Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene070980.t1 | XP_013469727.1 | 98.7 | 465 | 6 | 0 | 1 | 465 | 1 | 465 | 3.40E-273 | 950.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene070980.t1 | Q9LIK9 | 81.3 | 465 | 85 | 1 | 1 | 465 | 1 | 463 | 1.1e-227 | 790.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene070980.t1 | A0A072W0C8 | 98.7 | 465 | 6 | 0 | 1 | 465 | 1 | 465 | 2.4e-273 | 950.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene070980 | MS.gene37680 | PPI |
| MS.gene070980 | MS.gene006381 | PPI |
| MS.gene070980 | MS.gene018229 | PPI |
| MS.gene070980 | MS.gene34410 | PPI |
| MS.gene070980 | MS.gene37159 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene070980.t1 | MTR_1g102550 | 98.710 | 465 | 6 | 0 | 1 | 465 | 1 | 465 | 0.0 | 944 |
| MS.gene070980.t1 | MTR_6g016335 | 75.414 | 423 | 104 | 0 | 38 | 460 | 60 | 482 | 0.0 | 677 |
| MS.gene070980.t1 | MTR_6g016325 | 72.449 | 98 | 27 | 0 | 363 | 460 | 30 | 127 | 5.81e-46 | 156 |
| MS.gene070980.t1 | MTR_6g016320 | 95.082 | 61 | 3 | 0 | 304 | 364 | 12 | 72 | 2.69e-36 | 129 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene070980.t1 | AT3G22890 | 81.290 | 465 | 85 | 1 | 1 | 465 | 1 | 463 | 0.0 | 785 |
| MS.gene070980.t1 | AT4G14680 | 77.991 | 468 | 97 | 3 | 1 | 465 | 1 | 465 | 0.0 | 753 |
| MS.gene070980.t1 | AT5G43780 | 77.586 | 464 | 102 | 2 | 2 | 463 | 3 | 466 | 0.0 | 738 |
| MS.gene070980.t1 | AT4G14680 | 77.030 | 431 | 93 | 3 | 1 | 428 | 1 | 428 | 0.0 | 676 |
| MS.gene070980.t1 | AT1G19920 | 76.658 | 407 | 95 | 0 | 45 | 451 | 57 | 463 | 0.0 | 674 |
Find 154 sgRNAs with CRISPR-Local
Find 324 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCTTAAACATTCTTCCTTTC+AGG | 0.137830 | 1.4:-79297350 | MS.gene070980:CDS |
| CCGGGCTATCCTTTCTTCTT+TGG | 0.163995 | 1.4:+79298464 | None:intergenic |
| CCGCAAGCGGCTTCTTGATA+TGG | 0.186607 | 1.4:-79298196 | MS.gene070980:CDS |
| CGGGCTATCCTTTCTTCTTT+GGG | 0.223543 | 1.4:+79298465 | None:intergenic |
| CTCTGATGGGAGGGGCAAAA+TGG | 0.227116 | 1.4:+79300744 | None:intergenic |
| GTGAGAAGGGAAAGAGGTTT+TGG | 0.256344 | 1.4:+79300790 | None:intergenic |
| TCTGAGTTTCTGATTGGTTC+TGG | 0.283516 | 1.4:+79300697 | None:intergenic |
| CTATAACTAATGCTGGAAAT+TGG | 0.315885 | 1.4:-79298398 | MS.gene070980:CDS |
| TGACAAGACTCAGGGTAAAA+TGG | 0.330940 | 1.4:-79297232 | MS.gene070980:CDS |
| GTGCATGGGAGACGGGAATA+TGG | 0.346185 | 1.4:+79297545 | None:intergenic |
| GTGAATTGAAATGAAGCGTT+TGG | 0.352161 | 1.4:+79300474 | None:intergenic |
| GGCCATTGTGGACAGGGTTC+CGG | 0.360528 | 1.4:+79298241 | None:intergenic |
| ACAAAATCCTGAGGCCTTGA+TGG | 0.363166 | 1.4:+79297198 | None:intergenic |
| CACTAGACCGGAACAGGTTC+CGG | 0.365121 | 1.4:+79296885 | None:intergenic |
| GAGCAGTTGTTCCCCAAGTC+CGG | 0.369560 | 1.4:+79298445 | None:intergenic |
| TTTCAAAGATTGATGTTGAA+TGG | 0.369904 | 1.4:-79300562 | MS.gene070980:CDS |
| TTCAAGCAATGGCAAAGTTC+CGG | 0.370171 | 1.4:-79296904 | MS.gene070980:CDS |
| CAAAGTTCCGGAACCTGTTC+CGG | 0.376156 | 1.4:-79296892 | MS.gene070980:CDS |
| AAAATGGGTATCAAACGTTT+TGG | 0.377383 | 1.4:+79300760 | None:intergenic |
| GTTATAGTTTCTTCAGCATA+AGG | 0.393434 | 1.4:+79298414 | None:intergenic |
| CATATCAAGAAGCCGCTTGC+GGG | 0.394862 | 1.4:+79298197 | None:intergenic |
| TACTCTTTGAGAATGGCAAC+AGG | 0.396818 | 1.4:+79300329 | None:intergenic |
| CGCAAGCGGCTTCTTGATAT+GGG | 0.397191 | 1.4:-79298195 | MS.gene070980:CDS |
| TTCATCCGGTTTGATTGAAC+CGG | 0.402859 | 1.4:-79300672 | MS.gene070980:CDS |
| TGAACCGGATGGTGGAAAAT+TGG | 0.405429 | 1.4:-79300657 | MS.gene070980:CDS |
| ACGGGATGGCCCATGCCTGC+AGG | 0.410318 | 1.4:+79297441 | None:intergenic |
| GATTTATGTGCCCTGGTGGC+TGG | 0.411095 | 1.4:-79296962 | MS.gene070980:CDS |
| TGTGGACAGGGTTCCGGAGC+TGG | 0.411510 | 1.4:+79298247 | None:intergenic |
| CTTAAACATTCTTCCTTTCA+GGG | 0.415924 | 1.4:-79297349 | MS.gene070980:intron |
| CTGTGTTTGCGTTCCAGCTC+CGG | 0.416559 | 1.4:-79298260 | MS.gene070980:CDS |
| TTCAAAGATTGATGTTGAAT+GGG | 0.419355 | 1.4:-79300561 | MS.gene070980:CDS |
| ATCAGAGTCAACGTAGCAAT+TGG | 0.420035 | 1.4:-79300728 | MS.gene070980:CDS |
| AAGAAAGGATAGCCCGGACT+TGG | 0.424969 | 1.4:-79298458 | MS.gene070980:CDS |
| AATGCTGGAAATTGGTTGAT+TGG | 0.426694 | 1.4:-79298390 | MS.gene070980:CDS |
| GAGAGAGTGAGAAGGGAAAG+AGG | 0.428871 | 1.4:+79300784 | None:intergenic |
| AAGCCCATCATGATACTTGA+TGG | 0.430211 | 1.4:+79298344 | None:intergenic |
| CTTTGATCCATCAAGGCCTC+AGG | 0.430540 | 1.4:-79297205 | MS.gene070980:CDS |
| TCTGATGGGAGGGGCAAAAT+GGG | 0.437230 | 1.4:+79300745 | None:intergenic |
| TGAAACTCTGAGTTTCTGAT+TGG | 0.437359 | 1.4:+79300691 | None:intergenic |
| CGGTAGAGACCCTGCAGGCA+TGG | 0.441184 | 1.4:-79297451 | MS.gene070980:CDS |
| ATACAACACTAGACCGGAAC+AGG | 0.442459 | 1.4:+79296879 | None:intergenic |
| TATGTCTGTTCCGATTGTTT+TGG | 0.445173 | 1.4:-79300423 | MS.gene070980:CDS |
| ATCTTTGAAAGCTTTATCCT+TGG | 0.450558 | 1.4:+79300575 | None:intergenic |
| GATCTTTCTTTAGGTACTTG+AGG | 0.454226 | 1.4:-79297601 | MS.gene070980:intron |
| GGTATCTTACTCTTTGAGAA+TGG | 0.454494 | 1.4:+79300322 | None:intergenic |
| CACACCTTCAATGGCTTCCA+TGG | 0.454764 | 1.4:-79300825 | None:intergenic |
| ATGGATACAACTGTTGTCTC+TGG | 0.459319 | 1.4:+79297564 | None:intergenic |
| ATGTTTAAGCGCTCGAGTCC+AGG | 0.465204 | 1.4:+79297363 | None:intergenic |
| CCTGATGGATTTATGTGCCC+TGG | 0.467387 | 1.4:-79296969 | MS.gene070980:CDS |
| TTTCTTTAGGTACTTGAGGA+TGG | 0.469913 | 1.4:-79297597 | MS.gene070980:intron |
| GAAGAAACTATAACTAATGC+TGG | 0.471140 | 1.4:-79298405 | MS.gene070980:CDS |
| ACCATCCGGTTCAATCAAAC+CGG | 0.472422 | 1.4:+79300667 | None:intergenic |
| AAAGCATGGCCATTGTGGAC+AGG | 0.475521 | 1.4:+79298234 | None:intergenic |
| CAGAAACTCAGAGTTTCATC+CGG | 0.475836 | 1.4:-79300686 | MS.gene070980:CDS |
| CCGTCTCCCATGCACTATGC+TGG | 0.482401 | 1.4:-79297537 | MS.gene070980:CDS |
| AATTCACTTAGACTCAATGA+TGG | 0.483643 | 1.4:-79300458 | MS.gene070980:CDS |
| GCATGCCACTGCACCTCAGT+TGG | 0.486147 | 1.4:+79297513 | None:intergenic |
| AGTTTAGTGCTTTCAAGCAA+TGG | 0.487220 | 1.4:-79296915 | MS.gene070980:CDS |
| GGGTGGGCTACCCCACTTGG+TGG | 0.489758 | 1.4:-79300521 | MS.gene070980:CDS |
| CTGATGATGTACCACTTGAT+TGG | 0.492090 | 1.4:-79298122 | MS.gene070980:CDS |
| AATTGCTACGTTGACTCTGA+TGG | 0.492558 | 1.4:+79300730 | None:intergenic |
| TTCTTCAGCATAAGGCAGGC+CGG | 0.499948 | 1.4:+79298422 | None:intergenic |
| AAGTGGTACATCATCAGCTT+TGG | 0.500888 | 1.4:+79298128 | None:intergenic |
| GAAGGGTGGGCTACCCCACT+TGG | 0.502913 | 1.4:-79300524 | MS.gene070980:CDS |
| AGCAGTTGTTCCCCAAGTCC+GGG | 0.505472 | 1.4:+79298446 | None:intergenic |
| TAGTTTCTTCAGCATAAGGC+AGG | 0.507019 | 1.4:+79298418 | None:intergenic |
| GCAAAGGCTAGGATCAATGC+AGG | 0.509848 | 1.4:-79297492 | MS.gene070980:CDS |
| CAGCATAGTGCATGGGAGAC+GGG | 0.510140 | 1.4:+79297538 | None:intergenic |
| AACTCATCACGGAGTTCTGA+AGG | 0.511645 | 1.4:+79298303 | None:intergenic |
| TGCTCAATACTTTCTTTCCG+TGG | 0.512487 | 1.4:+79297391 | None:intergenic |
| TTCATGTGCTGAGTGAAGGG+TGG | 0.514044 | 1.4:-79300538 | MS.gene070980:CDS |
| GGTAGAGACCCTGCAGGCAT+GGG | 0.515724 | 1.4:-79297450 | MS.gene070980:CDS |
| TCATCAATAGCCAAAACAAT+CGG | 0.518346 | 1.4:+79300413 | None:intergenic |
| TCTTCAGCATAAGGCAGGCC+GGG | 0.518602 | 1.4:+79298423 | None:intergenic |
| TGGCATTCTTTGATCCATCA+AGG | 0.519192 | 1.4:-79297212 | MS.gene070980:CDS |
| CCAGGGCACATAAATCCATC+AGG | 0.520870 | 1.4:+79296969 | None:intergenic |
| TCATGTGCTGAGTGAAGGGT+GGG | 0.527216 | 1.4:-79300537 | MS.gene070980:CDS |
| CGGGATGGCCCATGCCTGCA+GGG | 0.527773 | 1.4:+79297442 | None:intergenic |
| AATTGAAATGAAGCGTTTGG+AGG | 0.528583 | 1.4:+79300477 | None:intergenic |
| GGGGCTAACTTCTACATTGT+CGG | 0.529113 | 1.4:-79297471 | MS.gene070980:CDS |
| ACTAGCACCTTCCAGCCACC+AGG | 0.530061 | 1.4:+79296951 | None:intergenic |
| AAGCATGGCCATTGTGGACA+GGG | 0.530459 | 1.4:+79298235 | None:intergenic |
| CTCCAAGTGGATGAAGCAAA+AGG | 0.531856 | 1.4:+79298157 | None:intergenic |
| GAACCCATCAAGTATCATGA+TGG | 0.533542 | 1.4:-79298348 | MS.gene070980:CDS |
| AGAAAGGATAGCCCGGACTT+GGG | 0.536377 | 1.4:-79298457 | MS.gene070980:CDS |
| CCAGCATAGTGCATGGGAGA+CGG | 0.537239 | 1.4:+79297537 | None:intergenic |
| GGGCTATCCTTTCTTCTTTG+GGG | 0.541088 | 1.4:+79298466 | None:intergenic |
| AATTCGTCAATTACCCTGAA+AGG | 0.541572 | 1.4:+79297336 | None:intergenic |
| ATAAGCACCCCAAAGAAGAA+AGG | 0.543122 | 1.4:-79298473 | MS.gene070980:CDS |
| TGATGGGTTCTATAACCTCT+AGG | 0.543315 | 1.4:+79298361 | None:intergenic |
| ACTTGGGGAACAACTGCTCC+CGG | 0.550066 | 1.4:-79298441 | MS.gene070980:CDS |
| AACAAAGAAAGTCCTCCTGA+TGG | 0.550290 | 1.4:-79296984 | MS.gene070980:CDS |
| AAAGTATTGAGCATGGCACC+TGG | 0.552120 | 1.4:-79297381 | MS.gene070980:CDS |
| TTTGGACAAAAGGGTAGCCA+TGG | 0.552527 | 1.4:+79300808 | None:intergenic |
| TGCAGATGCGCACACTTGCT+AGG | 0.553668 | 1.4:-79297007 | MS.gene070980:intron |
| AGTGGATGAAGCAAAAGGAC+TGG | 0.554010 | 1.4:+79298162 | None:intergenic |
| TATGTGCCCTGGTGGCTGGA+AGG | 0.556507 | 1.4:-79296958 | MS.gene070980:CDS |
| CTACGTTGACTCTGATGGGA+GGG | 0.561987 | 1.4:+79300735 | None:intergenic |
| TCCGGTTTGATTGAACCGGA+TGG | 0.563694 | 1.4:-79300668 | MS.gene070980:CDS |
| ATTGCTACGTTGACTCTGAT+GGG | 0.567247 | 1.4:+79300731 | None:intergenic |
| CTCTCATGAAACCACCAAGT+GGG | 0.567308 | 1.4:+79300510 | None:intergenic |
| GTGAAGCTTTATCATTGCCA+AGG | 0.567965 | 1.4:-79300592 | MS.gene070980:CDS |
| GAAAGGATAGCCCGGACTTG+GGG | 0.571803 | 1.4:-79298456 | MS.gene070980:CDS |
| TACGTTGACTCTGATGGGAG+GGG | 0.576534 | 1.4:+79300736 | None:intergenic |
| TGGGTTCATGTGCTGAGTGA+AGG | 0.577966 | 1.4:-79300542 | MS.gene070980:CDS |
| CCAAAGAAGAAAGGATAGCC+CGG | 0.578206 | 1.4:-79298464 | MS.gene070980:CDS |
| ATTAAAATACAACACTAGAC+CGG | 0.582109 | 1.4:+79296873 | None:intergenic |
| ATGATGTACCACTTGATTGG+AGG | 0.582625 | 1.4:-79298119 | MS.gene070980:CDS |
| AACCCATCAAGTATCATGAT+GGG | 0.586308 | 1.4:-79298347 | MS.gene070980:CDS |
| GTTGGTCCAGCATAGTGCAT+GGG | 0.590516 | 1.4:+79297531 | None:intergenic |
| ATTCACTTAGACTCAATGAT+GGG | 0.594320 | 1.4:-79300457 | MS.gene070980:CDS |
| GGTTTGATTGAACCGGATGG+TGG | 0.596506 | 1.4:-79300665 | MS.gene070980:CDS |
| AGCCCATCATGATACTTGAT+GGG | 0.597356 | 1.4:+79298345 | None:intergenic |
| TGCTGCATATGACAAGACTC+AGG | 0.597492 | 1.4:-79297241 | MS.gene070980:CDS |
| GGGTTCATGTGCTGAGTGAA+GGG | 0.599411 | 1.4:-79300541 | MS.gene070980:CDS |
| GCTGGAAATTGGTTGATTGG+TGG | 0.600582 | 1.4:-79298387 | MS.gene070980:CDS |
| AGTTGGTCCAGCATAGTGCA+TGG | 0.601513 | 1.4:+79297530 | None:intergenic |
| CCATATCAAGAAGCCGCTTG+CGG | 0.602478 | 1.4:+79298196 | None:intergenic |
| TGCAGTGGCATGCAAAGGCT+AGG | 0.605138 | 1.4:-79297503 | MS.gene070980:CDS |
| CAAAGGCTAGGATCAATGCA+GGG | 0.607482 | 1.4:-79297491 | MS.gene070980:CDS |
| TGAGGTGCAGTGGCATGCAA+AGG | 0.611774 | 1.4:-79297508 | MS.gene070980:CDS |
| TTAGCAAAGCATGGCCATTG+TGG | 0.614348 | 1.4:+79298229 | None:intergenic |
| TGTCTTCATATCAGGCACAA+AGG | 0.619092 | 1.4:-79297178 | MS.gene070980:intron |
| TATCAGTCATTAGCAAAGCA+TGG | 0.624374 | 1.4:+79298220 | None:intergenic |
| CTGGAACGCAAACACAGCAT+CGG | 0.624640 | 1.4:+79298266 | None:intergenic |
| GAGGATGAAACAGCATGAGA+AGG | 0.625780 | 1.4:-79298100 | MS.gene070980:intron |
| TGGAAAATTGGTAGAGCTTG+TGG | 0.628005 | 1.4:-79300645 | MS.gene070980:CDS |
| ACTCATCACGGAGTTCTGAA+GGG | 0.630273 | 1.4:+79298304 | None:intergenic |
| CTCCGGAACCCTGTCCACAA+TGG | 0.630690 | 1.4:-79298243 | MS.gene070980:CDS |
| AACTCCGTGATGAGTTCACA+AGG | 0.634078 | 1.4:-79298296 | MS.gene070980:CDS |
| CTCATCACGGAGTTCTGAAG+GGG | 0.634921 | 1.4:+79298305 | None:intergenic |
| TGCGCCTTGTGAACTCATCA+CGG | 0.635019 | 1.4:+79298292 | None:intergenic |
| TGTTTCATCCTCCAATCAAG+TGG | 0.641105 | 1.4:+79298111 | None:intergenic |
| TAATGACTGATACCCGCAAG+CGG | 0.641357 | 1.4:-79298209 | MS.gene070980:CDS |
| GATGGATTTATGTGCCCTGG+TGG | 0.643053 | 1.4:-79296966 | MS.gene070980:CDS |
| ATTGTCGGTAGAGACCCTGC+AGG | 0.643568 | 1.4:-79297456 | MS.gene070980:CDS |
| ACTCTTTGAGAATGGCAACA+GGG | 0.643983 | 1.4:+79300330 | None:intergenic |
| TCTCATGAAACCACCAAGTG+GGG | 0.649285 | 1.4:+79300511 | None:intergenic |
| CGGAAAGAAAGTATTGAGCA+TGG | 0.652115 | 1.4:-79297388 | MS.gene070980:CDS |
| CTGGACCAACTGAGGTGCAG+TGG | 0.655057 | 1.4:-79297518 | MS.gene070980:CDS |
| TCTCTCATGAAACCACCAAG+TGG | 0.655442 | 1.4:+79300509 | None:intergenic |
| TTGATGATGATCAGAAACAT+CGG | 0.659323 | 1.4:-79300397 | MS.gene070980:CDS |
| CTAGCACCTTCCAGCCACCA+GGG | 0.661333 | 1.4:+79296952 | None:intergenic |
| GATGATCAGAAACATCGGAT+CGG | 0.661345 | 1.4:-79300392 | MS.gene070980:CDS |
| GATCTATATGATGCTGACCA+CGG | 0.665987 | 1.4:-79297408 | MS.gene070980:CDS |
| GCTACGTTGACTCTGATGGG+AGG | 0.667478 | 1.4:+79300734 | None:intergenic |
| GCTGCATATGACAAGACTCA+GGG | 0.669592 | 1.4:-79297240 | MS.gene070980:CDS |
| GTTGATTGGTGGTGACCTAG+AGG | 0.677209 | 1.4:-79298376 | MS.gene070980:CDS |
| AAAGGCTAGGATCAATGCAG+GGG | 0.692913 | 1.4:-79297490 | MS.gene070980:CDS |
| AAAATTGGTAGAGCTTGTGG+TGG | 0.695154 | 1.4:-79300642 | MS.gene070980:CDS |
| GCACTATGCTGGACCAACTG+AGG | 0.705349 | 1.4:-79297526 | MS.gene070980:CDS |
| GGGCACATAAATCCATCAGG+AGG | 0.714670 | 1.4:+79296972 | None:intergenic |
| GCTTTGGTATAGCCTCCAAG+TGG | 0.715657 | 1.4:+79298144 | None:intergenic |
| GATATGAAGACAAAATCCTG+AGG | 0.718990 | 1.4:+79297189 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATATAATAATACTTATTAGA+AGG | + | chr1.4:79299746-79299765 | None:intergenic | 10.0% |
| !! | ATTATTCATATTACTTAAAT+AGG | - | chr1.4:79298565-79298584 | MS.gene070980:intron | 10.0% |
| !! | TAAATGTATTATTATAAACT+AGG | + | chr1.4:79298440-79298459 | None:intergenic | 10.0% |
| !! | TAATAAGTATTATTATATAG+CGG | - | chr1.4:79299748-79299767 | MS.gene070980:intron | 10.0% |
| !! | TATAATAATACTTATTAGAA+GGG | + | chr1.4:79299745-79299764 | None:intergenic | 10.0% |
| !!! | AATTTATTTTTGTATTTGTT+TGG | + | chr1.4:79298843-79298862 | None:intergenic | 10.0% |
| !! | AATGAAAAAGAATTAAAACA+AGG | + | chr1.4:79297850-79297869 | None:intergenic | 15.0% |
| !! | TCTCATAAAAAAAACAAAAA+TGG | + | chr1.4:79297700-79297719 | None:intergenic | 15.0% |
| !! | TTTAGTAGGTAAATAAATTA+TGG | + | chr1.4:79300008-79300027 | None:intergenic | 15.0% |
| !! | CAAAAACATGAAATTTACAT+AGG | + | chr1.4:79297505-79297524 | None:intergenic | 20.0% |
| !!! | AATTCTTTTTCATTTTGTGT+TGG | - | chr1.4:79297856-79297875 | MS.gene070980:intron | 20.0% |
| !!! | ACTTTTTTCTTAAATAGAGA+AGG | + | chr1.4:79298673-79298692 | None:intergenic | 20.0% |
| !!! | ATATAGATCTCTTTTTTCAA+CGG | + | chr1.4:79300283-79300302 | None:intergenic | 20.0% |
| !!! | ATATCTTTTGATCTTTCTTT+AGG | - | chr1.4:79300092-79300111 | MS.gene070980:intron | 20.0% |
| !!! | ATATGCTATTTAGTACAAAA+TGG | - | chr1.4:79299839-79299858 | MS.gene070980:intron | 20.0% |
| !!! | GGAGTAACAATATTTTTATT+GGG | + | chr1.4:79297592-79297611 | None:intergenic | 20.0% |
| !!! | TAAGATATAAGCTTTTAAAC+AGG | + | chr1.4:79298252-79298271 | None:intergenic | 20.0% |
| !!! | TATTTCACAATGCTTTATTA+GGG | + | chr1.4:79298768-79298787 | None:intergenic | 20.0% |
| !!! | TTAAGCTTATTTAGCTTAAA+AGG | + | chr1.4:79298637-79298656 | None:intergenic | 20.0% |
| ! | AAACTATCTCAAAATCATCA+CGG | + | chr1.4:79297922-79297941 | None:intergenic | 25.0% |
| ! | AACACAAAAAGAAAAGAAAG+TGG | + | chr1.4:79299680-79299699 | None:intergenic | 25.0% |
| ! | AAGCAACTTAAACCATATTA+TGG | + | chr1.4:79300050-79300069 | None:intergenic | 25.0% |
| ! | ACAAAATCTCTAGATACATA+GGG | - | chr1.4:79298810-79298829 | MS.gene070980:intron | 25.0% |
| ! | AGAGGAAAAATATTAGTCAT+AGG | + | chr1.4:79299187-79299206 | None:intergenic | 25.0% |
| ! | AGCAACTTAAACCATATTAT+GGG | + | chr1.4:79300049-79300068 | None:intergenic | 25.0% |
| ! | ATAAGCTTAAAAAAAAGCCT+AGG | - | chr1.4:79298647-79298666 | MS.gene070980:intron | 25.0% |
| ! | CAATGTGATCTAAGTTTAAA+TGG | - | chr1.4:79298290-79298309 | MS.gene070980:CDS | 25.0% |
| ! | CTCTATTTAAGAAAAAAGTC+TGG | - | chr1.4:79298674-79298693 | MS.gene070980:intron | 25.0% |
| ! | GATTATTTCCATTCATTTGT+AGG | - | chr1.4:79300437-79300456 | MS.gene070980:CDS | 25.0% |
| ! | TATTAGTCATAGGAAACAAA+TGG | + | chr1.4:79299177-79299196 | None:intergenic | 25.0% |
| ! | TCAAAGAGAGATTTGAAAAA+AGG | - | chr1.4:79297088-79297107 | MS.gene070980:intron | 25.0% |
| ! | TCGACAAAATACAATATTCA+GGG | + | chr1.4:79299012-79299031 | None:intergenic | 25.0% |
| ! | TCTCACTAATAAATACATTG+AGG | - | chr1.4:79300394-79300413 | MS.gene070980:CDS | 25.0% |
| ! | TGTTGTCTCTTAATTAACAA+AGG | - | chr1.4:79300660-79300679 | MS.gene070980:CDS | 25.0% |
| ! | TTCAAAGATTGATGTTGAAT+GGG | - | chr1.4:79297141-79297160 | MS.gene070980:intron | 25.0% |
| ! | TTTCAAAGATTGATGTTGAA+TGG | - | chr1.4:79297140-79297159 | MS.gene070980:intron | 25.0% |
| !! | AGTATTGTTTTCAATATGCA+GGG | - | chr1.4:79297740-79297759 | MS.gene070980:intron | 25.0% |
| !! | CTATTTCACAATGCTTTATT+AGG | + | chr1.4:79298769-79298788 | None:intergenic | 25.0% |
| !! | TAGTATTGTTTTCAATATGC+AGG | - | chr1.4:79297739-79297758 | MS.gene070980:intron | 25.0% |
| !! | TATGACTAATATTTTTCCTC+TGG | - | chr1.4:79299186-79299205 | MS.gene070980:intron | 25.0% |
| !! | TATGTATCTAGAGATTTTGT+GGG | + | chr1.4:79298810-79298829 | None:intergenic | 25.0% |
| !!! | CTCTAACTGATTTTTTTAGT+AGG | + | chr1.4:79300022-79300041 | None:intergenic | 25.0% |
| !!! | GCTTAGGCTTTAAAAAAATA+TGG | + | chr1.4:79298154-79298173 | None:intergenic | 25.0% |
| !!! | GGGAGTAACAATATTTTTAT+TGG | + | chr1.4:79297593-79297612 | None:intergenic | 25.0% |
| !!! | GTAAATTTCATGTTTTTGTG+AGG | - | chr1.4:79297507-79297526 | MS.gene070980:CDS | 25.0% |
| !!! | TATAGATCTCTTTTTTCAAC+GGG | + | chr1.4:79300282-79300301 | None:intergenic | 25.0% |
| !!! | TATGGTTTAAGTTGCTTTTT+TGG | - | chr1.4:79300053-79300072 | MS.gene070980:intron | 25.0% |
| !!! | TTGTTTTTTGTCTGTTCTTA+GGG | - | chr1.4:79297532-79297551 | MS.gene070980:CDS | 25.0% |
| !!! | TTTGTTTTTTGTCTGTTCTT+AGG | - | chr1.4:79297531-79297550 | MS.gene070980:CDS | 25.0% |
| AAATACATTGAGGTTCACTT+AGG | - | chr1.4:79300404-79300423 | MS.gene070980:CDS | 30.0% | |
| AATTCACTTAGACTCAATGA+TGG | - | chr1.4:79297244-79297263 | MS.gene070980:CDS | 30.0% | |
| ACATGAACAAGAGAAGAAAA+AGG | + | chr1.4:79297404-79297423 | None:intergenic | 30.0% | |
| AGCATTGTGAAATAGACTAT+AGG | - | chr1.4:79298774-79298793 | MS.gene070980:intron | 30.0% | |
| AGCCAATCATAGAGTTTAAT+TGG | - | chr1.4:79297778-79297797 | MS.gene070980:intron | 30.0% | |
| ATTATTATATAGCGGCGAAT+CGG | - | chr1.4:79299756-79299775 | MS.gene070980:intron | 30.0% | |
| ATTCACTTAGACTCAATGAT+GGG | - | chr1.4:79297245-79297264 | MS.gene070980:CDS | 30.0% | |
| CACAAAATCTCTAGATACAT+AGG | - | chr1.4:79298809-79298828 | MS.gene070980:intron | 30.0% | |
| CATGTTCTATTTACCAATGT+TGG | - | chr1.4:79298023-79298042 | MS.gene070980:intron | 30.0% | |
| CTATAACTAATGCTGGAAAT+TGG | - | chr1.4:79299304-79299323 | MS.gene070980:intron | 30.0% | |
| CTTAAACATTCTTCCTTTCA+GGG | - | chr1.4:79300353-79300372 | MS.gene070980:CDS | 30.0% | |
| GAAGAAACTATAACTAATGC+TGG | - | chr1.4:79299297-79299316 | MS.gene070980:intron | 30.0% | |
| GACCAATTAAACTCTATGAT+TGG | + | chr1.4:79297783-79297802 | None:intergenic | 30.0% | |
| GCAACTTAAACCATATTATG+GGG | + | chr1.4:79300048-79300067 | None:intergenic | 30.0% | |
| GGAATATAATCTGGTAATCT+AGG | - | chr1.4:79297556-79297575 | MS.gene070980:CDS | 30.0% | |
| GTCGACAAAATACAATATTC+AGG | + | chr1.4:79299013-79299032 | None:intergenic | 30.0% | |
| GTTATAGTTTCTTCAGCATA+AGG | + | chr1.4:79299291-79299310 | None:intergenic | 30.0% | |
| TCATCAATAGCCAAAACAAT+CGG | + | chr1.4:79297292-79297311 | None:intergenic | 30.0% | |
| TCTTGAACTTATCTTGAACA+AGG | + | chr1.4:79298884-79298903 | None:intergenic | 30.0% | |
| TGTGGAAAAGCAAGAAATTA+AGG | + | chr1.4:79299711-79299730 | None:intergenic | 30.0% | |
| TGTTGAGGATTAATCAAGTT+GGG | + | chr1.4:79297613-79297632 | None:intergenic | 30.0% | |
| TTGAAATTCTTGTTGCGAAT+AGG | - | chr1.4:79298962-79298981 | MS.gene070980:intron | 30.0% | |
| TTGTGTTGGAATGTTATGAT+TGG | - | chr1.4:79297870-79297889 | MS.gene070980:intron | 30.0% | |
| TTGTTGAGGATTAATCAAGT+TGG | + | chr1.4:79297614-79297633 | None:intergenic | 30.0% | |
| ! | AAAATGGGTATCAAACGTTT+TGG | + | chr1.4:79296945-79296964 | None:intergenic | 30.0% |
| ! | ATAATCAACACGAGGTTTTA+GGG | - | chr1.4:79298354-79298373 | MS.gene070980:CDS | 30.0% |
| ! | ATCTTTGAAAGCTTTATCCT+TGG | + | chr1.4:79297130-79297149 | None:intergenic | 30.0% |
| ! | CTATGTATCTAGAGATTTTG+TGG | + | chr1.4:79298811-79298830 | None:intergenic | 30.0% |
| ! | GGTATGTTATTCTGTGATTT+TGG | - | chr1.4:79300545-79300564 | MS.gene070980:CDS | 30.0% |
| !! | AGGCTTTAAAAAAATATGGC+AGG | + | chr1.4:79298150-79298169 | None:intergenic | 30.0% |
| !! | AGTTGCTCTTTTTGATTCTA+AGG | - | chr1.4:79297345-79297364 | MS.gene070980:intron | 30.0% |
| !! | GTTGCTCTTTTTGATTCTAA+GGG | - | chr1.4:79297346-79297365 | MS.gene070980:intron | 30.0% |
| !! | TTGATGATGATCAGAAACAT+CGG | - | chr1.4:79297305-79297324 | MS.gene070980:intron | 30.0% |
| !!! | ATTTTTTTAAAGCCTAAGCC+TGG | - | chr1.4:79298155-79298174 | MS.gene070980:CDS | 30.0% |
| !!! | GTTTAAGTTGCTTTTTTGGA+TGG | - | chr1.4:79300057-79300076 | MS.gene070980:intron | 30.0% |
| !!! | TGTTTTTTGTCTGTTCTTAG+GGG | - | chr1.4:79297533-79297552 | MS.gene070980:CDS | 30.0% |
| !!! | TTCTGTGATTTTGGAACATA+CGG | - | chr1.4:79300554-79300573 | MS.gene070980:CDS | 30.0% |
| AAAAGCCTCTTAAGCCTATT+AGG | + | chr1.4:79298595-79298614 | None:intergenic | 35.0% | |
| AACCCATCAAGTATCATGAT+GGG | - | chr1.4:79299355-79299374 | MS.gene070980:intron | 35.0% | |
| AATACCTCGTCATAAAGCAT+AGG | - | chr1.4:79298076-79298095 | MS.gene070980:intron | 35.0% | |
| AATGCTGGAAATTGGTTGAT+TGG | - | chr1.4:79299312-79299331 | MS.gene070980:intron | 35.0% | |
| AATTCGTCAATTACCCTGAA+AGG | + | chr1.4:79300369-79300388 | None:intergenic | 35.0% | |
| ACAAGGACACAAAACATGTA+CGG | + | chr1.4:79297833-79297852 | None:intergenic | 35.0% | |
| AGAAGCAATGTTGTCAATCA+CGG | + | chr1.4:79299941-79299960 | None:intergenic | 35.0% | |
| AGTTTAGTGCTTTCAAGCAA+TGG | - | chr1.4:79300787-79300806 | MS.gene070980:CDS | 35.0% | |
| ATACCTCGTCATAAAGCATA+GGG | - | chr1.4:79298077-79298096 | MS.gene070980:intron | 35.0% | |
| ATCATCAGAACAACCAACAT+TGG | + | chr1.4:79298039-79298058 | None:intergenic | 35.0% | |
| CACGGCTCACAAAAATTTAA+CGG | + | chr1.4:79299923-79299942 | None:intergenic | 35.0% | |
| CTTAAATAGGTCAGCCTAAT+AGG | - | chr1.4:79298578-79298597 | MS.gene070980:intron | 35.0% | |
| GATATGAAGACAAAATCCTG+AGG | + | chr1.4:79300516-79300535 | None:intergenic | 35.0% | |
| GATCTTTCTTTAGGTACTTG+AGG | - | chr1.4:79300101-79300120 | MS.gene070980:intron | 35.0% | |
| GCTTAAACATTCTTCCTTTC+AGG | - | chr1.4:79300352-79300371 | MS.gene070980:CDS | 35.0% | |
| GTTGGAATGTTATGATTGGT+TGG | - | chr1.4:79297874-79297893 | MS.gene070980:intron | 35.0% | |
| TATCAGTCATTAGCAAAGCA+TGG | + | chr1.4:79299485-79299504 | None:intergenic | 35.0% | |
| TGAAACTCTGAGTTTCTGAT+TGG | + | chr1.4:79297014-79297033 | None:intergenic | 35.0% | |
| TTCTTAAATAGAGAAGGCCT+AGG | + | chr1.4:79298667-79298686 | None:intergenic | 35.0% | |
| TTTAAGAAAAAAGTCTGGCC+TGG | - | chr1.4:79298679-79298698 | MS.gene070980:intron | 35.0% | |
| TTTCTTTAGGTACTTGAGGA+TGG | - | chr1.4:79300105-79300124 | MS.gene070980:intron | 35.0% | |
| ! | AATTGAAATGAAGCGTTTGG+AGG | + | chr1.4:79297228-79297247 | None:intergenic | 35.0% |
| ! | ACTCTATGATTGGCTAAAGA+AGG | + | chr1.4:79297773-79297792 | None:intergenic | 35.0% |
| ! | ATGTTGGTTGTTCTGATGAT+TGG | - | chr1.4:79298039-79298058 | MS.gene070980:intron | 35.0% |
| ! | CACAATGCTTTATTAGGGAT+GGG | + | chr1.4:79298763-79298782 | None:intergenic | 35.0% |
| ! | CAGGATTTTGTCTTCATATC+AGG | - | chr1.4:79300516-79300535 | MS.gene070980:CDS | 35.0% |
| ! | GATAATCAACACGAGGTTTT+AGG | - | chr1.4:79298353-79298372 | MS.gene070980:CDS | 35.0% |
| ! | GGTATCTTACTCTTTGAGAA+TGG | + | chr1.4:79297383-79297402 | None:intergenic | 35.0% |
| ! | GTGAATTGAAATGAAGCGTT+TGG | + | chr1.4:79297231-79297250 | None:intergenic | 35.0% |
| ! | TATGTCTGTTCCGATTGTTT+TGG | - | chr1.4:79297279-79297298 | MS.gene070980:intron | 35.0% |
| ! | TCACAATGCTTTATTAGGGA+TGG | + | chr1.4:79298764-79298783 | None:intergenic | 35.0% |
| !! | CTCTTTTGATAATCAACACG+AGG | - | chr1.4:79298346-79298365 | MS.gene070980:CDS | 35.0% |
| !!! | GAAAGAGGTTTTGGACAAAA+GGG | + | chr1.4:79296906-79296925 | None:intergenic | 35.0% |
| !!! | GTTTTTTGTCTGTTCTTAGG+GGG | - | chr1.4:79297534-79297553 | MS.gene070980:CDS | 35.0% |
| !!! | TTTTTTGTCTGTTCTTAGGG+GGG | - | chr1.4:79297535-79297554 | MS.gene070980:CDS | 35.0% |
| AAAATTGGTAGAGCTTGTGG+TGG | - | chr1.4:79297060-79297079 | MS.gene070980:intron | 40.0% | |
| AACAAAGAAAGTCCTCCTGA+TGG | - | chr1.4:79300718-79300737 | MS.gene070980:CDS | 40.0% | |
| AAGCCCATCATGATACTTGA+TGG | + | chr1.4:79299361-79299380 | None:intergenic | 40.0% | |
| AAGTGGTACATCATCAGCTT+TGG | + | chr1.4:79299577-79299596 | None:intergenic | 40.0% | |
| AGAGTCTCATTGTTGAAGCT+AGG | - | chr1.4:79299654-79299673 | MS.gene070980:intron | 40.0% | |
| AGCCCATCATGATACTTGAT+GGG | + | chr1.4:79299360-79299379 | None:intergenic | 40.0% | |
| ATAAGCACCCCAAAGAAGAA+AGG | - | chr1.4:79299229-79299248 | MS.gene070980:intron | 40.0% | |
| ATCAGAGTCAACGTAGCAAT+TGG | - | chr1.4:79296974-79296993 | MS.gene070980:CDS | 40.0% | |
| ATGATGTACCACTTGATTGG+AGG | - | chr1.4:79299583-79299602 | MS.gene070980:intron | 40.0% | |
| ATGGATACAACTGTTGTCTC+TGG | + | chr1.4:79300141-79300160 | None:intergenic | 40.0% | |
| CAGAAACTCAGAGTTTCATC+CGG | - | chr1.4:79297016-79297035 | MS.gene070980:intron | 40.0% | |
| CTAAAAAGTAGGCCTATGAC+AGG | + | chr1.4:79298188-79298207 | None:intergenic | 40.0% | |
| GAACCCATCAAGTATCATGA+TGG | - | chr1.4:79299354-79299373 | MS.gene070980:intron | 40.0% | |
| GAGGCAAACAATGACAATAG+AGG | + | chr1.4:79297946-79297965 | None:intergenic | 40.0% | |
| GATCTATATGATGCTGACCA+CGG | - | chr1.4:79300294-79300313 | MS.gene070980:intron | 40.0% | |
| GATGATCAGAAACATCGGAT+CGG | - | chr1.4:79297310-79297329 | MS.gene070980:intron | 40.0% | |
| GGTTGTTCTGATGATTGGTA+AGG | - | chr1.4:79298044-79298063 | MS.gene070980:intron | 40.0% | |
| GTTAGAGCTTCCCCATAATA+TGG | - | chr1.4:79300035-79300054 | MS.gene070980:intron | 40.0% | |
| GTTCTTAGTCAACCACAGTT+GGG | + | chr1.4:79299986-79300005 | None:intergenic | 40.0% | |
| TAGTTTCTTCAGCATAAGGC+AGG | + | chr1.4:79299287-79299306 | None:intergenic | 40.0% | |
| TCGTCATAAAGCATAGGGAT+GGG | - | chr1.4:79298082-79298101 | MS.gene070980:intron | 40.0% | |
| TCTTAGGGGGGAATATAATC+TGG | - | chr1.4:79297547-79297566 | MS.gene070980:CDS | 40.0% | |
| TGACAAGACTCAGGGTAAAA+TGG | - | chr1.4:79300470-79300489 | MS.gene070980:CDS | 40.0% | |
| TGCAGCAACCTACAAATGAA+TGG | + | chr1.4:79300448-79300467 | None:intergenic | 40.0% | |
| TGCTCAATACTTTCTTTCCG+TGG | + | chr1.4:79300314-79300333 | None:intergenic | 40.0% | |
| TGGAAAATTGGTAGAGCTTG+TGG | - | chr1.4:79297057-79297076 | MS.gene070980:intron | 40.0% | |
| TGGCATTCTTTGATCCATCA+AGG | - | chr1.4:79300490-79300509 | MS.gene070980:CDS | 40.0% | |
| TGTCTTCATATCAGGCACAA+AGG | - | chr1.4:79300524-79300543 | MS.gene070980:CDS | 40.0% | |
| TGTTTCATCCTCCAATCAAG+TGG | + | chr1.4:79299594-79299613 | None:intergenic | 40.0% | |
| TTCAAGCAATGGCAAAGTTC+CGG | - | chr1.4:79300798-79300817 | MS.gene070980:CDS | 40.0% | |
| TTCGATACTGAAATAGCCAG+AGG | + | chr1.4:79299205-79299224 | None:intergenic | 40.0% | |
| ! | AAGCTTTTAAACAGGCTAGC+AGG | + | chr1.4:79298244-79298263 | None:intergenic | 40.0% |
| ! | ACTCTTTGAGAATGGCAACA+GGG | + | chr1.4:79297375-79297394 | None:intergenic | 40.0% |
| ! | CTGATGATGTACCACTTGAT+TGG | - | chr1.4:79299580-79299599 | MS.gene070980:intron | 40.0% |
| ! | GCTTTATTAGGGATGGGAAT+AGG | + | chr1.4:79298757-79298776 | None:intergenic | 40.0% |
| ! | GTGAAGCTTTATCATTGCCA+AGG | - | chr1.4:79297110-79297129 | MS.gene070980:intron | 40.0% |
| ! | GTTTTACCATATCCCAACTG+TGG | - | chr1.4:79299971-79299990 | MS.gene070980:intron | 40.0% |
| ! | TACTCTTTGAGAATGGCAAC+AGG | + | chr1.4:79297376-79297395 | None:intergenic | 40.0% |
| ! | TCTACCAATTTTCCACCATC+CGG | + | chr1.4:79297052-79297071 | None:intergenic | 40.0% |
| ! | TCTGAGTTTCTGATTGGTTC+TGG | + | chr1.4:79297008-79297027 | None:intergenic | 40.0% |
| ! | TTCATCCGGTTTGATTGAAC+CGG | - | chr1.4:79297030-79297049 | MS.gene070980:intron | 40.0% |
| !! | AATTGCTACGTTGACTCTGA+TGG | + | chr1.4:79296975-79296994 | None:intergenic | 40.0% |
| !! | ATTGCTACGTTGACTCTGAT+GGG | + | chr1.4:79296974-79296993 | None:intergenic | 40.0% |
| !! | CGGAAAGAAAGTATTGAGCA+TGG | - | chr1.4:79300314-79300333 | MS.gene070980:intron | 40.0% |
| !! | TGATGGGTTCTATAACCTCT+AGG | + | chr1.4:79299344-79299363 | None:intergenic | 40.0% |
| !! | TTTTGGAGAGAGAGTGAGAA+GGG | + | chr1.4:79296928-79296947 | None:intergenic | 40.0% |
| !!! | CTGTCATAGGCCTACTTTTT+AGG | - | chr1.4:79298186-79298205 | MS.gene070980:CDS | 40.0% |
| !!! | GATCTCTTTTTTCAACGGGA+TGG | + | chr1.4:79300278-79300297 | None:intergenic | 40.0% |
| !!! | GGAAAGAGGTTTTGGACAAA+AGG | + | chr1.4:79296907-79296926 | None:intergenic | 40.0% |
| AAAGGCTAGGATCAATGCAG+GGG | - | chr1.4:79300212-79300231 | MS.gene070980:intron | 45.0% | |
| AAATATGGCAGGCCAGACTT+AGG | + | chr1.4:79298139-79298158 | None:intergenic | 45.0% | |
| AACTCCGTGATGAGTTCACA+AGG | - | chr1.4:79299406-79299425 | MS.gene070980:intron | 45.0% | |
| ACAAAATCCTGAGGCCTTGA+TGG | + | chr1.4:79300507-79300526 | None:intergenic | 45.0% | |
| ACCATCCGGTTCAATCAAAC+CGG | + | chr1.4:79297038-79297057 | None:intergenic | 45.0% | |
| AGAAGGGAAACATGCATGTG+TGG | + | chr1.4:79299729-79299748 | None:intergenic | 45.0% | |
| AGTCAACCACAGTTGGGATA+TGG | + | chr1.4:79299980-79299999 | None:intergenic | 45.0% | |
| AGTGGATGAAGCAAAAGGAC+TGG | + | chr1.4:79299543-79299562 | None:intergenic | 45.0% | |
| CAAAGGCTAGGATCAATGCA+GGG | - | chr1.4:79300211-79300230 | MS.gene070980:intron | 45.0% | |
| CAGGCACATGCCTAAAAAGT+AGG | + | chr1.4:79298199-79298218 | None:intergenic | 45.0% | |
| CATAGGGATGGGAATAGACT+AGG | - | chr1.4:79298093-79298112 | MS.gene070980:intron | 45.0% | |
| CATCCCTATGCTTTATGACG+AGG | + | chr1.4:79298083-79298102 | None:intergenic | 45.0% | |
| CCAAAGAAGAAAGGATAGCC+CGG | - | chr1.4:79299238-79299257 | MS.gene070980:intron | 45.0% | |
| CGGGCTATCCTTTCTTCTTT+GGG | + | chr1.4:79299240-79299259 | None:intergenic | 45.0% | |
| CTCCAAGTGGATGAAGCAAA+AGG | + | chr1.4:79299548-79299567 | None:intergenic | 45.0% | |
| CTCGTCATAAAGCATAGGGA+TGG | - | chr1.4:79298081-79298100 | MS.gene070980:intron | 45.0% | |
| CTCTCATGAAACCACCAAGT+GGG | + | chr1.4:79297195-79297214 | None:intergenic | 45.0% | |
| GAGGATGAAACAGCATGAGA+AGG | - | chr1.4:79299602-79299621 | MS.gene070980:intron | 45.0% | |
| GCTGCATATGACAAGACTCA+GGG | - | chr1.4:79300462-79300481 | MS.gene070980:CDS | 45.0% | |
| GCTGGAAATTGGTTGATTGG+TGG | - | chr1.4:79299315-79299334 | MS.gene070980:intron | 45.0% | |
| GGGCTATCCTTTCTTCTTTG+GGG | + | chr1.4:79299239-79299258 | None:intergenic | 45.0% | |
| GGGGCTAACTTCTACATTGT+CGG | - | chr1.4:79300231-79300250 | MS.gene070980:intron | 45.0% | |
| GGTTCTTAGTCAACCACAGT+TGG | + | chr1.4:79299987-79300006 | None:intergenic | 45.0% | |
| GTCAGCCTAATAGGCTTAAG+AGG | - | chr1.4:79298587-79298606 | MS.gene070980:intron | 45.0% | |
| TAATGACTGATACCCGCAAG+CGG | - | chr1.4:79299493-79299512 | MS.gene070980:intron | 45.0% | |
| TCTCATGAAACCACCAAGTG+GGG | + | chr1.4:79297194-79297213 | None:intergenic | 45.0% | |
| TCTCTCATGAAACCACCAAG+TGG | + | chr1.4:79297196-79297215 | None:intergenic | 45.0% | |
| TGCTGCATATGACAAGACTC+AGG | - | chr1.4:79300461-79300480 | MS.gene070980:CDS | 45.0% | |
| TTAGCAAAGCATGGCCATTG+TGG | + | chr1.4:79299476-79299495 | None:intergenic | 45.0% | |
| TTTGGACAAAAGGGTAGCCA+TGG | + | chr1.4:79296897-79296916 | None:intergenic | 45.0% | |
| ! | AACAAGTTGAGCCAAACCAC+CGG | - | chr1.4:79297629-79297648 | MS.gene070980:intron | 45.0% |
| ! | AACTCATCACGGAGTTCTGA+AGG | + | chr1.4:79299402-79299421 | None:intergenic | 45.0% |
| ! | CTTTTGCTTCATCCACTTGG+AGG | - | chr1.4:79299546-79299565 | MS.gene070980:intron | 45.0% |
| ! | GTCCTTTTGCTTCATCCACT+TGG | - | chr1.4:79299543-79299562 | MS.gene070980:intron | 45.0% |
| ! | GTGAGAAGGGAAAGAGGTTT+TGG | + | chr1.4:79296915-79296934 | None:intergenic | 45.0% |
| !! | AAAGTATTGAGCATGGCACC+TGG | - | chr1.4:79300321-79300340 | MS.gene070980:intron | 45.0% |
| !! | ACTCATCACGGAGTTCTGAA+GGG | + | chr1.4:79299401-79299420 | None:intergenic | 45.0% |
| !! | GGCTTAAGAGGCTTTTTGAG+AGG | - | chr1.4:79298599-79298618 | MS.gene070980:intron | 45.0% |
| !! | TGAACCGGATGGTGGAAAAT+TGG | - | chr1.4:79297045-79297064 | MS.gene070980:intron | 45.0% |
| !! | TGGTTTGGCTCAACTTGTTG+AGG | + | chr1.4:79297628-79297647 | None:intergenic | 45.0% |
| !!! | CTACTTTTTAGGCATGTGCC+TGG | - | chr1.4:79298197-79298216 | MS.gene070980:CDS | 45.0% |
| !!! | GTTTTGGAGAGAGAGTGAGA+AGG | + | chr1.4:79296929-79296948 | None:intergenic | 45.0% |
| !! | AAAAAAAAAAAAAAAAAAAG+AGG | + | chr1.4:79297965-79297984 | None:intergenic | 5.0% |
| AAAGCATGGCCATTGTGGAC+AGG | + | chr1.4:79299471-79299490 | None:intergenic | 50.0% | |
| AAGAAAGGATAGCCCGGACT+TGG | - | chr1.4:79299244-79299263 | MS.gene070980:intron | 50.0% | |
| AAGCATGGCCATTGTGGACA+GGG | + | chr1.4:79299470-79299489 | None:intergenic | 50.0% | |
| AGAAAGGATAGCCCGGACTT+GGG | - | chr1.4:79299245-79299264 | MS.gene070980:intron | 50.0% | |
| AGCTTAAAAGGCCAGACCAC+AGG | + | chr1.4:79298625-79298644 | None:intergenic | 50.0% | |
| AGTTGGTCCAGCATAGTGCA+TGG | + | chr1.4:79300175-79300194 | None:intergenic | 50.0% | |
| ATGTTTAAGCGCTCGAGTCC+AGG | + | chr1.4:79300342-79300361 | None:intergenic | 50.0% | |
| ATTAGGGATGGGAATAGGCC+AGG | + | chr1.4:79298752-79298771 | None:intergenic | 50.0% | |
| CAAAGTTCCGGAACCTGTTC+CGG | - | chr1.4:79300810-79300829 | MS.gene070980:CDS | 50.0% | |
| CATATCAAGAAGCCGCTTGC+GGG | + | chr1.4:79299508-79299527 | None:intergenic | 50.0% | |
| CCAGGGCACATAAATCCATC+AGG | + | chr1.4:79300736-79300755 | None:intergenic | 50.0% | |
| CCATATCAAGAAGCCGCTTG+CGG | + | chr1.4:79299509-79299528 | None:intergenic | 50.0% | |
| CCGGGCTATCCTTTCTTCTT+TGG | + | chr1.4:79299241-79299260 | None:intergenic | 50.0% | |
| CGCAAGCGGCTTCTTGATAT+GGG | - | chr1.4:79299507-79299526 | MS.gene070980:intron | 50.0% | |
| CTGGAACGCAAACACAGCAT+CGG | + | chr1.4:79299439-79299458 | None:intergenic | 50.0% | |
| CTTTGATCCATCAAGGCCTC+AGG | - | chr1.4:79300497-79300516 | MS.gene070980:CDS | 50.0% | |
| GAGAGAGTGAGAAGGGAAAG+AGG | + | chr1.4:79296921-79296940 | None:intergenic | 50.0% | |
| GCAAAGGCTAGGATCAATGC+AGG | - | chr1.4:79300210-79300229 | MS.gene070980:intron | 50.0% | |
| GCTTTGGTATAGCCTCCAAG+TGG | + | chr1.4:79299561-79299580 | None:intergenic | 50.0% | |
| GGCCATATCAGGCTTTCAGA+AGG | + | chr1.4:79298223-79298242 | None:intergenic | 50.0% | |
| GGGCACATAAATCCATCAGG+AGG | + | chr1.4:79300733-79300752 | None:intergenic | 50.0% | |
| GGGTTCATGTGCTGAGTGAA+GGG | - | chr1.4:79297161-79297180 | MS.gene070980:intron | 50.0% | |
| GGTTTGATTGAACCGGATGG+TGG | - | chr1.4:79297037-79297056 | MS.gene070980:intron | 50.0% | |
| GTCAGCATCAGTGTCATGTC+TGG | + | chr1.4:79300618-79300637 | None:intergenic | 50.0% | |
| GTTGGTCCAGCATAGTGCAT+GGG | + | chr1.4:79300174-79300193 | None:intergenic | 50.0% | |
| TATCAGGCTTTCAGAAGGCC+AGG | + | chr1.4:79298218-79298237 | None:intergenic | 50.0% | |
| TCATGTGCTGAGTGAAGGGT+GGG | - | chr1.4:79297165-79297184 | MS.gene070980:intron | 50.0% | |
| TCTGATGGGAGGGGCAAAAT+GGG | + | chr1.4:79296960-79296979 | None:intergenic | 50.0% | |
| TGCGCCTTGTGAACTCATCA+CGG | + | chr1.4:79299413-79299432 | None:intergenic | 50.0% | |
| TGGGTTCATGTGCTGAGTGA+AGG | - | chr1.4:79297160-79297179 | MS.gene070980:intron | 50.0% | |
| TTCATGTGCTGAGTGAAGGG+TGG | - | chr1.4:79297164-79297183 | MS.gene070980:intron | 50.0% | |
| TTCTTCAGCATAAGGCAGGC+CGG | + | chr1.4:79299283-79299302 | None:intergenic | 50.0% | |
| ! | ACAAGTTGAGCCAAACCACC+GGG | - | chr1.4:79297630-79297649 | MS.gene070980:intron | 50.0% |
| ! | GATGGATTTATGTGCCCTGG+TGG | - | chr1.4:79300736-79300755 | MS.gene070980:CDS | 50.0% |
| ! | GGCCTTCTGAAAGCCTGATA+TGG | - | chr1.4:79298218-79298237 | MS.gene070980:CDS | 50.0% |
| ! | TCCGGTTTGATTGAACCGGA+TGG | - | chr1.4:79297034-79297053 | MS.gene070980:intron | 50.0% |
| !! | CCTGATGGATTTATGTGCCC+TGG | - | chr1.4:79300733-79300752 | MS.gene070980:CDS | 50.0% |
| !! | CTACGTTGACTCTGATGGGA+GGG | + | chr1.4:79296970-79296989 | None:intergenic | 50.0% |
| !! | CTCATCACGGAGTTCTGAAG+GGG | + | chr1.4:79299400-79299419 | None:intergenic | 50.0% |
| !! | GTTGATTGGTGGTGACCTAG+AGG | - | chr1.4:79299326-79299345 | MS.gene070980:intron | 50.0% |
| !! | TACGTTGACTCTGATGGGAG+GGG | + | chr1.4:79296969-79296988 | None:intergenic | 50.0% |
| !! | TTTTTGAGAGGCCTGTGGTC+TGG | - | chr1.4:79298611-79298630 | MS.gene070980:intron | 50.0% |
| AAACCACCGGGCAAGTGGTT+GGG | - | chr1.4:79297642-79297661 | MS.gene070980:intron | 55.0% | |
| AAACCTCCCAACCACTTGCC+CGG | + | chr1.4:79297651-79297670 | None:intergenic | 55.0% | |
| ACAGGCTAGCAGGCCATATC+AGG | + | chr1.4:79298234-79298253 | None:intergenic | 55.0% | |
| ACTTGGGGAACAACTGCTCC+CGG | - | chr1.4:79299261-79299280 | MS.gene070980:intron | 55.0% | |
| AGCAGTTGTTCCCCAAGTCC+GGG | + | chr1.4:79299259-79299278 | None:intergenic | 55.0% | |
| AGGCCTTGCAAAGCCTAGCT+CGG | + | chr1.4:79298119-79298138 | None:intergenic | 55.0% | |
| ATTGTCGGTAGAGACCCTGC+AGG | - | chr1.4:79300246-79300265 | MS.gene070980:intron | 55.0% | |
| CAGCATAGTGCATGGGAGAC+GGG | + | chr1.4:79300167-79300186 | None:intergenic | 55.0% | |
| CCAGCATAGTGCATGGGAGA+CGG | + | chr1.4:79300168-79300187 | None:intergenic | 55.0% | |
| CCGCAAGCGGCTTCTTGATA+TGG | - | chr1.4:79299506-79299525 | MS.gene070980:intron | 55.0% | |
| CTCTGATGGGAGGGGCAAAA+TGG | + | chr1.4:79296961-79296980 | None:intergenic | 55.0% | |
| CTGTGTTTGCGTTCCAGCTC+CGG | - | chr1.4:79299442-79299461 | MS.gene070980:intron | 55.0% | |
| GAAAAAAGTCTGGCCTGGCC+TGG | - | chr1.4:79298684-79298703 | MS.gene070980:intron | 55.0% | |
| GAAAGGATAGCCCGGACTTG+GGG | - | chr1.4:79299246-79299265 | MS.gene070980:intron | 55.0% | |
| GAGCAGTTGTTCCCCAAGTC+CGG | + | chr1.4:79299260-79299279 | None:intergenic | 55.0% | |
| GATTTATGTGCCCTGGTGGC+TGG | - | chr1.4:79300740-79300759 | MS.gene070980:CDS | 55.0% | |
| GCACTATGCTGGACCAACTG+AGG | - | chr1.4:79300176-79300195 | MS.gene070980:intron | 55.0% | |
| GGAATAGACTAGGCCGAGCT+AGG | - | chr1.4:79298103-79298122 | MS.gene070980:CDS | 55.0% | |
| GGCTTTGCAAGGCCTAAGTC+TGG | - | chr1.4:79298124-79298143 | MS.gene070980:CDS | 55.0% | |
| GTGCATGGGAGACGGGAATA+TGG | + | chr1.4:79300160-79300179 | None:intergenic | 55.0% | |
| TAAAGCCTAAGCCTGGCCTG+CGG | - | chr1.4:79298162-79298181 | MS.gene070980:CDS | 55.0% | |
| TCTTCAGCATAAGGCAGGCC+GGG | + | chr1.4:79299282-79299301 | None:intergenic | 55.0% | |
| TGAGGTGCAGTGGCATGCAA+AGG | - | chr1.4:79300194-79300213 | MS.gene070980:intron | 55.0% | |
| TGCAGATGCGCACACTTGCT+AGG | - | chr1.4:79300695-79300714 | MS.gene070980:CDS | 55.0% | |
| TGCAGTGGCATGCAAAGGCT+AGG | - | chr1.4:79300199-79300218 | MS.gene070980:intron | 55.0% | |
| !! | GAGGCTTTTTGAGAGGCCTG+TGG | - | chr1.4:79298606-79298625 | MS.gene070980:intron | 55.0% |
| !! | GCTACGTTGACTCTGATGGG+AGG | + | chr1.4:79296971-79296990 | None:intergenic | 55.0% |
| ACTAGCACCTTCCAGCCACC+AGG | + | chr1.4:79300754-79300773 | None:intergenic | 60.0% | |
| AGGCCGAGCTAGGCTTTGCA+AGG | - | chr1.4:79298113-79298132 | MS.gene070980:CDS | 60.0% | |
| CAAACCACCGGGCAAGTGGT+TGG | - | chr1.4:79297641-79297660 | MS.gene070980:intron | 60.0% | |
| CAACCACTTGCCCGGTGGTT+TGG | + | chr1.4:79297643-79297662 | None:intergenic | 60.0% | |
| CCGTCTCCCATGCACTATGC+TGG | - | chr1.4:79300165-79300184 | MS.gene070980:intron | 60.0% | |
| CTAGCACCTTCCAGCCACCA+GGG | + | chr1.4:79300753-79300772 | None:intergenic | 60.0% | |
| CTCCGGAACCCTGTCCACAA+TGG | - | chr1.4:79299459-79299478 | MS.gene070980:intron | 60.0% | |
| CTGGACCAACTGAGGTGCAG+TGG | - | chr1.4:79300184-79300203 | MS.gene070980:intron | 60.0% | |
| GCATGCCACTGCACCTCAGT+TGG | + | chr1.4:79300192-79300211 | None:intergenic | 60.0% | |
| GGCCATTGTGGACAGGGTTC+CGG | + | chr1.4:79299464-79299483 | None:intergenic | 60.0% | |
| GGTAGAGACCCTGCAGGCAT+GGG | - | chr1.4:79300252-79300271 | MS.gene070980:intron | 60.0% | |
| TATGTGCCCTGGTGGCTGGA+AGG | - | chr1.4:79300744-79300763 | MS.gene070980:CDS | 60.0% | |
| CGGTAGAGACCCTGCAGGCA+TGG | - | chr1.4:79300251-79300270 | MS.gene070980:intron | 65.0% | |
| GAGCCAAACCACCGGGCAAG+TGG | - | chr1.4:79297637-79297656 | MS.gene070980:intron | 65.0% | |
| GGATGGGAATAGGCCAGGCC+AGG | + | chr1.4:79298747-79298766 | None:intergenic | 65.0% | |
| GTAGGCCTATGACAGGCCGC+AGG | + | chr1.4:79298181-79298200 | None:intergenic | 65.0% | |
| TGTGGACAGGGTTCCGGAGC+TGG | + | chr1.4:79299458-79299477 | None:intergenic | 65.0% | |
| !! | GAAGGGTGGGCTACCCCACT+TGG | - | chr1.4:79297178-79297197 | MS.gene070980:intron | 65.0% |
| ACAGGCCGCAGGCCAGGCTT+AGG | + | chr1.4:79298170-79298189 | None:intergenic | 70.0% | |
| ACGGGATGGCCCATGCCTGC+AGG | + | chr1.4:79300264-79300283 | None:intergenic | 70.0% | |
| CCACCGGGCAAGTGGTTGGG+AGG | - | chr1.4:79297645-79297664 | MS.gene070980:intron | 70.0% | |
| CCTACGGCCTGGCCTACGAC+AGG | + | chr1.4:79298710-79298729 | None:intergenic | 70.0% | |
| CCTATGACAGGCCGCAGGCC+AGG | + | chr1.4:79298176-79298195 | None:intergenic | 70.0% | |
| CCTCCCAACCACTTGCCCGG+TGG | + | chr1.4:79297648-79297667 | None:intergenic | 70.0% | |
| CCTGGCCTGCGGCCTGTCAT+AGG | - | chr1.4:79298173-79298192 | MS.gene070980:CDS | 70.0% | |
| CCTGTCGTAGGCCAGGCCGT+AGG | - | chr1.4:79298707-79298726 | MS.gene070980:intron | 70.0% | |
| CGGGATGGCCCATGCCTGCA+GGG | + | chr1.4:79300263-79300282 | None:intergenic | 70.0% | |
| GGGAATAGGCCAGGCCAGGC+CGG | + | chr1.4:79298743-79298762 | None:intergenic | 70.0% | |
| !! | GGGTGGGCTACCCCACTTGG+TGG | - | chr1.4:79297181-79297200 | MS.gene070980:CDS | 70.0% |
| CAGGCCAGGCCGGCCTACAG+GGG | + | chr1.4:79298733-79298752 | None:intergenic | 75.0% | |
| CCAGGCCAGGCCGGCCTACA+GGG | + | chr1.4:79298734-79298753 | None:intergenic | 75.0% | |
| GCCAGGCCGTAGGCCCCTGT+AGG | - | chr1.4:79298717-79298736 | MS.gene070980:intron | 75.0% | |
| GCCTACAGGGGCCTACGGCC+TGG | + | chr1.4:79298721-79298740 | None:intergenic | 75.0% | |
| GGCCGGCCTACAGGGGCCTA+CGG | + | chr1.4:79298726-79298745 | None:intergenic | 75.0% | |
| GGCCGTAGGCCCCTGTAGGC+CGG | - | chr1.4:79298721-79298740 | MS.gene070980:intron | 75.0% | |
| GGCCTACGACAGGCCAGGCC+AGG | + | chr1.4:79298700-79298719 | None:intergenic | 75.0% | |
| GGCCTGGCCTACGACAGGCC+AGG | + | chr1.4:79298705-79298724 | None:intergenic | 75.0% | |
| GGCCTGGCCTGGCCTGTCGT+AGG | - | chr1.4:79298695-79298714 | MS.gene070980:intron | 75.0% | |
| GGCCTGGCCTGTCGTAGGCC+AGG | - | chr1.4:79298700-79298719 | MS.gene070980:intron | 75.0% | |
| TAGGCCCCTGTAGGCCGGCC+TGG | - | chr1.4:79298726-79298745 | MS.gene070980:intron | 75.0% | |
| ! | CCCTGTAGGCCGGCCTGGCC+TGG | - | chr1.4:79298731-79298750 | MS.gene070980:intron | 80.0% |
| ! | GCCAGGCCAGGCCGGCCTAC+AGG | + | chr1.4:79298735-79298754 | None:intergenic | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.4 | gene | 79296887 | 79300837 | 79296887 | ID=MS.gene070980 |
| chr1.4 | mRNA | 79296887 | 79300837 | 79296887 | ID=MS.gene070980.t1;Parent=MS.gene070980 |
| chr1.4 | exon | 79300332 | 79300837 | 79300332 | ID=MS.gene070980.t1.exon1;Parent=MS.gene070980.t1 |
| chr1.4 | CDS | 79300332 | 79300837 | 79300332 | ID=cds.MS.gene070980.t1;Parent=MS.gene070980.t1 |
| chr1.4 | exon | 79298101 | 79298506 | 79298101 | ID=MS.gene070980.t1.exon2;Parent=MS.gene070980.t1 |
| chr1.4 | CDS | 79298101 | 79298506 | 79298101 | ID=cds.MS.gene070980.t1;Parent=MS.gene070980.t1 |
| chr1.4 | exon | 79297350 | 79297610 | 79297350 | ID=MS.gene070980.t1.exon3;Parent=MS.gene070980.t1 |
| chr1.4 | CDS | 79297350 | 79297610 | 79297350 | ID=cds.MS.gene070980.t1;Parent=MS.gene070980.t1 |
| chr1.4 | exon | 79297179 | 79297265 | 79297179 | ID=MS.gene070980.t1.exon4;Parent=MS.gene070980.t1 |
| chr1.4 | CDS | 79297179 | 79297265 | 79297179 | ID=cds.MS.gene070980.t1;Parent=MS.gene070980.t1 |
| chr1.4 | exon | 79296887 | 79297024 | 79296887 | ID=MS.gene070980.t1.exon5;Parent=MS.gene070980.t1 |
| chr1.4 | CDS | 79296887 | 79297024 | 79296887 | ID=cds.MS.gene070980.t1;Parent=MS.gene070980.t1 |
| Gene Sequence |
| Protein sequence |
