Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene37680.t1 | XP_013469727.1 | 98.7 | 465 | 6 | 0 | 1 | 465 | 1 | 465 | 3.40E-273 | 950.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene37680.t1 | Q9LIK9 | 81.3 | 465 | 85 | 1 | 1 | 465 | 1 | 463 | 1.1e-227 | 790.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene37680.t1 | A0A072W0C8 | 98.7 | 465 | 6 | 0 | 1 | 465 | 1 | 465 | 2.4e-273 | 950.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene37680 | MS.gene34410 | PPI |
| MS.gene37680 | MS.gene018229 | PPI |
| MS.gene070980 | MS.gene37680 | PPI |
| MS.gene37159 | MS.gene37680 | PPI |
| MS.gene37680 | MS.gene006381 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene37680.t1 | MTR_1g102550 | 98.710 | 465 | 6 | 0 | 1 | 465 | 1 | 465 | 0.0 | 944 |
| MS.gene37680.t1 | MTR_6g016335 | 75.414 | 423 | 104 | 0 | 38 | 460 | 60 | 482 | 0.0 | 677 |
| MS.gene37680.t1 | MTR_6g016325 | 72.449 | 98 | 27 | 0 | 363 | 460 | 30 | 127 | 5.81e-46 | 156 |
| MS.gene37680.t1 | MTR_6g016320 | 95.082 | 61 | 3 | 0 | 304 | 364 | 12 | 72 | 2.69e-36 | 129 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene37680.t1 | AT3G22890 | 81.290 | 465 | 85 | 1 | 1 | 465 | 1 | 463 | 0.0 | 785 |
| MS.gene37680.t1 | AT4G14680 | 77.991 | 468 | 97 | 3 | 1 | 465 | 1 | 465 | 0.0 | 753 |
| MS.gene37680.t1 | AT5G43780 | 77.586 | 464 | 102 | 2 | 2 | 463 | 3 | 466 | 0.0 | 738 |
| MS.gene37680.t1 | AT4G14680 | 77.030 | 431 | 93 | 3 | 1 | 428 | 1 | 428 | 0.0 | 676 |
| MS.gene37680.t1 | AT1G19920 | 76.658 | 407 | 95 | 0 | 45 | 451 | 57 | 463 | 0.0 | 674 |
Find 154 sgRNAs with CRISPR-Local
Find 328 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCTTAAACATTCTTCCTTTC+AGG | 0.137830 | 1.1:-73585804 | MS.gene37680:CDS |
| CCGGGCTATCCTTTCTTCTT+TGG | 0.163995 | 1.1:+73586918 | None:intergenic |
| CCGCAAGCGGCTTCTTGATA+TGG | 0.186607 | 1.1:-73586650 | MS.gene37680:CDS |
| CGGGCTATCCTTTCTTCTTT+GGG | 0.223543 | 1.1:+73586919 | None:intergenic |
| CTCTGATGGGAGGGGCAAAA+TGG | 0.227116 | 1.1:+73589208 | None:intergenic |
| GTGAGAAGGGAAAGAGGTTT+TGG | 0.256344 | 1.1:+73589254 | None:intergenic |
| TCTGAGTTTCTGATTGGTTC+TGG | 0.283516 | 1.1:+73589161 | None:intergenic |
| CTATAACTAATGCTGGAAAT+TGG | 0.315885 | 1.1:-73586852 | MS.gene37680:CDS |
| TGACAAGACTCAGGGTAAAA+TGG | 0.330940 | 1.1:-73585686 | MS.gene37680:CDS |
| GTGCATGGGAGACGGGAATA+TGG | 0.346185 | 1.1:+73585999 | None:intergenic |
| GTGAATTGAAATGAAGCGTT+TGG | 0.352161 | 1.1:+73588938 | None:intergenic |
| GGCCATTGTGGACAGGGTTC+CGG | 0.360528 | 1.1:+73586695 | None:intergenic |
| ACAAAATCCTGAGGCCTTGA+TGG | 0.363166 | 1.1:+73585652 | None:intergenic |
| CACTAGACCGGAACAGGTTC+CGG | 0.365121 | 1.1:+73585339 | None:intergenic |
| GAGCAGTTGTTCCCCAAGTC+CGG | 0.369560 | 1.1:+73586899 | None:intergenic |
| TTTCAAAGATTGATGTTGAA+TGG | 0.369904 | 1.1:-73589026 | MS.gene37680:CDS |
| TTCAAGCAATGGCAAAGTTC+CGG | 0.370171 | 1.1:-73585358 | MS.gene37680:CDS |
| CAAAGTTCCGGAACCTGTTC+CGG | 0.376156 | 1.1:-73585346 | MS.gene37680:CDS |
| AAAATGGGTATCAAACGTTT+TGG | 0.377383 | 1.1:+73589224 | None:intergenic |
| GTTATAGTTTCTTCAGCATA+AGG | 0.393434 | 1.1:+73586868 | None:intergenic |
| CATATCAAGAAGCCGCTTGC+GGG | 0.394862 | 1.1:+73586651 | None:intergenic |
| TACTCTTTGAGAATGGCAAC+AGG | 0.396818 | 1.1:+73588793 | None:intergenic |
| CGCAAGCGGCTTCTTGATAT+GGG | 0.397191 | 1.1:-73586649 | MS.gene37680:CDS |
| TTCATCCGGTTTGATTGAAC+CGG | 0.402859 | 1.1:-73589136 | MS.gene37680:CDS |
| TGAACCGGATGGTGGAAAAT+TGG | 0.405429 | 1.1:-73589121 | MS.gene37680:CDS |
| ACGGGATGGCCCATGCCTGC+AGG | 0.410318 | 1.1:+73585895 | None:intergenic |
| GATTTATGTGCCCTGGTGGC+TGG | 0.411095 | 1.1:-73585416 | MS.gene37680:CDS |
| TGTGGACAGGGTTCCGGAGC+TGG | 0.411510 | 1.1:+73586701 | None:intergenic |
| CTTAAACATTCTTCCTTTCA+GGG | 0.415924 | 1.1:-73585803 | MS.gene37680:intron |
| CTGTGTTTGCGTTCCAGCTC+CGG | 0.416559 | 1.1:-73586714 | MS.gene37680:CDS |
| TTCAAAGATTGATGTTGAAT+GGG | 0.419355 | 1.1:-73589025 | MS.gene37680:CDS |
| ATCAGAGTCAACGTAGCAAT+TGG | 0.420035 | 1.1:-73589192 | MS.gene37680:CDS |
| AAGAAAGGATAGCCCGGACT+TGG | 0.424969 | 1.1:-73586912 | MS.gene37680:CDS |
| AATGCTGGAAATTGGTTGAT+TGG | 0.426694 | 1.1:-73586844 | MS.gene37680:CDS |
| GAGAGAGTGAGAAGGGAAAG+AGG | 0.428871 | 1.1:+73589248 | None:intergenic |
| AAGCCCATCATGATACTTGA+TGG | 0.430211 | 1.1:+73586798 | None:intergenic |
| CTTTGATCCATCAAGGCCTC+AGG | 0.430540 | 1.1:-73585659 | MS.gene37680:CDS |
| TCTGATGGGAGGGGCAAAAT+GGG | 0.437230 | 1.1:+73589209 | None:intergenic |
| TGAAACTCTGAGTTTCTGAT+TGG | 0.437359 | 1.1:+73589155 | None:intergenic |
| CGGTAGAGACCCTGCAGGCA+TGG | 0.441184 | 1.1:-73585905 | MS.gene37680:CDS |
| ATACAACACTAGACCGGAAC+AGG | 0.442459 | 1.1:+73585333 | None:intergenic |
| TATGTCTGTTCCGATTGTTT+TGG | 0.445173 | 1.1:-73588887 | MS.gene37680:CDS |
| ATCTTTGAAAGCTTTATCCT+TGG | 0.450558 | 1.1:+73589039 | None:intergenic |
| GATCTTTCTTTAGGTACTTG+AGG | 0.454226 | 1.1:-73586055 | MS.gene37680:intron |
| GGTATCTTACTCTTTGAGAA+TGG | 0.454494 | 1.1:+73588786 | None:intergenic |
| CACACCTTCAATGGCTTCCA+TGG | 0.454764 | 1.1:-73589289 | None:intergenic |
| ATGGATACAACTGTTGTCTC+TGG | 0.459319 | 1.1:+73586018 | None:intergenic |
| ATGTTTAAGCGCTCGAGTCC+AGG | 0.465204 | 1.1:+73585817 | None:intergenic |
| CCTGATGGATTTATGTGCCC+TGG | 0.467387 | 1.1:-73585423 | MS.gene37680:CDS |
| TTTCTTTAGGTACTTGAGGA+TGG | 0.469913 | 1.1:-73586051 | MS.gene37680:intron |
| GAAGAAACTATAACTAATGC+TGG | 0.471140 | 1.1:-73586859 | MS.gene37680:CDS |
| ACCATCCGGTTCAATCAAAC+CGG | 0.472422 | 1.1:+73589131 | None:intergenic |
| AAAGCATGGCCATTGTGGAC+AGG | 0.475521 | 1.1:+73586688 | None:intergenic |
| CAGAAACTCAGAGTTTCATC+CGG | 0.475836 | 1.1:-73589150 | MS.gene37680:CDS |
| CCGTCTCCCATGCACTATGC+TGG | 0.482401 | 1.1:-73585991 | MS.gene37680:CDS |
| AATTCACTTAGACTCAATGA+TGG | 0.483643 | 1.1:-73588922 | MS.gene37680:CDS |
| GCATGCCACTGCACCTCAGT+TGG | 0.486147 | 1.1:+73585967 | None:intergenic |
| AGTTTAGTGCTTTCAAGCAA+TGG | 0.487220 | 1.1:-73585369 | MS.gene37680:CDS |
| GGGTGGGCTACCCCACTTGG+TGG | 0.489758 | 1.1:-73588985 | MS.gene37680:CDS |
| CTGATGATGTACCACTTGAT+TGG | 0.492090 | 1.1:-73586576 | MS.gene37680:CDS |
| AATTGCTACGTTGACTCTGA+TGG | 0.492558 | 1.1:+73589194 | None:intergenic |
| TTCTTCAGCATAAGGCAGGC+CGG | 0.499948 | 1.1:+73586876 | None:intergenic |
| AAGTGGTACATCATCAGCTT+TGG | 0.500888 | 1.1:+73586582 | None:intergenic |
| GAAGGGTGGGCTACCCCACT+TGG | 0.502913 | 1.1:-73588988 | MS.gene37680:CDS |
| AGCAGTTGTTCCCCAAGTCC+GGG | 0.505472 | 1.1:+73586900 | None:intergenic |
| TAGTTTCTTCAGCATAAGGC+AGG | 0.507019 | 1.1:+73586872 | None:intergenic |
| GCAAAGGCTAGGATCAATGC+AGG | 0.509848 | 1.1:-73585946 | MS.gene37680:CDS |
| CAGCATAGTGCATGGGAGAC+GGG | 0.510140 | 1.1:+73585992 | None:intergenic |
| AACTCATCACGGAGTTCTGA+AGG | 0.511645 | 1.1:+73586757 | None:intergenic |
| TGCTCAATACTTTCTTTCCG+TGG | 0.512487 | 1.1:+73585845 | None:intergenic |
| TTCATGTGCTGAGTGAAGGG+TGG | 0.514044 | 1.1:-73589002 | MS.gene37680:CDS |
| GGTAGAGACCCTGCAGGCAT+GGG | 0.515724 | 1.1:-73585904 | MS.gene37680:CDS |
| TCATCAATAGCCAAAACAAT+CGG | 0.518346 | 1.1:+73588877 | None:intergenic |
| TCTTCAGCATAAGGCAGGCC+GGG | 0.518602 | 1.1:+73586877 | None:intergenic |
| TGGCATTCTTTGATCCATCA+AGG | 0.519192 | 1.1:-73585666 | MS.gene37680:CDS |
| CCAGGGCACATAAATCCATC+AGG | 0.520870 | 1.1:+73585423 | None:intergenic |
| TCATGTGCTGAGTGAAGGGT+GGG | 0.527216 | 1.1:-73589001 | MS.gene37680:CDS |
| CGGGATGGCCCATGCCTGCA+GGG | 0.527773 | 1.1:+73585896 | None:intergenic |
| AATTGAAATGAAGCGTTTGG+AGG | 0.528583 | 1.1:+73588941 | None:intergenic |
| GGGGCTAACTTCTACATTGT+CGG | 0.529113 | 1.1:-73585925 | MS.gene37680:CDS |
| ACTAGCACCTTCCAGCCACC+AGG | 0.530061 | 1.1:+73585405 | None:intergenic |
| AAGCATGGCCATTGTGGACA+GGG | 0.530459 | 1.1:+73586689 | None:intergenic |
| CTCCAAGTGGATGAAGCAAA+AGG | 0.531856 | 1.1:+73586611 | None:intergenic |
| GAACCCATCAAGTATCATGA+TGG | 0.533542 | 1.1:-73586802 | MS.gene37680:CDS |
| AGAAAGGATAGCCCGGACTT+GGG | 0.536377 | 1.1:-73586911 | MS.gene37680:CDS |
| CCAGCATAGTGCATGGGAGA+CGG | 0.537239 | 1.1:+73585991 | None:intergenic |
| GGGCTATCCTTTCTTCTTTG+GGG | 0.541088 | 1.1:+73586920 | None:intergenic |
| ATAAGCACCCCAAAGAAGAA+AGG | 0.543122 | 1.1:-73586927 | MS.gene37680:CDS |
| TGATGGGTTCTATAACCTCT+AGG | 0.543315 | 1.1:+73586815 | None:intergenic |
| AATTCATCAATTACCCTGAA+AGG | 0.548114 | 1.1:+73585790 | None:intergenic |
| ACTTGGGGAACAACTGCTCC+CGG | 0.550066 | 1.1:-73586895 | MS.gene37680:CDS |
| AACAAAGAAAGTCCTCCTGA+TGG | 0.550290 | 1.1:-73585438 | MS.gene37680:CDS |
| AAAGTATTGAGCATGGCACC+TGG | 0.552120 | 1.1:-73585835 | MS.gene37680:CDS |
| TTTGGACAAAAGGGTAGCCA+TGG | 0.552527 | 1.1:+73589272 | None:intergenic |
| TGCAGATGCGCACACTTGCT+AGG | 0.553668 | 1.1:-73585461 | MS.gene37680:intron |
| AGTGGATGAAGCAAAAGGAC+TGG | 0.554010 | 1.1:+73586616 | None:intergenic |
| TATGTGCCCTGGTGGCTGGA+AGG | 0.556507 | 1.1:-73585412 | MS.gene37680:CDS |
| CTACGTTGACTCTGATGGGA+GGG | 0.561987 | 1.1:+73589199 | None:intergenic |
| TCCGGTTTGATTGAACCGGA+TGG | 0.563694 | 1.1:-73589132 | MS.gene37680:CDS |
| ATTGCTACGTTGACTCTGAT+GGG | 0.567247 | 1.1:+73589195 | None:intergenic |
| CTCTCATGAAACCACCAAGT+GGG | 0.567308 | 1.1:+73588974 | None:intergenic |
| GTGAAGCTTTATCATTGCCA+AGG | 0.567965 | 1.1:-73589056 | MS.gene37680:CDS |
| GAAAGGATAGCCCGGACTTG+GGG | 0.571803 | 1.1:-73586910 | MS.gene37680:CDS |
| TACGTTGACTCTGATGGGAG+GGG | 0.576534 | 1.1:+73589200 | None:intergenic |
| TGGGTTCATGTGCTGAGTGA+AGG | 0.577966 | 1.1:-73589006 | MS.gene37680:CDS |
| CCAAAGAAGAAAGGATAGCC+CGG | 0.578206 | 1.1:-73586918 | MS.gene37680:CDS |
| ATTAAAATACAACACTAGAC+CGG | 0.582109 | 1.1:+73585327 | None:intergenic |
| ATGATGTACCACTTGATTGG+AGG | 0.582625 | 1.1:-73586573 | MS.gene37680:CDS |
| AACCCATCAAGTATCATGAT+GGG | 0.586308 | 1.1:-73586801 | MS.gene37680:CDS |
| GTTGGTCCAGCATAGTGCAT+GGG | 0.590516 | 1.1:+73585985 | None:intergenic |
| ATTCACTTAGACTCAATGAT+GGG | 0.594320 | 1.1:-73588921 | MS.gene37680:CDS |
| GGTTTGATTGAACCGGATGG+TGG | 0.596506 | 1.1:-73589129 | MS.gene37680:CDS |
| AGCCCATCATGATACTTGAT+GGG | 0.597356 | 1.1:+73586799 | None:intergenic |
| TGCTGCATATGACAAGACTC+AGG | 0.597492 | 1.1:-73585695 | MS.gene37680:CDS |
| GGGTTCATGTGCTGAGTGAA+GGG | 0.599411 | 1.1:-73589005 | MS.gene37680:CDS |
| GCTGGAAATTGGTTGATTGG+TGG | 0.600582 | 1.1:-73586841 | MS.gene37680:CDS |
| AGTTGGTCCAGCATAGTGCA+TGG | 0.601513 | 1.1:+73585984 | None:intergenic |
| CCATATCAAGAAGCCGCTTG+CGG | 0.602478 | 1.1:+73586650 | None:intergenic |
| TGCAGTGGCATGCAAAGGCT+AGG | 0.605138 | 1.1:-73585957 | MS.gene37680:CDS |
| CAAAGGCTAGGATCAATGCA+GGG | 0.607482 | 1.1:-73585945 | MS.gene37680:CDS |
| TGAGGTGCAGTGGCATGCAA+AGG | 0.611774 | 1.1:-73585962 | MS.gene37680:CDS |
| TTAGCAAAGCATGGCCATTG+TGG | 0.614348 | 1.1:+73586683 | None:intergenic |
| TGTCTTCATATCAGGCACAA+AGG | 0.619092 | 1.1:-73585632 | MS.gene37680:intron |
| TATCAGTCATTAGCAAAGCA+TGG | 0.624374 | 1.1:+73586674 | None:intergenic |
| CTGGAACGCAAACACAGCAT+CGG | 0.624640 | 1.1:+73586720 | None:intergenic |
| GAGGATGAAACAGCATGAGA+AGG | 0.625780 | 1.1:-73586554 | MS.gene37680:intron |
| TGGAAAATTGGTAGAGCTTG+TGG | 0.628005 | 1.1:-73589109 | MS.gene37680:CDS |
| ACTCATCACGGAGTTCTGAA+GGG | 0.630273 | 1.1:+73586758 | None:intergenic |
| CTCCGGAACCCTGTCCACAA+TGG | 0.630690 | 1.1:-73586697 | MS.gene37680:CDS |
| AACTCCGTGATGAGTTCACA+AGG | 0.634078 | 1.1:-73586750 | MS.gene37680:CDS |
| CTCATCACGGAGTTCTGAAG+GGG | 0.634921 | 1.1:+73586759 | None:intergenic |
| TGCGCCTTGTGAACTCATCA+CGG | 0.635019 | 1.1:+73586746 | None:intergenic |
| TGTTTCATCCTCCAATCAAG+TGG | 0.641105 | 1.1:+73586565 | None:intergenic |
| TAATGACTGATACCCGCAAG+CGG | 0.641357 | 1.1:-73586663 | MS.gene37680:CDS |
| GATGGATTTATGTGCCCTGG+TGG | 0.643053 | 1.1:-73585420 | MS.gene37680:CDS |
| ATTGTCGGTAGAGACCCTGC+AGG | 0.643568 | 1.1:-73585910 | MS.gene37680:CDS |
| ACTCTTTGAGAATGGCAACA+GGG | 0.643983 | 1.1:+73588794 | None:intergenic |
| TCTCATGAAACCACCAAGTG+GGG | 0.649285 | 1.1:+73588975 | None:intergenic |
| CGGAAAGAAAGTATTGAGCA+TGG | 0.652115 | 1.1:-73585842 | MS.gene37680:CDS |
| CTGGACCAACTGAGGTGCAG+TGG | 0.655057 | 1.1:-73585972 | MS.gene37680:CDS |
| TCTCTCATGAAACCACCAAG+TGG | 0.655442 | 1.1:+73588973 | None:intergenic |
| TTGATGATGATCAGAAACAT+CGG | 0.659323 | 1.1:-73588861 | MS.gene37680:CDS |
| CTAGCACCTTCCAGCCACCA+GGG | 0.661333 | 1.1:+73585406 | None:intergenic |
| GATGATCAGAAACATCGGAT+CGG | 0.661345 | 1.1:-73588856 | MS.gene37680:CDS |
| GATCTATATGATGCTGACCA+CGG | 0.665987 | 1.1:-73585862 | MS.gene37680:CDS |
| GCTACGTTGACTCTGATGGG+AGG | 0.667478 | 1.1:+73589198 | None:intergenic |
| GCTGCATATGACAAGACTCA+GGG | 0.669592 | 1.1:-73585694 | MS.gene37680:CDS |
| GTTGATTGGTGGTGACCTAG+AGG | 0.677209 | 1.1:-73586830 | MS.gene37680:CDS |
| AAAGGCTAGGATCAATGCAG+GGG | 0.692913 | 1.1:-73585944 | MS.gene37680:CDS |
| AAAATTGGTAGAGCTTGTGG+TGG | 0.695154 | 1.1:-73589106 | MS.gene37680:CDS |
| GCACTATGCTGGACCAACTG+AGG | 0.705349 | 1.1:-73585980 | MS.gene37680:CDS |
| GGGCACATAAATCCATCAGG+AGG | 0.714670 | 1.1:+73585426 | None:intergenic |
| GCTTTGGTATAGCCTCCAAG+TGG | 0.715657 | 1.1:+73586598 | None:intergenic |
| GATATGAAGACAAAATCCTG+AGG | 0.718990 | 1.1:+73585643 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATATAATAATACTTATTAGA+AGG | + | chr1.1:73588210-73588229 | None:intergenic | 10.0% |
| !! | ATTATTCATATTACTTAAAT+AGG | - | chr1.1:73587017-73587036 | MS.gene37680:intron | 10.0% |
| !! | TAAATGTATTATTATAAACT+AGG | + | chr1.1:73586892-73586911 | None:intergenic | 10.0% |
| !! | TAATAAGTATTATTATATAG+CGG | - | chr1.1:73588212-73588231 | MS.gene37680:intron | 10.0% |
| !! | TATAATAATACTTATTAGAA+GGG | + | chr1.1:73588209-73588228 | None:intergenic | 10.0% |
| !!! | AATTTATTTTTGTATTTGTT+TGG | + | chr1.1:73587307-73587326 | None:intergenic | 10.0% |
| !! | AATGAAAAAGAATTAAAACA+AGG | + | chr1.1:73586304-73586323 | None:intergenic | 15.0% |
| !! | TCTCATAAAAAAAACAAAAA+TGG | + | chr1.1:73586154-73586173 | None:intergenic | 15.0% |
| !! | TTTAGTAGGTAAATAAATTA+TGG | + | chr1.1:73588472-73588491 | None:intergenic | 15.0% |
| !! | AGAGGAAAAATATTAATCAT+AGG | + | chr1.1:73587651-73587670 | None:intergenic | 20.0% |
| !! | CAAAAACATGAAATTTACAT+AGG | + | chr1.1:73585959-73585978 | None:intergenic | 20.0% |
| !! | TATTAATCATAGGAAACAAA+TGG | + | chr1.1:73587641-73587660 | None:intergenic | 20.0% |
| !!! | AATTCTTTTTCATTTTGTGT+TGG | - | chr1.1:73586310-73586329 | MS.gene37680:intron | 20.0% |
| !!! | ACTTTTTTCTTAAATAGAGA+AGG | + | chr1.1:73587125-73587144 | None:intergenic | 20.0% |
| !!! | ATATAGATCTCTTTTTTCAA+CGG | + | chr1.1:73588747-73588766 | None:intergenic | 20.0% |
| !!! | ATATCTTTTGATCTTTCTTT+AGG | - | chr1.1:73588556-73588575 | MS.gene37680:intron | 20.0% |
| !!! | ATATGCTATTTAGTACAAAA+TGG | - | chr1.1:73588303-73588322 | MS.gene37680:intron | 20.0% |
| !!! | GGAGTAACAATATTTTTATT+GGG | + | chr1.1:73586046-73586065 | None:intergenic | 20.0% |
| !!! | TAAGATATAAGCTTTTAAAC+AGG | + | chr1.1:73586705-73586724 | None:intergenic | 20.0% |
| !!! | TATGATTAATATTTTTCCTC+TGG | - | chr1.1:73587650-73587669 | MS.gene37680:intron | 20.0% |
| !!! | TATTTCACAATGCTTTATTA+GGG | + | chr1.1:73587232-73587251 | None:intergenic | 20.0% |
| !!! | TTAAGCTTATTTAGCTTAAA+AGG | + | chr1.1:73587089-73587108 | None:intergenic | 20.0% |
| ! | AAACTATCTCAAAATCATCA+CGG | + | chr1.1:73586376-73586395 | None:intergenic | 25.0% |
| ! | AACACAAAAAGAAAAGAAAG+TGG | + | chr1.1:73588144-73588163 | None:intergenic | 25.0% |
| ! | AAGCAACTTAAACCATATTA+TGG | + | chr1.1:73588514-73588533 | None:intergenic | 25.0% |
| ! | ACAAAATCTCTAGATACATA+GGG | - | chr1.1:73587274-73587293 | MS.gene37680:intron | 25.0% |
| ! | AGCAACTTAAACCATATTAT+GGG | + | chr1.1:73588513-73588532 | None:intergenic | 25.0% |
| ! | ATAAGCTTAAAAAAAAGCCT+AGG | - | chr1.1:73587099-73587118 | MS.gene37680:intron | 25.0% |
| ! | CAATGTGATCTAAGTTTAAA+TGG | - | chr1.1:73586743-73586762 | MS.gene37680:CDS | 25.0% |
| ! | CTCTATTTAAGAAAAAAGTC+TGG | - | chr1.1:73587126-73587145 | MS.gene37680:intron | 25.0% |
| ! | GATTATTTCCATTCATTTGT+AGG | - | chr1.1:73588901-73588920 | MS.gene37680:CDS | 25.0% |
| ! | TCAAAGAGAGATTTGAAAAA+AGG | - | chr1.1:73585542-73585561 | MS.gene37680:intron | 25.0% |
| ! | TCGACAAAATACAATATTCA+GGG | + | chr1.1:73587476-73587495 | None:intergenic | 25.0% |
| ! | TCTCACTAATAAATACATTG+AGG | - | chr1.1:73588858-73588877 | MS.gene37680:CDS | 25.0% |
| ! | TGTTGTCTCTTAATTAACAA+AGG | - | chr1.1:73589124-73589143 | MS.gene37680:CDS | 25.0% |
| ! | TTCAAAGATTGATGTTGAAT+GGG | - | chr1.1:73585595-73585614 | MS.gene37680:intron | 25.0% |
| ! | TTTCAAAGATTGATGTTGAA+TGG | - | chr1.1:73585594-73585613 | MS.gene37680:intron | 25.0% |
| !! | AGTATTGTTTTCAATATGCA+GGG | - | chr1.1:73586194-73586213 | MS.gene37680:intron | 25.0% |
| !! | CTATTTCACAATGCTTTATT+AGG | + | chr1.1:73587233-73587252 | None:intergenic | 25.0% |
| !! | TAGTATTGTTTTCAATATGC+AGG | - | chr1.1:73586193-73586212 | MS.gene37680:intron | 25.0% |
| !! | TATGTATCTAGAGATTTTGT+GGG | + | chr1.1:73587274-73587293 | None:intergenic | 25.0% |
| !!! | CTCTAACTGATTTTTTTAGT+AGG | + | chr1.1:73588486-73588505 | None:intergenic | 25.0% |
| !!! | GCTTAGGCTTTAAAAAAATA+TGG | + | chr1.1:73586607-73586626 | None:intergenic | 25.0% |
| !!! | GGGAGTAACAATATTTTTAT+TGG | + | chr1.1:73586047-73586066 | None:intergenic | 25.0% |
| !!! | GTAAATTTCATGTTTTTGTG+AGG | - | chr1.1:73585961-73585980 | MS.gene37680:CDS | 25.0% |
| !!! | TATAGATCTCTTTTTTCAAC+GGG | + | chr1.1:73588746-73588765 | None:intergenic | 25.0% |
| !!! | TATGGTTTAAGTTGCTTTTT+TGG | - | chr1.1:73588517-73588536 | MS.gene37680:intron | 25.0% |
| !!! | TTGTTTTTTGTCTGTTCTTA+GGG | - | chr1.1:73585986-73586005 | MS.gene37680:CDS | 25.0% |
| !!! | TTTGTTTTTTGTCTGTTCTT+AGG | - | chr1.1:73585985-73586004 | MS.gene37680:CDS | 25.0% |
| AAATACATTGAGGTTCACTT+AGG | - | chr1.1:73588868-73588887 | MS.gene37680:CDS | 30.0% | |
| AATTCACTTAGACTCAATGA+TGG | - | chr1.1:73585698-73585717 | MS.gene37680:CDS | 30.0% | |
| AATTCATCAATTACCCTGAA+AGG | + | chr1.1:73588833-73588852 | None:intergenic | 30.0% | |
| ACATGAACAAGAGAAGAAAA+AGG | + | chr1.1:73585858-73585877 | None:intergenic | 30.0% | |
| AGCATTGTGAAATAGACTAT+AGG | - | chr1.1:73587238-73587257 | MS.gene37680:intron | 30.0% | |
| AGCCAATCATAGAGTTTAAT+TGG | - | chr1.1:73586232-73586251 | MS.gene37680:intron | 30.0% | |
| ATTATTATATAGCGGCGAAT+CGG | - | chr1.1:73588220-73588239 | MS.gene37680:intron | 30.0% | |
| ATTCACTTAGACTCAATGAT+GGG | - | chr1.1:73585699-73585718 | MS.gene37680:CDS | 30.0% | |
| CACAAAATCTCTAGATACAT+AGG | - | chr1.1:73587273-73587292 | MS.gene37680:intron | 30.0% | |
| CATGTTCTATTTACCAATGT+TGG | - | chr1.1:73586476-73586495 | MS.gene37680:intron | 30.0% | |
| CTATAACTAATGCTGGAAAT+TGG | - | chr1.1:73587768-73587787 | MS.gene37680:intron | 30.0% | |
| CTTAAACATTCTTCCTTTCA+GGG | - | chr1.1:73588817-73588836 | MS.gene37680:CDS | 30.0% | |
| GAAGAAACTATAACTAATGC+TGG | - | chr1.1:73587761-73587780 | MS.gene37680:intron | 30.0% | |
| GACCAATTAAACTCTATGAT+TGG | + | chr1.1:73586237-73586256 | None:intergenic | 30.0% | |
| GCAACTTAAACCATATTATG+GGG | + | chr1.1:73588512-73588531 | None:intergenic | 30.0% | |
| GGAATATAATCTGGTAATCT+AGG | - | chr1.1:73586010-73586029 | MS.gene37680:CDS | 30.0% | |
| GTCGACAAAATACAATATTC+AGG | + | chr1.1:73587477-73587496 | None:intergenic | 30.0% | |
| GTTATAGTTTCTTCAGCATA+AGG | + | chr1.1:73587755-73587774 | None:intergenic | 30.0% | |
| TCATCAATAGCCAAAACAAT+CGG | + | chr1.1:73585746-73585765 | None:intergenic | 30.0% | |
| TCTTGAACTTATCTTGAACA+AGG | + | chr1.1:73587348-73587367 | None:intergenic | 30.0% | |
| TGTGGAAAAGCAAGAAATTA+AGG | + | chr1.1:73588175-73588194 | None:intergenic | 30.0% | |
| TGTTGAGGATTAATCAAGTT+GGG | + | chr1.1:73586067-73586086 | None:intergenic | 30.0% | |
| TTGAAATTCTTGTTGCGAAT+AGG | - | chr1.1:73587426-73587445 | MS.gene37680:intron | 30.0% | |
| TTGTGTTGGAATGTTATGAT+TGG | - | chr1.1:73586324-73586343 | MS.gene37680:intron | 30.0% | |
| TTGTTGAGGATTAATCAAGT+TGG | + | chr1.1:73586068-73586087 | None:intergenic | 30.0% | |
| ! | AAAATGGGTATCAAACGTTT+TGG | + | chr1.1:73585399-73585418 | None:intergenic | 30.0% |
| ! | ATAATCAACACGAGGTTTTA+GGG | - | chr1.1:73586807-73586826 | MS.gene37680:CDS | 30.0% |
| ! | ATCTTTGAAAGCTTTATCCT+TGG | + | chr1.1:73585584-73585603 | None:intergenic | 30.0% |
| ! | CTATGTATCTAGAGATTTTG+TGG | + | chr1.1:73587275-73587294 | None:intergenic | 30.0% |
| ! | GGTATGTTATTCTGTGATTT+TGG | - | chr1.1:73589009-73589028 | MS.gene37680:CDS | 30.0% |
| !! | AGGCTTTAAAAAAATATGGC+AGG | + | chr1.1:73586603-73586622 | None:intergenic | 30.0% |
| !! | AGTTGCTCTTTTTGATTCTA+AGG | - | chr1.1:73585799-73585818 | MS.gene37680:intron | 30.0% |
| !! | GTTGCTCTTTTTGATTCTAA+GGG | - | chr1.1:73585800-73585819 | MS.gene37680:intron | 30.0% |
| !! | TTGATGATGATCAGAAACAT+CGG | - | chr1.1:73585759-73585778 | MS.gene37680:intron | 30.0% |
| !!! | ATTTTTTTAAAGCCTAAGCC+TGG | - | chr1.1:73586608-73586627 | MS.gene37680:CDS | 30.0% |
| !!! | GTTTAAGTTGCTTTTTTGGA+TGG | - | chr1.1:73588521-73588540 | MS.gene37680:intron | 30.0% |
| !!! | TGTTTTTTGTCTGTTCTTAG+GGG | - | chr1.1:73585987-73586006 | MS.gene37680:CDS | 30.0% |
| !!! | TTCTGTGATTTTGGAACATA+CGG | - | chr1.1:73589018-73589037 | MS.gene37680:CDS | 30.0% |
| AAAAGCCTCTTAAGCCTATT+AGG | + | chr1.1:73587047-73587066 | None:intergenic | 35.0% | |
| AACCCATCAAGTATCATGAT+GGG | - | chr1.1:73587819-73587838 | MS.gene37680:intron | 35.0% | |
| AATACCTCGTCATAAAGCAT+AGG | - | chr1.1:73586529-73586548 | MS.gene37680:intron | 35.0% | |
| AATGCTGGAAATTGGTTGAT+TGG | - | chr1.1:73587776-73587795 | MS.gene37680:intron | 35.0% | |
| ACAAGGACACAAAACATGTA+CGG | + | chr1.1:73586287-73586306 | None:intergenic | 35.0% | |
| AGAAGCAATGTTGTCAATCA+CGG | + | chr1.1:73588405-73588424 | None:intergenic | 35.0% | |
| AGTTTAGTGCTTTCAAGCAA+TGG | - | chr1.1:73589251-73589270 | MS.gene37680:CDS | 35.0% | |
| ATACCTCGTCATAAAGCATA+GGG | - | chr1.1:73586530-73586549 | MS.gene37680:intron | 35.0% | |
| ATCATCAGAACAACCAACAT+TGG | + | chr1.1:73586492-73586511 | None:intergenic | 35.0% | |
| CACGGCTCACAAAAATTTAA+CGG | + | chr1.1:73588387-73588406 | None:intergenic | 35.0% | |
| CTTAAATAGGTCAGCCTAAT+AGG | - | chr1.1:73587030-73587049 | MS.gene37680:intron | 35.0% | |
| GATATGAAGACAAAATCCTG+AGG | + | chr1.1:73588980-73588999 | None:intergenic | 35.0% | |
| GATCTTTCTTTAGGTACTTG+AGG | - | chr1.1:73588565-73588584 | MS.gene37680:intron | 35.0% | |
| GCTTAAACATTCTTCCTTTC+AGG | - | chr1.1:73588816-73588835 | MS.gene37680:CDS | 35.0% | |
| GTTGGAATGTTATGATTGGT+TGG | - | chr1.1:73586328-73586347 | MS.gene37680:intron | 35.0% | |
| TATCAGTCATTAGCAAAGCA+TGG | + | chr1.1:73587949-73587968 | None:intergenic | 35.0% | |
| TGAAACTCTGAGTTTCTGAT+TGG | + | chr1.1:73585468-73585487 | None:intergenic | 35.0% | |
| TTCTTAAATAGAGAAGGCCT+AGG | + | chr1.1:73587119-73587138 | None:intergenic | 35.0% | |
| TTTAAGAAAAAAGTCTGGCC+TGG | - | chr1.1:73587131-73587150 | MS.gene37680:intron | 35.0% | |
| TTTCTTTAGGTACTTGAGGA+TGG | - | chr1.1:73588569-73588588 | MS.gene37680:intron | 35.0% | |
| ! | AATTGAAATGAAGCGTTTGG+AGG | + | chr1.1:73585682-73585701 | None:intergenic | 35.0% |
| ! | ACTCTATGATTGGCTAAAGA+AGG | + | chr1.1:73586227-73586246 | None:intergenic | 35.0% |
| ! | ATGTTGGTTGTTCTGATGAT+TGG | - | chr1.1:73586492-73586511 | MS.gene37680:intron | 35.0% |
| ! | CACAATGCTTTATTAGGGAT+GGG | + | chr1.1:73587227-73587246 | None:intergenic | 35.0% |
| ! | CAGGATTTTGTCTTCATATC+AGG | - | chr1.1:73588980-73588999 | MS.gene37680:CDS | 35.0% |
| ! | GATAATCAACACGAGGTTTT+AGG | - | chr1.1:73586806-73586825 | MS.gene37680:CDS | 35.0% |
| ! | GGTATCTTACTCTTTGAGAA+TGG | + | chr1.1:73585837-73585856 | None:intergenic | 35.0% |
| ! | GTGAATTGAAATGAAGCGTT+TGG | + | chr1.1:73585685-73585704 | None:intergenic | 35.0% |
| ! | TATGTCTGTTCCGATTGTTT+TGG | - | chr1.1:73585733-73585752 | MS.gene37680:intron | 35.0% |
| ! | TCACAATGCTTTATTAGGGA+TGG | + | chr1.1:73587228-73587247 | None:intergenic | 35.0% |
| !! | CTCTTTTGATAATCAACACG+AGG | - | chr1.1:73586799-73586818 | MS.gene37680:CDS | 35.0% |
| !!! | GAAAGAGGTTTTGGACAAAA+GGG | + | chr1.1:73585360-73585379 | None:intergenic | 35.0% |
| !!! | GTTTTTTGTCTGTTCTTAGG+GGG | - | chr1.1:73585988-73586007 | MS.gene37680:CDS | 35.0% |
| !!! | TTTTTTGTCTGTTCTTAGGG+GGG | - | chr1.1:73585989-73586008 | MS.gene37680:CDS | 35.0% |
| AAAATTGGTAGAGCTTGTGG+TGG | - | chr1.1:73585514-73585533 | MS.gene37680:intron | 40.0% | |
| AACAAAGAAAGTCCTCCTGA+TGG | - | chr1.1:73589182-73589201 | MS.gene37680:CDS | 40.0% | |
| AAGCCCATCATGATACTTGA+TGG | + | chr1.1:73587825-73587844 | None:intergenic | 40.0% | |
| AAGTGGTACATCATCAGCTT+TGG | + | chr1.1:73588041-73588060 | None:intergenic | 40.0% | |
| AGAGTCTCATTGTTGAAGCT+AGG | - | chr1.1:73588118-73588137 | MS.gene37680:intron | 40.0% | |
| AGCCCATCATGATACTTGAT+GGG | + | chr1.1:73587824-73587843 | None:intergenic | 40.0% | |
| ATAAGCACCCCAAAGAAGAA+AGG | - | chr1.1:73587693-73587712 | MS.gene37680:intron | 40.0% | |
| ATCAGAGTCAACGTAGCAAT+TGG | - | chr1.1:73585428-73585447 | MS.gene37680:CDS | 40.0% | |
| ATGATGTACCACTTGATTGG+AGG | - | chr1.1:73588047-73588066 | MS.gene37680:intron | 40.0% | |
| ATGGATACAACTGTTGTCTC+TGG | + | chr1.1:73588605-73588624 | None:intergenic | 40.0% | |
| CAGAAACTCAGAGTTTCATC+CGG | - | chr1.1:73585470-73585489 | MS.gene37680:intron | 40.0% | |
| CTAAAAAGTAGGCCTATGAC+AGG | + | chr1.1:73586641-73586660 | None:intergenic | 40.0% | |
| GAACCCATCAAGTATCATGA+TGG | - | chr1.1:73587818-73587837 | MS.gene37680:intron | 40.0% | |
| GAGGCAAACAATGACAATAG+AGG | + | chr1.1:73586400-73586419 | None:intergenic | 40.0% | |
| GATCTATATGATGCTGACCA+CGG | - | chr1.1:73588758-73588777 | MS.gene37680:intron | 40.0% | |
| GATGATCAGAAACATCGGAT+CGG | - | chr1.1:73585764-73585783 | MS.gene37680:intron | 40.0% | |
| GGTTGTTCTGATGATTGGTA+AGG | - | chr1.1:73586497-73586516 | MS.gene37680:intron | 40.0% | |
| GTTAGAGCTTCCCCATAATA+TGG | - | chr1.1:73588499-73588518 | MS.gene37680:intron | 40.0% | |
| GTTCTTAGTCAACCACAGTT+GGG | + | chr1.1:73588450-73588469 | None:intergenic | 40.0% | |
| TAGTTTCTTCAGCATAAGGC+AGG | + | chr1.1:73587751-73587770 | None:intergenic | 40.0% | |
| TCGTCATAAAGCATAGGGAT+GGG | - | chr1.1:73586535-73586554 | MS.gene37680:intron | 40.0% | |
| TCTTAGGGGGGAATATAATC+TGG | - | chr1.1:73586001-73586020 | MS.gene37680:CDS | 40.0% | |
| TGACAAGACTCAGGGTAAAA+TGG | - | chr1.1:73588934-73588953 | MS.gene37680:CDS | 40.0% | |
| TGCAGCAACCTACAAATGAA+TGG | + | chr1.1:73588912-73588931 | None:intergenic | 40.0% | |
| TGCTCAATACTTTCTTTCCG+TGG | + | chr1.1:73588778-73588797 | None:intergenic | 40.0% | |
| TGGAAAATTGGTAGAGCTTG+TGG | - | chr1.1:73585511-73585530 | MS.gene37680:intron | 40.0% | |
| TGGCATTCTTTGATCCATCA+AGG | - | chr1.1:73588954-73588973 | MS.gene37680:CDS | 40.0% | |
| TGTCTTCATATCAGGCACAA+AGG | - | chr1.1:73588988-73589007 | MS.gene37680:CDS | 40.0% | |
| TGTTTCATCCTCCAATCAAG+TGG | + | chr1.1:73588058-73588077 | None:intergenic | 40.0% | |
| TTCAAGCAATGGCAAAGTTC+CGG | - | chr1.1:73589262-73589281 | MS.gene37680:CDS | 40.0% | |
| TTCGATACTGAAATAGCCAG+AGG | + | chr1.1:73587669-73587688 | None:intergenic | 40.0% | |
| ! | AAGCTTTTAAACAGGCTAGC+AGG | + | chr1.1:73586697-73586716 | None:intergenic | 40.0% |
| ! | ACTCTTTGAGAATGGCAACA+GGG | + | chr1.1:73585829-73585848 | None:intergenic | 40.0% |
| ! | CTGATGATGTACCACTTGAT+TGG | - | chr1.1:73588044-73588063 | MS.gene37680:intron | 40.0% |
| ! | GCTTTATTAGGGATGGGAAT+AGG | + | chr1.1:73587221-73587240 | None:intergenic | 40.0% |
| ! | GTGAAGCTTTATCATTGCCA+AGG | - | chr1.1:73585564-73585583 | MS.gene37680:intron | 40.0% |
| ! | GTTTTACCATATCCCAACTG+TGG | - | chr1.1:73588435-73588454 | MS.gene37680:intron | 40.0% |
| ! | TACTCTTTGAGAATGGCAAC+AGG | + | chr1.1:73585830-73585849 | None:intergenic | 40.0% |
| ! | TCTACCAATTTTCCACCATC+CGG | + | chr1.1:73585506-73585525 | None:intergenic | 40.0% |
| ! | TCTGAGTTTCTGATTGGTTC+TGG | + | chr1.1:73585462-73585481 | None:intergenic | 40.0% |
| ! | TTCATCCGGTTTGATTGAAC+CGG | - | chr1.1:73585484-73585503 | MS.gene37680:intron | 40.0% |
| !! | AATTGCTACGTTGACTCTGA+TGG | + | chr1.1:73585429-73585448 | None:intergenic | 40.0% |
| !! | ATTGCTACGTTGACTCTGAT+GGG | + | chr1.1:73585428-73585447 | None:intergenic | 40.0% |
| !! | CGGAAAGAAAGTATTGAGCA+TGG | - | chr1.1:73588778-73588797 | MS.gene37680:intron | 40.0% |
| !! | TGATGGGTTCTATAACCTCT+AGG | + | chr1.1:73587808-73587827 | None:intergenic | 40.0% |
| !! | TTTTGGAGAGAGAGTGAGAA+GGG | + | chr1.1:73585382-73585401 | None:intergenic | 40.0% |
| !!! | CTGTCATAGGCCTACTTTTT+AGG | - | chr1.1:73586639-73586658 | MS.gene37680:CDS | 40.0% |
| !!! | GATCTCTTTTTTCAACGGGA+TGG | + | chr1.1:73588742-73588761 | None:intergenic | 40.0% |
| !!! | GGAAAGAGGTTTTGGACAAA+AGG | + | chr1.1:73585361-73585380 | None:intergenic | 40.0% |
| AAAGGCTAGGATCAATGCAG+GGG | - | chr1.1:73588676-73588695 | MS.gene37680:intron | 45.0% | |
| AAATATGGCAGGCCAGACTT+AGG | + | chr1.1:73586592-73586611 | None:intergenic | 45.0% | |
| AACTCCGTGATGAGTTCACA+AGG | - | chr1.1:73587870-73587889 | MS.gene37680:intron | 45.0% | |
| ACAAAATCCTGAGGCCTTGA+TGG | + | chr1.1:73588971-73588990 | None:intergenic | 45.0% | |
| ACCATCCGGTTCAATCAAAC+CGG | + | chr1.1:73585492-73585511 | None:intergenic | 45.0% | |
| AGAAGGGAAACATGCATGTG+TGG | + | chr1.1:73588193-73588212 | None:intergenic | 45.0% | |
| AGTCAACCACAGTTGGGATA+TGG | + | chr1.1:73588444-73588463 | None:intergenic | 45.0% | |
| AGTGGATGAAGCAAAAGGAC+TGG | + | chr1.1:73588007-73588026 | None:intergenic | 45.0% | |
| CAAAGGCTAGGATCAATGCA+GGG | - | chr1.1:73588675-73588694 | MS.gene37680:intron | 45.0% | |
| CAGGCACATGCCTAAAAAGT+AGG | + | chr1.1:73586652-73586671 | None:intergenic | 45.0% | |
| CATAGGGATGGGAATAGACT+AGG | - | chr1.1:73586546-73586565 | MS.gene37680:intron | 45.0% | |
| CATCCCTATGCTTTATGACG+AGG | + | chr1.1:73586536-73586555 | None:intergenic | 45.0% | |
| CCAAAGAAGAAAGGATAGCC+CGG | - | chr1.1:73587702-73587721 | MS.gene37680:intron | 45.0% | |
| CGGGCTATCCTTTCTTCTTT+GGG | + | chr1.1:73587704-73587723 | None:intergenic | 45.0% | |
| CTCCAAGTGGATGAAGCAAA+AGG | + | chr1.1:73588012-73588031 | None:intergenic | 45.0% | |
| CTCGTCATAAAGCATAGGGA+TGG | - | chr1.1:73586534-73586553 | MS.gene37680:intron | 45.0% | |
| CTCTCATGAAACCACCAAGT+GGG | + | chr1.1:73585649-73585668 | None:intergenic | 45.0% | |
| GAGGATGAAACAGCATGAGA+AGG | - | chr1.1:73588066-73588085 | MS.gene37680:intron | 45.0% | |
| GCTGCATATGACAAGACTCA+GGG | - | chr1.1:73588926-73588945 | MS.gene37680:CDS | 45.0% | |
| GCTGGAAATTGGTTGATTGG+TGG | - | chr1.1:73587779-73587798 | MS.gene37680:intron | 45.0% | |
| GGGCTATCCTTTCTTCTTTG+GGG | + | chr1.1:73587703-73587722 | None:intergenic | 45.0% | |
| GGGGCTAACTTCTACATTGT+CGG | - | chr1.1:73588695-73588714 | MS.gene37680:intron | 45.0% | |
| GGTTCTTAGTCAACCACAGT+TGG | + | chr1.1:73588451-73588470 | None:intergenic | 45.0% | |
| GTCAGCCTAATAGGCTTAAG+AGG | - | chr1.1:73587039-73587058 | MS.gene37680:intron | 45.0% | |
| TAATGACTGATACCCGCAAG+CGG | - | chr1.1:73587957-73587976 | MS.gene37680:intron | 45.0% | |
| TCTCATGAAACCACCAAGTG+GGG | + | chr1.1:73585648-73585667 | None:intergenic | 45.0% | |
| TCTCTCATGAAACCACCAAG+TGG | + | chr1.1:73585650-73585669 | None:intergenic | 45.0% | |
| TGCTGCATATGACAAGACTC+AGG | - | chr1.1:73588925-73588944 | MS.gene37680:CDS | 45.0% | |
| TTAGCAAAGCATGGCCATTG+TGG | + | chr1.1:73587940-73587959 | None:intergenic | 45.0% | |
| TTTGGACAAAAGGGTAGCCA+TGG | + | chr1.1:73585351-73585370 | None:intergenic | 45.0% | |
| ! | AACAAGTTGAGCCAAACCAC+CGG | - | chr1.1:73586083-73586102 | MS.gene37680:intron | 45.0% |
| ! | AACTCATCACGGAGTTCTGA+AGG | + | chr1.1:73587866-73587885 | None:intergenic | 45.0% |
| ! | CTTTTGCTTCATCCACTTGG+AGG | - | chr1.1:73588010-73588029 | MS.gene37680:intron | 45.0% |
| ! | GTCCTTTTGCTTCATCCACT+TGG | - | chr1.1:73588007-73588026 | MS.gene37680:intron | 45.0% |
| ! | GTGAGAAGGGAAAGAGGTTT+TGG | + | chr1.1:73585369-73585388 | None:intergenic | 45.0% |
| !! | AAAGTATTGAGCATGGCACC+TGG | - | chr1.1:73588785-73588804 | MS.gene37680:intron | 45.0% |
| !! | ACTCATCACGGAGTTCTGAA+GGG | + | chr1.1:73587865-73587884 | None:intergenic | 45.0% |
| !! | GGCTTAAGAGGCTTTTTGAG+AGG | - | chr1.1:73587051-73587070 | MS.gene37680:intron | 45.0% |
| !! | TGAACCGGATGGTGGAAAAT+TGG | - | chr1.1:73585499-73585518 | MS.gene37680:intron | 45.0% |
| !! | TGGTTTGGCTCAACTTGTTG+AGG | + | chr1.1:73586082-73586101 | None:intergenic | 45.0% |
| !!! | CTACTTTTTAGGCATGTGCC+TGG | - | chr1.1:73586650-73586669 | MS.gene37680:CDS | 45.0% |
| !!! | GTTTTGGAGAGAGAGTGAGA+AGG | + | chr1.1:73585383-73585402 | None:intergenic | 45.0% |
| !! | TAAAAAAAAAAAAAAAAAAG+AGG | + | chr1.1:73586419-73586438 | None:intergenic | 5.0% |
| AAAGCATGGCCATTGTGGAC+AGG | + | chr1.1:73587935-73587954 | None:intergenic | 50.0% | |
| AAGAAAGGATAGCCCGGACT+TGG | - | chr1.1:73587708-73587727 | MS.gene37680:intron | 50.0% | |
| AAGCATGGCCATTGTGGACA+GGG | + | chr1.1:73587934-73587953 | None:intergenic | 50.0% | |
| AGAAAGGATAGCCCGGACTT+GGG | - | chr1.1:73587709-73587728 | MS.gene37680:intron | 50.0% | |
| AGCTTAAAAGGCCAGACCAC+AGG | + | chr1.1:73587077-73587096 | None:intergenic | 50.0% | |
| AGTTGGTCCAGCATAGTGCA+TGG | + | chr1.1:73588639-73588658 | None:intergenic | 50.0% | |
| ATGTTTAAGCGCTCGAGTCC+AGG | + | chr1.1:73588806-73588825 | None:intergenic | 50.0% | |
| ATTAGGGATGGGAATAGGCC+AGG | + | chr1.1:73587216-73587235 | None:intergenic | 50.0% | |
| CAAAGTTCCGGAACCTGTTC+CGG | - | chr1.1:73589274-73589293 | MS.gene37680:CDS | 50.0% | |
| CATATCAAGAAGCCGCTTGC+GGG | + | chr1.1:73587972-73587991 | None:intergenic | 50.0% | |
| CCAGGGCACATAAATCCATC+AGG | + | chr1.1:73589200-73589219 | None:intergenic | 50.0% | |
| CCATATCAAGAAGCCGCTTG+CGG | + | chr1.1:73587973-73587992 | None:intergenic | 50.0% | |
| CCGGGCTATCCTTTCTTCTT+TGG | + | chr1.1:73587705-73587724 | None:intergenic | 50.0% | |
| CGCAAGCGGCTTCTTGATAT+GGG | - | chr1.1:73587971-73587990 | MS.gene37680:intron | 50.0% | |
| CTGGAACGCAAACACAGCAT+CGG | + | chr1.1:73587903-73587922 | None:intergenic | 50.0% | |
| CTTTGATCCATCAAGGCCTC+AGG | - | chr1.1:73588961-73588980 | MS.gene37680:CDS | 50.0% | |
| GAGAGAGTGAGAAGGGAAAG+AGG | + | chr1.1:73585375-73585394 | None:intergenic | 50.0% | |
| GCAAAGGCTAGGATCAATGC+AGG | - | chr1.1:73588674-73588693 | MS.gene37680:intron | 50.0% | |
| GCTTTGGTATAGCCTCCAAG+TGG | + | chr1.1:73588025-73588044 | None:intergenic | 50.0% | |
| GGCCATATCAGGCTTTCAGA+AGG | + | chr1.1:73586676-73586695 | None:intergenic | 50.0% | |
| GGGCACATAAATCCATCAGG+AGG | + | chr1.1:73589197-73589216 | None:intergenic | 50.0% | |
| GGGTTCATGTGCTGAGTGAA+GGG | - | chr1.1:73585615-73585634 | MS.gene37680:intron | 50.0% | |
| GGTTTGATTGAACCGGATGG+TGG | - | chr1.1:73585491-73585510 | MS.gene37680:intron | 50.0% | |
| GTCAGCATCAGTGTCATGTC+TGG | + | chr1.1:73589082-73589101 | None:intergenic | 50.0% | |
| GTTGGTCCAGCATAGTGCAT+GGG | + | chr1.1:73588638-73588657 | None:intergenic | 50.0% | |
| TATCAGGCTTTCAGAAGGCC+AGG | + | chr1.1:73586671-73586690 | None:intergenic | 50.0% | |
| TCATGTGCTGAGTGAAGGGT+GGG | - | chr1.1:73585619-73585638 | MS.gene37680:intron | 50.0% | |
| TCTGATGGGAGGGGCAAAAT+GGG | + | chr1.1:73585414-73585433 | None:intergenic | 50.0% | |
| TGCGCCTTGTGAACTCATCA+CGG | + | chr1.1:73587877-73587896 | None:intergenic | 50.0% | |
| TGGGTTCATGTGCTGAGTGA+AGG | - | chr1.1:73585614-73585633 | MS.gene37680:intron | 50.0% | |
| TTCATGTGCTGAGTGAAGGG+TGG | - | chr1.1:73585618-73585637 | MS.gene37680:intron | 50.0% | |
| TTCTTCAGCATAAGGCAGGC+CGG | + | chr1.1:73587747-73587766 | None:intergenic | 50.0% | |
| ! | ACAAGTTGAGCCAAACCACC+GGG | - | chr1.1:73586084-73586103 | MS.gene37680:intron | 50.0% |
| ! | GATGGATTTATGTGCCCTGG+TGG | - | chr1.1:73589200-73589219 | MS.gene37680:CDS | 50.0% |
| ! | GGCCTTCTGAAAGCCTGATA+TGG | - | chr1.1:73586671-73586690 | MS.gene37680:CDS | 50.0% |
| ! | TCCGGTTTGATTGAACCGGA+TGG | - | chr1.1:73585488-73585507 | MS.gene37680:intron | 50.0% |
| !! | CCTGATGGATTTATGTGCCC+TGG | - | chr1.1:73589197-73589216 | MS.gene37680:CDS | 50.0% |
| !! | CTACGTTGACTCTGATGGGA+GGG | + | chr1.1:73585424-73585443 | None:intergenic | 50.0% |
| !! | CTCATCACGGAGTTCTGAAG+GGG | + | chr1.1:73587864-73587883 | None:intergenic | 50.0% |
| !! | GTTGATTGGTGGTGACCTAG+AGG | - | chr1.1:73587790-73587809 | MS.gene37680:intron | 50.0% |
| !! | TACGTTGACTCTGATGGGAG+GGG | + | chr1.1:73585423-73585442 | None:intergenic | 50.0% |
| !! | TTTTTGAGAGGCCTGTGGTC+TGG | - | chr1.1:73587063-73587082 | MS.gene37680:intron | 50.0% |
| AAACCACCGGGCAAGTGGTT+GGG | - | chr1.1:73586096-73586115 | MS.gene37680:intron | 55.0% | |
| AAACCTCCCAACCACTTGCC+CGG | + | chr1.1:73586105-73586124 | None:intergenic | 55.0% | |
| ACAGGCTAGCAGGCCATATC+AGG | + | chr1.1:73586687-73586706 | None:intergenic | 55.0% | |
| ACTTGGGGAACAACTGCTCC+CGG | - | chr1.1:73587725-73587744 | MS.gene37680:intron | 55.0% | |
| AGCAGTTGTTCCCCAAGTCC+GGG | + | chr1.1:73587723-73587742 | None:intergenic | 55.0% | |
| AGGCCTTGCAAAGCCTAGCT+CGG | + | chr1.1:73586572-73586591 | None:intergenic | 55.0% | |
| ATTGTCGGTAGAGACCCTGC+AGG | - | chr1.1:73588710-73588729 | MS.gene37680:intron | 55.0% | |
| CAGCATAGTGCATGGGAGAC+GGG | + | chr1.1:73588631-73588650 | None:intergenic | 55.0% | |
| CCAGCATAGTGCATGGGAGA+CGG | + | chr1.1:73588632-73588651 | None:intergenic | 55.0% | |
| CCGCAAGCGGCTTCTTGATA+TGG | - | chr1.1:73587970-73587989 | MS.gene37680:intron | 55.0% | |
| CTCTGATGGGAGGGGCAAAA+TGG | + | chr1.1:73585415-73585434 | None:intergenic | 55.0% | |
| CTGTGTTTGCGTTCCAGCTC+CGG | - | chr1.1:73587906-73587925 | MS.gene37680:intron | 55.0% | |
| GAAAAAAGTCTGGCCTGGCC+TGG | - | chr1.1:73587136-73587155 | MS.gene37680:intron | 55.0% | |
| GAAAGGATAGCCCGGACTTG+GGG | - | chr1.1:73587710-73587729 | MS.gene37680:intron | 55.0% | |
| GAGCAGTTGTTCCCCAAGTC+CGG | + | chr1.1:73587724-73587743 | None:intergenic | 55.0% | |
| GATTTATGTGCCCTGGTGGC+TGG | - | chr1.1:73589204-73589223 | MS.gene37680:CDS | 55.0% | |
| GCACTATGCTGGACCAACTG+AGG | - | chr1.1:73588640-73588659 | MS.gene37680:intron | 55.0% | |
| GGAATAGACTAGGCCGAGCT+AGG | - | chr1.1:73586556-73586575 | MS.gene37680:CDS | 55.0% | |
| GGCTTTGCAAGGCCTAAGTC+TGG | - | chr1.1:73586577-73586596 | MS.gene37680:CDS | 55.0% | |
| GTGCATGGGAGACGGGAATA+TGG | + | chr1.1:73588624-73588643 | None:intergenic | 55.0% | |
| TAAAGCCTAAGCCTGGCCTG+CGG | - | chr1.1:73586615-73586634 | MS.gene37680:CDS | 55.0% | |
| TCTTCAGCATAAGGCAGGCC+GGG | + | chr1.1:73587746-73587765 | None:intergenic | 55.0% | |
| TGAGGTGCAGTGGCATGCAA+AGG | - | chr1.1:73588658-73588677 | MS.gene37680:intron | 55.0% | |
| TGCAGATGCGCACACTTGCT+AGG | - | chr1.1:73589159-73589178 | MS.gene37680:CDS | 55.0% | |
| TGCAGTGGCATGCAAAGGCT+AGG | - | chr1.1:73588663-73588682 | MS.gene37680:intron | 55.0% | |
| !! | GAGGCTTTTTGAGAGGCCTG+TGG | - | chr1.1:73587058-73587077 | MS.gene37680:intron | 55.0% |
| !! | GCTACGTTGACTCTGATGGG+AGG | + | chr1.1:73585425-73585444 | None:intergenic | 55.0% |
| ACTAGCACCTTCCAGCCACC+AGG | + | chr1.1:73589218-73589237 | None:intergenic | 60.0% | |
| AGGCCGAGCTAGGCTTTGCA+AGG | - | chr1.1:73586566-73586585 | MS.gene37680:CDS | 60.0% | |
| CAAACCACCGGGCAAGTGGT+TGG | - | chr1.1:73586095-73586114 | MS.gene37680:intron | 60.0% | |
| CAACCACTTGCCCGGTGGTT+TGG | + | chr1.1:73586097-73586116 | None:intergenic | 60.0% | |
| CCGTCTCCCATGCACTATGC+TGG | - | chr1.1:73588629-73588648 | MS.gene37680:intron | 60.0% | |
| CTAGCACCTTCCAGCCACCA+GGG | + | chr1.1:73589217-73589236 | None:intergenic | 60.0% | |
| CTCCGGAACCCTGTCCACAA+TGG | - | chr1.1:73587923-73587942 | MS.gene37680:intron | 60.0% | |
| CTGGACCAACTGAGGTGCAG+TGG | - | chr1.1:73588648-73588667 | MS.gene37680:intron | 60.0% | |
| GCATGCCACTGCACCTCAGT+TGG | + | chr1.1:73588656-73588675 | None:intergenic | 60.0% | |
| GGCCATTGTGGACAGGGTTC+CGG | + | chr1.1:73587928-73587947 | None:intergenic | 60.0% | |
| GGTAGAGACCCTGCAGGCAT+GGG | - | chr1.1:73588716-73588735 | MS.gene37680:intron | 60.0% | |
| TATGTGCCCTGGTGGCTGGA+AGG | - | chr1.1:73589208-73589227 | MS.gene37680:CDS | 60.0% | |
| CGGTAGAGACCCTGCAGGCA+TGG | - | chr1.1:73588715-73588734 | MS.gene37680:intron | 65.0% | |
| GAGCCAAACCACCGGGCAAG+TGG | - | chr1.1:73586091-73586110 | MS.gene37680:intron | 65.0% | |
| GGATGGGAATAGGCCAGGCC+AGG | + | chr1.1:73587211-73587230 | None:intergenic | 65.0% | |
| GTAGGCCTATGACAGGCCGC+AGG | + | chr1.1:73586634-73586653 | None:intergenic | 65.0% | |
| TGTGGACAGGGTTCCGGAGC+TGG | + | chr1.1:73587922-73587941 | None:intergenic | 65.0% | |
| !! | GAAGGGTGGGCTACCCCACT+TGG | - | chr1.1:73585632-73585651 | MS.gene37680:intron | 65.0% |
| ACAGGCCGCAGGCCAGGCTT+AGG | + | chr1.1:73586623-73586642 | None:intergenic | 70.0% | |
| ACGGGATGGCCCATGCCTGC+AGG | + | chr1.1:73588728-73588747 | None:intergenic | 70.0% | |
| CCACCGGGCAAGTGGTTGGG+AGG | - | chr1.1:73586099-73586118 | MS.gene37680:intron | 70.0% | |
| CCTACGGCCTGGCCTACGAC+AGG | + | chr1.1:73587162-73587181 | None:intergenic | 70.0% | |
| CCTATGACAGGCCGCAGGCC+AGG | + | chr1.1:73586629-73586648 | None:intergenic | 70.0% | |
| CCTCCCAACCACTTGCCCGG+TGG | + | chr1.1:73586102-73586121 | None:intergenic | 70.0% | |
| CCTGGCCTGCGGCCTGTCAT+AGG | - | chr1.1:73586626-73586645 | MS.gene37680:CDS | 70.0% | |
| CCTGTCGTAGGCCAGGCCGT+AGG | - | chr1.1:73587159-73587178 | MS.gene37680:intron | 70.0% | |
| CGGGATGGCCCATGCCTGCA+GGG | + | chr1.1:73588727-73588746 | None:intergenic | 70.0% | |
| GGGAATAGGCCAGGCCAGGC+CGG | + | chr1.1:73587207-73587226 | None:intergenic | 70.0% | |
| !! | GGGTGGGCTACCCCACTTGG+TGG | - | chr1.1:73585635-73585654 | MS.gene37680:CDS | 70.0% |
| CAGGCCAGGCCGGCCTACAG+GGG | + | chr1.1:73587197-73587216 | None:intergenic | 75.0% | |
| CAGGCCGTAGGCCAGGCCGT+AGG | - | chr1.1:73587171-73587190 | MS.gene37680:intron | 75.0% | |
| CCAGGCCAGGCCGGCCTACA+GGG | + | chr1.1:73587198-73587217 | None:intergenic | 75.0% | |
| CGTAGGCCAGGCCGTAGGCC+AGG | - | chr1.1:73587164-73587183 | MS.gene37680:intron | 75.0% | |
| CTACGGCCTGGCCTACGGCC+TGG | + | chr1.1:73587173-73587192 | None:intergenic | 75.0% | |
| GCCAGGCCGTAGGCCCCTGT+AGG | - | chr1.1:73587181-73587200 | MS.gene37680:intron | 75.0% | |
| GCCTACAGGGGCCTACGGCC+TGG | + | chr1.1:73587185-73587204 | None:intergenic | 75.0% | |
| GGCCGGCCTACAGGGGCCTA+CGG | + | chr1.1:73587190-73587209 | None:intergenic | 75.0% | |
| GGCCGTAGGCCCCTGTAGGC+CGG | - | chr1.1:73587185-73587204 | MS.gene37680:intron | 75.0% | |
| GGCCTACGACAGGCCAGGCC+AGG | + | chr1.1:73587152-73587171 | None:intergenic | 75.0% | |
| GGCCTGGCCTACGACAGGCC+AGG | + | chr1.1:73587157-73587176 | None:intergenic | 75.0% | |
| GGCCTGGCCTGGCCTGTCGT+AGG | - | chr1.1:73587147-73587166 | MS.gene37680:intron | 75.0% | |
| GGCCTGGCCTGTCGTAGGCC+AGG | - | chr1.1:73587152-73587171 | MS.gene37680:intron | 75.0% | |
| GGGGCCTACGGCCTGGCCTA+CGG | + | chr1.1:73587178-73587197 | None:intergenic | 75.0% | |
| TAGGCCCCTGTAGGCCGGCC+TGG | - | chr1.1:73587190-73587209 | MS.gene37680:intron | 75.0% | |
| ! | CCCTGTAGGCCGGCCTGGCC+TGG | - | chr1.1:73587195-73587214 | MS.gene37680:intron | 80.0% |
| ! | GCCAGGCCAGGCCGGCCTAC+AGG | + | chr1.1:73587199-73587218 | None:intergenic | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.1 | gene | 73585341 | 73589301 | 73585341 | ID=MS.gene37680 |
| chr1.1 | mRNA | 73585341 | 73589301 | 73585341 | ID=MS.gene37680.t1;Parent=MS.gene37680 |
| chr1.1 | exon | 73588796 | 73589301 | 73588796 | ID=MS.gene37680.t1.exon1;Parent=MS.gene37680.t1 |
| chr1.1 | CDS | 73588796 | 73589301 | 73588796 | ID=cds.MS.gene37680.t1;Parent=MS.gene37680.t1 |
| chr1.1 | exon | 73586555 | 73586960 | 73586555 | ID=MS.gene37680.t1.exon2;Parent=MS.gene37680.t1 |
| chr1.1 | CDS | 73586555 | 73586960 | 73586555 | ID=cds.MS.gene37680.t1;Parent=MS.gene37680.t1 |
| chr1.1 | exon | 73585804 | 73586064 | 73585804 | ID=MS.gene37680.t1.exon3;Parent=MS.gene37680.t1 |
| chr1.1 | CDS | 73585804 | 73586064 | 73585804 | ID=cds.MS.gene37680.t1;Parent=MS.gene37680.t1 |
| chr1.1 | exon | 73585633 | 73585719 | 73585633 | ID=MS.gene37680.t1.exon4;Parent=MS.gene37680.t1 |
| chr1.1 | CDS | 73585633 | 73585719 | 73585633 | ID=cds.MS.gene37680.t1;Parent=MS.gene37680.t1 |
| chr1.1 | exon | 73585341 | 73585478 | 73585341 | ID=MS.gene37680.t1.exon5;Parent=MS.gene37680.t1 |
| chr1.1 | CDS | 73585341 | 73585478 | 73585341 | ID=cds.MS.gene37680.t1;Parent=MS.gene37680.t1 |
| Gene Sequence |
| Protein sequence |
