Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene006381.t1 | XP_013469727.1 | 98.7 | 465 | 6 | 0 | 1 | 465 | 1 | 465 | 4.00E-274 | 953.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene006381.t1 | Q9LIK9 | 81.5 | 465 | 84 | 1 | 1 | 465 | 1 | 463 | 4.8e-228 | 791.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene006381.t1 | A0A072W0C8 | 98.7 | 465 | 6 | 0 | 1 | 465 | 1 | 465 | 2.9e-274 | 953.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene070980 | MS.gene006381 | PPI |
| MS.gene37159 | MS.gene006381 | PPI |
| MS.gene006381 | MS.gene34410 | PPI |
| MS.gene006381 | MS.gene018229 | PPI |
| MS.gene37680 | MS.gene006381 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene006381.t1 | MTR_1g102550 | 98.710 | 465 | 6 | 0 | 1 | 465 | 1 | 465 | 0.0 | 945 |
| MS.gene006381.t1 | MTR_6g016335 | 75.887 | 423 | 102 | 0 | 38 | 460 | 60 | 482 | 0.0 | 681 |
| MS.gene006381.t1 | MTR_6g016325 | 72.449 | 98 | 27 | 0 | 363 | 460 | 30 | 127 | 6.12e-46 | 156 |
| MS.gene006381.t1 | MTR_6g016320 | 95.082 | 61 | 3 | 0 | 304 | 364 | 12 | 72 | 1.97e-36 | 129 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene006381.t1 | AT3G22890 | 81.505 | 465 | 84 | 1 | 1 | 465 | 1 | 463 | 0.0 | 785 |
| MS.gene006381.t1 | AT4G14680 | 78.205 | 468 | 96 | 3 | 1 | 465 | 1 | 465 | 0.0 | 753 |
| MS.gene006381.t1 | AT5G43780 | 77.371 | 464 | 103 | 2 | 2 | 463 | 3 | 466 | 0.0 | 738 |
| MS.gene006381.t1 | AT4G14680 | 77.262 | 431 | 92 | 3 | 1 | 428 | 1 | 428 | 0.0 | 676 |
| MS.gene006381.t1 | AT1G19920 | 76.658 | 407 | 95 | 0 | 45 | 451 | 57 | 463 | 0.0 | 676 |
Find 156 sgRNAs with CRISPR-Local
Find 258 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCCTAAACATTCTTCCTTTC+AGG | 0.110980 | 1.3:-70423779 | MS.gene006381:CDS |
| CCGCAAGCGGCTTCTTGATA+TGG | 0.186607 | 1.3:-70424622 | MS.gene006381:CDS |
| CGAGCTATCCTTTCTTCTTT+AGG | 0.220343 | 1.3:+70424891 | None:intergenic |
| CTCTGATGGGAGGGGCAAAA+TGG | 0.227116 | 1.3:+70426501 | None:intergenic |
| GTGAGAAGGGAAAGAGGTTT+TGG | 0.256344 | 1.3:+70426547 | None:intergenic |
| CAAGATTTCGTCTTCATATC+AGG | 0.277442 | 1.3:-70423616 | MS.gene006381:CDS |
| TCTGAGTTTCTGATTGGTTC+TGG | 0.283516 | 1.3:+70426454 | None:intergenic |
| CTATAACTAATGCTGGAAAT+TGG | 0.315885 | 1.3:-70424824 | MS.gene006381:CDS |
| ATCCTCTTGCTTCATCCACT+TGG | 0.327829 | 1.3:-70424585 | MS.gene006381:CDS |
| GTGCATGGGAGACGGGAATA+TGG | 0.342460 | 1.3:+70423974 | None:intergenic |
| GTGAATTGAAATGAAGCGTT+TGG | 0.352161 | 1.3:+70426231 | None:intergenic |
| TCCTCTTGCTTCATCCACTT+GGG | 0.354000 | 1.3:-70424584 | MS.gene006381:CDS |
| CACTAGACCGGAACAGGTTC+CGG | 0.365121 | 1.3:+70423305 | None:intergenic |
| TTTCAAAGATTGATGTTGAA+TGG | 0.369904 | 1.3:-70426319 | MS.gene006381:CDS |
| TTCAAGCAATGGCAAAGTTC+CGG | 0.370171 | 1.3:-70423324 | MS.gene006381:CDS |
| ACGAAATCTTGAGGCCTTGA+TGG | 0.373728 | 1.3:+70423628 | None:intergenic |
| GGCCATTGTGGACAGGATTC+CGG | 0.375621 | 1.3:+70424667 | None:intergenic |
| CAAAGTTCCGGAACCTGTTC+CGG | 0.376156 | 1.3:-70423312 | MS.gene006381:CDS |
| AAAATGGGTATCAAACGTTT+TGG | 0.377383 | 1.3:+70426517 | None:intergenic |
| AGCATTAGTTATAGTTTCTT+CGG | 0.377760 | 1.3:+70424833 | None:intergenic |
| GTTATAGTTTCTTCGGCATA+AGG | 0.383634 | 1.3:+70424840 | None:intergenic |
| CATATCAAGAAGCCGCTTGC+GGG | 0.394862 | 1.3:+70424623 | None:intergenic |
| TACTCTTTGAGAATGGCAAC+AGG | 0.396818 | 1.3:+70426086 | None:intergenic |
| CGCAAGCGGCTTCTTGATAT+GGG | 0.397191 | 1.3:-70424621 | MS.gene006381:CDS |
| TTCATCCGGTTTGATTGAAC+CGG | 0.402859 | 1.3:-70426429 | MS.gene006381:CDS |
| TGAACCGGATGGTGGAAAAT+TGG | 0.405429 | 1.3:-70426414 | MS.gene006381:CDS |
| CCTAAACATTCTTCCTTTCA+GGG | 0.410178 | 1.3:-70423778 | MS.gene006381:intron |
| GATTTATGTGCCCTGGTGGC+TGG | 0.411095 | 1.3:-70423382 | MS.gene006381:CDS |
| CTGTGTTTGCGTTCCAGCTC+CGG | 0.416559 | 1.3:-70424686 | MS.gene006381:CDS |
| CGGTCGAGACCCTGCAGGCA+TGG | 0.417387 | 1.3:-70423880 | MS.gene006381:CDS |
| AAGAAAGGATAGCTCGGACT+TGG | 0.417849 | 1.3:-70424884 | MS.gene006381:CDS |
| TTCAAAGATTGATGTTGAAT+GGG | 0.419355 | 1.3:-70426318 | MS.gene006381:CDS |
| ATCAGAGTCAACGTAGCAAT+TGG | 0.420035 | 1.3:-70426485 | MS.gene006381:CDS |
| AGAAAGGATAGCTCGGACTT+GGG | 0.421513 | 1.3:-70424883 | MS.gene006381:CDS |
| CTGATGATGTCCCTCTTGAT+TGG | 0.423972 | 1.3:-70424548 | MS.gene006381:CDS |
| ACAGGATGGCCCATGCCTGC+AGG | 0.424384 | 1.3:+70423870 | None:intergenic |
| AATGCTGGAAATTGGTTGAT+TGG | 0.426694 | 1.3:-70424816 | MS.gene006381:CDS |
| GAGAGAGTGAGAAGGGAAAG+AGG | 0.428871 | 1.3:+70426541 | None:intergenic |
| AAGCCCATCATGATACTTGA+TGG | 0.430211 | 1.3:+70424770 | None:intergenic |
| TCTGATGGGAGGGGCAAAAT+GGG | 0.437230 | 1.3:+70426502 | None:intergenic |
| TGAAACTCTGAGTTTCTGAT+TGG | 0.437359 | 1.3:+70426448 | None:intergenic |
| ATACAACACTAGACCGGAAC+AGG | 0.442459 | 1.3:+70423299 | None:intergenic |
| TATGTCTGTTCCGATTGTTT+TGG | 0.445173 | 1.3:-70426180 | MS.gene006381:CDS |
| TGTGGACAGGATTCCGGAGC+TGG | 0.447826 | 1.3:+70424673 | None:intergenic |
| ATCTTTGAAAGCTTTATCCT+TGG | 0.450558 | 1.3:+70426332 | None:intergenic |
| GATCTTTCTTTAGGTACTTG+AGG | 0.454226 | 1.3:-70424030 | MS.gene006381:intron |
| GGTATCTTACTCTTTGAGAA+TGG | 0.454494 | 1.3:+70426079 | None:intergenic |
| CACACCTTCAATGGCTTCCA+TGG | 0.454764 | 1.3:-70426582 | None:intergenic |
| GGTCGAGACCCTGCAGGCAT+GGG | 0.458137 | 1.3:-70423879 | MS.gene006381:CDS |
| CCCTGAAAGGAAGAATGTTT+AGG | 0.461067 | 1.3:+70423778 | None:intergenic |
| CAATACTTTCTTTCCGTGGT+CGG | 0.462303 | 1.3:+70423824 | None:intergenic |
| CCTGATGGATTTATGTGCCC+TGG | 0.467387 | 1.3:-70423389 | MS.gene006381:CDS |
| AAGAGGGACATCATCAGCTT+TGG | 0.467660 | 1.3:+70424554 | None:intergenic |
| TTTCTTTAGGTACTTGAGGA+TGG | 0.469913 | 1.3:-70424026 | MS.gene006381:intron |
| ACCATCCGGTTCAATCAAAC+CGG | 0.472422 | 1.3:+70426424 | None:intergenic |
| ATGGACACAACTGTTGTCTC+TGG | 0.474500 | 1.3:+70423993 | None:intergenic |
| CAGAAACTCAGAGTTTCATC+CGG | 0.475836 | 1.3:-70426443 | MS.gene006381:CDS |
| GAAGAAACTATAACTAATGC+TGG | 0.479156 | 1.3:-70424831 | MS.gene006381:CDS |
| CCGTCTCCCATGCACTATGC+TGG | 0.482401 | 1.3:-70423966 | MS.gene006381:CDS |
| GGGGCAAACTTCTACATTGT+CGG | 0.482523 | 1.3:-70423900 | MS.gene006381:CDS |
| AATTCACTTAGACTCAATGA+TGG | 0.483643 | 1.3:-70426215 | MS.gene006381:CDS |
| ATGTTTAGGCGCTCGAGTCC+AGG | 0.484149 | 1.3:+70423792 | None:intergenic |
| GCATGCCACTGCACCTCAGT+TGG | 0.486147 | 1.3:+70423942 | None:intergenic |
| AGTTTAGTGCTTTCAAGCAA+TGG | 0.487220 | 1.3:-70423335 | MS.gene006381:CDS |
| GGGTGGGCTACCCCACTTGG+TGG | 0.489758 | 1.3:-70426278 | MS.gene006381:CDS |
| TCTTCGGCATAAGGCAGGCC+GGG | 0.491192 | 1.3:+70424849 | None:intergenic |
| AATTGCTACGTTGACTCTGA+TGG | 0.492558 | 1.3:+70426487 | None:intergenic |
| GCAAAGGCTAGGATCAATGC+TGG | 0.493443 | 1.3:-70423921 | MS.gene006381:CDS |
| GAAGGGTGGGCTACCCCACT+TGG | 0.502913 | 1.3:-70426281 | MS.gene006381:CDS |
| TTCTTCGGCATAAGGCAGGC+CGG | 0.503309 | 1.3:+70424848 | None:intergenic |
| CCTCTTGCTTCATCCACTTG+GGG | 0.504239 | 1.3:-70424583 | MS.gene006381:CDS |
| TAGTTTCTTCGGCATAAGGC+AGG | 0.506724 | 1.3:+70424844 | None:intergenic |
| AAGAAGCCGCTTGCGGGTAT+CGG | 0.507237 | 1.3:+70424629 | None:intergenic |
| CAGCATAGTGCATGGGAGAC+GGG | 0.510140 | 1.3:+70423967 | None:intergenic |
| AACTCATCACGGAGTTCTGA+AGG | 0.511645 | 1.3:+70424729 | None:intergenic |
| TGCTCAATACTTTCTTTCCG+TGG | 0.512487 | 1.3:+70423820 | None:intergenic |
| TTCATGTGCTGAGTGAAGGG+TGG | 0.514044 | 1.3:-70426295 | MS.gene006381:CDS |
| TCATCAATAGCCAAAACAAT+CGG | 0.518346 | 1.3:+70426170 | None:intergenic |
| CCAGGGCACATAAATCCATC+AGG | 0.520870 | 1.3:+70423389 | None:intergenic |
| TGGCATTCTTTGATCCATCA+AGG | 0.522843 | 1.3:-70423642 | MS.gene006381:CDS |
| CAGGATGGCCCATGCCTGCA+GGG | 0.525821 | 1.3:+70423871 | None:intergenic |
| TCATGTGCTGAGTGAAGGGT+GGG | 0.527216 | 1.3:-70426294 | MS.gene006381:CDS |
| AATTGAAATGAAGCGTTTGG+AGG | 0.528583 | 1.3:+70426234 | None:intergenic |
| CAAAGGCTAGGATCAATGCT+GGG | 0.528599 | 1.3:-70423920 | MS.gene006381:CDS |
| ATAAGCATCCTAAAGAAGAA+AGG | 0.528895 | 1.3:-70424899 | MS.gene006381:CDS |
| ACTAGCACCTTCCAGCCACC+AGG | 0.530061 | 1.3:+70423371 | None:intergenic |
| TGCTGCTTATGACAAGACTC+AGG | 0.532676 | 1.3:-70423671 | MS.gene006381:CDS |
| GAACCCATCAAGTATCATGA+TGG | 0.533542 | 1.3:-70424774 | MS.gene006381:CDS |
| AAAGCATGGCCATTGTGGAC+AGG | 0.534971 | 1.3:+70424660 | None:intergenic |
| CCAGCATAGTGCATGGGAGA+CGG | 0.537239 | 1.3:+70423966 | None:intergenic |
| TGACAAGACTCAGGGTAAGA+TGG | 0.539176 | 1.3:-70423662 | MS.gene006381:CDS |
| AGTTCATCAATTACCCTGAA+AGG | 0.541572 | 1.3:+70423765 | None:intergenic |
| TGATGGGTTCTATAACCTCT+AGG | 0.543315 | 1.3:+70424787 | None:intergenic |
| CTAAAGAAGAAAGGATAGCT+CGG | 0.547383 | 1.3:-70424890 | MS.gene006381:CDS |
| AACAAAGAAAGTCCTCCTGA+TGG | 0.550290 | 1.3:-70423404 | MS.gene006381:CDS |
| AAAGTATTGAGCATGGCACC+TGG | 0.552120 | 1.3:-70423810 | MS.gene006381:CDS |
| TTTGGACAAAAGGGTAGCCA+TGG | 0.552527 | 1.3:+70426565 | None:intergenic |
| TATGTGCCCTGGTGGCTGGA+AGG | 0.556507 | 1.3:-70423378 | MS.gene006381:CDS |
| CTACGTTGACTCTGATGGGA+GGG | 0.561987 | 1.3:+70426492 | None:intergenic |
| ATTGTCGGTCGAGACCCTGC+AGG | 0.563143 | 1.3:-70423885 | MS.gene006381:CDS |
| GAAAGGATAGCTCGGACTTG+GGG | 0.563416 | 1.3:-70424882 | MS.gene006381:CDS |
| ACTTGGGGAACAACTGCTCC+CGG | 0.563450 | 1.3:-70424867 | MS.gene006381:CDS |
| TCCGGTTTGATTGAACCGGA+TGG | 0.563694 | 1.3:-70426425 | MS.gene006381:CDS |
| GAGAATGAAACAACATGAGA+AGG | 0.566866 | 1.3:-70424526 | MS.gene006381:intron |
| ATTGCTACGTTGACTCTGAT+GGG | 0.567247 | 1.3:+70426488 | None:intergenic |
| CTCTCATGAAACCACCAAGT+GGG | 0.567308 | 1.3:+70426267 | None:intergenic |
| CTCTTGCTTCATCCACTTGG+GGG | 0.575679 | 1.3:-70424582 | MS.gene006381:CDS |
| TACGTTGACTCTGATGGGAG+GGG | 0.576534 | 1.3:+70426493 | None:intergenic |
| TGGGTTCATGTGCTGAGTGA+AGG | 0.577966 | 1.3:-70426299 | MS.gene006381:CDS |
| ATTAAAATACAACACTAGAC+CGG | 0.582109 | 1.3:+70423293 | None:intergenic |
| TGCAGATGCGAACACTTGCT+AGG | 0.583416 | 1.3:-70423427 | MS.gene006381:intron |
| GCGAAGCTTTATCATTGCCA+AGG | 0.584948 | 1.3:-70426349 | MS.gene006381:CDS |
| AACCCATCAAGTATCATGAT+GGG | 0.586308 | 1.3:-70424773 | MS.gene006381:CDS |
| GTTGGTCCAGCATAGTGCAT+GGG | 0.590516 | 1.3:+70423960 | None:intergenic |
| ATTCACTTAGACTCAATGAT+GGG | 0.594320 | 1.3:-70426214 | MS.gene006381:CDS |
| GGTTTGATTGAACCGGATGG+TGG | 0.596506 | 1.3:-70426422 | MS.gene006381:CDS |
| AGCCCATCATGATACTTGAT+GGG | 0.597356 | 1.3:+70424771 | None:intergenic |
| GGGTTCATGTGCTGAGTGAA+GGG | 0.599411 | 1.3:-70426298 | MS.gene006381:CDS |
| GCTGGAAATTGGTTGATTGG+TGG | 0.600582 | 1.3:-70424813 | MS.gene006381:CDS |
| AGTTGGTCCAGCATAGTGCA+TGG | 0.601513 | 1.3:+70423959 | None:intergenic |
| CCATATCAAGAAGCCGCTTG+CGG | 0.602478 | 1.3:+70424622 | None:intergenic |
| GTTTCATTCTCCAATCAAGA+GGG | 0.604184 | 1.3:+70424538 | None:intergenic |
| TGCAGTGGCATGCAAAGGCT+AGG | 0.605138 | 1.3:-70423932 | MS.gene006381:CDS |
| TGTTTCATTCTCCAATCAAG+AGG | 0.605490 | 1.3:+70424537 | None:intergenic |
| TGAGGTGCAGTGGCATGCAA+AGG | 0.611774 | 1.3:-70423937 | MS.gene006381:CDS |
| TTAGCAAAGCATGGCCATTG+TGG | 0.614348 | 1.3:+70424655 | None:intergenic |
| AGTGGATGAAGCAAGAGGAT+CGG | 0.620500 | 1.3:+70424588 | None:intergenic |
| CTGGAACGCAAACACAGCAT+CGG | 0.624640 | 1.3:+70424692 | None:intergenic |
| CGTCTTCATATCAGGCACAA+AGG | 0.625919 | 1.3:-70423608 | MS.gene006381:intron |
| TATCGGTCATTAGCAAAGCA+TGG | 0.627110 | 1.3:+70424646 | None:intergenic |
| TGGAAAATTGGTAGAGCTTG+TGG | 0.628005 | 1.3:-70426402 | MS.gene006381:CDS |
| ACTCATCACGGAGTTCTGAA+GGG | 0.630273 | 1.3:+70424730 | None:intergenic |
| AACTCCGTGATGAGTTCACA+AGG | 0.634078 | 1.3:-70424722 | MS.gene006381:CDS |
| CTCATCACGGAGTTCTGAAG+GGG | 0.634921 | 1.3:+70424731 | None:intergenic |
| TGCGCCTTGTGAACTCATCA+CGG | 0.635019 | 1.3:+70424718 | None:intergenic |
| GATGGATTTATGTGCCCTGG+TGG | 0.643053 | 1.3:-70423386 | MS.gene006381:CDS |
| ACTCTTTGAGAATGGCAACA+GGG | 0.643983 | 1.3:+70426087 | None:intergenic |
| CTCCGGAATCCTGTCCACAA+TGG | 0.646104 | 1.3:-70424669 | MS.gene006381:CDS |
| TCTCATGAAACCACCAAGTG+GGG | 0.649285 | 1.3:+70426268 | None:intergenic |
| CGGAAAGAAAGTATTGAGCA+TGG | 0.652115 | 1.3:-70423817 | MS.gene006381:CDS |
| CTGGACCAACTGAGGTGCAG+TGG | 0.655057 | 1.3:-70423947 | MS.gene006381:CDS |
| TCTCTCATGAAACCACCAAG+TGG | 0.655442 | 1.3:+70426266 | None:intergenic |
| CCCCAAGTGGATGAAGCAAG+AGG | 0.656771 | 1.3:+70424583 | None:intergenic |
| TTGATGATGATCAGAAACAT+CGG | 0.659323 | 1.3:-70426154 | MS.gene006381:CDS |
| CTAGCACCTTCCAGCCACCA+GGG | 0.661333 | 1.3:+70423372 | None:intergenic |
| GATGATCAGAAACATCGGAT+CGG | 0.661345 | 1.3:-70426149 | MS.gene006381:CDS |
| TAATGACCGATACCCGCAAG+CGG | 0.664200 | 1.3:-70424635 | MS.gene006381:CDS |
| GCTGCTTATGACAAGACTCA+GGG | 0.667419 | 1.3:-70423670 | MS.gene006381:CDS |
| GCTACGTTGACTCTGATGGG+AGG | 0.667478 | 1.3:+70426491 | None:intergenic |
| GATCTGTATGATGCCGACCA+CGG | 0.670228 | 1.3:-70423837 | MS.gene006381:CDS |
| GATATGAAGACGAAATCTTG+AGG | 0.673263 | 1.3:+70423619 | None:intergenic |
| GTTGATTGGTGGTGACCTAG+AGG | 0.677209 | 1.3:-70424802 | MS.gene006381:CDS |
| AAAGGCTAGGATCAATGCTG+GGG | 0.690474 | 1.3:-70423919 | MS.gene006381:CDS |
| AAAATTGGTAGAGCTTGTGG+TGG | 0.695154 | 1.3:-70426399 | MS.gene006381:CDS |
| GCACTATGCTGGACCAACTG+AGG | 0.705349 | 1.3:-70423955 | MS.gene006381:CDS |
| GGGCACATAAATCCATCAGG+AGG | 0.714670 | 1.3:+70423392 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAAAAATAAAATAAAAAAGG+AGG | + | chr1.3:70424398-70424417 | None:intergenic | 10.0% |
| !!! | AATTTATTTTTGTATTTGTT+TGG | + | chr1.3:70424592-70424611 | None:intergenic | 10.0% |
| !! | AATGAAAAAGAATTAAAACA+AGG | + | chr1.3:70424283-70424302 | None:intergenic | 15.0% |
| !! | ATCTTAATCTTAATTAACAA+AGG | - | chr1.3:70426417-70426436 | MS.gene006381:CDS | 15.0% |
| !! | ACAAAAAGAAAAGAAAAAAG+TGG | + | chr1.3:70425429-70425448 | None:intergenic | 20.0% |
| !! | AGATGAAAAATATTAGTCAT+AGG | + | chr1.3:70424938-70424957 | None:intergenic | 20.0% |
| !! | AGATTAAGATACAACATAAA+TGG | + | chr1.3:70426407-70426426 | None:intergenic | 20.0% |
| !! | CAAAAACATGAAATTTACAT+AGG | + | chr1.3:70423925-70423944 | None:intergenic | 20.0% |
| !! | CTCTCATAAAAAAACAAAAA+TGG | + | chr1.3:70424120-70424139 | None:intergenic | 20.0% |
| !! | TAGACAAAATACAATATTCA+TGG | + | chr1.3:70424783-70424802 | None:intergenic | 20.0% |
| !! | TTTAATTGGTCAATTATTGT+AGG | - | chr1.3:70424211-70424230 | MS.gene006381:intron | 20.0% |
| !!! | AATTCTTTTTCATTTTGTGT+TGG | - | chr1.3:70424289-70424308 | MS.gene006381:intron | 20.0% |
| !!! | GGAGTAACAATATTTTTATT+GGG | + | chr1.3:70424012-70424031 | None:intergenic | 20.0% |
| !!! | TATGACTAATATTTTTCATC+TGG | - | chr1.3:70424937-70424956 | MS.gene006381:intron | 20.0% |
| ! | AAACTATCTCAAAATCATCA+CGG | + | chr1.3:70424355-70424374 | None:intergenic | 25.0% |
| ! | AGCATATCATAAAACAATAG+TGG | + | chr1.3:70425564-70425583 | None:intergenic | 25.0% |
| ! | AGCATTAGTTATAGTTTCTT+CGG | + | chr1.3:70425049-70425068 | None:intergenic | 25.0% |
| ! | GATTATTTCCATTCATTTGT+AGG | - | chr1.3:70426184-70426203 | MS.gene006381:CDS | 25.0% |
| ! | TAAATTTCCCAGTTGAAATA+AGG | + | chr1.3:70424633-70424652 | None:intergenic | 25.0% |
| ! | TAATCAGTGTTCTTAAATAG+CGG | - | chr1.3:70425486-70425505 | MS.gene006381:intron | 25.0% |
| ! | TATTAGTCATAGGAAACAAA+TGG | + | chr1.3:70424928-70424947 | None:intergenic | 25.0% |
| ! | TCAAAGAGAGATTTGAAAAA+AGG | - | chr1.3:70423508-70423527 | MS.gene006381:intron | 25.0% |
| ! | TTCAAAGATTGATGTTGAAT+GGG | - | chr1.3:70423561-70423580 | MS.gene006381:intron | 25.0% |
| ! | TTCTCACTAATAACTATATG+AGG | - | chr1.3:70426141-70426160 | MS.gene006381:CDS | 25.0% |
| ! | TTTCAAAGATTGATGTTGAA+TGG | - | chr1.3:70423560-70423579 | MS.gene006381:intron | 25.0% |
| !! | AGTATTGTTTTCAATATGCA+GGG | - | chr1.3:70424159-70424178 | MS.gene006381:intron | 25.0% |
| !! | ATTTAAGAACACTGATTAGA+AGG | + | chr1.3:70425484-70425503 | None:intergenic | 25.0% |
| !! | GTATCTTTTGATCTTTCTTT+AGG | - | chr1.3:70425840-70425859 | MS.gene006381:intron | 25.0% |
| !! | TAGTATTGTTTTCAATATGC+AGG | - | chr1.3:70424158-70424177 | MS.gene006381:intron | 25.0% |
| !! | TATGTTTTCTTGTTGCAAAT+AGG | - | chr1.3:70424733-70424752 | MS.gene006381:CDS | 25.0% |
| !! | TTTAAGAACACTGATTAGAA+GGG | + | chr1.3:70425483-70425502 | None:intergenic | 25.0% |
| !!! | GGGAGTAACAATATTTTTAT+TGG | + | chr1.3:70424013-70424032 | None:intergenic | 25.0% |
| !!! | GTAAATTTCATGTTTTTGTG+AGG | - | chr1.3:70423927-70423946 | MS.gene006381:CDS | 25.0% |
| !!! | GTATGTTTGTTATGTGATTT+TGG | - | chr1.3:70426293-70426312 | MS.gene006381:CDS | 25.0% |
| !!! | TTGTTTTTTGTCTGTTCTTA+GGG | - | chr1.3:70423952-70423971 | MS.gene006381:CDS | 25.0% |
| !!! | TTTGTTTTTTGTCTGTTCTT+AGG | - | chr1.3:70423951-70423970 | MS.gene006381:CDS | 25.0% |
| AAAAAGCAACTTGAACCATA+TGG | + | chr1.3:70425794-70425813 | None:intergenic | 30.0% | |
| AAAAGCAACTTGAACCATAT+GGG | + | chr1.3:70425793-70425812 | None:intergenic | 30.0% | |
| AATTCACTTAGACTCAATGA+TGG | - | chr1.3:70423664-70423683 | MS.gene006381:CDS | 30.0% | |
| ACAAAACCTCTAGATACATA+GGG | - | chr1.3:70424559-70424578 | MS.gene006381:CDS | 30.0% | |
| ACAAGGAAACAAAACATGTA+CGG | + | chr1.3:70424266-70424285 | None:intergenic | 30.0% | |
| ACATGAACAAGAGAAGAAAA+AGG | + | chr1.3:70423824-70423843 | None:intergenic | 30.0% | |
| AGCATTGTGAAATAGACTAT+AGG | - | chr1.3:70424523-70424542 | MS.gene006381:intron | 30.0% | |
| AGCCAATCATAGAGTTTAAT+TGG | - | chr1.3:70424197-70424216 | MS.gene006381:intron | 30.0% | |
| ATAAGCATCCTAAAGAAGAA+AGG | - | chr1.3:70424980-70424999 | MS.gene006381:intron | 30.0% | |
| ATCCAGCTCACAAAAAATAA+CGG | + | chr1.3:70425652-70425671 | None:intergenic | 30.0% | |
| ATTCACTTAGACTCAATGAT+GGG | - | chr1.3:70423665-70423684 | MS.gene006381:CDS | 30.0% | |
| ATTCATGGCATGATTATGTA+TGG | + | chr1.3:70424768-70424787 | None:intergenic | 30.0% | |
| CATGTTCTATTTACCAATGT+TGG | - | chr1.3:70424456-70424475 | MS.gene006381:intron | 30.0% | |
| CTATAACTAATGCTGGAAAT+TGG | - | chr1.3:70425055-70425074 | MS.gene006381:intron | 30.0% | |
| CTTAATCAACTACAGTTTCT+TGG | + | chr1.3:70425728-70425747 | None:intergenic | 30.0% | |
| GAAGAAACTATAACTAATGC+TGG | - | chr1.3:70425048-70425067 | MS.gene006381:intron | 30.0% | |
| GACCAATTAAACTCTATGAT+TGG | + | chr1.3:70424202-70424221 | None:intergenic | 30.0% | |
| GGAATATAATCTGGTAATCT+AGG | - | chr1.3:70423976-70423995 | MS.gene006381:CDS | 30.0% | |
| TAACTATATGAGGTTCACAT+AGG | - | chr1.3:70426151-70426170 | MS.gene006381:CDS | 30.0% | |
| TCAACACAATCAACTAGAAA+CGG | + | chr1.3:70424812-70424831 | None:intergenic | 30.0% | |
| TCATCAATAGCCAAAACAAT+CGG | + | chr1.3:70423712-70423731 | None:intergenic | 30.0% | |
| TGTTGAGGATTAATCAAGTT+GGG | + | chr1.3:70424033-70424052 | None:intergenic | 30.0% | |
| TTGTGTTGGAATGTTATGAT+TGG | - | chr1.3:70424303-70424322 | MS.gene006381:intron | 30.0% | |
| TTGTTGAGGATTAATCAAGT+TGG | + | chr1.3:70424034-70424053 | None:intergenic | 30.0% | |
| TTTCACAATGCTTTATAACG+AGG | + | chr1.3:70424515-70424534 | None:intergenic | 30.0% | |
| TTTCTTGGTCAACTATAGTT+TGG | + | chr1.3:70425713-70425732 | None:intergenic | 30.0% | |
| ! | AAAATGGGTATCAAACGTTT+TGG | + | chr1.3:70423365-70423384 | None:intergenic | 30.0% |
| ! | ATCTTTGAAAGCTTTATCCT+TGG | + | chr1.3:70423550-70423569 | None:intergenic | 30.0% |
| ! | TCATCTTCCTTATTTCAACT+GGG | - | chr1.3:70424623-70424642 | MS.gene006381:CDS | 30.0% |
| ! | TTCATCTTCCTTATTTCAAC+TGG | - | chr1.3:70424622-70424641 | MS.gene006381:CDS | 30.0% |
| !! | AGTTGCTCTTTTTGATTCTA+AGG | - | chr1.3:70423765-70423784 | MS.gene006381:intron | 30.0% |
| !! | GTTGCTCTTTTTGATTCTAA+GGG | - | chr1.3:70423766-70423785 | MS.gene006381:intron | 30.0% |
| !! | TATGTATCTAGAGGTTTTGT+GGG | + | chr1.3:70424559-70424578 | None:intergenic | 30.0% |
| !! | TTGATGATGATCAGAAACAT+CGG | - | chr1.3:70423725-70423744 | MS.gene006381:intron | 30.0% |
| !!! | CTCTAACTGATTTTTTTGGT+AGG | + | chr1.3:70425766-70425785 | None:intergenic | 30.0% |
| !!! | TACAGATCTCTTTTTTCAAC+AGG | + | chr1.3:70426030-70426049 | None:intergenic | 30.0% |
| !!! | TATGGTTCAAGTTGCTTTTT+TGG | - | chr1.3:70425794-70425813 | MS.gene006381:intron | 30.0% |
| !!! | TGTTTTTTGTCTGTTCTTAG+GGG | - | chr1.3:70423953-70423972 | MS.gene006381:CDS | 30.0% |
| AAAGCAACTTGAACCATATG+GGG | + | chr1.3:70425792-70425811 | None:intergenic | 35.0% | |
| AACCCATCAAGTATCATGAT+GGG | - | chr1.3:70425106-70425125 | MS.gene006381:intron | 35.0% | |
| AATGCTGGAAATTGGTTGAT+TGG | - | chr1.3:70425063-70425082 | MS.gene006381:intron | 35.0% | |
| AGTTCATCAATTACCCTGAA+AGG | + | chr1.3:70426117-70426136 | None:intergenic | 35.0% | |
| AGTTTAGTGCTTTCAAGCAA+TGG | - | chr1.3:70426544-70426563 | MS.gene006381:CDS | 35.0% | |
| ATCATCAGAACAACCAACAT+TGG | + | chr1.3:70424472-70424491 | None:intergenic | 35.0% | |
| CAAGATTTCGTCTTCATATC+AGG | - | chr1.3:70426263-70426282 | MS.gene006381:CDS | 35.0% | |
| CACAAAACCTCTAGATACAT+AGG | - | chr1.3:70424558-70424577 | MS.gene006381:CDS | 35.0% | |
| CCTAAACATTCTTCCTTTCA+GGG | - | chr1.3:70426101-70426120 | MS.gene006381:CDS | 35.0% | |
| CTAAAGAAGAAAGGATAGCT+CGG | - | chr1.3:70424989-70425008 | MS.gene006381:intron | 35.0% | |
| CTGCTATGCTATAGCATTAT+GGG | + | chr1.3:70425529-70425548 | None:intergenic | 35.0% | |
| GAGAATGAAACAACATGAGA+AGG | - | chr1.3:70425353-70425372 | MS.gene006381:intron | 35.0% | |
| GATATGAAGACGAAATCTTG+AGG | + | chr1.3:70426263-70426282 | None:intergenic | 35.0% | |
| GATCTTTCTTTAGGTACTTG+AGG | - | chr1.3:70425849-70425868 | MS.gene006381:intron | 35.0% | |
| GTTATAGTTTCTTCGGCATA+AGG | + | chr1.3:70425042-70425061 | None:intergenic | 35.0% | |
| GTTCTTAAATAGCGGCTAAT+CGG | - | chr1.3:70425494-70425513 | MS.gene006381:intron | 35.0% | |
| GTTGGAATGTTATGATTGGT+TGG | - | chr1.3:70424307-70424326 | MS.gene006381:intron | 35.0% | |
| GTTTCATTCTCCAATCAAGA+GGG | + | chr1.3:70425344-70425363 | None:intergenic | 35.0% | |
| TCCAGCTCACAAAAAATAAC+GGG | + | chr1.3:70425651-70425670 | None:intergenic | 35.0% | |
| TCTGCTATGCTATAGCATTA+TGG | + | chr1.3:70425530-70425549 | None:intergenic | 35.0% | |
| TGAAACTCTGAGTTTCTGAT+TGG | + | chr1.3:70423434-70423453 | None:intergenic | 35.0% | |
| TGTTTCATTCTCCAATCAAG+AGG | + | chr1.3:70425345-70425364 | None:intergenic | 35.0% | |
| TTTCTTTAGGTACTTGAGGA+TGG | - | chr1.3:70425853-70425872 | MS.gene006381:intron | 35.0% | |
| ! | AATTGAAATGAAGCGTTTGG+AGG | + | chr1.3:70423648-70423667 | None:intergenic | 35.0% |
| ! | ACTCTATGATTGGCTAAAGA+AGG | + | chr1.3:70424192-70424211 | None:intergenic | 35.0% |
| ! | ATGTTGGTTGTTCTGATGAT+TGG | - | chr1.3:70424472-70424491 | MS.gene006381:intron | 35.0% |
| ! | CTATGTATCTAGAGGTTTTG+TGG | + | chr1.3:70424560-70424579 | None:intergenic | 35.0% |
| ! | GGTATCTTACTCTTTGAGAA+TGG | + | chr1.3:70423803-70423822 | None:intergenic | 35.0% |
| ! | GTGAATTGAAATGAAGCGTT+TGG | + | chr1.3:70423651-70423670 | None:intergenic | 35.0% |
| ! | TATGTCTGTTCCGATTGTTT+TGG | - | chr1.3:70423699-70423718 | MS.gene006381:intron | 35.0% |
| !! | TTTGGTGTTTGTGTCTATGT+CGG | + | chr1.3:70426351-70426370 | None:intergenic | 35.0% |
| !!! | GAAAGAGGTTTTGGACAAAA+GGG | + | chr1.3:70423326-70423345 | None:intergenic | 35.0% |
| !!! | GATCTCTTTTTTCAACAGGA+TGG | + | chr1.3:70426026-70426045 | None:intergenic | 35.0% |
| !!! | GCAGCTCTAACTGATTTTTT+TGG | + | chr1.3:70425770-70425789 | None:intergenic | 35.0% |
| !!! | GTTATTTTTTGTGAGCTGGA+TGG | - | chr1.3:70425651-70425670 | MS.gene006381:intron | 35.0% |
| !!! | GTTCAAGTTGCTTTTTTGGA+TGG | - | chr1.3:70425798-70425817 | MS.gene006381:intron | 35.0% |
| !!! | GTTTTTTGTCTGTTCTTAGG+GGG | - | chr1.3:70423954-70423973 | MS.gene006381:CDS | 35.0% |
| !!! | TTTTTTGTCTGTTCTTAGGG+GGG | - | chr1.3:70423955-70423974 | MS.gene006381:CDS | 35.0% |
| AAAATTGGTAGAGCTTGTGG+TGG | - | chr1.3:70423480-70423499 | MS.gene006381:intron | 40.0% | |
| AACAAAGAAAGTCCTCCTGA+TGG | - | chr1.3:70426475-70426494 | MS.gene006381:CDS | 40.0% | |
| AAGCCCATCATGATACTTGA+TGG | + | chr1.3:70425112-70425131 | None:intergenic | 40.0% | |
| AGCAGCAACCTACAAATGAA+TGG | + | chr1.3:70426195-70426214 | None:intergenic | 40.0% | |
| AGCCCATCATGATACTTGAT+GGG | + | chr1.3:70425111-70425130 | None:intergenic | 40.0% | |
| ATCAGAGTCAACGTAGCAAT+TGG | - | chr1.3:70423394-70423413 | MS.gene006381:CDS | 40.0% | |
| CAAAGACCCTATGTATCTAG+AGG | + | chr1.3:70424568-70424587 | None:intergenic | 40.0% | |
| CAATACTTTCTTTCCGTGGT+CGG | + | chr1.3:70426058-70426077 | None:intergenic | 40.0% | |
| CAGAAACTCAGAGTTTCATC+CGG | - | chr1.3:70423436-70423455 | MS.gene006381:intron | 40.0% | |
| CCCTGAAAGGAAGAATGTTT+AGG | + | chr1.3:70426104-70426123 | None:intergenic | 40.0% | |
| CGAGCTATCCTTTCTTCTTT+AGG | + | chr1.3:70424991-70425010 | None:intergenic | 40.0% | |
| GAACCCATCAAGTATCATGA+TGG | - | chr1.3:70425105-70425124 | MS.gene006381:intron | 40.0% | |
| GAGGCAAACAATGACAATAG+AGG | + | chr1.3:70424379-70424398 | None:intergenic | 40.0% | |
| GATGATCAGAAACATCGGAT+CGG | - | chr1.3:70423730-70423749 | MS.gene006381:intron | 40.0% | |
| GCCTAAACATTCTTCCTTTC+AGG | - | chr1.3:70426100-70426119 | MS.gene006381:CDS | 40.0% | |
| GGTTGTTCTGATGATTGGTA+AGG | - | chr1.3:70424477-70424496 | MS.gene006381:intron | 40.0% | |
| TATCGGTCATTAGCAAAGCA+TGG | + | chr1.3:70425236-70425255 | None:intergenic | 40.0% | |
| TCTTAGGGGGGAATATAATC+TGG | - | chr1.3:70423967-70423986 | MS.gene006381:CDS | 40.0% | |
| TGCTCAATACTTTCTTTCCG+TGG | + | chr1.3:70426062-70426081 | None:intergenic | 40.0% | |
| TGGAAAATTGGTAGAGCTTG+TGG | - | chr1.3:70423477-70423496 | MS.gene006381:intron | 40.0% | |
| TGGCATTCTTTGATCCATCA+AGG | - | chr1.3:70426237-70426256 | MS.gene006381:CDS | 40.0% | |
| TTCAAGCAATGGCAAAGTTC+CGG | - | chr1.3:70426555-70426574 | MS.gene006381:CDS | 40.0% | |
| ! | ACTCTTTGAGAATGGCAACA+GGG | + | chr1.3:70423795-70423814 | None:intergenic | 40.0% |
| ! | TACTCTTTGAGAATGGCAAC+AGG | + | chr1.3:70423796-70423815 | None:intergenic | 40.0% |
| ! | TCTACCAATTTTCCACCATC+CGG | + | chr1.3:70423472-70423491 | None:intergenic | 40.0% |
| ! | TCTGAGTTTCTGATTGGTTC+TGG | + | chr1.3:70423428-70423447 | None:intergenic | 40.0% |
| ! | TTCATCCGGTTTGATTGAAC+CGG | - | chr1.3:70423450-70423469 | MS.gene006381:intron | 40.0% |
| !! | AATTGCTACGTTGACTCTGA+TGG | + | chr1.3:70423395-70423414 | None:intergenic | 40.0% |
| !! | ATTGCTACGTTGACTCTGAT+GGG | + | chr1.3:70423394-70423413 | None:intergenic | 40.0% |
| !! | CGGAAAGAAAGTATTGAGCA+TGG | - | chr1.3:70426062-70426081 | MS.gene006381:intron | 40.0% |
| !! | TGATGGGTTCTATAACCTCT+AGG | + | chr1.3:70425095-70425114 | None:intergenic | 40.0% |
| !! | TTTTGGAGAGAGAGTGAGAA+GGG | + | chr1.3:70423348-70423367 | None:intergenic | 40.0% |
| !!! | ACCCGTTATTTTTTGTGAGC+TGG | - | chr1.3:70425647-70425666 | MS.gene006381:intron | 40.0% |
| !!! | GGAAAGAGGTTTTGGACAAA+AGG | + | chr1.3:70423327-70423346 | None:intergenic | 40.0% |
| AAAGGCTAGGATCAATGCTG+GGG | - | chr1.3:70425960-70425979 | MS.gene006381:intron | 45.0% | |
| AACTCCGTGATGAGTTCACA+AGG | - | chr1.3:70425157-70425176 | MS.gene006381:intron | 45.0% | |
| AAGAAAGGATAGCTCGGACT+TGG | - | chr1.3:70424995-70425014 | MS.gene006381:intron | 45.0% | |
| AAGAGGGACATCATCAGCTT+TGG | + | chr1.3:70425328-70425347 | None:intergenic | 45.0% | |
| ACCATCCGGTTCAATCAAAC+CGG | + | chr1.3:70423458-70423477 | None:intergenic | 45.0% | |
| ACGAAATCTTGAGGCCTTGA+TGG | + | chr1.3:70426254-70426273 | None:intergenic | 45.0% | |
| AGAAAGGATAGCTCGGACTT+GGG | - | chr1.3:70424996-70425015 | MS.gene006381:intron | 45.0% | |
| AGAAGGGAAACGTGCATATG+TGG | + | chr1.3:70425467-70425486 | None:intergenic | 45.0% | |
| AGTGGATGAAGCAAGAGGAT+CGG | + | chr1.3:70425294-70425313 | None:intergenic | 45.0% | |
| ATCCTCTTGCTTCATCCACT+TGG | - | chr1.3:70425294-70425313 | MS.gene006381:intron | 45.0% | |
| ATGGACACAACTGTTGTCTC+TGG | + | chr1.3:70425889-70425908 | None:intergenic | 45.0% | |
| CAAAGGCTAGGATCAATGCT+GGG | - | chr1.3:70425959-70425978 | MS.gene006381:intron | 45.0% | |
| CGTCTTCATATCAGGCACAA+AGG | - | chr1.3:70426271-70426290 | MS.gene006381:CDS | 45.0% | |
| CTCTCATGAAACCACCAAGT+GGG | + | chr1.3:70423615-70423634 | None:intergenic | 45.0% | |
| GCTGCTTATGACAAGACTCA+GGG | - | chr1.3:70426209-70426228 | MS.gene006381:CDS | 45.0% | |
| GCTGGAAATTGGTTGATTGG+TGG | - | chr1.3:70425066-70425085 | MS.gene006381:intron | 45.0% | |
| GGGGCAAACTTCTACATTGT+CGG | - | chr1.3:70425979-70425998 | MS.gene006381:intron | 45.0% | |
| GTCAGCATCAGTGTCATGTT+TGG | + | chr1.3:70426369-70426388 | None:intergenic | 45.0% | |
| TAGTTTCTTCGGCATAAGGC+AGG | + | chr1.3:70425038-70425057 | None:intergenic | 45.0% | |
| TCCTCTTGCTTCATCCACTT+GGG | - | chr1.3:70425295-70425314 | MS.gene006381:intron | 45.0% | |
| TCTCATGAAACCACCAAGTG+GGG | + | chr1.3:70423614-70423633 | None:intergenic | 45.0% | |
| TCTCTCATGAAACCACCAAG+TGG | + | chr1.3:70423616-70423635 | None:intergenic | 45.0% | |
| TGACAAGACTCAGGGTAAGA+TGG | - | chr1.3:70426217-70426236 | MS.gene006381:CDS | 45.0% | |
| TTAGCAAAGCATGGCCATTG+TGG | + | chr1.3:70425227-70425246 | None:intergenic | 45.0% | |
| TTTGGACAAAAGGGTAGCCA+TGG | + | chr1.3:70423317-70423336 | None:intergenic | 45.0% | |
| ! | AACAAGTTGAGCCAAACCAC+CGG | - | chr1.3:70424049-70424068 | MS.gene006381:intron | 45.0% |
| ! | AACTCATCACGGAGTTCTGA+AGG | + | chr1.3:70425153-70425172 | None:intergenic | 45.0% |
| ! | CTGATGATGTCCCTCTTGAT+TGG | - | chr1.3:70425331-70425350 | MS.gene006381:intron | 45.0% |
| ! | GCGAAGCTTTATCATTGCCA+AGG | - | chr1.3:70423530-70423549 | MS.gene006381:intron | 45.0% |
| ! | GTGAGAAGGGAAAGAGGTTT+TGG | + | chr1.3:70423335-70423354 | None:intergenic | 45.0% |
| ! | TGCTGCTTATGACAAGACTC+AGG | - | chr1.3:70426208-70426227 | MS.gene006381:CDS | 45.0% |
| !! | AAAGTATTGAGCATGGCACC+TGG | - | chr1.3:70426069-70426088 | MS.gene006381:intron | 45.0% |
| !! | ACTCATCACGGAGTTCTGAA+GGG | + | chr1.3:70425152-70425171 | None:intergenic | 45.0% |
| !! | TGAACCGGATGGTGGAAAAT+TGG | - | chr1.3:70423465-70423484 | MS.gene006381:intron | 45.0% |
| !! | TGGTTTGGCTCAACTTGTTG+AGG | + | chr1.3:70424048-70424067 | None:intergenic | 45.0% |
| !!! | GTTTTGGAGAGAGAGTGAGA+AGG | + | chr1.3:70423349-70423368 | None:intergenic | 45.0% |
| !! | GAATAAAAATAAAATAAAAA+AGG | + | chr1.3:70424401-70424420 | None:intergenic | 5.0% |
| AAAGCATGGCCATTGTGGAC+AGG | + | chr1.3:70425222-70425241 | None:intergenic | 50.0% | |
| AGTTGGTCCAGCATAGTGCA+TGG | + | chr1.3:70425923-70425942 | None:intergenic | 50.0% | |
| CAAAGTTCCGGAACCTGTTC+CGG | - | chr1.3:70426567-70426586 | MS.gene006381:CDS | 50.0% | |
| CATATCAAGAAGCCGCTTGC+GGG | + | chr1.3:70425259-70425278 | None:intergenic | 50.0% | |
| CCAGGGCACATAAATCCATC+AGG | + | chr1.3:70426493-70426512 | None:intergenic | 50.0% | |
| CCATATCAAGAAGCCGCTTG+CGG | + | chr1.3:70425260-70425279 | None:intergenic | 50.0% | |
| CCTCTTGCTTCATCCACTTG+GGG | - | chr1.3:70425296-70425315 | MS.gene006381:intron | 50.0% | |
| CGCAAGCGGCTTCTTGATAT+GGG | - | chr1.3:70425258-70425277 | MS.gene006381:intron | 50.0% | |
| CTCTTGCTTCATCCACTTGG+GGG | - | chr1.3:70425297-70425316 | MS.gene006381:intron | 50.0% | |
| CTGGAACGCAAACACAGCAT+CGG | + | chr1.3:70425190-70425209 | None:intergenic | 50.0% | |
| GAAAGGATAGCTCGGACTTG+GGG | - | chr1.3:70424997-70425016 | MS.gene006381:intron | 50.0% | |
| GAGAGAGTGAGAAGGGAAAG+AGG | + | chr1.3:70423341-70423360 | None:intergenic | 50.0% | |
| GATCTGTATGATGCCGACCA+CGG | - | chr1.3:70426042-70426061 | MS.gene006381:intron | 50.0% | |
| GCAAAGGCTAGGATCAATGC+TGG | - | chr1.3:70425958-70425977 | MS.gene006381:intron | 50.0% | |
| GGGCACATAAATCCATCAGG+AGG | + | chr1.3:70426490-70426509 | None:intergenic | 50.0% | |
| GGGTTCATGTGCTGAGTGAA+GGG | - | chr1.3:70423581-70423600 | MS.gene006381:intron | 50.0% | |
| GGTTTGATTGAACCGGATGG+TGG | - | chr1.3:70423457-70423476 | MS.gene006381:intron | 50.0% | |
| GTTGGTCCAGCATAGTGCAT+GGG | + | chr1.3:70425922-70425941 | None:intergenic | 50.0% | |
| TAATGACCGATACCCGCAAG+CGG | - | chr1.3:70425244-70425263 | MS.gene006381:intron | 50.0% | |
| TCAGTTAGAGCTGCCCCATA+TGG | - | chr1.3:70425776-70425795 | MS.gene006381:intron | 50.0% | |
| TCATGTGCTGAGTGAAGGGT+GGG | - | chr1.3:70423585-70423604 | MS.gene006381:intron | 50.0% | |
| TCTGATGGGAGGGGCAAAAT+GGG | + | chr1.3:70423380-70423399 | None:intergenic | 50.0% | |
| TGCAGATGCGAACACTTGCT+AGG | - | chr1.3:70426452-70426471 | MS.gene006381:CDS | 50.0% | |
| TGCGCCTTGTGAACTCATCA+CGG | + | chr1.3:70425164-70425183 | None:intergenic | 50.0% | |
| TGGGTTCATGTGCTGAGTGA+AGG | - | chr1.3:70423580-70423599 | MS.gene006381:intron | 50.0% | |
| TTCATGTGCTGAGTGAAGGG+TGG | - | chr1.3:70423584-70423603 | MS.gene006381:intron | 50.0% | |
| ! | ACAAGTTGAGCCAAACCACC+GGG | - | chr1.3:70424050-70424069 | MS.gene006381:intron | 50.0% |
| ! | GATGGATTTATGTGCCCTGG+TGG | - | chr1.3:70426493-70426512 | MS.gene006381:CDS | 50.0% |
| ! | TCCGGTTTGATTGAACCGGA+TGG | - | chr1.3:70423454-70423473 | MS.gene006381:intron | 50.0% |
| !! | CCTGATGGATTTATGTGCCC+TGG | - | chr1.3:70426490-70426509 | MS.gene006381:CDS | 50.0% |
| !! | CTACGTTGACTCTGATGGGA+GGG | + | chr1.3:70423390-70423409 | None:intergenic | 50.0% |
| !! | CTCATCACGGAGTTCTGAAG+GGG | + | chr1.3:70425151-70425170 | None:intergenic | 50.0% |
| !! | GTTGATTGGTGGTGACCTAG+AGG | - | chr1.3:70425077-70425096 | MS.gene006381:intron | 50.0% |
| !! | TACGTTGACTCTGATGGGAG+GGG | + | chr1.3:70423389-70423408 | None:intergenic | 50.0% |
| AAACCACCGGGCAAGTGGTT+GGG | - | chr1.3:70424062-70424081 | MS.gene006381:intron | 55.0% | |
| AAACCTCCCAACCACTTGCC+CGG | + | chr1.3:70424071-70424090 | None:intergenic | 55.0% | |
| AAGAAGCCGCTTGCGGGTAT+CGG | + | chr1.3:70425253-70425272 | None:intergenic | 55.0% | |
| ACTTGGGGAACAACTGCTCC+CGG | - | chr1.3:70425012-70425031 | MS.gene006381:intron | 55.0% | |
| ATGTTTAGGCGCTCGAGTCC+AGG | + | chr1.3:70426090-70426109 | None:intergenic | 55.0% | |
| CAGCATAGTGCATGGGAGAC+GGG | + | chr1.3:70425915-70425934 | None:intergenic | 55.0% | |
| CCAGCATAGTGCATGGGAGA+CGG | + | chr1.3:70425916-70425935 | None:intergenic | 55.0% | |
| CCCCAAGTGGATGAAGCAAG+AGG | + | chr1.3:70425299-70425318 | None:intergenic | 55.0% | |
| CCGCAAGCGGCTTCTTGATA+TGG | - | chr1.3:70425257-70425276 | MS.gene006381:intron | 55.0% | |
| CTCCGGAATCCTGTCCACAA+TGG | - | chr1.3:70425210-70425229 | MS.gene006381:intron | 55.0% | |
| CTCTGATGGGAGGGGCAAAA+TGG | + | chr1.3:70423381-70423400 | None:intergenic | 55.0% | |
| CTGTGTTTGCGTTCCAGCTC+CGG | - | chr1.3:70425193-70425212 | MS.gene006381:intron | 55.0% | |
| GATTTATGTGCCCTGGTGGC+TGG | - | chr1.3:70426497-70426516 | MS.gene006381:CDS | 55.0% | |
| GCACTATGCTGGACCAACTG+AGG | - | chr1.3:70425924-70425943 | MS.gene006381:intron | 55.0% | |
| GCTTTGGTATAGCCCCCAAG+TGG | + | chr1.3:70425312-70425331 | None:intergenic | 55.0% | |
| GGCCATTGTGGACAGGATTC+CGG | + | chr1.3:70425215-70425234 | None:intergenic | 55.0% | |
| GTGCATGGGAGACGGGAATA+TGG | + | chr1.3:70425908-70425927 | None:intergenic | 55.0% | |
| TGAGGTGCAGTGGCATGCAA+AGG | - | chr1.3:70425942-70425961 | MS.gene006381:intron | 55.0% | |
| TGCAGTGGCATGCAAAGGCT+AGG | - | chr1.3:70425947-70425966 | MS.gene006381:intron | 55.0% | |
| TTCTTCGGCATAAGGCAGGC+CGG | + | chr1.3:70425034-70425053 | None:intergenic | 55.0% | |
| !! | GCTACGTTGACTCTGATGGG+AGG | + | chr1.3:70423391-70423410 | None:intergenic | 55.0% |
| ACTAGCACCTTCCAGCCACC+AGG | + | chr1.3:70426511-70426530 | None:intergenic | 60.0% | |
| ATTGTCGGTCGAGACCCTGC+AGG | - | chr1.3:70425994-70426013 | MS.gene006381:intron | 60.0% | |
| CAAACCACCGGGCAAGTGGT+TGG | - | chr1.3:70424061-70424080 | MS.gene006381:intron | 60.0% | |
| CAACCACTTGCCCGGTGGTT+TGG | + | chr1.3:70424063-70424082 | None:intergenic | 60.0% | |
| CCGTCTCCCATGCACTATGC+TGG | - | chr1.3:70425913-70425932 | MS.gene006381:intron | 60.0% | |
| CTAGCACCTTCCAGCCACCA+GGG | + | chr1.3:70426510-70426529 | None:intergenic | 60.0% | |
| CTGGACCAACTGAGGTGCAG+TGG | - | chr1.3:70425932-70425951 | MS.gene006381:intron | 60.0% | |
| GCATGCCACTGCACCTCAGT+TGG | + | chr1.3:70425940-70425959 | None:intergenic | 60.0% | |
| TATGTGCCCTGGTGGCTGGA+AGG | - | chr1.3:70426501-70426520 | MS.gene006381:CDS | 60.0% | |
| TCTTCGGCATAAGGCAGGCC+GGG | + | chr1.3:70425033-70425052 | None:intergenic | 60.0% | |
| TGTGGACAGGATTCCGGAGC+TGG | + | chr1.3:70425209-70425228 | None:intergenic | 60.0% | |
| ACAGGATGGCCCATGCCTGC+AGG | + | chr1.3:70426012-70426031 | None:intergenic | 65.0% | |
| CAGGATGGCCCATGCCTGCA+GGG | + | chr1.3:70426011-70426030 | None:intergenic | 65.0% | |
| GAGCCAAACCACCGGGCAAG+TGG | - | chr1.3:70424057-70424076 | MS.gene006381:intron | 65.0% | |
| GGTCGAGACCCTGCAGGCAT+GGG | - | chr1.3:70426000-70426019 | MS.gene006381:intron | 65.0% | |
| !! | GAAGGGTGGGCTACCCCACT+TGG | - | chr1.3:70423598-70423617 | MS.gene006381:intron | 65.0% |
| CCACCGGGCAAGTGGTTGGG+AGG | - | chr1.3:70424065-70424084 | MS.gene006381:intron | 70.0% | |
| CCTCCCAACCACTTGCCCGG+TGG | + | chr1.3:70424068-70424087 | None:intergenic | 70.0% | |
| CGGTCGAGACCCTGCAGGCA+TGG | - | chr1.3:70425999-70426018 | MS.gene006381:intron | 70.0% | |
| !! | GGGTGGGCTACCCCACTTGG+TGG | - | chr1.3:70423601-70423620 | MS.gene006381:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.3 | gene | 70423307 | 70426594 | 70423307 | ID=MS.gene006381 |
| chr1.3 | mRNA | 70423307 | 70426594 | 70423307 | ID=MS.gene006381.t1;Parent=MS.gene006381 |
| chr1.3 | exon | 70426089 | 70426594 | 70426089 | ID=MS.gene006381.t1.exon1;Parent=MS.gene006381.t1 |
| chr1.3 | CDS | 70426089 | 70426594 | 70426089 | ID=cds.MS.gene006381.t1;Parent=MS.gene006381.t1 |
| chr1.3 | exon | 70424527 | 70424932 | 70424527 | ID=MS.gene006381.t1.exon2;Parent=MS.gene006381.t1 |
| chr1.3 | CDS | 70424527 | 70424932 | 70424527 | ID=cds.MS.gene006381.t1;Parent=MS.gene006381.t1 |
| chr1.3 | exon | 70423779 | 70424039 | 70423779 | ID=MS.gene006381.t1.exon3;Parent=MS.gene006381.t1 |
| chr1.3 | CDS | 70423779 | 70424039 | 70423779 | ID=cds.MS.gene006381.t1;Parent=MS.gene006381.t1 |
| chr1.3 | exon | 70423609 | 70423695 | 70423609 | ID=MS.gene006381.t1.exon4;Parent=MS.gene006381.t1 |
| chr1.3 | CDS | 70423609 | 70423695 | 70423609 | ID=cds.MS.gene006381.t1;Parent=MS.gene006381.t1 |
| chr1.3 | exon | 70423307 | 70423444 | 70423307 | ID=MS.gene006381.t1.exon5;Parent=MS.gene006381.t1 |
| chr1.3 | CDS | 70423307 | 70423444 | 70423307 | ID=cds.MS.gene006381.t1;Parent=MS.gene006381.t1 |
| Gene Sequence |
| Protein sequence |
