Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene006030.t1 | XP_013469506.1 | 81.1 | 460 | 30 | 3 | 1 | 406 | 1 | 457 | 2.90E-180 | 641.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene006030.t1 | Q9C8P0 | 68.2 | 465 | 89 | 2 | 1 | 406 | 1 | 465 | 7.9e-158 | 558.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene006030.t1 | A0A072VNF5 | 81.1 | 460 | 30 | 3 | 1 | 406 | 1 | 457 | 2.1e-180 | 641.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene062739 | MS.gene006030 | PPI |
| MS.gene27364 | MS.gene006030 | PPI |
| MS.gene006030 | MS.gene24338 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene006030.t1 | MTR_1g096240 | 84.348 | 460 | 15 | 3 | 1 | 406 | 1 | 457 | 0.0 | 753 |
| MS.gene006030.t1 | MTR_1g111140 | 57.522 | 452 | 128 | 4 | 13 | 406 | 25 | 470 | 6.95e-173 | 491 |
| MS.gene006030.t1 | MTR_8g018770 | 33.178 | 428 | 222 | 10 | 40 | 404 | 115 | 541 | 4.82e-56 | 193 |
| MS.gene006030.t1 | MTR_1g091037 | 29.356 | 419 | 238 | 8 | 44 | 404 | 213 | 631 | 1.52e-42 | 158 |
| MS.gene006030.t1 | MTR_1g091037 | 48.333 | 60 | 31 | 0 | 44 | 103 | 87 | 146 | 9.89e-11 | 63.9 |
| MS.gene006030.t1 | MTR_1g091037 | 29.356 | 419 | 238 | 8 | 44 | 404 | 205 | 623 | 1.65e-42 | 158 |
| MS.gene006030.t1 | MTR_4g120220 | 25.000 | 432 | 245 | 8 | 51 | 406 | 89 | 517 | 5.85e-31 | 124 |
| MS.gene006030.t1 | MTR_5g093300 | 24.737 | 380 | 254 | 9 | 41 | 404 | 88 | 451 | 9.78e-26 | 108 |
| MS.gene006030.t1 | MTR_2g006820 | 24.607 | 382 | 253 | 9 | 41 | 404 | 85 | 449 | 1.96e-25 | 107 |
| MS.gene006030.t1 | MTR_1g096250 | 76.471 | 68 | 12 | 2 | 132 | 198 | 14 | 78 | 1.63e-22 | 91.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene006030.t1 | AT3G25860 | 63.636 | 308 | 85 | 2 | 119 | 406 | 180 | 480 | 3.07e-139 | 406 |
| MS.gene006030.t1 | AT3G13930 | 33.724 | 427 | 220 | 9 | 40 | 404 | 112 | 537 | 1.97e-58 | 199 |
| MS.gene006030.t1 | AT1G54220 | 33.021 | 427 | 223 | 11 | 40 | 404 | 112 | 537 | 4.49e-56 | 193 |
| MS.gene006030.t1 | AT1G54220 | 33.021 | 427 | 223 | 11 | 40 | 404 | 112 | 537 | 4.49e-56 | 193 |
| MS.gene006030.t1 | AT3G52200 | 29.274 | 427 | 228 | 10 | 44 | 404 | 217 | 635 | 2.54e-40 | 152 |
| MS.gene006030.t1 | AT3G52200 | 29.274 | 427 | 228 | 10 | 44 | 404 | 293 | 711 | 3.18e-40 | 152 |
| MS.gene006030.t1 | AT1G34430 | 71.000 | 100 | 29 | 0 | 1 | 100 | 1 | 100 | 4.75e-38 | 143 |
| MS.gene006030.t1 | AT3G06850 | 26.463 | 393 | 249 | 8 | 51 | 404 | 87 | 478 | 1.29e-32 | 128 |
| MS.gene006030.t1 | AT3G06850 | 26.463 | 393 | 249 | 8 | 51 | 404 | 87 | 478 | 1.29e-32 | 128 |
| MS.gene006030.t1 | AT4G26910 | 32.432 | 185 | 118 | 4 | 222 | 404 | 182 | 361 | 1.36e-20 | 92.8 |
| MS.gene006030.t1 | AT4G26910 | 32.432 | 185 | 118 | 4 | 222 | 404 | 280 | 459 | 2.49e-20 | 93.2 |
| MS.gene006030.t1 | AT4G26910 | 32.432 | 185 | 118 | 4 | 222 | 404 | 281 | 460 | 2.62e-20 | 92.8 |
| MS.gene006030.t1 | AT5G55070 | 31.892 | 185 | 119 | 4 | 222 | 404 | 281 | 460 | 2.86e-19 | 89.7 |
| MS.gene006030.t1 | AT5G55070 | 31.892 | 185 | 119 | 4 | 222 | 404 | 281 | 460 | 2.86e-19 | 89.7 |
Find 126 sgRNAs with CRISPR-Local
Find 306 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCGGTGAAGACTGCGGTTTC+TGG | 0.157662 | 1.3:+66887059 | MS.gene006030:CDS |
| GTGGAGTTGGGACAAATTAT+TGG | 0.234111 | 1.3:+66886957 | MS.gene006030:CDS |
| TCTATTCATTGTCTAGAAAA+TGG | 0.262227 | 1.3:+66888159 | MS.gene006030:CDS |
| GACATCCATGTCAGCTTTAT+CGG | 0.262634 | 1.3:-66886601 | None:intergenic |
| CTTTCCAACCTGGGAATGTT+TGG | 0.301930 | 1.3:+66889925 | MS.gene006030:CDS |
| GACTAGAAAGTAAGATCTTT+AGG | 0.307512 | 1.3:-66890410 | None:intergenic |
| ATTATTGGGACTGGACCTTC+AGG | 0.318351 | 1.3:+66886972 | MS.gene006030:CDS |
| TAGGAATATGGTGGAGAGTT+TGG | 0.321155 | 1.3:+66887133 | MS.gene006030:CDS |
| CTACAACTAGAATTTATTAC+AGG | 0.323083 | 1.3:-66887942 | None:intergenic |
| GCGGTTTCTGGTGTTGAATT+GGG | 0.333108 | 1.3:+66887071 | MS.gene006030:CDS |
| ACTTATTACACCGGTGCTTC+AGG | 0.337206 | 1.3:+66888031 | MS.gene006030:CDS |
| TGCGGTTTCTGGTGTTGAAT+TGG | 0.350193 | 1.3:+66887070 | MS.gene006030:CDS |
| ATCACCCTATGCGAAGAAAT+TGG | 0.352194 | 1.3:+66886920 | MS.gene006030:CDS |
| AGGAAGAGAGGAACGGTGTT+TGG | 0.355488 | 1.3:-66886383 | None:intergenic |
| GGGAGGTGCGGTTGCGGCGG+AGG | 0.360419 | 1.3:-66886413 | None:intergenic |
| GGCTGTTGTTTCAAAACATC+CGG | 0.381479 | 1.3:+66886869 | MS.gene006030:CDS |
| AAAAGATTACTCACGGTTCC+AGG | 0.387201 | 1.3:-66889976 | None:intergenic |
| TGTTGCGGCGGCAGCGGAGC+CGG | 0.391903 | 1.3:+66887040 | MS.gene006030:CDS |
| TGGAGTTGGGACAAATTATT+GGG | 0.398298 | 1.3:+66886958 | MS.gene006030:CDS |
| ACTAGAAAGTAAGATCTTTA+GGG | 0.398498 | 1.3:-66890409 | None:intergenic |
| AGGGAGTGTTGCGGCGGCAG+CGG | 0.408155 | 1.3:+66887034 | MS.gene006030:CDS |
| CTGTAATAAATTCTAGTTGT+AGG | 0.410555 | 1.3:+66887943 | MS.gene006030:CDS |
| GTTGAAGCATTTGCAGCTAC+AGG | 0.415098 | 1.3:+66887014 | MS.gene006030:CDS |
| GCCGCTGCAACAACCTTCTT+CGG | 0.416181 | 1.3:-66886849 | None:intergenic |
| AGGCTGCAGCTGCTTAGCTC+TGG | 0.423811 | 1.3:-66888201 | None:intergenic |
| CTCTTCCCTCCCTCCGAAGC+CGG | 0.426499 | 1.3:-66886888 | None:intergenic |
| GGTTGAAGTGGTGCGGTAAA+GGG | 0.433200 | 1.3:-66886433 | None:intergenic |
| GAAGGAATTGAAGGTGGAGT+TGG | 0.435661 | 1.3:+66886944 | MS.gene006030:CDS |
| TGGTTGAAGTGGTGCGGTAA+AGG | 0.437638 | 1.3:-66886434 | None:intergenic |
| TGTTTCAAAACATCCGGCTT+CGG | 0.443277 | 1.3:+66886875 | MS.gene006030:CDS |
| GAATGCTGTGAGTAGGAATA+TGG | 0.448089 | 1.3:+66887121 | MS.gene006030:CDS |
| GGTGCGGTTGCGGCGGAGGA+CGG | 0.457710 | 1.3:-66886409 | None:intergenic |
| AACAACGACACTATCGCCTT+TGG | 0.457941 | 1.3:-66886571 | None:intergenic |
| GCCGCTATTGTTGTTGAAGA+AGG | 0.464692 | 1.3:+66886648 | MS.gene006030:CDS |
| GCATTCTGCATTGTCGTAAA+CGG | 0.467916 | 1.3:-66887104 | None:intergenic |
| TTCGCCAATTTCTTCGCATA+GGG | 0.468048 | 1.3:-66886924 | None:intergenic |
| ATGGAAGGAGTTGGTTGATA+AGG | 0.468324 | 1.3:+66888178 | MS.gene006030:CDS |
| GTTGCGGCGGAGGACGGTGG+AGG | 0.472614 | 1.3:-66886403 | None:intergenic |
| TGGACCTTCAGGGAGGGTTG+TGG | 0.475962 | 1.3:+66886983 | MS.gene006030:CDS |
| GCGGACGACGAAGTGGTTTG+TGG | 0.479260 | 1.3:-66886454 | None:intergenic |
| AAGGAATTGAAGGTGGAGTT+GGG | 0.480219 | 1.3:+66886945 | MS.gene006030:CDS |
| GCCAACTGTTGTGGCTACTA+AGG | 0.480368 | 1.3:+66890149 | MS.gene006030:CDS |
| GGTGCTTCAGGATGCTGATA+AGG | 0.482446 | 1.3:+66888043 | MS.gene006030:CDS |
| TGTAATAAATTCTAGTTGTA+GGG | 0.485785 | 1.3:+66887944 | MS.gene006030:CDS |
| CGGTTTCTGGTGTTGAATTG+GGG | 0.486100 | 1.3:+66887072 | MS.gene006030:CDS |
| GGTAAAGGGAGGTGCGGTTG+CGG | 0.495558 | 1.3:-66886419 | None:intergenic |
| GCAGTCGCTGTGGCTATAGA+TGG | 0.499476 | 1.3:+66888005 | MS.gene006030:CDS |
| TTTGATGCTATTCTGCCTCC+TGG | 0.504002 | 1.3:+66889958 | MS.gene006030:CDS |
| TGGGACTGGACCTTCAGGGA+GGG | 0.505400 | 1.3:+66886977 | MS.gene006030:CDS |
| TTGGGACAAATTATTGGGAC+TGG | 0.506592 | 1.3:+66886963 | MS.gene006030:CDS |
| CCGAGGGTAAAATCGTCTCT+TGG | 0.507291 | 1.3:+66886523 | MS.gene006030:CDS |
| CTTCGCCAATTTCTTCGCAT+AGG | 0.507995 | 1.3:-66886925 | None:intergenic |
| AAATATCAGATCAAGTCAAA+GGG | 0.514236 | 1.3:+66887864 | MS.gene006030:intron |
| AAAATATCAGATCAAGTCAA+AGG | 0.514317 | 1.3:+66887863 | MS.gene006030:intron |
| TACTTTCACTCTTTCCAACC+TGG | 0.519342 | 1.3:+66889915 | MS.gene006030:CDS |
| TGTAGAATCTCAACCGAAGA+AGG | 0.522905 | 1.3:+66886836 | MS.gene006030:intron |
| CGAATCCGATAAAGCTGACA+TGG | 0.527004 | 1.3:+66886596 | MS.gene006030:CDS |
| GTCTAGAAAATGGAAGGAGT+TGG | 0.527414 | 1.3:+66888169 | MS.gene006030:CDS |
| GTCATTGTGGAACTGAGTGC+TGG | 0.528269 | 1.3:-66886501 | None:intergenic |
| GCGGTTGCGGCGGAGGACGG+TGG | 0.528877 | 1.3:-66886406 | None:intergenic |
| AACATCCGGCTTCGGAGGGA+GGG | 0.535366 | 1.3:+66886883 | MS.gene006030:CDS |
| GAAATTGGCGAAGGAATTGA+AGG | 0.536019 | 1.3:+66886935 | MS.gene006030:CDS |
| AAACATCCGGCTTCGGAGGG+AGG | 0.541577 | 1.3:+66886882 | MS.gene006030:CDS |
| AAAGGGAGGTGCGGTTGCGG+CGG | 0.543956 | 1.3:-66886416 | None:intergenic |
| TTCAAAACATCCGGCTTCGG+AGG | 0.546074 | 1.3:+66886878 | MS.gene006030:CDS |
| CCAGAAACCGCAGTCTTCAC+CGG | 0.546950 | 1.3:-66887059 | None:intergenic |
| TATGACAGCATTGCTTGCTA+AGG | 0.547412 | 1.3:+66887893 | MS.gene006030:CDS |
| GATCAACGCCAAACATTCCC+AGG | 0.548864 | 1.3:-66889933 | None:intergenic |
| GTATACCCAACTCTAAAAGT+AGG | 0.550472 | 1.3:-66887161 | None:intergenic |
| TCCTTAGTAGCCACAACAGT+TGG | 0.552942 | 1.3:-66890150 | None:intergenic |
| GGAGGACGGTGGAGGAAGAG+AGG | 0.554510 | 1.3:-66886395 | None:intergenic |
| TTATTGGGACTGGACCTTCA+GGG | 0.556941 | 1.3:+66886973 | MS.gene006030:CDS |
| TTCATTGTCTAGAAAATGGA+AGG | 0.557631 | 1.3:+66888163 | MS.gene006030:CDS |
| ATAAATTCTAGTTGTAGGGA+TGG | 0.558864 | 1.3:+66887948 | MS.gene006030:CDS |
| AACTCTGTCTCAGATTATTG+AGG | 0.559596 | 1.3:+66890385 | MS.gene006030:CDS |
| AACGCCAAACATTCCCAGGT+TGG | 0.559639 | 1.3:-66889929 | None:intergenic |
| GTCTCTTGGATCAAATCAGA+AGG | 0.563675 | 1.3:+66886537 | MS.gene006030:CDS |
| ACTTTCACTCTTTCCAACCT+GGG | 0.563865 | 1.3:+66889916 | MS.gene006030:CDS |
| GCTACTAAGGATGGTCGCAT+TGG | 0.565084 | 1.3:+66890162 | MS.gene006030:CDS |
| AGCTACAGGGAGTGTTGCGG+CGG | 0.568786 | 1.3:+66887028 | MS.gene006030:CDS |
| TCAAAACATCCGGCTTCGGA+GGG | 0.574858 | 1.3:+66886879 | MS.gene006030:CDS |
| GAATATGGTGGAGAGTTTGG+CGG | 0.576386 | 1.3:+66887136 | MS.gene006030:CDS |
| TTATCAGCATCCTGAAGCAC+CGG | 0.577664 | 1.3:-66888041 | None:intergenic |
| TTGAAGCATTTGCAGCTACA+GGG | 0.579570 | 1.3:+66887015 | MS.gene006030:CDS |
| GCAGATCACCGTGTAATCTA+CGG | 0.582939 | 1.3:+66890338 | MS.gene006030:CDS |
| GAAGTGGTTTGTGGTTGAAG+TGG | 0.588895 | 1.3:-66886445 | None:intergenic |
| GTGCTGGCATGAAAATTTCG+CGG | 0.589246 | 1.3:-66886485 | None:intergenic |
| ACTGTTGTGGCTACTAAGGA+TGG | 0.592061 | 1.3:+66890153 | MS.gene006030:CDS |
| TGCAGCTACAGGGAGTGTTG+CGG | 0.595016 | 1.3:+66887025 | MS.gene006030:CDS |
| ACCGAAGAAGGTTGTTGCAG+CGG | 0.599613 | 1.3:+66886848 | MS.gene006030:CDS |
| TGGCATGAAGAATCAAATGC+AGG | 0.601842 | 1.3:+66890182 | MS.gene006030:CDS |
| AACATCACAGCCAACTGTTG+TGG | 0.603272 | 1.3:+66890140 | MS.gene006030:CDS |
| GTACCTGTGGTGTATTCATG+AGG | 0.605362 | 1.3:-66888221 | None:intergenic |
| TGGTGTTGAATTGGGGACTG+TGG | 0.606170 | 1.3:+66887079 | MS.gene006030:CDS |
| TGCTGTGAGTAGGAATATGG+TGG | 0.607504 | 1.3:+66887124 | MS.gene006030:CDS |
| ATTGGCGAAGGAATTGAAGG+TGG | 0.607948 | 1.3:+66886938 | MS.gene006030:CDS |
| GATCAGAACCGTAGATTACA+CGG | 0.607965 | 1.3:-66890346 | None:intergenic |
| CAATGCAGAATGCTGTGAGT+AGG | 0.608840 | 1.3:+66887114 | MS.gene006030:CDS |
| TGGTGCGGTAAAGGGAGGTG+CGG | 0.619698 | 1.3:-66886425 | None:intergenic |
| TAAGGCTACAGCACTCGCGC+TGG | 0.620887 | 1.3:+66887911 | MS.gene006030:CDS |
| TTAGCCACAACCCTCCCTGA+AGG | 0.622517 | 1.3:-66886987 | None:intergenic |
| TCTCTTGGATCAAATCAGAA+GGG | 0.623110 | 1.3:+66886538 | MS.gene006030:CDS |
| GTCGCTGTGGCTATAGATGG+TGG | 0.623776 | 1.3:+66888008 | MS.gene006030:CDS |
| CTCTTGGATCAAATCAGAAG+GGG | 0.626293 | 1.3:+66886539 | MS.gene006030:CDS |
| ACTTGATGCTCTCTACAAGA+AGG | 0.626411 | 1.3:+66887199 | MS.gene006030:CDS |
| GGAGGGAGGGAAGAGAGTGG+TGG | 0.629189 | 1.3:+66886896 | MS.gene006030:CDS |
| CATCAGCATTGCAGTCGCTG+TGG | 0.634326 | 1.3:+66887995 | MS.gene006030:CDS |
| TCTTAGCGCGGACGACGAAG+TGG | 0.641526 | 1.3:-66886461 | None:intergenic |
| GAAGGGGACAAACTCTCCAA+AGG | 0.641779 | 1.3:+66886555 | MS.gene006030:CDS |
| AGCGGAGCCGGTGAAGACTG+CGG | 0.644910 | 1.3:+66887052 | MS.gene006030:CDS |
| TTGGGACTGGACCTTCAGGG+AGG | 0.647676 | 1.3:+66886976 | MS.gene006030:CDS |
| TACAACTAGAATTTATTACA+GGG | 0.648373 | 1.3:-66887941 | None:intergenic |
| TTCGGAGGGAGGGAAGAGAG+TGG | 0.651131 | 1.3:+66886893 | MS.gene006030:CDS |
| CTCAGTTCCACAATGACCGA+GGG | 0.651964 | 1.3:+66886507 | MS.gene006030:CDS |
| CTATGCGAAGAAATTGGCGA+AGG | 0.655491 | 1.3:+66886926 | MS.gene006030:CDS |
| GGTTTGTGGTTGAAGTGGTG+CGG | 0.655720 | 1.3:-66886440 | None:intergenic |
| CAGCCTCATGAATACACCAC+AGG | 0.661316 | 1.3:+66888218 | MS.gene006030:CDS |
| ACCTTCTTCAACAACAATAG+CGG | 0.666193 | 1.3:-66886649 | None:intergenic |
| ACTCAGTTCCACAATGACCG+AGG | 0.671313 | 1.3:+66886506 | MS.gene006030:CDS |
| AGATGGTGGACTTATTACAC+CGG | 0.677164 | 1.3:+66888022 | MS.gene006030:CDS |
| AAATTTCGCGGATCTTAGCG+CGG | 0.685281 | 1.3:-66886473 | None:intergenic |
| TGAAGTGGTGCGGTAAAGGG+AGG | 0.698500 | 1.3:-66886430 | None:intergenic |
| AGATTACTCACGGTTCCAGG+AGG | 0.719011 | 1.3:-66889973 | None:intergenic |
| GATGTCGAAACTTTCTACGA+CGG | 0.722494 | 1.3:+66886618 | MS.gene006030:CDS |
| CTTCAACAACAATAGCGGCG+AGG | 0.722816 | 1.3:-66886644 | None:intergenic |
| ACGGTGGAGGAAGAGAGGAA+CGG | 0.731025 | 1.3:-66886390 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | GTTTATTTGATATATATTAT+AGG | + | chr1.3:66888130-66888149 | MS.gene006030:intron | 10.0% |
| !!! | TTAGTCAAATATTTAATTTT+AGG | + | chr1.3:66889560-66889579 | MS.gene006030:intron | 10.0% |
| !! | AAAAAAAAAAAGATTACTCA+CGG | - | chr1.3:66889986-66890005 | None:intergenic | 15.0% |
| !! | ACAGTAATTATCTATTTATT+GGG | + | chr1.3:66888242-66888261 | MS.gene006030:intron | 15.0% |
| !! | ATTTATGGTCTATAAAAAAA+TGG | - | chr1.3:66889689-66889708 | None:intergenic | 15.0% |
| !! | CAAAAATTTAAAAAATGGAT+CGG | + | chr1.3:66888403-66888422 | MS.gene006030:intron | 15.0% |
| !! | TACAGTAATTATCTATTTAT+TGG | + | chr1.3:66888241-66888260 | MS.gene006030:intron | 15.0% |
| !! | TATCTAAAAGATAAAACTAA+CGG | - | chr1.3:66888627-66888646 | None:intergenic | 15.0% |
| !! | TTATTGTTTATGAAATTGTT+GGG | - | chr1.3:66889260-66889279 | None:intergenic | 15.0% |
| !! | TTTATGGTCTATAAAAAAAT+GGG | - | chr1.3:66889688-66889707 | None:intergenic | 15.0% |
| !! | TTTATTGTTTATGAAATTGT+TGG | - | chr1.3:66889261-66889280 | None:intergenic | 15.0% |
| !!! | GATCCATTTTTTAAATTTTT+GGG | - | chr1.3:66888404-66888423 | None:intergenic | 15.0% |
| !!! | TTAGTTTTATCTTTTAGATA+TGG | + | chr1.3:66888627-66888646 | MS.gene006030:intron | 15.0% |
| !! | AAAAAAGACCTTATGTTAAA+TGG | - | chr1.3:66889370-66889389 | None:intergenic | 20.0% |
| !! | AACAAAGTTATATAAGCTAA+AGG | + | chr1.3:66888798-66888817 | MS.gene006030:intron | 20.0% |
| !! | ATATTAACAAATCTAGTCTA+AGG | - | chr1.3:66889091-66889110 | None:intergenic | 20.0% |
| !! | ATTGTAAACCTCAAAAAATA+CGG | - | chr1.3:66888991-66889010 | None:intergenic | 20.0% |
| !! | ATTGTACTAGGAATAATTTA+TGG | - | chr1.3:66889704-66889723 | None:intergenic | 20.0% |
| !! | GTTTAGACATTTATATATGT+TGG | + | chr1.3:66890212-66890231 | MS.gene006030:intron | 20.0% |
| !! | TACAACTAGAATTTATTACA+GGG | - | chr1.3:66887944-66887963 | None:intergenic | 20.0% |
| !! | TATGTGTAAGTATTATATAC+CGG | - | chr1.3:66889499-66889518 | None:intergenic | 20.0% |
| !! | TGTCCCAAAAATTTAAAAAA+TGG | + | chr1.3:66888398-66888417 | MS.gene006030:intron | 20.0% |
| !! | TTAAGGATTCTATGATAAAT+TGG | - | chr1.3:66888292-66888311 | None:intergenic | 20.0% |
| !! | TTATAGAACTCAAATGTTTA+GGG | + | chr1.3:66887389-66887408 | MS.gene006030:intron | 20.0% |
| !! | TTATGGTCTATAAAAAAATG+GGG | - | chr1.3:66889687-66889706 | None:intergenic | 20.0% |
| !! | TTTATAGAACTCAAATGTTT+AGG | + | chr1.3:66887388-66887407 | MS.gene006030:intron | 20.0% |
| !!! | AATCTTATTTGTGATCTAAT+CGG | + | chr1.3:66890048-66890067 | MS.gene006030:intron | 20.0% |
| !!! | CATAGAATCCTTAAATTTTT+GGG | + | chr1.3:66888298-66888317 | MS.gene006030:intron | 20.0% |
| !!! | CGATCCATTTTTTAAATTTT+TGG | - | chr1.3:66888405-66888424 | None:intergenic | 20.0% |
| !!! | TCATAGAATCCTTAAATTTT+TGG | + | chr1.3:66888297-66888316 | MS.gene006030:intron | 20.0% |
| !!! | TGTAATAAATTCTAGTTGTA+GGG | + | chr1.3:66887944-66887963 | MS.gene006030:CDS | 20.0% |
| !!! | TGTTGTTTTTTTATAACTGA+AGG | + | chr1.3:66890288-66890307 | MS.gene006030:intron | 20.0% |
| !!! | TTGAATTTTGACATTCAATT+GGG | + | chr1.3:66889827-66889846 | MS.gene006030:intron | 20.0% |
| !!! | TTTTTTTTTGGATAACAAGA+GGG | + | chr1.3:66890004-66890023 | MS.gene006030:intron | 20.0% |
| !!! | TTTTTTTTTTGGATAACAAG+AGG | + | chr1.3:66890003-66890022 | MS.gene006030:intron | 20.0% |
| ! | AAAATATCAGATCAAGTCAA+AGG | + | chr1.3:66887863-66887882 | MS.gene006030:intron | 25.0% |
| ! | AAAATCCTTGAAGAAAAGTT+TGG | + | chr1.3:66888568-66888587 | MS.gene006030:intron | 25.0% |
| ! | AAATATCAGATCAAGTCAAA+GGG | + | chr1.3:66887864-66887883 | MS.gene006030:intron | 25.0% |
| ! | AACGAATGAAATGTAATTTG+TGG | + | chr1.3:66888667-66888686 | MS.gene006030:intron | 25.0% |
| ! | ATAAAAAAACAACAGAAGTC+TGG | - | chr1.3:66890282-66890301 | None:intergenic | 25.0% |
| ! | ATAAATCTGAAAGAATTAGC+AGG | + | chr1.3:66889042-66889061 | MS.gene006030:intron | 25.0% |
| ! | ATATTTGACTAATCAAGTTC+TGG | - | chr1.3:66889552-66889571 | None:intergenic | 25.0% |
| ! | ATCACAAATAAGATTACTCA+CGG | - | chr1.3:66890043-66890062 | None:intergenic | 25.0% |
| ! | CAAAGCATGAAATTAATGAT+TGG | + | chr1.3:66889128-66889147 | MS.gene006030:intron | 25.0% |
| ! | CAGTAAAACCATTTAACATA+AGG | + | chr1.3:66889359-66889378 | MS.gene006030:intron | 25.0% |
| ! | CTACAACTAGAATTTATTAC+AGG | - | chr1.3:66887945-66887964 | None:intergenic | 25.0% |
| ! | GAATTTCTGAGCTAAATAAA+AGG | + | chr1.3:66887469-66887488 | MS.gene006030:intron | 25.0% |
| ! | TACAATCAATCAATCATACA+TGG | - | chr1.3:66887694-66887713 | None:intergenic | 25.0% |
| ! | TACATAATTCACCACTTATT+GGG | + | chr1.3:66887334-66887353 | MS.gene006030:intron | 25.0% |
| ! | TAGACATTTATATATGTTGG+AGG | + | chr1.3:66890215-66890234 | MS.gene006030:intron | 25.0% |
| ! | TATAGAACTCAAATGTTTAG+GGG | + | chr1.3:66887390-66887409 | MS.gene006030:intron | 25.0% |
| ! | TATGGTCTATAAAAAAATGG+GGG | - | chr1.3:66889686-66889705 | None:intergenic | 25.0% |
| ! | TCATGATATGTGTATAGAAT+TGG | + | chr1.3:66888457-66888476 | MS.gene006030:intron | 25.0% |
| ! | TCTATTCATTGTCTAGAAAA+TGG | + | chr1.3:66888159-66888178 | MS.gene006030:CDS | 25.0% |
| ! | TGCTAAGCTATTTAATATGA+GGG | + | chr1.3:66888897-66888916 | MS.gene006030:intron | 25.0% |
| ! | TGTATACATCAACTTTCTAT+AGG | + | chr1.3:66888945-66888964 | MS.gene006030:intron | 25.0% |
| ! | TTACATAATTCACCACTTAT+TGG | + | chr1.3:66887333-66887352 | MS.gene006030:intron | 25.0% |
| ! | TTATCAAAAATCCCAATAAG+TGG | - | chr1.3:66887348-66887367 | None:intergenic | 25.0% |
| ! | TTTAGATATGGAAATGAATG+TGG | + | chr1.3:66888639-66888658 | MS.gene006030:intron | 25.0% |
| ! | TTTGCATCTTAATGTTTACA+GGG | + | chr1.3:66889639-66889658 | MS.gene006030:intron | 25.0% |
| !! | ACGAATGAAATGTAATTTGT+GGG | + | chr1.3:66888668-66888687 | MS.gene006030:intron | 25.0% |
| !! | CTGTAATAAATTCTAGTTGT+AGG | + | chr1.3:66887943-66887962 | MS.gene006030:CDS | 25.0% |
| !! | TTTTGCATCTTAATGTTTAC+AGG | + | chr1.3:66889638-66889657 | MS.gene006030:intron | 25.0% |
| !!! | AAATGGTTTTACTGAAACTT+TGG | - | chr1.3:66889353-66889372 | None:intergenic | 25.0% |
| !!! | AATCCTTAAATTTTTGGGAA+GGG | + | chr1.3:66888303-66888322 | MS.gene006030:intron | 25.0% |
| !!! | CATATTTTTGCAAGTGTTAT+TGG | + | chr1.3:66887445-66887464 | MS.gene006030:intron | 25.0% |
| !!! | CATTATATAGCTTGTTCTTT+TGG | - | chr1.3:66889798-66889817 | None:intergenic | 25.0% |
| !!! | GAGGATGACTTATTTATTTT+TGG | + | chr1.3:66890234-66890253 | MS.gene006030:intron | 25.0% |
| !!! | GTTGAATTTTGACATTCAAT+TGG | + | chr1.3:66889826-66889845 | MS.gene006030:intron | 25.0% |
| !!! | TTTGTGGGTTTATTTTTGTA+GGG | + | chr1.3:66890099-66890118 | MS.gene006030:intron | 25.0% |
| !!! | TTTTGTGGGTTTATTTTTGT+AGG | + | chr1.3:66890098-66890117 | MS.gene006030:intron | 25.0% |
| AAGGAAATCCGAGTTAAAAT+TGG | + | chr1.3:66888817-66888836 | MS.gene006030:intron | 30.0% | |
| AATCCCTTTGTAACAAATAG+CGG | + | chr1.3:66889603-66889622 | MS.gene006030:intron | 30.0% | |
| AATGTTTACAGGGAAGTTTA+TGG | + | chr1.3:66889649-66889668 | MS.gene006030:intron | 30.0% | |
| ATAGATAATTACTGTACCTG+TGG | - | chr1.3:66888237-66888256 | None:intergenic | 30.0% | |
| ATATGAGGTAGAATTGTACT+AGG | - | chr1.3:66889716-66889735 | None:intergenic | 30.0% | |
| ATGGTGTTCACAGAATAATT+TGG | - | chr1.3:66887781-66887800 | None:intergenic | 30.0% | |
| ATGGTGTTCACATGTTAAAA+AGG | + | chr1.3:66888108-66888127 | MS.gene006030:intron | 30.0% | |
| ATTACCTACCATTCTTAGTT+TGG | + | chr1.3:66889416-66889435 | MS.gene006030:intron | 30.0% | |
| GCAAATAAAGCGAATATATG+AGG | - | chr1.3:66889731-66889750 | None:intergenic | 30.0% | |
| GCTAAGCTATTTAATATGAG+GGG | + | chr1.3:66888898-66888917 | MS.gene006030:intron | 30.0% | |
| GTGCTAAGCTATTTAATATG+AGG | + | chr1.3:66888896-66888915 | MS.gene006030:intron | 30.0% | |
| TAAGAATGGTAGGTAATAGA+GGG | - | chr1.3:66889413-66889432 | None:intergenic | 30.0% | |
| TATCTTATCCCACTTTAGTT+AGG | + | chr1.3:66889298-66889317 | MS.gene006030:intron | 30.0% | |
| TTCATTGTCTAGAAAATGGA+AGG | + | chr1.3:66888163-66888182 | MS.gene006030:CDS | 30.0% | |
| TTGTTAATATTGCGAGAACA+GGG | + | chr1.3:66889101-66889120 | MS.gene006030:intron | 30.0% | |
| TTTGTTAATATTGCGAGAAC+AGG | + | chr1.3:66889100-66889119 | MS.gene006030:intron | 30.0% | |
| ! | ATAAATTCTAGTTGTAGGGA+TGG | + | chr1.3:66887948-66887967 | MS.gene006030:CDS | 30.0% |
| ! | CGAATGAAATGTAATTTGTG+GGG | + | chr1.3:66888669-66888688 | MS.gene006030:intron | 30.0% |
| ! | TTTTCCAAACTAAGAATGGT+AGG | - | chr1.3:66889423-66889442 | None:intergenic | 30.0% |
| !! | ACGTGAATTTGATTGTTTTG+TGG | + | chr1.3:66890083-66890102 | MS.gene006030:intron | 30.0% |
| !! | CGTGAATTTGATTGTTTTGT+GGG | + | chr1.3:66890084-66890103 | MS.gene006030:intron | 30.0% |
| !! | GAATCCTTAAATTTTTGGGA+AGG | + | chr1.3:66888302-66888321 | MS.gene006030:intron | 30.0% |
| !! | TACTTGGTTTTCTTCTTCTT+GGG | + | chr1.3:66888501-66888520 | MS.gene006030:intron | 30.0% |
| !! | TATATTCGCTTTATTTGCCA+TGG | + | chr1.3:66889733-66889752 | MS.gene006030:intron | 30.0% |
| !! | TTGAAGAGTGCTTTAAGTTA+AGG | + | chr1.3:66889011-66889030 | MS.gene006030:intron | 30.0% |
| !!! | TTGTGGGTTTATTTTTGTAG+GGG | + | chr1.3:66890100-66890119 | MS.gene006030:intron | 30.0% |
| AACATGATTCTCCAAGTACA+TGG | - | chr1.3:66887800-66887819 | None:intergenic | 35.0% | |
| AACTCTGTCTCAGATTATTG+AGG | + | chr1.3:66890385-66890404 | MS.gene006030:CDS | 35.0% | |
| AAGAATGGTAGGTAATAGAG+GGG | - | chr1.3:66889412-66889431 | None:intergenic | 35.0% | |
| AAGCTATTTAATATGAGGGG+TGG | + | chr1.3:66888901-66888920 | MS.gene006030:intron | 35.0% | |
| AATAAGATTACTCACGGTTC+CGG | - | chr1.3:66890037-66890056 | None:intergenic | 35.0% | |
| ACCTCAAAAAATACGGCTAA+AGG | - | chr1.3:66888984-66889003 | None:intergenic | 35.0% | |
| ACCTTCTTCAACAACAATAG+CGG | - | chr1.3:66886652-66886671 | None:intergenic | 35.0% | |
| AGATGAAGATGAAAGAGCTT+TGG | - | chr1.3:66886745-66886764 | None:intergenic | 35.0% | |
| AGTCCCTTCCCAAAAATTTA+AGG | - | chr1.3:66888309-66888328 | None:intergenic | 35.0% | |
| AGTGGGATAAGATAAGACAT+TGG | - | chr1.3:66889292-66889311 | None:intergenic | 35.0% | |
| CAAGAAGAAGAAAACCAAGT+AGG | - | chr1.3:66888502-66888521 | None:intergenic | 35.0% | |
| CATTCAACAGTAATGTCTTG+TGG | + | chr1.3:66889201-66889220 | MS.gene006030:intron | 35.0% | |
| CTAAGAATGGTAGGTAATAG+AGG | - | chr1.3:66889414-66889433 | None:intergenic | 35.0% | |
| CTGAAGAGATAACTTGAAGT+CGG | + | chr1.3:66889160-66889179 | MS.gene006030:intron | 35.0% | |
| GCTTCTAATCCAACGTAAAA+TGG | + | chr1.3:66888089-66888108 | MS.gene006030:intron | 35.0% | |
| GTTTAGTCTAGAGATTACCA+TGG | - | chr1.3:66889753-66889772 | None:intergenic | 35.0% | |
| TCGGAGCTTTCAAACATAAA+TGG | + | chr1.3:66888422-66888441 | MS.gene006030:intron | 35.0% | |
| TCTCTTGGATCAAATCAGAA+GGG | + | chr1.3:66886538-66886557 | MS.gene006030:CDS | 35.0% | |
| TCTTGTGGTCAGTTACAAAT+TGG | + | chr1.3:66889216-66889235 | MS.gene006030:intron | 35.0% | |
| TGAAGAGATAACTTGAAGTC+GGG | + | chr1.3:66889161-66889180 | MS.gene006030:intron | 35.0% | |
| TGGAGTTGGGACAAATTATT+GGG | + | chr1.3:66886958-66886977 | MS.gene006030:CDS | 35.0% | |
| ! | AGAGTGCTTTAAGTTAAGGT+TGG | + | chr1.3:66889015-66889034 | MS.gene006030:intron | 35.0% |
| ! | AGTACCGCTATTTGTTACAA+AGG | - | chr1.3:66889610-66889629 | None:intergenic | 35.0% |
| ! | ATGTGAACACCATTTTACGT+TGG | - | chr1.3:66888101-66888120 | None:intergenic | 35.0% |
| ! | ATTTTTGTAGGGGGCAATTA+TGG | + | chr1.3:66890110-66890129 | MS.gene006030:intron | 35.0% |
| ! | GTACCGCTATTTGTTACAAA+GGG | - | chr1.3:66889609-66889628 | None:intergenic | 35.0% |
| ! | GTATACCCAACTCTAAAAGT+AGG | - | chr1.3:66887164-66887183 | None:intergenic | 35.0% |
| ! | GTTAGCCAAACTTTTCTTCA+AGG | - | chr1.3:66888576-66888595 | None:intergenic | 35.0% |
| !! | AAATTTTTGGGAAGGGACTA+GGG | + | chr1.3:66888310-66888329 | MS.gene006030:intron | 35.0% |
| !! | ATGCAATCTTCAGTTTTGTC+AGG | - | chr1.3:66888849-66888868 | None:intergenic | 35.0% |
| !! | CTACTTGGTTTTCTTCTTCT+TGG | + | chr1.3:66888500-66888519 | MS.gene006030:intron | 35.0% |
| !! | CTGATTTCTGTTGTTTCTCT+AGG | + | chr1.3:66889892-66889911 | MS.gene006030:intron | 35.0% |
| !! | GTCATTGATTTCACCATTGT+AGG | - | chr1.3:66888536-66888555 | None:intergenic | 35.0% |
| !! | TAAATTTTTGGGAAGGGACT+AGG | + | chr1.3:66888309-66888328 | MS.gene006030:intron | 35.0% |
| !! | TGCAATCTTCAGTTTTGTCA+GGG | - | chr1.3:66888848-66888867 | None:intergenic | 35.0% |
| !!! | CGCTTTTTCCAAACTAAGAA+TGG | - | chr1.3:66889427-66889446 | None:intergenic | 35.0% |
| !!! | TCCTTTAGCCGTATTTTTTG+AGG | + | chr1.3:66888980-66888999 | MS.gene006030:intron | 35.0% |
| !!! | TGTGGGTTTATTTTTGTAGG+GGG | + | chr1.3:66890101-66890120 | MS.gene006030:intron | 35.0% |
| AAAAGATTACTCACGGTTCC+AGG | - | chr1.3:66889979-66889998 | None:intergenic | 40.0% | |
| AAGGAATTGAAGGTGGAGTT+GGG | + | chr1.3:66886945-66886964 | MS.gene006030:CDS | 40.0% | |
| AATTAGCAGGAGAGCTTATG+TGG | + | chr1.3:66889055-66889074 | MS.gene006030:intron | 40.0% | |
| ACAACAGAAATCAGTGAAGC+AGG | - | chr1.3:66889886-66889905 | None:intergenic | 40.0% | |
| ACTTGATGCTCTCTACAAGA+AGG | + | chr1.3:66887199-66887218 | MS.gene006030:CDS | 40.0% | |
| ACTTTCACTCTTTCCAACCT+GGG | + | chr1.3:66889916-66889935 | MS.gene006030:CDS | 40.0% | |
| AGAATGGTAGGTAATAGAGG+GGG | - | chr1.3:66889411-66889430 | None:intergenic | 40.0% | |
| AGTTTCAGCGAGAAATGCTA+TGG | - | chr1.3:66886697-66886716 | None:intergenic | 40.0% | |
| ATAAGATTACTCACGGTTCC+GGG | - | chr1.3:66890036-66890055 | None:intergenic | 40.0% | |
| ATCACCCTATGCGAAGAAAT+TGG | + | chr1.3:66886920-66886939 | MS.gene006030:CDS | 40.0% | |
| CAACAGAAATCAGTGAAGCA+GGG | - | chr1.3:66889885-66889904 | None:intergenic | 40.0% | |
| CTCTTGGATCAAATCAGAAG+GGG | + | chr1.3:66886539-66886558 | MS.gene006030:CDS | 40.0% | |
| CTGAAGGAATGCAAATTTGC+AGG | + | chr1.3:66890304-66890323 | MS.gene006030:intron | 40.0% | |
| GAAATTGGCGAAGGAATTGA+AGG | + | chr1.3:66886935-66886954 | MS.gene006030:CDS | 40.0% | |
| GAATGCTGTGAGTAGGAATA+TGG | + | chr1.3:66887121-66887140 | MS.gene006030:CDS | 40.0% | |
| GATCAGAACCGTAGATTACA+CGG | - | chr1.3:66890349-66890368 | None:intergenic | 40.0% | |
| GATGTCGAAACTTTCTACGA+CGG | + | chr1.3:66886618-66886637 | MS.gene006030:CDS | 40.0% | |
| GCATTCTGCATTGTCGTAAA+CGG | - | chr1.3:66887107-66887126 | None:intergenic | 40.0% | |
| GGAAACACAAGAATCCTACA+TGG | + | chr1.3:66889470-66889489 | MS.gene006030:intron | 40.0% | |
| GTCTAGAAAATGGAAGGAGT+TGG | + | chr1.3:66888169-66888188 | MS.gene006030:CDS | 40.0% | |
| GTCTCTTGGATCAAATCAGA+AGG | + | chr1.3:66886537-66886556 | MS.gene006030:CDS | 40.0% | |
| GTGGAGTTGGGACAAATTAT+TGG | + | chr1.3:66886957-66886976 | MS.gene006030:CDS | 40.0% | |
| GTTTCAGCGAGAAATGCTAT+GGG | - | chr1.3:66886696-66886715 | None:intergenic | 40.0% | |
| TACTTTCACTCTTTCCAACC+TGG | + | chr1.3:66889915-66889934 | MS.gene006030:CDS | 40.0% | |
| TAGCCTATGAAGCACAAACA+CGG | + | chr1.3:66887498-66887517 | MS.gene006030:intron | 40.0% | |
| TAGCTAGATGACTGTCACAT+TGG | + | chr1.3:66887287-66887306 | MS.gene006030:intron | 40.0% | |
| TCCAGTCTACAAAACCTACT+TGG | + | chr1.3:66888485-66888504 | MS.gene006030:intron | 40.0% | |
| TGGCATGAAGAATCAAATGC+AGG | + | chr1.3:66890182-66890201 | MS.gene006030:CDS | 40.0% | |
| TGTAGAATCTCAACCGAAGA+AGG | + | chr1.3:66886836-66886855 | MS.gene006030:intron | 40.0% | |
| TGTTTCAAAACATCCGGCTT+CGG | + | chr1.3:66886875-66886894 | MS.gene006030:CDS | 40.0% | |
| TTCGCCAATTTCTTCGCATA+GGG | - | chr1.3:66886927-66886946 | None:intergenic | 40.0% | |
| TTCTGTGAACACCATGTACT+TGG | + | chr1.3:66887786-66887805 | MS.gene006030:intron | 40.0% | |
| TTCTTCGGTTGAGATTCTAC+AGG | - | chr1.3:66886837-66886856 | None:intergenic | 40.0% | |
| TTGGGACAAATTATTGGGAC+TGG | + | chr1.3:66886963-66886982 | MS.gene006030:CDS | 40.0% | |
| ! | AATGTAATTTGTGGGGCTTC+TGG | + | chr1.3:66888676-66888695 | MS.gene006030:intron | 40.0% |
| ! | ACTGAAACTTTGGTCTTCCA+TGG | - | chr1.3:66889343-66889362 | None:intergenic | 40.0% |
| ! | ATGGAAGGAGTTGGTTGATA+AGG | + | chr1.3:66888178-66888197 | MS.gene006030:CDS | 40.0% |
| ! | GACATCCATGTCAGCTTTAT+CGG | - | chr1.3:66886604-66886623 | None:intergenic | 40.0% |
| ! | TAGGAATATGGTGGAGAGTT+TGG | + | chr1.3:66887133-66887152 | MS.gene006030:CDS | 40.0% |
| ! | TATGACAGCATTGCTTGCTA+AGG | + | chr1.3:66887893-66887912 | MS.gene006030:CDS | 40.0% |
| ! | TTGAAGCATTTGCAGCTACA+GGG | + | chr1.3:66887015-66887034 | MS.gene006030:CDS | 40.0% |
| !! | ACCAAGTAGGTTTTGTAGAC+TGG | - | chr1.3:66888489-66888508 | None:intergenic | 40.0% |
| !! | AGATGGTGGACTTATTACAC+CGG | + | chr1.3:66888022-66888041 | MS.gene006030:CDS | 40.0% |
| !! | GGCTGTTGTTTCAAAACATC+CGG | + | chr1.3:66886869-66886888 | MS.gene006030:CDS | 40.0% |
| !! | TGACTGTCACATTGGTTCTT+TGG | + | chr1.3:66887295-66887314 | MS.gene006030:intron | 40.0% |
| !!! | CGGTTCCTACTTTTAGAGTT+GGG | + | chr1.3:66887156-66887175 | MS.gene006030:CDS | 40.0% |
| !!! | GGGAAGCACCAATTTTAACT+CGG | - | chr1.3:66888828-66888847 | None:intergenic | 40.0% |
| AAATTTCGCGGATCTTAGCG+CGG | - | chr1.3:66886476-66886495 | None:intergenic | 45.0% | |
| AACAACGACACTATCGCCTT+TGG | - | chr1.3:66886574-66886593 | None:intergenic | 45.0% | |
| AACATCACAGCCAACTGTTG+TGG | + | chr1.3:66890140-66890159 | MS.gene006030:CDS | 45.0% | |
| ACGGCTAAAGGAACATCATC+AGG | - | chr1.3:66888972-66888991 | None:intergenic | 45.0% | |
| ACTGTTGTGGCTACTAAGGA+TGG | + | chr1.3:66890153-66890172 | MS.gene006030:CDS | 45.0% | |
| ACTTATTACACCGGTGCTTC+AGG | + | chr1.3:66888031-66888050 | MS.gene006030:CDS | 45.0% | |
| AGGTAATAGAGGGGGGAAAT+AGG | - | chr1.3:66889403-66889422 | None:intergenic | 45.0% | |
| ATTATTGGGACTGGACCTTC+AGG | + | chr1.3:66886972-66886991 | MS.gene006030:CDS | 45.0% | |
| ATTGGCGAAGGAATTGAAGG+TGG | + | chr1.3:66886938-66886957 | MS.gene006030:CDS | 45.0% | |
| CAACACGTCAATGACACATG+TGG | - | chr1.3:66887591-66887610 | None:intergenic | 45.0% | |
| CAATGCAGAATGCTGTGAGT+AGG | + | chr1.3:66887114-66887133 | MS.gene006030:CDS | 45.0% | |
| CGAATCCGATAAAGCTGACA+TGG | + | chr1.3:66886596-66886615 | MS.gene006030:CDS | 45.0% | |
| CTATGCGAAGAAATTGGCGA+AGG | + | chr1.3:66886926-66886945 | MS.gene006030:CDS | 45.0% | |
| CTGACCATACACAGAAGAGT+GGG | - | chr1.3:66889529-66889548 | None:intergenic | 45.0% | |
| CTTCGCCAATTTCTTCGCAT+AGG | - | chr1.3:66886928-66886947 | None:intergenic | 45.0% | |
| CTTTCCAACCTGGGAATGTT+TGG | + | chr1.3:66889925-66889944 | MS.gene006030:CDS | 45.0% | |
| GAAGGAATTGAAGGTGGAGT+TGG | + | chr1.3:66886944-66886963 | MS.gene006030:CDS | 45.0% | |
| GAATGGTAGGTAATAGAGGG+GGG | - | chr1.3:66889410-66889429 | None:intergenic | 45.0% | |
| GCAGATCACCGTGTAATCTA+CGG | + | chr1.3:66890338-66890357 | MS.gene006030:CDS | 45.0% | |
| GTACCTGTGGTGTATTCATG+AGG | - | chr1.3:66888224-66888243 | None:intergenic | 45.0% | |
| TCCTTAGTAGCCACAACAGT+TGG | - | chr1.3:66890153-66890172 | None:intergenic | 45.0% | |
| TCGTTACGAGAGAGTTACAC+AGG | + | chr1.3:66889449-66889468 | MS.gene006030:intron | 45.0% | |
| TGCTGTGAGTAGGAATATGG+TGG | + | chr1.3:66887124-66887143 | MS.gene006030:CDS | 45.0% | |
| TGTCCGTGTTTGTGCTTCAT+AGG | - | chr1.3:66887504-66887523 | None:intergenic | 45.0% | |
| TTATATACCGGCAGCCATGT+AGG | - | chr1.3:66889487-66889506 | None:intergenic | 45.0% | |
| TTATCAGCATCCTGAAGCAC+CGG | - | chr1.3:66888044-66888063 | None:intergenic | 45.0% | |
| TTATTGGGACTGGACCTTCA+GGG | + | chr1.3:66886973-66886992 | MS.gene006030:CDS | 45.0% | |
| TTTGATGCTATTCTGCCTCC+TGG | + | chr1.3:66889958-66889977 | MS.gene006030:CDS | 45.0% | |
| ! | CACATGTGTCATTGACGTGT+TGG | + | chr1.3:66887589-66887608 | MS.gene006030:intron | 45.0% |
| ! | CCAAGAGACGATTTTACCCT+CGG | - | chr1.3:66886526-66886545 | None:intergenic | 45.0% |
| ! | GAAGTGGTTTGTGGTTGAAG+TGG | - | chr1.3:66886448-66886467 | None:intergenic | 45.0% |
| ! | GAATATGGTGGAGAGTTTGG+CGG | + | chr1.3:66887136-66887155 | MS.gene006030:CDS | 45.0% |
| ! | GATTTTACCCTCGGTCATTG+TGG | - | chr1.3:66886517-66886536 | None:intergenic | 45.0% |
| ! | GCCGCTATTGTTGTTGAAGA+AGG | + | chr1.3:66886648-66886667 | MS.gene006030:CDS | 45.0% |
| ! | GTAGCTGGCCTAACTAAAGT+GGG | - | chr1.3:66889309-66889328 | None:intergenic | 45.0% |
| ! | GTGCTGGCATGAAAATTTCG+CGG | - | chr1.3:66886488-66886507 | None:intergenic | 45.0% |
| ! | GTTGAAGCATTTGCAGCTAC+AGG | + | chr1.3:66887014-66887033 | MS.gene006030:CDS | 45.0% |
| ! | TGGGCTAGATTCTCCTACAA+TGG | + | chr1.3:66888520-66888539 | MS.gene006030:intron | 45.0% |
| ! | TGTAGCTGGCCTAACTAAAG+TGG | - | chr1.3:66889310-66889329 | None:intergenic | 45.0% |
| ! | TGTCATTGACGTGTTGGTGT+TGG | + | chr1.3:66887595-66887614 | MS.gene006030:intron | 45.0% |
| !! | CGGTTTCTGGTGTTGAATTG+GGG | + | chr1.3:66887072-66887091 | MS.gene006030:CDS | 45.0% |
| !! | GCGGTTTCTGGTGTTGAATT+GGG | + | chr1.3:66887071-66887090 | MS.gene006030:CDS | 45.0% |
| !! | TGCGGTTTCTGGTGTTGAAT+TGG | + | chr1.3:66887070-66887089 | MS.gene006030:CDS | 45.0% |
| !! | TGTTGGACACTGACTCATGT+CGG | + | chr1.3:66887612-66887631 | MS.gene006030:intron | 45.0% |
| !!! | GCGGTTCCTACTTTTAGAGT+TGG | + | chr1.3:66887155-66887174 | MS.gene006030:CDS | 45.0% |
| !!! | ATCTTTTTTTTTTTTTTTTT+TGG | + | chr1.3:66889992-66890011 | MS.gene006030:intron | 5.0% |
| AACGCCAAACATTCCCAGGT+TGG | - | chr1.3:66889932-66889951 | None:intergenic | 50.0% | |
| ACCGAAGAAGGTTGTTGCAG+CGG | + | chr1.3:66886848-66886867 | MS.gene006030:CDS | 50.0% | |
| ACTCAGTTCCACAATGACCG+AGG | + | chr1.3:66886506-66886525 | MS.gene006030:CDS | 50.0% | |
| ACTGCCCACTCTTCTGTGTA+TGG | + | chr1.3:66889522-66889541 | MS.gene006030:intron | 50.0% | |
| AGATTACTCACGGTTCCAGG+AGG | - | chr1.3:66889976-66889995 | None:intergenic | 50.0% | |
| AGATTCTACAGGTGCAGGTG+TGG | - | chr1.3:66886826-66886845 | None:intergenic | 50.0% | |
| AGGAAGAGAGGAACGGTGTT+TGG | - | chr1.3:66886386-66886405 | None:intergenic | 50.0% | |
| CAAGAATCCTACATGGCTGC+CGG | + | chr1.3:66889477-66889496 | MS.gene006030:intron | 50.0% | |
| CAGCCTCATGAATACACCAC+AGG | + | chr1.3:66888218-66888237 | MS.gene006030:CDS | 50.0% | |
| CCGAGGGTAAAATCGTCTCT+TGG | + | chr1.3:66886523-66886542 | MS.gene006030:CDS | 50.0% | |
| CTCAGTTCCACAATGACCGA+GGG | + | chr1.3:66886507-66886526 | MS.gene006030:CDS | 50.0% | |
| CTTCAACAACAATAGCGGCG+AGG | - | chr1.3:66886647-66886666 | None:intergenic | 50.0% | |
| GAAGGGGACAAACTCTCCAA+AGG | + | chr1.3:66886555-66886574 | MS.gene006030:CDS | 50.0% | |
| GATCAACGCCAAACATTCCC+AGG | - | chr1.3:66889936-66889955 | None:intergenic | 50.0% | |
| GATTCTACAGGTGCAGGTGT+GGG | - | chr1.3:66886825-66886844 | None:intergenic | 50.0% | |
| GCCAACTGTTGTGGCTACTA+AGG | + | chr1.3:66890149-66890168 | MS.gene006030:CDS | 50.0% | |
| GCTACTAAGGATGGTCGCAT+TGG | + | chr1.3:66890162-66890181 | MS.gene006030:CDS | 50.0% | |
| GCTGACCATACACAGAAGAG+TGG | - | chr1.3:66889530-66889549 | None:intergenic | 50.0% | |
| GGTGCTTCAGGATGCTGATA+AGG | + | chr1.3:66888043-66888062 | MS.gene006030:CDS | 50.0% | |
| GGTTGAAGTGGTGCGGTAAA+GGG | - | chr1.3:66886436-66886455 | None:intergenic | 50.0% | |
| GGTTGAGATTCTACAGGTGC+AGG | - | chr1.3:66886831-66886850 | None:intergenic | 50.0% | |
| GGTTTGTGGTTGAAGTGGTG+CGG | - | chr1.3:66886443-66886462 | None:intergenic | 50.0% | |
| GTCATTGTGGAACTGAGTGC+TGG | - | chr1.3:66886504-66886523 | None:intergenic | 50.0% | |
| TAGGGGGCAATTATGGCAGT+TGG | + | chr1.3:66890117-66890136 | MS.gene006030:intron | 50.0% | |
| TCAAAACATCCGGCTTCGGA+GGG | + | chr1.3:66886879-66886898 | MS.gene006030:CDS | 50.0% | |
| TGCAGGAGAAGGAGAAGTAG+AGG | - | chr1.3:66886784-66886803 | None:intergenic | 50.0% | |
| TGCTATGGGAGATCCAACAG+CGG | - | chr1.3:66886682-66886701 | None:intergenic | 50.0% | |
| TGGTTGAAGTGGTGCGGTAA+AGG | - | chr1.3:66886437-66886456 | None:intergenic | 50.0% | |
| TTCAAAACATCCGGCTTCGG+AGG | + | chr1.3:66886878-66886897 | MS.gene006030:CDS | 50.0% | |
| ! | AATTTGTGGGGCTTCTGGAG+TGG | + | chr1.3:66888681-66888700 | MS.gene006030:intron | 50.0% |
| ! | TGGTGTTGAATTGGGGACTG+TGG | + | chr1.3:66887079-66887098 | MS.gene006030:CDS | 50.0% |
| ACGGTGGAGGAAGAGAGGAA+CGG | - | chr1.3:66886393-66886412 | None:intergenic | 55.0% | |
| ATAACAAGAGGGCCGAAGCC+CGG | + | chr1.3:66890015-66890034 | MS.gene006030:intron | 55.0% | |
| ATGGAGTCGACACGTGTAGC+TGG | - | chr1.3:66889324-66889343 | None:intergenic | 55.0% | |
| CATCAGCATTGCAGTCGCTG+TGG | + | chr1.3:66887995-66888014 | MS.gene006030:CDS | 55.0% | |
| CCAGAAACCGCAGTCTTCAC+CGG | - | chr1.3:66887062-66887081 | None:intergenic | 55.0% | |
| GCAGTCGCTGTGGCTATAGA+TGG | + | chr1.3:66888005-66888024 | MS.gene006030:CDS | 55.0% | |
| GCCGCTGCAACAACCTTCTT+CGG | - | chr1.3:66886852-66886871 | None:intergenic | 55.0% | |
| GTCGCTGTGGCTATAGATGG+TGG | + | chr1.3:66888008-66888027 | MS.gene006030:CDS | 55.0% | |
| TGAAGTGGTGCGGTAAAGGG+AGG | - | chr1.3:66886433-66886452 | None:intergenic | 55.0% | |
| TTACTCACGGTTCCGGGCTT+CGG | - | chr1.3:66890030-66890049 | None:intergenic | 55.0% | |
| TTAGCCACAACCCTCCCTGA+AGG | - | chr1.3:66886990-66887009 | None:intergenic | 55.0% | |
| !! | AGCTACACGTGTCGACTCCA+TGG | + | chr1.3:66889323-66889342 | MS.gene006030:intron | 55.0% |
| !! | TGCAGCTACAGGGAGTGTTG+CGG | + | chr1.3:66887025-66887044 | MS.gene006030:CDS | 55.0% |
| AAACATCCGGCTTCGGAGGG+AGG | + | chr1.3:66886882-66886901 | MS.gene006030:CDS | 60.0% | |
| AACATCCGGCTTCGGAGGGA+GGG | + | chr1.3:66886883-66886902 | MS.gene006030:CDS | 60.0% | |
| AGGCTGCAGCTGCTTAGCTC+TGG | - | chr1.3:66888204-66888223 | None:intergenic | 60.0% | |
| CCGGTGAAGACTGCGGTTTC+TGG | + | chr1.3:66887059-66887078 | MS.gene006030:CDS | 60.0% | |
| CTTGAAGTCGGGTGCAGCTG+TGG | + | chr1.3:66889172-66889191 | MS.gene006030:intron | 60.0% | |
| GAAGGTGATGTCGCCGCTGT+TGG | + | chr1.3:66886666-66886685 | MS.gene006030:intron | 60.0% | |
| GCGGACGACGAAGTGGTTTG+TGG | - | chr1.3:66886457-66886476 | None:intergenic | 60.0% | |
| TAAGGCTACAGCACTCGCGC+TGG | + | chr1.3:66887911-66887930 | MS.gene006030:CDS | 60.0% | |
| TACAGGTGCAGGTGTGGGTG+CGG | - | chr1.3:66886820-66886839 | None:intergenic | 60.0% | |
| TCTTAGCGCGGACGACGAAG+TGG | - | chr1.3:66886464-66886483 | None:intergenic | 60.0% | |
| TGGACCTTCAGGGAGGGTTG+TGG | + | chr1.3:66886983-66887002 | MS.gene006030:CDS | 60.0% | |
| TGGGACTGGACCTTCAGGGA+GGG | + | chr1.3:66886977-66886996 | MS.gene006030:CDS | 60.0% | |
| TGGTGCGGTAAAGGGAGGTG+CGG | - | chr1.3:66886428-66886447 | None:intergenic | 60.0% | |
| TTCGGAGGGAGGGAAGAGAG+TGG | + | chr1.3:66886893-66886912 | MS.gene006030:CDS | 60.0% | |
| TTGGGACTGGACCTTCAGGG+AGG | + | chr1.3:66886976-66886995 | MS.gene006030:CDS | 60.0% | |
| ! | GGTAAAGGGAGGTGCGGTTG+CGG | - | chr1.3:66886422-66886441 | None:intergenic | 60.0% |
| !! | AGCTACAGGGAGTGTTGCGG+CGG | + | chr1.3:66887028-66887047 | MS.gene006030:CDS | 60.0% |
| ACAGGTGCAGGTGTGGGTGC+GGG | - | chr1.3:66886819-66886838 | None:intergenic | 65.0% | |
| AGCGGAGCCGGTGAAGACTG+CGG | + | chr1.3:66887052-66887071 | MS.gene006030:CDS | 65.0% | |
| CTCTTCCCTCCCTCCGAAGC+CGG | - | chr1.3:66886891-66886910 | None:intergenic | 65.0% | |
| GGAGGACGGTGGAGGAAGAG+AGG | - | chr1.3:66886398-66886417 | None:intergenic | 65.0% | |
| GGAGGGAGGGAAGAGAGTGG+TGG | + | chr1.3:66886896-66886915 | MS.gene006030:CDS | 65.0% | |
| ! | AAAGGGAGGTGCGGTTGCGG+CGG | - | chr1.3:66886419-66886438 | None:intergenic | 65.0% |
| ! | GCAGGTGAGGGTGCAGGAGA+AGG | - | chr1.3:66886795-66886814 | None:intergenic | 65.0% |
| GTGGGTGCGGGTGCAGGTGA+GGG | - | chr1.3:66886807-66886826 | None:intergenic | 70.0% | |
| TGTGGGTGCGGGTGCAGGTG+AGG | - | chr1.3:66886808-66886827 | None:intergenic | 70.0% | |
| !! | AGGGAGTGTTGCGGCGGCAG+CGG | + | chr1.3:66887034-66887053 | MS.gene006030:CDS | 70.0% |
| GCAGGTGTGGGTGCGGGTGC+AGG | - | chr1.3:66886813-66886832 | None:intergenic | 75.0% | |
| GGTGCGGTTGCGGCGGAGGA+CGG | - | chr1.3:66886412-66886431 | None:intergenic | 75.0% | |
| GTTGCGGCGGAGGACGGTGG+AGG | - | chr1.3:66886406-66886425 | None:intergenic | 75.0% | |
| TGTTGCGGCGGCAGCGGAGC+CGG | + | chr1.3:66887040-66887059 | MS.gene006030:CDS | 75.0% | |
| ! | GCGGGTGCAGGTGAGGGTGC+AGG | - | chr1.3:66886801-66886820 | None:intergenic | 75.0% |
| ! | GCGGTTGCGGCGGAGGACGG+TGG | - | chr1.3:66886409-66886428 | None:intergenic | 80.0% |
| !! | GGGAGGTGCGGTTGCGGCGG+AGG | - | chr1.3:66886416-66886435 | None:intergenic | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.3 | gene | 66886369 | 66890430 | 66886369 | ID=MS.gene006030 |
| chr1.3 | mRNA | 66886369 | 66890430 | 66886369 | ID=MS.gene006030.t1;Parent=MS.gene006030 |
| chr1.3 | exon | 66886369 | 66886669 | 66886369 | ID=MS.gene006030.t1.exon1;Parent=MS.gene006030.t1 |
| chr1.3 | CDS | 66886369 | 66886669 | 66886369 | ID=cds.MS.gene006030.t1;Parent=MS.gene006030.t1 |
| chr1.3 | exon | 66886841 | 66887220 | 66886841 | ID=MS.gene006030.t1.exon2;Parent=MS.gene006030.t1 |
| chr1.3 | CDS | 66886841 | 66887220 | 66886841 | ID=cds.MS.gene006030.t1;Parent=MS.gene006030.t1 |
| chr1.3 | exon | 66887873 | 66888064 | 66887873 | ID=MS.gene006030.t1.exon3;Parent=MS.gene006030.t1 |
| chr1.3 | CDS | 66887873 | 66888064 | 66887873 | ID=cds.MS.gene006030.t1;Parent=MS.gene006030.t1 |
| chr1.3 | exon | 66888152 | 66888239 | 66888152 | ID=MS.gene006030.t1.exon4;Parent=MS.gene006030.t1 |
| chr1.3 | CDS | 66888152 | 66888239 | 66888152 | ID=cds.MS.gene006030.t1;Parent=MS.gene006030.t1 |
| chr1.3 | exon | 66889914 | 66889984 | 66889914 | ID=MS.gene006030.t1.exon5;Parent=MS.gene006030.t1 |
| chr1.3 | CDS | 66889914 | 66889984 | 66889914 | ID=cds.MS.gene006030.t1;Parent=MS.gene006030.t1 |
| chr1.3 | exon | 66890120 | 66890203 | 66890120 | ID=MS.gene006030.t1.exon6;Parent=MS.gene006030.t1 |
| chr1.3 | CDS | 66890120 | 66890203 | 66890120 | ID=cds.MS.gene006030.t1;Parent=MS.gene006030.t1 |
| chr1.3 | exon | 66890326 | 66890430 | 66890326 | ID=MS.gene006030.t1.exon7;Parent=MS.gene006030.t1 |
| chr1.3 | CDS | 66890326 | 66890430 | 66890326 | ID=cds.MS.gene006030.t1;Parent=MS.gene006030.t1 |
| Gene Sequence |
| Protein sequence |
