 | 0 | 1 | 625 | 1 | 625 | 0.00E+00 | 1201.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene71625.t1 | O80970 | 58.8 | 646 | 233 | 11 | 1 | 625 | 1 | 634 | 2.4e-198 | 693.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene71625.t1 | G7IE60 | 98.6 | 625 | 9 | 0 | 1 | 625 | 1 | 625 | 0.0e+00 | 1201.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene053173 | MS.gene71625 | 0.808603 | 2.86E-50 | -1.69E-46 |
| MS.gene054633 | MS.gene71625 | 0.804089 | 2.55E-49 | -1.69E-46 |
| MS.gene05640 | MS.gene71625 | 0.808065 | 3.72E-50 | -1.69E-46 |
| MS.gene060275 | MS.gene71625 | 0.973133 | 6.48E-136 | -1.69E-46 |
| MS.gene06093 | MS.gene71625 | 0.836691 | 8.07E-57 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene71625 | MS.gene071612 | PPI |
| MS.gene03028 | MS.gene71625 | PPI |
| MS.gene71625 | MS.gene005626 | PPI |
| MS.gene71625 | MS.gene07138 | PPI |
| MS.gene71625 | MS.gene07620 | PPI |
| MS.gene71625 | MS.gene051487 | PPI |
| MS.gene71625 | MS.gene23003 | PPI |
| MS.gene71625 | MS.gene20706 | PPI |
| MS.gene71625 | MS.gene07622 | PPI |
| MS.gene07618 | MS.gene71625 | PPI |
| MS.gene71625 | MS.gene058484 | PPI |
| MS.gene71625 | MS.gene07187 | PPI |
| MS.gene71625 | MS.gene016088 | PPI |
| MS.gene71625 | MS.gene33115 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene71625.t1 | MTR_1g106430 | 98.560 | 625 | 9 | 0 | 1 | 625 | 1 | 625 | 0.0 | 1261 |
| MS.gene71625.t1 | MTR_5g015790 | 62.323 | 637 | 221 | 9 | 1 | 625 | 1 | 630 | 0.0 | 748 |
| MS.gene71625.t1 | MTR_1g014070 | 55.397 | 491 | 211 | 6 | 1 | 487 | 1 | 487 | 0.0 | 537 |
| MS.gene71625.t1 | MTR_5g032780 | 43.358 | 542 | 267 | 7 | 1 | 507 | 1 | 537 | 3.99e-145 | 435 |
| MS.gene71625.t1 | MTR_8g069330 | 45.936 | 529 | 237 | 10 | 1 | 507 | 1 | 502 | 3.75e-137 | 413 |
| MS.gene71625.t1 | MTR_4g134210 | 37.097 | 558 | 307 | 9 | 1 | 541 | 1 | 531 | 1.22e-122 | 376 |
| MS.gene71625.t1 | MTR_2g009340 | 37.255 | 612 | 316 | 16 | 5 | 559 | 23 | 623 | 1.62e-121 | 375 |
| MS.gene71625.t1 | MTR_4g093850 | 37.828 | 534 | 285 | 8 | 5 | 497 | 23 | 550 | 1.90e-119 | 370 |
| MS.gene71625.t1 | MTR_2g027410 | 36.811 | 508 | 274 | 7 | 1 | 496 | 1 | 473 | 3.50e-113 | 350 |
| MS.gene71625.t1 | MTR_2g018750 | 34.345 | 626 | 360 | 13 | 1 | 608 | 1 | 593 | 1.88e-108 | 339 |
| MS.gene71625.t1 | MTR_1g064360 | 35.263 | 570 | 312 | 14 | 1 | 546 | 1 | 537 | 3.19e-105 | 330 |
| MS.gene71625.t1 | MTR_5g016060 | 39.024 | 492 | 260 | 13 | 25 | 499 | 37 | 505 | 7.80e-105 | 330 |
| MS.gene71625.t1 | MTR_2g084595 | 34.622 | 543 | 311 | 10 | 13 | 528 | 10 | 535 | 9.01e-98 | 312 |
| MS.gene71625.t1 | MTR_8g090220 | 32.258 | 589 | 283 | 16 | 18 | 552 | 42 | 568 | 6.03e-97 | 310 |
| MS.gene71625.t1 | MTR_8g090220 | 33.925 | 507 | 248 | 12 | 18 | 481 | 42 | 504 | 2.49e-96 | 305 |
| MS.gene71625.t1 | MTR_4g022330 | 35.581 | 534 | 318 | 10 | 23 | 546 | 29 | 546 | 6.55e-96 | 307 |
| MS.gene71625.t1 | MTR_1g094850 | 36.614 | 508 | 296 | 13 | 1 | 492 | 1 | 498 | 4.56e-95 | 305 |
| MS.gene71625.t1 | MTR_4g095430 | 36.660 | 491 | 280 | 9 | 25 | 499 | 10 | 485 | 7.20e-95 | 303 |
| MS.gene71625.t1 | MTR_2g027410 | 36.636 | 434 | 230 | 6 | 75 | 496 | 1 | 401 | 1.45e-93 | 297 |
| MS.gene71625.t1 | MTR_4g093850 | 35.950 | 484 | 263 | 8 | 5 | 447 | 23 | 500 | 2.77e-93 | 297 |
| MS.gene71625.t1 | MTR_1g088885 | 35.185 | 540 | 303 | 11 | 26 | 549 | 34 | 542 | 2.97e-93 | 300 |
| MS.gene71625.t1 | MTR_8g078900 | 36.542 | 509 | 271 | 13 | 23 | 488 | 15 | 514 | 4.75e-92 | 298 |
| MS.gene71625.t1 | MTR_2g048390 | 38.043 | 460 | 254 | 8 | 1 | 437 | 1 | 452 | 1.63e-90 | 288 |
| MS.gene71625.t1 | MTR_7g108290 | 35.009 | 537 | 319 | 11 | 26 | 546 | 34 | 556 | 8.35e-88 | 287 |
| MS.gene71625.t1 | MTR_8g078900 | 36.660 | 491 | 259 | 13 | 41 | 488 | 3 | 484 | 2.19e-87 | 285 |
| MS.gene71625.t1 | MTR_7g073980 | 35.081 | 496 | 285 | 11 | 18 | 496 | 23 | 498 | 1.51e-84 | 278 |
| MS.gene71625.t1 | MTR_8g078900 | 37.104 | 442 | 246 | 11 | 70 | 488 | 42 | 474 | 2.58e-82 | 271 |
| MS.gene71625.t1 | MTR_3g062540 | 34.440 | 482 | 266 | 10 | 25 | 493 | 21 | 465 | 7.00e-82 | 269 |
| MS.gene71625.t1 | MTR_5g075640 | 32.193 | 497 | 280 | 8 | 25 | 499 | 22 | 483 | 3.59e-79 | 262 |
| MS.gene71625.t1 | MTR_1g082690 | 28.909 | 550 | 311 | 11 | 11 | 546 | 43 | 526 | 8.97e-79 | 260 |
| MS.gene71625.t1 | MTR_2g084595 | 33.556 | 450 | 260 | 8 | 13 | 437 | 10 | 445 | 1.26e-75 | 248 |
| MS.gene71625.t1 | MTR_5g016060 | 38.107 | 412 | 215 | 13 | 105 | 499 | 3 | 391 | 2.19e-74 | 247 |
| MS.gene71625.t1 | MTR_3g062540 | 33.987 | 459 | 253 | 10 | 48 | 493 | 2 | 423 | 3.33e-73 | 244 |
| MS.gene71625.t1 | MTR_5g075640 | 31.435 | 474 | 268 | 8 | 48 | 499 | 2 | 440 | 2.87e-70 | 237 |
| MS.gene71625.t1 | MTR_8g078900 | 34.498 | 458 | 248 | 13 | 23 | 437 | 15 | 463 | 1.09e-68 | 231 |
| MS.gene71625.t1 | MTR_2g102730 | 39.617 | 313 | 152 | 6 | 213 | 506 | 24 | 318 | 1.13e-59 | 206 |
| MS.gene71625.t1 | MTR_8g078900 | 34.783 | 391 | 223 | 11 | 70 | 437 | 42 | 423 | 2.92e-59 | 204 |
| MS.gene71625.t1 | MTR_4g011530 | 33.659 | 410 | 229 | 9 | 207 | 605 | 40 | 417 | 1.30e-57 | 201 |
| MS.gene71625.t1 | MTR_4g045767 | 28.256 | 453 | 286 | 13 | 74 | 518 | 52 | 473 | 7.98e-41 | 156 |
| MS.gene71625.t1 | MTR_4g074190 | 26.680 | 491 | 311 | 14 | 29 | 493 | 4 | 471 | 4.46e-40 | 154 |
| MS.gene71625.t1 | MTR_4g074190 | 26.517 | 445 | 284 | 11 | 70 | 493 | 3 | 425 | 3.57e-38 | 148 |
| MS.gene71625.t1 | MTR_1g035720 | 27.291 | 491 | 283 | 17 | 31 | 486 | 6 | 457 | 3.59e-37 | 145 |
| MS.gene71625.t1 | MTR_4g074190 | 26.437 | 435 | 271 | 14 | 29 | 437 | 4 | 415 | 1.61e-31 | 128 |
| MS.gene71625.t1 | MTR_2g010890 | 27.907 | 387 | 242 | 12 | 96 | 475 | 3 | 359 | 1.64e-28 | 119 |
| MS.gene71625.t1 | MTR_1g105870 | 29.500 | 200 | 123 | 3 | 32 | 229 | 35 | 218 | 4.59e-23 | 99.8 |
| MS.gene71625.t1 | MTR_2g048375 | 49.254 | 67 | 32 | 1 | 454 | 518 | 1 | 67 | 8.44e-11 | 61.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene71625.t1 | AT2G14820 | 61.551 | 593 | 207 | 8 | 1 | 584 | 1 | 581 | 0.0 | 726 |
| MS.gene71625.t1 | AT2G14820 | 61.551 | 593 | 207 | 8 | 1 | 584 | 1 | 581 | 0.0 | 726 |
| MS.gene71625.t1 | AT4G37590 | 50.327 | 612 | 227 | 14 | 1 | 594 | 1 | 553 | 0.0 | 553 |
| MS.gene71625.t1 | AT5G67440 | 49.758 | 619 | 243 | 14 | 1 | 608 | 1 | 562 | 0.0 | 537 |
| MS.gene71625.t1 | AT5G67440 | 49.758 | 619 | 243 | 14 | 1 | 608 | 1 | 562 | 0.0 | 537 |
| MS.gene71625.t1 | AT2G23050 | 56.426 | 498 | 169 | 9 | 1 | 493 | 1 | 455 | 0.0 | 526 |
| MS.gene71625.t1 | AT4G31820 | 50.101 | 495 | 221 | 7 | 1 | 492 | 1 | 472 | 4.89e-162 | 476 |
| MS.gene71625.t1 | AT5G67440 | 48.180 | 577 | 232 | 13 | 43 | 608 | 5 | 525 | 2.63e-161 | 473 |
| MS.gene71625.t1 | AT1G67900 | 40.694 | 634 | 312 | 16 | 1 | 585 | 1 | 619 | 1.61e-137 | 415 |
| MS.gene71625.t1 | AT1G67900 | 40.694 | 634 | 312 | 16 | 1 | 585 | 1 | 619 | 1.61e-137 | 415 |
| MS.gene71625.t1 | AT1G67900 | 40.694 | 634 | 312 | 16 | 1 | 585 | 1 | 619 | 1.61e-137 | 415 |
| MS.gene71625.t1 | AT1G67900 | 40.694 | 634 | 312 | 16 | 1 | 585 | 1 | 619 | 1.61e-137 | 415 |
| MS.gene71625.t1 | AT1G67900 | 40.694 | 634 | 312 | 16 | 1 | 585 | 1 | 619 | 1.61e-137 | 415 |
| MS.gene71625.t1 | AT1G67900 | 40.694 | 634 | 312 | 16 | 1 | 585 | 1 | 619 | 1.61e-137 | 415 |
| MS.gene71625.t1 | AT4G31820 | 48.655 | 446 | 204 | 6 | 55 | 497 | 1 | 424 | 2.29e-136 | 409 |
| MS.gene71625.t1 | AT2G23050 | 53.018 | 381 | 137 | 6 | 113 | 493 | 1 | 339 | 2.06e-126 | 377 |
| MS.gene71625.t1 | AT3G26490 | 40.421 | 522 | 272 | 9 | 1 | 493 | 1 | 512 | 7.47e-122 | 374 |
| MS.gene71625.t1 | AT3G26490 | 40.421 | 522 | 272 | 9 | 1 | 493 | 1 | 512 | 7.47e-122 | 374 |
| MS.gene71625.t1 | AT3G26490 | 40.421 | 522 | 272 | 9 | 1 | 493 | 1 | 512 | 7.47e-122 | 374 |
| MS.gene71625.t1 | AT5G47800 | 39.034 | 497 | 269 | 8 | 1 | 486 | 1 | 474 | 3.08e-121 | 371 |
| MS.gene71625.t1 | AT5G47800 | 39.034 | 497 | 269 | 8 | 1 | 486 | 1 | 474 | 3.08e-121 | 371 |
| MS.gene71625.t1 | AT5G47800 | 39.034 | 497 | 269 | 8 | 1 | 486 | 1 | 474 | 3.08e-121 | 371 |
| MS.gene71625.t1 | AT5G47800 | 39.034 | 497 | 269 | 8 | 1 | 486 | 114 | 587 | 1.92e-119 | 370 |
| MS.gene71625.t1 | AT5G03250 | 36.411 | 574 | 318 | 15 | 1 | 547 | 1 | 554 | 7.87e-109 | 340 |
| MS.gene71625.t1 | AT5G13600 | 38.327 | 514 | 278 | 15 | 1 | 492 | 1 | 497 | 7.13e-106 | 332 |
| MS.gene71625.t1 | AT1G30440 | 37.931 | 522 | 284 | 12 | 1 | 492 | 1 | 512 | 1.70e-104 | 331 |
| MS.gene71625.t1 | AT3G26490 | 39.056 | 466 | 245 | 9 | 1 | 437 | 1 | 456 | 1.64e-99 | 313 |
| MS.gene71625.t1 | AT5G67385 | 37.728 | 493 | 275 | 10 | 7 | 488 | 3 | 474 | 9.04e-98 | 311 |
| MS.gene71625.t1 | AT3G44820 | 34.489 | 519 | 302 | 9 | 8 | 494 | 5 | 517 | 1.48e-94 | 304 |
| MS.gene71625.t1 | AT1G03010 | 36.170 | 564 | 303 | 15 | 18 | 546 | 22 | 563 | 2.12e-93 | 301 |
| MS.gene71625.t1 | AT1G03010 | 36.594 | 552 | 297 | 14 | 26 | 546 | 7 | 536 | 2.48e-93 | 300 |
| MS.gene71625.t1 | AT1G03010 | 36.511 | 556 | 300 | 14 | 22 | 546 | 29 | 562 | 2.78e-93 | 300 |
| MS.gene71625.t1 | AT5G48800 | 34.522 | 533 | 315 | 9 | 23 | 546 | 36 | 543 | 9.58e-93 | 298 |
| MS.gene71625.t1 | AT5G66560 | 33.511 | 564 | 285 | 14 | 23 | 509 | 14 | 564 | 1.17e-88 | 289 |
| MS.gene71625.t1 | AT2G47860 | 33.877 | 552 | 309 | 12 | 22 | 546 | 31 | 553 | 2.52e-88 | 288 |
| MS.gene71625.t1 | AT5G10250 | 34.585 | 506 | 247 | 12 | 23 | 488 | 45 | 506 | 6.59e-88 | 286 |
| MS.gene71625.t1 | AT5G67385 | 38.000 | 450 | 248 | 9 | 49 | 488 | 1 | 429 | 3.02e-87 | 283 |
| MS.gene71625.t1 | AT5G67385 | 38.000 | 450 | 248 | 9 | 49 | 488 | 1 | 429 | 3.02e-87 | 283 |
| MS.gene71625.t1 | AT5G67385 | 38.000 | 450 | 248 | 9 | 49 | 488 | 1 | 429 | 3.02e-87 | 283 |
| MS.gene71625.t1 | AT5G67385 | 38.000 | 450 | 248 | 9 | 49 | 488 | 1 | 429 | 3.02e-87 | 283 |
| MS.gene71625.t1 | AT3G08660 | 36.089 | 496 | 269 | 14 | 8 | 496 | 21 | 475 | 8.28e-87 | 282 |
| MS.gene71625.t1 | AT5G66560 | 33.700 | 546 | 272 | 14 | 41 | 509 | 3 | 535 | 2.39e-85 | 280 |
| MS.gene71625.t1 | AT5G10250 | 34.190 | 506 | 256 | 12 | 23 | 499 | 45 | 502 | 8.33e-85 | 278 |
| MS.gene71625.t1 | AT2G30520 | 34.100 | 478 | 266 | 10 | 25 | 488 | 27 | 469 | 9.30e-84 | 274 |
| MS.gene71625.t1 | AT5G66560 | 35.654 | 474 | 259 | 12 | 69 | 509 | 65 | 525 | 1.27e-83 | 275 |
| MS.gene71625.t1 | AT2G47860 | 32.522 | 575 | 309 | 13 | 22 | 546 | 31 | 576 | 3.61e-83 | 275 |
| MS.gene71625.t1 | AT3G08570 | 34.304 | 481 | 280 | 10 | 24 | 488 | 30 | 490 | 3.66e-82 | 271 |
| MS.gene71625.t1 | AT3G49970 | 38.549 | 441 | 210 | 12 | 41 | 473 | 7 | 394 | 4.94e-81 | 265 |
| MS.gene71625.t1 | AT3G49970 | 38.549 | 441 | 210 | 12 | 41 | 473 | 7 | 394 | 4.94e-81 | 265 |
| MS.gene71625.t1 | AT3G50840 | 34.845 | 485 | 261 | 10 | 23 | 488 | 11 | 459 | 6.36e-78 | 258 |
| MS.gene71625.t1 | AT3G08660 | 36.636 | 434 | 235 | 12 | 70 | 496 | 15 | 415 | 9.41e-77 | 254 |
| MS.gene71625.t1 | AT2G30520 | 34.066 | 455 | 251 | 10 | 48 | 488 | 2 | 421 | 1.08e-75 | 252 |
| MS.gene71625.t1 | AT2G30520 | 34.066 | 455 | 251 | 10 | 48 | 488 | 2 | 421 | 1.08e-75 | 252 |
| MS.gene71625.t1 | AT5G03250 | 34.573 | 457 | 262 | 12 | 113 | 547 | 1 | 442 | 4.77e-71 | 238 |
| MS.gene71625.t1 | AT3G50840 | 34.205 | 459 | 247 | 10 | 49 | 488 | 1 | 423 | 3.65e-68 | 231 |
| MS.gene71625.t1 | AT3G50840 | 34.205 | 459 | 247 | 10 | 49 | 488 | 1 | 423 | 3.65e-68 | 231 |
| MS.gene71625.t1 | AT2G47860 | 33.864 | 440 | 240 | 10 | 22 | 437 | 31 | 443 | 1.05e-67 | 228 |
| MS.gene71625.t1 | AT3G08660 | 34.633 | 436 | 238 | 13 | 8 | 437 | 21 | 415 | 2.59e-66 | 223 |
| MS.gene71625.t1 | AT5G66560 | 32.568 | 479 | 246 | 13 | 23 | 437 | 14 | 479 | 6.58e-65 | 221 |
| MS.gene71625.t1 | AT2G47860 | 32.181 | 463 | 240 | 11 | 22 | 437 | 31 | 466 | 1.20e-62 | 215 |
| MS.gene71625.t1 | AT2G47860 | 32.755 | 461 | 257 | 11 | 113 | 546 | 1 | 435 | 5.66e-59 | 206 |
| MS.gene71625.t1 | AT2G47860 | 32.755 | 461 | 257 | 11 | 113 | 546 | 1 | 435 | 5.66e-59 | 206 |
| MS.gene71625.t1 | AT5G64330 | 38.376 | 271 | 145 | 4 | 7 | 260 | 33 | 298 | 2.29e-56 | 202 |
| MS.gene71625.t1 | AT5G64330 | 41.772 | 237 | 115 | 4 | 271 | 488 | 373 | 605 | 8.14e-51 | 187 |
| MS.gene71625.t1 | AT5G64330 | 38.376 | 271 | 145 | 4 | 7 | 260 | 33 | 298 | 6.56e-56 | 202 |
| MS.gene71625.t1 | AT5G64330 | 41.772 | 237 | 115 | 4 | 271 | 488 | 373 | 605 | 8.91e-51 | 188 |
| MS.gene71625.t1 | AT1G52770 | 37.458 | 299 | 151 | 4 | 213 | 493 | 28 | 308 | 8.35e-54 | 191 |
| MS.gene71625.t1 | AT5G64330 | 42.308 | 234 | 118 | 3 | 271 | 488 | 314 | 546 | 2.31e-51 | 187 |
| MS.gene71625.t1 | AT5G64330 | 37.344 | 241 | 130 | 4 | 38 | 260 | 2 | 239 | 9.05e-46 | 171 |
| MS.gene71625.t1 | AT5G48130 | 26.210 | 599 | 376 | 18 | 28 | 608 | 39 | 589 | 2.18e-48 | 179 |
| MS.gene71625.t1 | AT3G15570 | 35.235 | 298 | 153 | 4 | 213 | 488 | 29 | 308 | 4.27e-48 | 175 |
| MS.gene71625.t1 | AT5G17580 | 27.254 | 488 | 312 | 14 | 11 | 488 | 3 | 457 | 4.47e-42 | 160 |
| MS.gene71625.t1 | AT5G17580 | 27.368 | 475 | 302 | 14 | 24 | 488 | 1 | 442 | 1.43e-40 | 155 |
| MS.gene71625.t1 | AT3G19850 | 26.484 | 438 | 277 | 11 | 70 | 487 | 52 | 464 | 3.09e-40 | 155 |
| MS.gene71625.t1 | AT3G03510 | 27.404 | 416 | 235 | 12 | 80 | 488 | 6 | 361 | 3.81e-35 | 139 |
| MS.gene71625.t1 | AT1G50280 | 25.895 | 475 | 296 | 15 | 37 | 482 | 13 | 460 | 2.51e-33 | 134 |
| MS.gene71625.t1 | AT1G50280 | 26.364 | 440 | 273 | 14 | 67 | 482 | 15 | 427 | 9.29e-33 | 132 |
| MS.gene71625.t1 | AT3G22104 | 24.615 | 455 | 294 | 12 | 29 | 473 | 5 | 420 | 6.88e-31 | 127 |
| MS.gene71625.t1 | AT3G22104 | 23.499 | 383 | 243 | 9 | 100 | 473 | 4 | 345 | 2.50e-22 | 100 |
| MS.gene71625.t1 | AT3G22104 | 23.499 | 383 | 243 | 9 | 100 | 473 | 4 | 345 | 2.50e-22 | 100 |
| MS.gene71625.t1 | AT3G22104 | 23.499 | 383 | 243 | 9 | 100 | 473 | 4 | 345 | 2.50e-22 | 100 |
| MS.gene71625.t1 | AT3G49900 | 27.682 | 289 | 157 | 12 | 279 | 547 | 126 | 382 | 4.58e-14 | 75.5 |
| MS.gene71625.t1 | AT3G49900 | 27.397 | 292 | 157 | 13 | 279 | 547 | 126 | 385 | 2.61e-12 | 70.1 |
Find 134 sgRNAs with CRISPR-Local
Find 204 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AACTGAATTCCTCCTATTTC+TGG | 0.150173 | 1.4:-82349457 | None:intergenic |
| ATCATACCCTTGCTGAAATT+TGG | 0.196113 | 1.4:-82348215 | None:intergenic |
| CGTCTCATGATGGCCTTTAC+AGG | 0.230035 | 1.4:+82348717 | MS.gene71625:CDS |
| GGTGTAGATTTAACTTCTTC+AGG | 0.238087 | 1.4:-82349432 | None:intergenic |
| AAATCTGACAATGGTAAATT+AGG | 0.245080 | 1.4:-82348656 | None:intergenic |
| AACATGGATAAGGCTGTTAT+TGG | 0.275085 | 1.4:+82349294 | MS.gene71625:CDS |
| ATTCAATCTAACGATGTAAT+TGG | 0.286357 | 1.4:+82348158 | MS.gene71625:CDS |
| TTCGAGTTCTAACTCCATTC+TGG | 0.292794 | 1.4:-82348046 | None:intergenic |
| TTGATTCCTTTAGCTATGTC+TGG | 0.324835 | 1.4:-82349099 | None:intergenic |
| CAGTGTTTCGTGTAGGTTCT+TGG | 0.339564 | 1.4:+82348310 | MS.gene71625:CDS |
| TCTGTAAGCATAAGCTTTCA+AGG | 0.351574 | 1.4:-82348186 | None:intergenic |
| AATCTACACCATCCAGAAAT+AGG | 0.361267 | 1.4:+82349445 | MS.gene71625:CDS |
| CCATCAGTCTGAAATGTATC+TGG | 0.381210 | 1.4:-82346344 | None:intergenic |
| ATAACAGCCTTATCCATGTT+TGG | 0.388738 | 1.4:-82349291 | None:intergenic |
| GGGGACAGCTGAGGAATTAA+AGG | 0.396543 | 1.4:+82349194 | MS.gene71625:CDS |
| GCACCATCCGTGTCATATTC+CGG | 0.403601 | 1.4:-82349171 | None:intergenic |
| ATCGTTAGATTGAATTTCCT+TGG | 0.406677 | 1.4:-82348150 | None:intergenic |
| GAAGAGTATATGCCAGCTAA+TGG | 0.411454 | 1.4:+82348948 | MS.gene71625:CDS |
| TCACAATTCCGAGATTGAAT+TGG | 0.413050 | 1.4:+82348523 | MS.gene71625:CDS |
| TGTAGTCTGAAGAAGGATAA+TGG | 0.416115 | 1.4:-82347871 | None:intergenic |
| ACACGAAACACTGCCTTTCT+CGG | 0.422062 | 1.4:-82348300 | None:intergenic |
| TCTTCAACCCACCAGTCCTT+TGG | 0.426430 | 1.4:-82348074 | None:intergenic |
| AAACATCGATCTTGAAAAGA+AGG | 0.427976 | 1.4:-82347812 | None:intergenic |
| GTCAGAACCGCTGCGTCATC+GGG | 0.436682 | 1.4:+82349066 | MS.gene71625:CDS |
| GGTCAGAACCGCTGCGTCAT+CGG | 0.438094 | 1.4:+82349065 | MS.gene71625:CDS |
| CTGATGGGAACAACAATGTT+AGG | 0.441088 | 1.4:+82346360 | MS.gene71625:CDS |
| AAGATGAAGTTTATGAAACT+TGG | 0.441776 | 1.4:+82346314 | None:intergenic |
| GAATCAAAGACCTGAGCATT+GGG | 0.443547 | 1.4:+82349115 | MS.gene71625:CDS |
| CAGATATTATTGTCAGCATA+GGG | 0.447255 | 1.4:+82347357 | MS.gene71625:CDS |
| AGAAGTCTTTCATTAAGCTA+TGG | 0.447436 | 1.4:+82349343 | MS.gene71625:CDS |
| TACAAAGTCTTTGTCACCAT+TGG | 0.450362 | 1.4:+82347890 | MS.gene71625:CDS |
| GAAGTCTTTCATTAAGCTAT+GGG | 0.452509 | 1.4:+82349344 | MS.gene71625:CDS |
| GTTGAAAACAGTTTCAAAGA+TGG | 0.459166 | 1.4:+82349258 | MS.gene71625:CDS |
| AATCACATTGTAAGCATTGA+GGG | 0.462223 | 1.4:-82347733 | None:intergenic |
| ATTCAAATTTCAGACATTCC+TGG | 0.463677 | 1.4:+82347657 | MS.gene71625:CDS |
| GATGTGCTAGTAAAGAGAAT+TGG | 0.464303 | 1.4:+82348383 | MS.gene71625:CDS |
| AAGTTGTTGCCTTCCGAGAA+AGG | 0.469404 | 1.4:+82348287 | MS.gene71625:CDS |
| CTTACAATGTGATTGCTACT+AGG | 0.469814 | 1.4:+82347742 | MS.gene71625:CDS |
| GTGTAGATTTAACTTCTTCA+GGG | 0.472605 | 1.4:-82349431 | None:intergenic |
| GAGAATTGGTCAGCAATTAG+AGG | 0.476150 | 1.4:+82348397 | MS.gene71625:CDS |
| ACCATTGGATGAGGAGCAAA+AGG | 0.477736 | 1.4:+82347905 | MS.gene71625:CDS |
| TACATTGTAATCTCTCCATC+TGG | 0.481738 | 1.4:-82348452 | None:intergenic |
| GTATAGTACAGAAAATTGTA+AGG | 0.482058 | 1.4:+82348483 | MS.gene71625:CDS |
| GTCTTTGTCACCATTGGATG+AGG | 0.486439 | 1.4:+82347896 | MS.gene71625:CDS |
| TTTCACCTTTGCTGATACCA+GGG | 0.486873 | 1.4:-82348924 | None:intergenic |
| TGCTAAACCAAACATGGATA+AGG | 0.489081 | 1.4:+82349284 | MS.gene71625:CDS |
| CCAGATACATTTCAGACTGA+TGG | 0.490097 | 1.4:+82346344 | MS.gene71625:CDS |
| GAATATGACACGGATGGTGC+GGG | 0.491251 | 1.4:+82349174 | MS.gene71625:CDS |
| ATGGTTGCAAAACTCATAGA+TGG | 0.492757 | 1.4:+82348608 | MS.gene71625:CDS |
| GCTTTCTGCAATCCATTAGC+TGG | 0.493502 | 1.4:-82348960 | None:intergenic |
| CTCGAAATGTGCCAAAGGAC+TGG | 0.494491 | 1.4:+82348063 | MS.gene71625:CDS |
| GGCTATTGACACATATTTGA+AGG | 0.499410 | 1.4:+82348739 | MS.gene71625:CDS |
| GGAATCAAAGACCTGAGCAT+TGG | 0.502284 | 1.4:+82349114 | MS.gene71625:CDS |
| GAGATTGAATTGGTTGGAGG+TGG | 0.502864 | 1.4:+82348533 | MS.gene71625:CDS |
| TCAGATTCATCTGAGAGTAT+TGG | 0.503452 | 1.4:+82349399 | MS.gene71625:CDS |
| AGTCTGAAATGTATCTGGCT+TGG | 0.503488 | 1.4:-82346339 | None:intergenic |
| AATTCCGAGATTGAATTGGT+TGG | 0.507004 | 1.4:+82348527 | MS.gene71625:CDS |
| AGGTGTGCAGCAGAGTATCT+TGG | 0.508603 | 1.4:+82347762 | MS.gene71625:CDS |
| ATGCATGAAAACATTGAGAA+AGG | 0.510465 | 1.4:+82347786 | MS.gene71625:CDS |
| TCCGAGATTGAATTGGTTGG+AGG | 0.510666 | 1.4:+82348530 | MS.gene71625:CDS |
| GTTGGAGGTGGCGAACTTGA+AGG | 0.511286 | 1.4:+82348545 | MS.gene71625:CDS |
| TCCCGACCTTGAGCTACCGT+TGG | 0.511760 | 1.4:-82349139 | None:intergenic |
| TCAGATATTATTGTCAGCAT+AGG | 0.515648 | 1.4:+82347356 | MS.gene71625:CDS |
| ATCAGATGCCTCTAAGCTGA+TGG | 0.515822 | 1.4:+82348589 | MS.gene71625:CDS |
| AGTTCTAACTCCATTCTGGT+TGG | 0.516845 | 1.4:-82348042 | None:intergenic |
| CATTGAATCTATAGCAAACA+AGG | 0.517035 | 1.4:+82347941 | MS.gene71625:CDS |
| ATGTGTCAATAGCCCTGTAA+AGG | 0.517885 | 1.4:-82348730 | None:intergenic |
| GGAATTAAAGGCATTAAGAA+AGG | 0.526651 | 1.4:+82349206 | MS.gene71625:CDS |
| GGCTTTGAGTCCAACCAGAA+TGG | 0.526969 | 1.4:+82348032 | MS.gene71625:CDS |
| TACCGTTGGACCCAATGCTC+AGG | 0.527764 | 1.4:-82349125 | None:intergenic |
| CTTGAAGGGATAAGAAAGCC+GGG | 0.528275 | 1.4:+82348560 | MS.gene71625:CDS |
| ATCTCTCGTCCGTCTCATGA+TGG | 0.528536 | 1.4:+82348707 | MS.gene71625:CDS |
| AAGGTCGGGAACAACTAATC+CGG | 0.530475 | 1.4:+82349152 | MS.gene71625:CDS |
| TCCAACGGTAGCTCAAGGTC+GGG | 0.534974 | 1.4:+82349138 | MS.gene71625:CDS |
| GAGGCATCTGATAAAATCCC+CGG | 0.536394 | 1.4:-82348578 | None:intergenic |
| TCGATGTTTCTAAAGTTGAC+TGG | 0.539514 | 1.4:+82347970 | MS.gene71625:CDS |
| ACCTCCAACCAATTCAATCT+CGG | 0.540022 | 1.4:-82348531 | None:intergenic |
| CAATCACATTGTAAGCATTG+AGG | 0.552608 | 1.4:-82347734 | None:intergenic |
| ACTTGAAGGGATAAGAAAGC+CGG | 0.555989 | 1.4:+82348559 | MS.gene71625:CDS |
| AAGACTTTGTAGTCTGAAGA+AGG | 0.556254 | 1.4:-82347878 | None:intergenic |
| GACCTGAGCATTGGGTCCAA+CGG | 0.556700 | 1.4:+82349123 | MS.gene71625:CDS |
| TTGGAGGTGGCGAACTTGAA+GGG | 0.557828 | 1.4:+82348546 | MS.gene71625:CDS |
| TGCTTCGACACATCCTCACA+TGG | 0.560000 | 1.4:-82348239 | None:intergenic |
| CAGGTATGTTGCAAGTGAGT+TGG | 0.560221 | 1.4:+82347331 | MS.gene71625:intron |
| GGAGGACATGGAGAAAATAG+TGG | 0.561699 | 1.4:+82349375 | MS.gene71625:CDS |
| GTCCAACGGTAGCTCAAGGT+CGG | 0.564380 | 1.4:+82349137 | MS.gene71625:CDS |
| AAGCTATGGGCAAGCAAAGG+AGG | 0.564447 | 1.4:+82349357 | MS.gene71625:CDS |
| GTGAGGATGTGTCGAAGCAT+CGG | 0.570340 | 1.4:+82348243 | MS.gene71625:CDS |
| ACCGACACGTGTAATTGTGC+AGG | 0.570689 | 1.4:+82349026 | MS.gene71625:CDS |
| GAGATTACAATGTATGATGT+TGG | 0.570865 | 1.4:+82348461 | MS.gene71625:CDS |
| GAATTCCTCCTATTTCTGGA+TGG | 0.571158 | 1.4:-82349453 | None:intergenic |
| CAGATACATTTCAGACTGAT+GGG | 0.573177 | 1.4:+82346345 | MS.gene71625:CDS |
| GAAACACTGCCTTTCTCGGA+AGG | 0.575743 | 1.4:-82348296 | None:intergenic |
| TGGGCAAGCAAAGGAGGACA+TGG | 0.577855 | 1.4:+82349363 | MS.gene71625:CDS |
| GCAGGTACTACATTTCGAGC+AGG | 0.578783 | 1.4:+82349044 | MS.gene71625:CDS |
| TCAAAGGCACTTGCACCACC+AGG | 0.579140 | 1.4:-82347675 | None:intergenic |
| TGGAGATGCTAAACCAAACA+TGG | 0.581860 | 1.4:+82349278 | MS.gene71625:CDS |
| AGCACTCCAGACATAGCTAA+AGG | 0.582825 | 1.4:+82349093 | MS.gene71625:CDS |
| GTCTCATGATGGCCTTTACA+GGG | 0.582962 | 1.4:+82348718 | MS.gene71625:CDS |
| GGAATATGACACGGATGGTG+CGG | 0.585843 | 1.4:+82349173 | MS.gene71625:CDS |
| GAAATGTGCCAAAGGACTGG+TGG | 0.588764 | 1.4:+82348066 | MS.gene71625:CDS |
| AAGTTGCCAAATTTCAGCAA+GGG | 0.593702 | 1.4:+82348209 | MS.gene71625:CDS |
| TTGGGTCCAACGGTAGCTCA+AGG | 0.599883 | 1.4:+82349133 | MS.gene71625:CDS |
| TTGCTATAGATTCAATGCAA+CGG | 0.601629 | 1.4:-82347935 | None:intergenic |
| AAAGTTGCCAAATTTCAGCA+AGG | 0.602734 | 1.4:+82348208 | MS.gene71625:CDS |
| GGATGGTGCGGGGACAGCTG+AGG | 0.606898 | 1.4:+82349185 | MS.gene71625:CDS |
| ATTAAGCTATGGGCAAGCAA+AGG | 0.609202 | 1.4:+82349354 | MS.gene71625:CDS |
| TGACAACTCTTTGATATGAG+AGG | 0.609742 | 1.4:-82347588 | None:intergenic |
| AAACTTAGCACATATCTCAA+AGG | 0.610871 | 1.4:-82347691 | None:intergenic |
| CTACACCATCCAGAAATAGG+AGG | 0.614194 | 1.4:+82349448 | MS.gene71625:CDS |
| AGAAAGGCAGTGTTTCGTGT+AGG | 0.616869 | 1.4:+82348303 | MS.gene71625:CDS |
| ACCTGCACAATTACACGTGT+CGG | 0.621274 | 1.4:-82349027 | None:intergenic |
| TATAGTACAGAAAATTGTAA+GGG | 0.624280 | 1.4:+82348484 | MS.gene71625:CDS |
| CTGTAAAGGCCATCATGAGA+CGG | 0.630996 | 1.4:-82348716 | None:intergenic |
| AATTGGTCAGCAATTAGAGG+AGG | 0.631067 | 1.4:+82348400 | MS.gene71625:CDS |
| TGCATGCAGTGCAAAATGAG+AGG | 0.631851 | 1.4:+82349001 | MS.gene71625:CDS |
| GATCCTTCGCGATTTCAGCA+AGG | 0.642218 | 1.4:-82348634 | None:intergenic |
| AACTAATCCGGAATATGACA+CGG | 0.643937 | 1.4:+82349164 | MS.gene71625:CDS |
| CAAATTTCAGACATTCCTGG+TGG | 0.649529 | 1.4:+82347660 | MS.gene71625:CDS |
| AATCCGGAATATGACACGGA+TGG | 0.653678 | 1.4:+82349168 | MS.gene71625:CDS |
| TAGAACTCGAAATGTGCCAA+AGG | 0.653925 | 1.4:+82348058 | MS.gene71625:CDS |
| GAGCACCCTGGTATCAGCAA+AGG | 0.656688 | 1.4:+82348919 | MS.gene71625:CDS |
| TATAACAAATATCAAAACCA+AGG | 0.664477 | 1.4:+82348133 | MS.gene71625:CDS |
| AGATATTATTGTCAGCATAG+GGG | 0.671630 | 1.4:+82347358 | MS.gene71625:CDS |
| ATACCTTGCTGAAATCGCGA+AGG | 0.673252 | 1.4:+82348631 | MS.gene71625:CDS |
| AAATGTGCCAAAGGACTGGT+GGG | 0.677067 | 1.4:+82348067 | MS.gene71625:CDS |
| CAAGGGTATGATCCCATGTG+AGG | 0.680645 | 1.4:+82348226 | MS.gene71625:CDS |
| GAAACACTACAGGAGCACCC+TGG | 0.682303 | 1.4:+82348907 | MS.gene71625:intron |
| AATATGACACGGATGGTGCG+GGG | 0.682586 | 1.4:+82349175 | MS.gene71625:CDS |
| AGATTAACAAAATCTGACAA+TGG | 0.684164 | 1.4:-82348665 | None:intergenic |
| GCTAGTACCCGATGACGCAG+CGG | 0.707239 | 1.4:-82349073 | None:intergenic |
| GCTTCGACACATCCTCACAT+GGG | 0.708999 | 1.4:-82348238 | None:intergenic |
| TTGAAGGGATAAGAAAGCCG+GGG | 0.713574 | 1.4:+82348561 | MS.gene71625:CDS |
| GCATCGTTGAGACAAAGCAA+CGG | 0.713953 | 1.4:+82349234 | MS.gene71625:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAACTACAAATAAAAAGATT+TGG | - | chr1.4:82347568-82347587 | None:intergenic | 15.0% |
| !! | AAATATTAAAAGAAACTGTT+GGG | - | chr1.4:82346549-82346568 | None:intergenic | 15.0% |
| !! | ATGTTAAAATTTAAATTCTC+TGG | + | chr1.4:82348843-82348862 | MS.gene71625:intron | 15.0% |
| !! | TATGCAAATTTCTTTATATT+AGG | - | chr1.4:82346509-82346528 | None:intergenic | 15.0% |
| !!! | AAATTGCTATTAAATTTATC+AGG | - | chr1.4:82347431-82347450 | None:intergenic | 15.0% |
| !!! | ATTTTTAGTGATTAAGAAAA+TGG | + | chr1.4:82346659-82346678 | MS.gene71625:intron | 15.0% |
| !!! | TTTTAATATTTCTTCACTAT+TGG | + | chr1.4:82346558-82346577 | MS.gene71625:intron | 15.0% |
| !! | ACAAAATTAATCTTTCTGAA+AGG | + | chr1.4:82346728-82346747 | MS.gene71625:intron | 20.0% |
| !! | CAATCTTCTATATTTGAAAA+GGG | - | chr1.4:82347157-82347176 | None:intergenic | 20.0% |
| !! | GAAATATTAAAAGAAACTGT+TGG | - | chr1.4:82346550-82346569 | None:intergenic | 20.0% |
| !! | GTCTAATTGAAAAGTAATAA+TGG | - | chr1.4:82347124-82347143 | None:intergenic | 20.0% |
| !! | TATAACAAATATCAAAACCA+AGG | + | chr1.4:82348133-82348152 | MS.gene71625:CDS | 20.0% |
| !! | TATAGTACAGAAAATTGTAA+GGG | + | chr1.4:82348484-82348503 | MS.gene71625:CDS | 20.0% |
| !! | TCTCTATACTGAATTTAAAA+TGG | - | chr1.4:82348797-82348816 | None:intergenic | 20.0% |
| !! | TTTCTTTATATTAGGAACAA+AGG | - | chr1.4:82346501-82346520 | None:intergenic | 20.0% |
| !!! | AAAATTGATGGATAAATAGA+AGG | - | chr1.4:82346919-82346938 | None:intergenic | 20.0% |
| !!! | AATAGTAATTTAAGCATTGA+CGG | - | chr1.4:82346942-82346961 | None:intergenic | 20.0% |
| !!! | CTTTTCAAATATAGAAGATT+GGG | + | chr1.4:82347156-82347175 | MS.gene71625:intron | 20.0% |
| ! | AAATCTGACAATGGTAAATT+AGG | - | chr1.4:82348659-82348678 | None:intergenic | 25.0% |
| ! | AGAACAAACTATCTAAAAAG+AGG | - | chr1.4:82347291-82347310 | None:intergenic | 25.0% |
| ! | AGATTAACAAAATCTGACAA+TGG | - | chr1.4:82348668-82348687 | None:intergenic | 25.0% |
| ! | ATAATGCTTGATCTAAATGA+AGG | + | chr1.4:82346778-82346797 | MS.gene71625:intron | 25.0% |
| ! | ATTCAATCTAACGATGTAAT+TGG | + | chr1.4:82348158-82348177 | MS.gene71625:CDS | 25.0% |
| ! | CCAATCTTCTATATTTGAAA+AGG | - | chr1.4:82347158-82347177 | None:intergenic | 25.0% |
| ! | CTGTTATTGGAAAAATGAAA+GGG | + | chr1.4:82349307-82349326 | MS.gene71625:CDS | 25.0% |
| ! | GAACAAACTATCTAAAAAGA+GGG | - | chr1.4:82347290-82347309 | None:intergenic | 25.0% |
| ! | GTATAGTACAGAAAATTGTA+AGG | + | chr1.4:82348483-82348502 | MS.gene71625:CDS | 25.0% |
| !! | AAATTTCATTCCTTTTAGTG+TGG | - | chr1.4:82347509-82347528 | None:intergenic | 25.0% |
| !! | CCTTTTCAAATATAGAAGAT+TGG | + | chr1.4:82347155-82347174 | MS.gene71625:intron | 25.0% |
| !! | GATGTTTTCTTCATTATTGA+GGG | - | chr1.4:82347631-82347650 | None:intergenic | 25.0% |
| !! | GTTGTTAAGTTCTTTTACAT+CGG | - | chr1.4:82347040-82347059 | None:intergenic | 25.0% |
| !! | TACAAAGTTTTACTTACACA+AGG | + | chr1.4:82347382-82347401 | MS.gene71625:CDS | 25.0% |
| !! | TTTTTGTAGAATCAGAAGAT+AGG | + | chr1.4:82348354-82348373 | MS.gene71625:CDS | 25.0% |
| !!! | TTCAAAGCATTTTAGTGTAA+CGG | - | chr1.4:82348890-82348909 | None:intergenic | 25.0% |
| AAACATCGATCTTGAAAAGA+AGG | - | chr1.4:82347815-82347834 | None:intergenic | 30.0% | |
| AAACTTAGCACATATCTCAA+AGG | - | chr1.4:82347694-82347713 | None:intergenic | 30.0% | |
| AGAAGTCTTTCATTAAGCTA+TGG | + | chr1.4:82349343-82349362 | MS.gene71625:CDS | 30.0% | |
| AGATATTATTGTCAGCATAG+GGG | + | chr1.4:82347358-82347377 | MS.gene71625:CDS | 30.0% | |
| ATAGTCATGAAGAACATAGA+AGG | - | chr1.4:82346760-82346779 | None:intergenic | 30.0% | |
| ATATAACCGAAAAAAGCTTC+CGG | + | chr1.4:82348001-82348020 | MS.gene71625:CDS | 30.0% | |
| ATCGTTAGATTGAATTTCCT+TGG | - | chr1.4:82348153-82348172 | None:intergenic | 30.0% | |
| ATGCATGAAAACATTGAGAA+AGG | + | chr1.4:82347786-82347805 | MS.gene71625:CDS | 30.0% | |
| ATTCAAATTTCAGACATTCC+TGG | + | chr1.4:82347657-82347676 | MS.gene71625:CDS | 30.0% | |
| CAAAAAAAGGAAGACGAAAA+AGG | - | chr1.4:82346698-82346717 | None:intergenic | 30.0% | |
| CAGATATTATTGTCAGCATA+GGG | + | chr1.4:82347357-82347376 | MS.gene71625:CDS | 30.0% | |
| CATTGAATCTATAGCAAACA+AGG | + | chr1.4:82347941-82347960 | MS.gene71625:CDS | 30.0% | |
| CATTGCATAAAGTAGAAAAG+CGG | - | chr1.4:82346625-82346644 | None:intergenic | 30.0% | |
| GAAGTCTTTCATTAAGCTAT+GGG | + | chr1.4:82349344-82349363 | MS.gene71625:CDS | 30.0% | |
| GAGATTACAATGTATGATGT+TGG | + | chr1.4:82348461-82348480 | MS.gene71625:CDS | 30.0% | |
| GCTATTAAATTTATCAGGCA+TGG | - | chr1.4:82347426-82347445 | None:intergenic | 30.0% | |
| GCTGTTATTGGAAAAATGAA+AGG | + | chr1.4:82349306-82349325 | MS.gene71625:CDS | 30.0% | |
| GTTGAAAACAGTTTCAAAGA+TGG | + | chr1.4:82349258-82349277 | MS.gene71625:CDS | 30.0% | |
| TCAGATATTATTGTCAGCAT+AGG | + | chr1.4:82347356-82347375 | MS.gene71625:CDS | 30.0% | |
| TTGCTATAGATTCAATGCAA+CGG | - | chr1.4:82347938-82347957 | None:intergenic | 30.0% | |
| ! | ATATGTGCTAAGTTTTGCTA+CGG | + | chr1.4:82347699-82347718 | MS.gene71625:CDS | 30.0% |
| ! | ATTTATCATCTTTTGCCTTG+TGG | + | chr1.4:82347531-82347550 | MS.gene71625:intron | 30.0% |
| ! | CGATGTTTTCTTCATTATTG+AGG | - | chr1.4:82347632-82347651 | None:intergenic | 30.0% |
| ! | GTGTAGATTTAACTTCTTCA+GGG | - | chr1.4:82349434-82349453 | None:intergenic | 30.0% |
| !! | AAAATGCTTTGAAACACTAC+AGG | + | chr1.4:82348897-82348916 | MS.gene71625:intron | 30.0% |
| !! | AATCACATTGTAAGCATTGA+GGG | - | chr1.4:82347736-82347755 | None:intergenic | 30.0% |
| !! | CTTTTTCGTCTTCCTTTTTT+TGG | + | chr1.4:82346696-82346715 | MS.gene71625:intron | 30.0% |
| !! | GGAATTAAAGGCATTAAGAA+AGG | + | chr1.4:82349206-82349225 | MS.gene71625:CDS | 30.0% |
| !! | TTCTTTGAAGCTGTCTTTAT+TGG | + | chr1.4:82347075-82347094 | MS.gene71625:intron | 30.0% |
| !!! | ATTTTGATTAAAGCACCAGA+TGG | + | chr1.4:82348437-82348456 | MS.gene71625:CDS | 30.0% |
| AAAAAGCTTCCGGAAGAAAA+TGG | + | chr1.4:82348011-82348030 | MS.gene71625:CDS | 35.0% | |
| AAAAGAGTAGAACCCTAGAA+TGG | - | chr1.4:82347241-82347260 | None:intergenic | 35.0% | |
| AAAGTTGCCAAATTTCAGCA+AGG | + | chr1.4:82348208-82348227 | MS.gene71625:CDS | 35.0% | |
| AACATGGATAAGGCTGTTAT+TGG | + | chr1.4:82349294-82349313 | MS.gene71625:CDS | 35.0% | |
| AACTAATCCGGAATATGACA+CGG | + | chr1.4:82349164-82349183 | MS.gene71625:CDS | 35.0% | |
| AACTGAATTCCTCCTATTTC+TGG | - | chr1.4:82349460-82349479 | None:intergenic | 35.0% | |
| AAGACTTTGTAGTCTGAAGA+AGG | - | chr1.4:82347881-82347900 | None:intergenic | 35.0% | |
| AAGCGGAAATCAAAACTAGT+AGG | - | chr1.4:82346608-82346627 | None:intergenic | 35.0% | |
| AAGTTGCCAAATTTCAGCAA+GGG | + | chr1.4:82348209-82348228 | MS.gene71625:CDS | 35.0% | |
| AATCTACACCATCCAGAAAT+AGG | + | chr1.4:82349445-82349464 | MS.gene71625:CDS | 35.0% | |
| AATTCCGAGATTGAATTGGT+TGG | + | chr1.4:82348527-82348546 | MS.gene71625:CDS | 35.0% | |
| AATTTATCAGGCATGGTAGA+AGG | - | chr1.4:82347419-82347438 | None:intergenic | 35.0% | |
| ATCATACCCTTGCTGAAATT+TGG | - | chr1.4:82348218-82348237 | None:intergenic | 35.0% | |
| ATGGTTGCAAAACTCATAGA+TGG | + | chr1.4:82348608-82348627 | MS.gene71625:CDS | 35.0% | |
| CAGATACATTTCAGACTGAT+GGG | + | chr1.4:82346345-82346364 | MS.gene71625:CDS | 35.0% | |
| CTTACAATGTGATTGCTACT+AGG | + | chr1.4:82347742-82347761 | MS.gene71625:CDS | 35.0% | |
| GATGTGCTAGTAAAGAGAAT+TGG | + | chr1.4:82348383-82348402 | MS.gene71625:CDS | 35.0% | |
| GGCTATTGACACATATTTGA+AGG | + | chr1.4:82348739-82348758 | MS.gene71625:CDS | 35.0% | |
| TACAAAGTCTTTGTCACCAT+TGG | + | chr1.4:82347890-82347909 | MS.gene71625:CDS | 35.0% | |
| TACATTGTAATCTCTCCATC+TGG | - | chr1.4:82348455-82348474 | None:intergenic | 35.0% | |
| TACGAAAAATGCTAGAGCTT+AGG | - | chr1.4:82347839-82347858 | None:intergenic | 35.0% | |
| TCACAATTCCGAGATTGAAT+TGG | + | chr1.4:82348523-82348542 | MS.gene71625:CDS | 35.0% | |
| TCTGTAAGCATAAGCTTTCA+AGG | - | chr1.4:82348189-82348208 | None:intergenic | 35.0% | |
| TGACAACTCTTTGATATGAG+AGG | - | chr1.4:82347591-82347610 | None:intergenic | 35.0% | |
| TGCTAAACCAAACATGGATA+AGG | + | chr1.4:82349284-82349303 | MS.gene71625:CDS | 35.0% | |
| TGTAGTCTGAAGAAGGATAA+TGG | - | chr1.4:82347874-82347893 | None:intergenic | 35.0% | |
| TTGATTCCTTTAGCTATGTC+TGG | - | chr1.4:82349102-82349121 | None:intergenic | 35.0% | |
| ! | ATAACAGCCTTATCCATGTT+TGG | - | chr1.4:82349294-82349313 | None:intergenic | 35.0% |
| ! | ATTCCTTTTAGTGTGGTGTA+AGG | - | chr1.4:82347502-82347521 | None:intergenic | 35.0% |
| ! | CAATCACATTGTAAGCATTG+AGG | - | chr1.4:82347737-82347756 | None:intergenic | 35.0% |
| ! | GGTGTAGATTTAACTTCTTC+AGG | - | chr1.4:82349435-82349454 | None:intergenic | 35.0% |
| ! | TAGCATTTTTCGTAGTTGGA+AGG | + | chr1.4:82347845-82347864 | MS.gene71625:CDS | 35.0% |
| ! | TCAGATTCATCTGAGAGTAT+TGG | + | chr1.4:82349399-82349418 | MS.gene71625:CDS | 35.0% |
| ! | TTCCTTTTAGTGTGGTGTAA+GGG | - | chr1.4:82347501-82347520 | None:intergenic | 35.0% |
| !! | AAGCATTGACGGAAAATTGA+TGG | - | chr1.4:82346931-82346950 | None:intergenic | 35.0% |
| !! | TCGATGTTTCTAAAGTTGAC+TGG | + | chr1.4:82347970-82347989 | MS.gene71625:CDS | 35.0% |
| !!! | TTCGTCTTCCTTTTTTTGGT+TGG | + | chr1.4:82346700-82346719 | MS.gene71625:intron | 35.0% |
| !!! | TTTCTTCCGGAAGCTTTTTT+CGG | - | chr1.4:82348010-82348029 | None:intergenic | 35.0% |
| AATTGGTCAGCAATTAGAGG+AGG | + | chr1.4:82348400-82348419 | MS.gene71625:CDS | 40.0% | |
| ACCTCCAACCAATTCAATCT+CGG | - | chr1.4:82348534-82348553 | None:intergenic | 40.0% | |
| ACTTGAAGGGATAAGAAAGC+CGG | + | chr1.4:82348559-82348578 | MS.gene71625:CDS | 40.0% | |
| AGATACATGCGGAGAAATGT+AGG | + | chr1.4:82346807-82346826 | MS.gene71625:intron | 40.0% | |
| ATGTGTCAATAGCCCTGTAA+AGG | - | chr1.4:82348733-82348752 | None:intergenic | 40.0% | |
| ATTAAGCTATGGGCAAGCAA+AGG | + | chr1.4:82349354-82349373 | MS.gene71625:CDS | 40.0% | |
| CAAATTTCAGACATTCCTGG+TGG | + | chr1.4:82347660-82347679 | MS.gene71625:CDS | 40.0% | |
| CCAGATACATTTCAGACTGA+TGG | + | chr1.4:82346344-82346363 | MS.gene71625:CDS | 40.0% | |
| CTGATGGGAACAACAATGTT+AGG | + | chr1.4:82346360-82346379 | MS.gene71625:CDS | 40.0% | |
| GAAGGATACACAGATACATG+CGG | + | chr1.4:82346796-82346815 | MS.gene71625:intron | 40.0% | |
| GAATCAAAGACCTGAGCATT+GGG | + | chr1.4:82349115-82349134 | MS.gene71625:CDS | 40.0% | |
| GAGAATTGGTCAGCAATTAG+AGG | + | chr1.4:82348397-82348416 | MS.gene71625:CDS | 40.0% | |
| GTCATGAAGAACATAGAAGG+CGG | - | chr1.4:82346757-82346776 | None:intergenic | 40.0% | |
| TAGAACTCGAAATGTGCCAA+AGG | + | chr1.4:82348058-82348077 | MS.gene71625:CDS | 40.0% | |
| TGAATGTACAAGTCCTAGTC+AGG | - | chr1.4:82346866-82346885 | None:intergenic | 40.0% | |
| TGGAGATGCTAAACCAAACA+TGG | + | chr1.4:82349278-82349297 | MS.gene71625:CDS | 40.0% | |
| TGTCATCGCCAACCAAAAAA+AGG | - | chr1.4:82346711-82346730 | None:intergenic | 40.0% | |
| TTATTGTTGCTGACCTGACT+AGG | + | chr1.4:82346850-82346869 | MS.gene71625:intron | 40.0% | |
| TTCCCTTACACCACACTAAA+AGG | + | chr1.4:82347496-82347515 | MS.gene71625:intron | 40.0% | |
| TTGATCTAGCCACCATTCTA+GGG | + | chr1.4:82347226-82347245 | MS.gene71625:intron | 40.0% | |
| TTTCACCTTTGCTGATACCA+GGG | - | chr1.4:82348927-82348946 | None:intergenic | 40.0% | |
| ! | AGTCTGAAATGTATCTGGCT+TGG | - | chr1.4:82346342-82346361 | None:intergenic | 40.0% |
| ! | AGTTCTAACTCCATTCTGGT+TGG | - | chr1.4:82348045-82348064 | None:intergenic | 40.0% |
| ! | CCATCAGTCTGAAATGTATC+TGG | - | chr1.4:82346347-82346366 | None:intergenic | 40.0% |
| ! | GAAGAGTATATGCCAGCTAA+TGG | + | chr1.4:82348948-82348967 | MS.gene71625:CDS | 40.0% |
| ! | GCTCTAGCATTTTTCGTAGT+TGG | + | chr1.4:82347841-82347860 | MS.gene71625:CDS | 40.0% |
| ! | TTCGAGTTCTAACTCCATTC+TGG | - | chr1.4:82348049-82348068 | None:intergenic | 40.0% |
| ! | TTGGAGTATCAGTATCCACA+AGG | - | chr1.4:82347549-82347568 | None:intergenic | 40.0% |
| ! | TTTTCACCTTTGCTGATACC+AGG | - | chr1.4:82348928-82348947 | None:intergenic | 40.0% |
| ! | TTTTGCAACCATCAGCTTAG+AGG | - | chr1.4:82348600-82348619 | None:intergenic | 40.0% |
| !! | GAATTCCTCCTATTTCTGGA+TGG | - | chr1.4:82349456-82349475 | None:intergenic | 40.0% |
| !! | GACTCAAAGCCATTTTCTTC+CGG | - | chr1.4:82348023-82348042 | None:intergenic | 40.0% |
| AAGGTCGGGAACAACTAATC+CGG | + | chr1.4:82349152-82349171 | MS.gene71625:CDS | 45.0% | |
| AAGTTGTTGCCTTCCGAGAA+AGG | + | chr1.4:82348287-82348306 | MS.gene71625:CDS | 45.0% | |
| AATCCGGAATATGACACGGA+TGG | + | chr1.4:82349168-82349187 | MS.gene71625:CDS | 45.0% | |
| ACACGAAACACTGCCTTTCT+CGG | - | chr1.4:82348303-82348322 | None:intergenic | 45.0% | |
| ACCATTGGATGAGGAGCAAA+AGG | + | chr1.4:82347905-82347924 | MS.gene71625:CDS | 45.0% | |
| ACCTGCACAATTACACGTGT+CGG | - | chr1.4:82349030-82349049 | None:intergenic | 45.0% | |
| AGAAAGGCAGTGTTTCGTGT+AGG | + | chr1.4:82348303-82348322 | MS.gene71625:CDS | 45.0% | |
| AGAGTAGAACCCTAGAATGG+TGG | - | chr1.4:82347238-82347257 | None:intergenic | 45.0% | |
| AGCACTCCAGACATAGCTAA+AGG | + | chr1.4:82349093-82349112 | MS.gene71625:CDS | 45.0% | |
| ATACCTTGCTGAAATCGCGA+AGG | + | chr1.4:82348631-82348650 | MS.gene71625:CDS | 45.0% | |
| ATCAGATGCCTCTAAGCTGA+TGG | + | chr1.4:82348589-82348608 | MS.gene71625:CDS | 45.0% | |
| CAGGTATGTTGCAAGTGAGT+TGG | + | chr1.4:82347331-82347350 | MS.gene71625:intron | 45.0% | |
| CAGTGTTTCGTGTAGGTTCT+TGG | + | chr1.4:82348310-82348329 | MS.gene71625:CDS | 45.0% | |
| CTACACCATCCAGAAATAGG+AGG | + | chr1.4:82349448-82349467 | MS.gene71625:CDS | 45.0% | |
| CTGTAAAGGCCATCATGAGA+CGG | - | chr1.4:82348719-82348738 | None:intergenic | 45.0% | |
| CTTGAAGGGATAAGAAAGCC+GGG | + | chr1.4:82348560-82348579 | MS.gene71625:CDS | 45.0% | |
| CTTGATCTAGCCACCATTCT+AGG | + | chr1.4:82347225-82347244 | MS.gene71625:intron | 45.0% | |
| GAGATTGAATTGGTTGGAGG+TGG | + | chr1.4:82348533-82348552 | MS.gene71625:CDS | 45.0% | |
| GCATCGTTGAGACAAAGCAA+CGG | + | chr1.4:82349234-82349253 | MS.gene71625:CDS | 45.0% | |
| GCTTTCTGCAATCCATTAGC+TGG | - | chr1.4:82348963-82348982 | None:intergenic | 45.0% | |
| GGAATCAAAGACCTGAGCAT+TGG | + | chr1.4:82349114-82349133 | MS.gene71625:CDS | 45.0% | |
| GGAGGACATGGAGAAAATAG+TGG | + | chr1.4:82349375-82349394 | MS.gene71625:CDS | 45.0% | |
| GTCTCATGATGGCCTTTACA+GGG | + | chr1.4:82348718-82348737 | MS.gene71625:CDS | 45.0% | |
| GTCTTTGTCACCATTGGATG+AGG | + | chr1.4:82347896-82347915 | MS.gene71625:CDS | 45.0% | |
| TCCGAGATTGAATTGGTTGG+AGG | + | chr1.4:82348530-82348549 | MS.gene71625:CDS | 45.0% | |
| TGCATGCAGTGCAAAATGAG+AGG | + | chr1.4:82349001-82349020 | MS.gene71625:CDS | 45.0% | |
| TTGAAGGGATAAGAAAGCCG+GGG | + | chr1.4:82348561-82348580 | MS.gene71625:CDS | 45.0% | |
| ! | AAATGTGCCAAAGGACTGGT+GGG | + | chr1.4:82348067-82348086 | MS.gene71625:CDS | 45.0% |
| ! | ACCTTTTGCTCCTCATCCAA+TGG | - | chr1.4:82347909-82347928 | None:intergenic | 45.0% |
| ! | CTCATTTTGCACTGCATGCA+AGG | - | chr1.4:82349001-82349020 | None:intergenic | 45.0% |
| ! | GAGGCATCTGATAAAATCCC+CGG | - | chr1.4:82348581-82348600 | None:intergenic | 45.0% |
| AAGCTATGGGCAAGCAAAGG+AGG | + | chr1.4:82349357-82349376 | MS.gene71625:CDS | 50.0% | |
| AATATGACACGGATGGTGCG+GGG | + | chr1.4:82349175-82349194 | MS.gene71625:CDS | 50.0% | |
| ACAAGATGCCTTTCATGCGC+AGG | + | chr1.4:82347312-82347331 | MS.gene71625:intron | 50.0% | |
| ACCGACACGTGTAATTGTGC+AGG | + | chr1.4:82349026-82349045 | MS.gene71625:CDS | 50.0% | |
| ATCTCTCGTCCGTCTCATGA+TGG | + | chr1.4:82348707-82348726 | MS.gene71625:CDS | 50.0% | |
| CGTCTCATGATGGCCTTTAC+AGG | + | chr1.4:82348717-82348736 | MS.gene71625:CDS | 50.0% | |
| CTCGAAATGTGCCAAAGGAC+TGG | + | chr1.4:82348063-82348082 | MS.gene71625:CDS | 50.0% | |
| GAAACACTGCCTTTCTCGGA+AGG | - | chr1.4:82348299-82348318 | None:intergenic | 50.0% | |
| GAAATGTGCCAAAGGACTGG+TGG | + | chr1.4:82348066-82348085 | MS.gene71625:CDS | 50.0% | |
| GAATATGACACGGATGGTGC+GGG | + | chr1.4:82349174-82349193 | MS.gene71625:CDS | 50.0% | |
| GATCCTTCGCGATTTCAGCA+AGG | - | chr1.4:82348637-82348656 | None:intergenic | 50.0% | |
| GCAACATACCTGCGCATGAA+AGG | - | chr1.4:82347323-82347342 | None:intergenic | 50.0% | |
| GCACCATCCGTGTCATATTC+CGG | - | chr1.4:82349174-82349193 | None:intergenic | 50.0% | |
| GCAGGTACTACATTTCGAGC+AGG | + | chr1.4:82349044-82349063 | MS.gene71625:CDS | 50.0% | |
| GCTTCGACACATCCTCACAT+GGG | - | chr1.4:82348241-82348260 | None:intergenic | 50.0% | |
| GGAATATGACACGGATGGTG+CGG | + | chr1.4:82349173-82349192 | MS.gene71625:CDS | 50.0% | |
| GGGGACAGCTGAGGAATTAA+AGG | + | chr1.4:82349194-82349213 | MS.gene71625:CDS | 50.0% | |
| GTGAGGATGTGTCGAAGCAT+CGG | + | chr1.4:82348243-82348262 | MS.gene71625:CDS | 50.0% | |
| TCTTCAACCCACCAGTCCTT+TGG | - | chr1.4:82348077-82348096 | None:intergenic | 50.0% | |
| TGCTTCGACACATCCTCACA+TGG | - | chr1.4:82348242-82348261 | None:intergenic | 50.0% | |
| TTGGAGGTGGCGAACTTGAA+GGG | + | chr1.4:82348546-82348565 | MS.gene71625:CDS | 50.0% | |
| ! | AGGTGTGCAGCAGAGTATCT+TGG | + | chr1.4:82347762-82347781 | MS.gene71625:CDS | 50.0% |
| ! | CAAGGGTATGATCCCATGTG+AGG | + | chr1.4:82348226-82348245 | MS.gene71625:CDS | 50.0% |
| !! | GGCTTTGAGTCCAACCAGAA+TGG | + | chr1.4:82348032-82348051 | MS.gene71625:CDS | 50.0% |
| GAGCACCCTGGTATCAGCAA+AGG | + | chr1.4:82348919-82348938 | MS.gene71625:CDS | 55.0% | |
| GTCCAACGGTAGCTCAAGGT+CGG | + | chr1.4:82349137-82349156 | MS.gene71625:CDS | 55.0% | |
| GTTGGAGGTGGCGAACTTGA+AGG | + | chr1.4:82348545-82348564 | MS.gene71625:CDS | 55.0% | |
| TACCGTTGGACCCAATGCTC+AGG | - | chr1.4:82349128-82349147 | None:intergenic | 55.0% | |
| TCCAACGGTAGCTCAAGGTC+GGG | + | chr1.4:82349138-82349157 | MS.gene71625:CDS | 55.0% | |
| TGGGCAAGCAAAGGAGGACA+TGG | + | chr1.4:82349363-82349382 | MS.gene71625:CDS | 55.0% | |
| TTGGGTCCAACGGTAGCTCA+AGG | + | chr1.4:82349133-82349152 | MS.gene71625:CDS | 55.0% | |
| !! | GAAACACTACAGGAGCACCC+TGG | + | chr1.4:82348907-82348926 | MS.gene71625:intron | 55.0% |
| !! | GACCTGAGCATTGGGTCCAA+CGG | + | chr1.4:82349123-82349142 | MS.gene71625:CDS | 55.0% |
| !! | TCAAAGGCACTTGCACCACC+AGG | - | chr1.4:82347678-82347697 | None:intergenic | 55.0% |
| GCTAGTACCCGATGACGCAG+CGG | - | chr1.4:82349076-82349095 | None:intergenic | 60.0% | |
| GGTCAGAACCGCTGCGTCAT+CGG | + | chr1.4:82349065-82349084 | MS.gene71625:CDS | 60.0% | |
| GTCAGAACCGCTGCGTCATC+GGG | + | chr1.4:82349066-82349085 | MS.gene71625:CDS | 60.0% | |
| TCCCGACCTTGAGCTACCGT+TGG | - | chr1.4:82349142-82349161 | None:intergenic | 60.0% | |
| GGATGGTGCGGGGACAGCTG+AGG | + | chr1.4:82349185-82349204 | MS.gene71625:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.4 | gene | 82346317 | 82349485 | 82346317 | ID=MS.gene71625 |
| chr1.4 | mRNA | 82346317 | 82349485 | 82346317 | ID=MS.gene71625.t1;Parent=MS.gene71625 |
| chr1.4 | exon | 82346317 | 82346381 | 82346317 | ID=MS.gene71625.t1.exon1;Parent=MS.gene71625.t1 |
| chr1.4 | CDS | 82346317 | 82346381 | 82346317 | ID=cds.MS.gene71625.t1;Parent=MS.gene71625.t1 |
| chr1.4 | exon | 82347334 | 82347403 | 82347334 | ID=MS.gene71625.t1.exon2;Parent=MS.gene71625.t1 |
| chr1.4 | CDS | 82347334 | 82347403 | 82347334 | ID=cds.MS.gene71625.t1;Parent=MS.gene71625.t1 |
| chr1.4 | exon | 82347585 | 82348760 | 82347585 | ID=MS.gene71625.t1.exon3;Parent=MS.gene71625.t1 |
| chr1.4 | CDS | 82347585 | 82348760 | 82347585 | ID=cds.MS.gene71625.t1;Parent=MS.gene71625.t1 |
| chr1.4 | exon | 82348919 | 82349485 | 82348919 | ID=MS.gene71625.t1.exon4;Parent=MS.gene71625.t1 |
| chr1.4 | CDS | 82348919 | 82349485 | 82348919 | ID=cds.MS.gene71625.t1;Parent=MS.gene71625.t1 |
| Gene Sequence |
| Protein sequence |
