AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene34410

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene34410.t1 MTR_1g102550 98.495 465 7 0 1 465 1 465 0.0 944
MS.gene34410.t1 MTR_6g016335 75.887 423 102 0 38 460 60 482 0.0 681
MS.gene34410.t1 MTR_6g016325 72.449 98 27 0 363 460 30 127 6.32e-46 156
MS.gene34410.t1 MTR_6g016320 95.082 61 3 0 304 364 12 72 1.93e-36 129
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene34410.t1 AT3G22890 81.505 465 84 1 1 465 1 463 0.0 784
MS.gene34410.t1 AT4G14680 78.205 468 96 3 1 465 1 465 0.0 753
MS.gene34410.t1 AT5G43780 77.371 464 103 2 2 463 3 466 0.0 738
MS.gene34410.t1 AT1G19920 76.658 407 95 0 45 451 57 463 0.0 676
MS.gene34410.t1 AT4G14680 77.262 431 92 3 1 428 1 428 0.0 676

Find 157 sgRNAs with CRISPR-Local

Find 259 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCCTAAACATTCTTCCTTTC+AGG 0.110980 1.2:-76328961 MS.gene34410:CDS
CCGCAAGCGGCTTCTTGATA+TGG 0.186607 1.2:-76329804 MS.gene34410:CDS
CGAGCTATCCTTTCTTCTTT+AGG 0.220343 1.2:+76330073 None:intergenic
CTCTGATGGGAGGGGCAAAA+TGG 0.227116 1.2:+76331689 None:intergenic
GTGAGAAGGGAAAGAGGTTT+TGG 0.256344 1.2:+76331735 None:intergenic
CAAGATTTCGTCTTCATATC+AGG 0.277442 1.2:-76328798 MS.gene34410:CDS
CTATAACTAATGCTGGAAAT+TGG 0.315885 1.2:-76330006 MS.gene34410:CDS
ATCCTCTTGCTTCATCCACT+TGG 0.327829 1.2:-76329767 MS.gene34410:CDS
GTGCATGGGAGACGGGAATA+TGG 0.342460 1.2:+76329156 None:intergenic
GTGAATTGAAATGAAGCGTT+TGG 0.352161 1.2:+76331419 None:intergenic
TCCTCTTGCTTCATCCACTT+GGG 0.354000 1.2:-76329766 MS.gene34410:CDS
CACTAGACCGGAACAGGTTC+CGG 0.365121 1.2:+76328487 None:intergenic
TTTCAAAGATTGATGTTGAA+TGG 0.369904 1.2:-76331507 MS.gene34410:CDS
TTCAAGCAATGGCAAAGTTC+CGG 0.370171 1.2:-76328506 MS.gene34410:CDS
ACGAAATCTTGAGGCCTTGA+TGG 0.373728 1.2:+76328810 None:intergenic
GGCCATTGTGGACAGGATTC+CGG 0.375621 1.2:+76329849 None:intergenic
CAAAGTTCCGGAACCTGTTC+CGG 0.376156 1.2:-76328494 MS.gene34410:CDS
AAAATGGGTATCAAACGTTT+TGG 0.377383 1.2:+76331705 None:intergenic
AGCATTAGTTATAGTTTCTT+CGG 0.377760 1.2:+76330015 None:intergenic
GTTATAGTTTCTTCGGCATA+AGG 0.383634 1.2:+76330022 None:intergenic
CATATCAAGAAGCCGCTTGC+GGG 0.394862 1.2:+76329805 None:intergenic
TACTCTTTGAGAATGGCAAC+AGG 0.396818 1.2:+76331274 None:intergenic
CGCAAGCGGCTTCTTGATAT+GGG 0.397191 1.2:-76329803 MS.gene34410:CDS
TTCATCCGGTTTGATTGAAC+CGG 0.402859 1.2:-76331617 MS.gene34410:CDS
TGAACCGGATGGTGGAAAAT+TGG 0.405429 1.2:-76331602 MS.gene34410:CDS
CCTAAACATTCTTCCTTTCA+GGG 0.410178 1.2:-76328960 MS.gene34410:intron
GATTTATGTGCCCTGGTGGC+TGG 0.411095 1.2:-76328564 MS.gene34410:CDS
CTGTGTTTGCGTTCCAGCTC+CGG 0.416559 1.2:-76329868 MS.gene34410:CDS
CGGTCGAGACCCTGCAGGCA+TGG 0.417387 1.2:-76329062 MS.gene34410:CDS
AAGAAAGGATAGCTCGGACT+TGG 0.417849 1.2:-76330066 MS.gene34410:CDS
TTCAAAGATTGATGTTGAAT+GGG 0.419355 1.2:-76331506 MS.gene34410:CDS
ATCAGAGTCAACGTAGCAAT+TGG 0.420035 1.2:-76331673 MS.gene34410:CDS
AGAAAGGATAGCTCGGACTT+GGG 0.421513 1.2:-76330065 MS.gene34410:CDS
CTGATGATGTCCCTCTTGAT+TGG 0.423972 1.2:-76329730 MS.gene34410:CDS
ACAGGATGGCCCATGCCTGC+AGG 0.424384 1.2:+76329052 None:intergenic
AATGCTGGAAATTGGTTGAT+TGG 0.426694 1.2:-76329998 MS.gene34410:CDS
GAGAGAGTGAGAAGGGAAAG+AGG 0.428871 1.2:+76331729 None:intergenic
AAGCCCATCATGATACTTGA+TGG 0.430211 1.2:+76329952 None:intergenic
TCGGAGTTTCTGATTGGCTC+TGG 0.430468 1.2:+76331642 None:intergenic
TCTGATGGGAGGGGCAAAAT+GGG 0.437230 1.2:+76331690 None:intergenic
ATACAACACTAGACCGGAAC+AGG 0.442459 1.2:+76328481 None:intergenic
TATGTCTGTTCCGATTGTTT+TGG 0.445173 1.2:-76331368 MS.gene34410:CDS
TGTGGACAGGATTCCGGAGC+TGG 0.447826 1.2:+76329855 None:intergenic
CAGAAACTCCGAGTTTCATC+CGG 0.449061 1.2:-76331631 MS.gene34410:CDS
ATCTTTGAAAGCTTTATCCT+TGG 0.450558 1.2:+76331520 None:intergenic
GATCTTTCTTTAGGTACTTG+AGG 0.454226 1.2:-76329212 MS.gene34410:intron
GGTATCTTACTCTTTGAGAA+TGG 0.454494 1.2:+76331267 None:intergenic
CACACCTTCAATGGCTTCCA+TGG 0.454764 1.2:-76331770 None:intergenic
GGTCGAGACCCTGCAGGCAT+GGG 0.458137 1.2:-76329061 MS.gene34410:CDS
CCCTGAAAGGAAGAATGTTT+AGG 0.461067 1.2:+76328960 None:intergenic
CAATACTTTCTTTCCGTGGT+CGG 0.462303 1.2:+76329006 None:intergenic
CCTGATGGATTTATGTGCCC+TGG 0.467387 1.2:-76328571 MS.gene34410:CDS
AAGAGGGACATCATCAGCTT+TGG 0.467660 1.2:+76329736 None:intergenic
TTTCTTTAGGTACTTGAGGA+TGG 0.469913 1.2:-76329208 MS.gene34410:intron
ACCATCCGGTTCAATCAAAC+CGG 0.472422 1.2:+76331612 None:intergenic
ATGGACACAACTGTTGTCTC+TGG 0.474500 1.2:+76329175 None:intergenic
GAAGAAACTATAACTAATGC+TGG 0.479156 1.2:-76330013 MS.gene34410:CDS
CCGTCTCCCATGCACTATGC+TGG 0.482401 1.2:-76329148 MS.gene34410:CDS
GGGGCAAACTTCTACATTGT+CGG 0.482523 1.2:-76329082 MS.gene34410:CDS
TGAAACTCGGAGTTTCTGAT+TGG 0.483260 1.2:+76331636 None:intergenic
AATTCACTTAGACTCAATGA+TGG 0.483643 1.2:-76331403 MS.gene34410:CDS
ATGTTTAGGCGCTCGAGTCC+AGG 0.484149 1.2:+76328974 None:intergenic
GCATGCCACTGCACCTCAGT+TGG 0.486147 1.2:+76329124 None:intergenic
AGTTTAGTGCTTTCAAGCAA+TGG 0.487220 1.2:-76328517 MS.gene34410:CDS
GGGTGGGCTACCCCACTTGG+TGG 0.489758 1.2:-76331466 MS.gene34410:CDS
TCTTCGGCATAAGGCAGGCC+GGG 0.491192 1.2:+76330031 None:intergenic
AATTGCTACGTTGACTCTGA+TGG 0.492558 1.2:+76331675 None:intergenic
GCAAAGGCTAGGATCAATGC+TGG 0.493443 1.2:-76329103 MS.gene34410:CDS
GAAGGGTGGGCTACCCCACT+TGG 0.502913 1.2:-76331469 MS.gene34410:CDS
TTCTTCGGCATAAGGCAGGC+CGG 0.503309 1.2:+76330030 None:intergenic
CCTCTTGCTTCATCCACTTG+GGG 0.504239 1.2:-76329765 MS.gene34410:CDS
TAGTTTCTTCGGCATAAGGC+AGG 0.506724 1.2:+76330026 None:intergenic
AAGAAGCCGCTTGCGGGTAT+CGG 0.507237 1.2:+76329811 None:intergenic
CAGCATAGTGCATGGGAGAC+GGG 0.510140 1.2:+76329149 None:intergenic
AACTCATCACGGAGTTCTGA+AGG 0.511645 1.2:+76329911 None:intergenic
TGCTCAATACTTTCTTTCCG+TGG 0.512487 1.2:+76329002 None:intergenic
TTCATGTGCTGAGTGAAGGG+TGG 0.514044 1.2:-76331483 MS.gene34410:CDS
TCATCAATAGCCAAAACAAT+CGG 0.518346 1.2:+76331358 None:intergenic
CCAGGGCACATAAATCCATC+AGG 0.520870 1.2:+76328571 None:intergenic
TGGCATTCTTTGATCCATCA+AGG 0.522843 1.2:-76328824 MS.gene34410:CDS
CAGGATGGCCCATGCCTGCA+GGG 0.525821 1.2:+76329053 None:intergenic
TCATGTGCTGAGTGAAGGGT+GGG 0.527216 1.2:-76331482 MS.gene34410:CDS
AATTGAAATGAAGCGTTTGG+AGG 0.528583 1.2:+76331422 None:intergenic
CAAAGGCTAGGATCAATGCT+GGG 0.528599 1.2:-76329102 MS.gene34410:CDS
ATAAGCATCCTAAAGAAGAA+AGG 0.528895 1.2:-76330081 MS.gene34410:CDS
ACTAGCACCTTCCAGCCACC+AGG 0.530061 1.2:+76328553 None:intergenic
TGCTGCTTATGACAAGACTC+AGG 0.532676 1.2:-76328853 MS.gene34410:CDS
GAACCCATCAAGTATCATGA+TGG 0.533542 1.2:-76329956 MS.gene34410:CDS
AAAGCATGGCCATTGTGGAC+AGG 0.534971 1.2:+76329842 None:intergenic
CCAGCATAGTGCATGGGAGA+CGG 0.537239 1.2:+76329148 None:intergenic
TGACAAGACTCAGGGTAAGA+TGG 0.539176 1.2:-76328844 MS.gene34410:CDS
AGTTCATCAATTACCCTGAA+AGG 0.541572 1.2:+76328947 None:intergenic
TGATGGGTTCTATAACCTCT+AGG 0.543315 1.2:+76329969 None:intergenic
CAATCAAACCGGATGAAACT+CGG 0.546468 1.2:+76331623 None:intergenic
CTAAAGAAGAAAGGATAGCT+CGG 0.547383 1.2:-76330072 MS.gene34410:CDS
AACAAAGAAAGTCCTCCTGA+TGG 0.550290 1.2:-76328586 MS.gene34410:CDS
AAAGTATTGAGCATGGCACC+TGG 0.552120 1.2:-76328992 MS.gene34410:CDS
TTTGGACAAAAGGGTAGCCA+TGG 0.552527 1.2:+76331753 None:intergenic
TATGTGCCCTGGTGGCTGGA+AGG 0.556507 1.2:-76328560 MS.gene34410:CDS
CTACGTTGACTCTGATGGGA+GGG 0.561987 1.2:+76331680 None:intergenic
ATTGTCGGTCGAGACCCTGC+AGG 0.563143 1.2:-76329067 MS.gene34410:CDS
GAAAGGATAGCTCGGACTTG+GGG 0.563416 1.2:-76330064 MS.gene34410:CDS
ACTTGGGGAACAACTGCTCC+CGG 0.563450 1.2:-76330049 MS.gene34410:CDS
TCCGGTTTGATTGAACCGGA+TGG 0.563694 1.2:-76331613 MS.gene34410:CDS
GAGAATGAAACAACATGAGA+AGG 0.566866 1.2:-76329708 MS.gene34410:intron
ATTGCTACGTTGACTCTGAT+GGG 0.567247 1.2:+76331676 None:intergenic
CTCTCATGAAACCACCAAGT+GGG 0.567308 1.2:+76331455 None:intergenic
GTGAAGCTTTATCATTGCCA+AGG 0.567965 1.2:-76331537 MS.gene34410:CDS
CTCTTGCTTCATCCACTTGG+GGG 0.575679 1.2:-76329764 MS.gene34410:CDS
TACGTTGACTCTGATGGGAG+GGG 0.576534 1.2:+76331681 None:intergenic
TGGGTTCATGTGCTGAGTGA+AGG 0.577966 1.2:-76331487 MS.gene34410:CDS
ATTAAAATACAACACTAGAC+CGG 0.582109 1.2:+76328475 None:intergenic
TGCAGATGCGAACACTTGCT+AGG 0.583416 1.2:-76328609 MS.gene34410:intron
AACCCATCAAGTATCATGAT+GGG 0.586308 1.2:-76329955 MS.gene34410:CDS
GTTGGTCCAGCATAGTGCAT+GGG 0.590516 1.2:+76329142 None:intergenic
ATTCACTTAGACTCAATGAT+GGG 0.594320 1.2:-76331402 MS.gene34410:CDS
GGTTTGATTGAACCGGATGG+TGG 0.596506 1.2:-76331610 MS.gene34410:CDS
AGCCCATCATGATACTTGAT+GGG 0.597356 1.2:+76329953 None:intergenic
GGGTTCATGTGCTGAGTGAA+GGG 0.599411 1.2:-76331486 MS.gene34410:CDS
GCTGGAAATTGGTTGATTGG+TGG 0.600582 1.2:-76329995 MS.gene34410:CDS
AGTTGGTCCAGCATAGTGCA+TGG 0.601513 1.2:+76329141 None:intergenic
CCATATCAAGAAGCCGCTTG+CGG 0.602478 1.2:+76329804 None:intergenic
GTTTCATTCTCCAATCAAGA+GGG 0.604184 1.2:+76329720 None:intergenic
TGCAGTGGCATGCAAAGGCT+AGG 0.605138 1.2:-76329114 MS.gene34410:CDS
TGTTTCATTCTCCAATCAAG+AGG 0.605490 1.2:+76329719 None:intergenic
TGAGGTGCAGTGGCATGCAA+AGG 0.611774 1.2:-76329119 MS.gene34410:CDS
TTAGCAAAGCATGGCCATTG+TGG 0.614348 1.2:+76329837 None:intergenic
AGTGGATGAAGCAAGAGGAT+CGG 0.620500 1.2:+76329770 None:intergenic
CTGGAACGCAAACACAGCAT+CGG 0.624640 1.2:+76329874 None:intergenic
CGTCTTCATATCAGGCACAA+AGG 0.625919 1.2:-76328790 MS.gene34410:intron
TATCGGTCATTAGCAAAGCA+TGG 0.627110 1.2:+76329828 None:intergenic
TGGAAAATTGGTAGAGCTTG+TGG 0.628005 1.2:-76331590 MS.gene34410:CDS
ACTCATCACGGAGTTCTGAA+GGG 0.630273 1.2:+76329912 None:intergenic
AACTCCGTGATGAGTTCACA+AGG 0.634078 1.2:-76329904 MS.gene34410:CDS
CTCATCACGGAGTTCTGAAG+GGG 0.634921 1.2:+76329913 None:intergenic
TGCGCCTTGTGAACTCATCA+CGG 0.635019 1.2:+76329900 None:intergenic
GATGGATTTATGTGCCCTGG+TGG 0.643053 1.2:-76328568 MS.gene34410:CDS
ACTCTTTGAGAATGGCAACA+GGG 0.643983 1.2:+76331275 None:intergenic
CTCCGGAATCCTGTCCACAA+TGG 0.646104 1.2:-76329851 MS.gene34410:CDS
TCTCATGAAACCACCAAGTG+GGG 0.649285 1.2:+76331456 None:intergenic
CGGAAAGAAAGTATTGAGCA+TGG 0.652115 1.2:-76328999 MS.gene34410:CDS
CTGGACCAACTGAGGTGCAG+TGG 0.655057 1.2:-76329129 MS.gene34410:CDS
TCTCTCATGAAACCACCAAG+TGG 0.655442 1.2:+76331454 None:intergenic
CCCCAAGTGGATGAAGCAAG+AGG 0.656771 1.2:+76329765 None:intergenic
TTGATGATGATCAGAAACAT+CGG 0.659323 1.2:-76331342 MS.gene34410:CDS
CTAGCACCTTCCAGCCACCA+GGG 0.661333 1.2:+76328554 None:intergenic
GATGATCAGAAACATCGGAT+CGG 0.661345 1.2:-76331337 MS.gene34410:CDS
TAATGACCGATACCCGCAAG+CGG 0.664200 1.2:-76329817 MS.gene34410:CDS
GCTGCTTATGACAAGACTCA+GGG 0.667419 1.2:-76328852 MS.gene34410:CDS
GCTACGTTGACTCTGATGGG+AGG 0.667478 1.2:+76331679 None:intergenic
GATCTGTATGATGCCGACCA+CGG 0.670228 1.2:-76329019 MS.gene34410:CDS
GATATGAAGACGAAATCTTG+AGG 0.673263 1.2:+76328801 None:intergenic
GTTGATTGGTGGTGACCTAG+AGG 0.677209 1.2:-76329984 MS.gene34410:CDS
AAAGGCTAGGATCAATGCTG+GGG 0.690474 1.2:-76329101 MS.gene34410:CDS
AAAATTGGTAGAGCTTGTGG+TGG 0.695154 1.2:-76331587 MS.gene34410:CDS
GCACTATGCTGGACCAACTG+AGG 0.705349 1.2:-76329137 MS.gene34410:CDS
GGGCACATAAATCCATCAGG+AGG 0.714670 1.2:+76328574 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAAAAATAAAATAAAAAAGG+AGG + chr1.2:76329585-76329604 None:intergenic 10.0%
!!! AATTTATTTTTGTATTTGTT+TGG + chr1.2:76329780-76329799 None:intergenic 10.0%
!! AATGAAAAAGAATTAAAACA+AGG + chr1.2:76329470-76329489 None:intergenic 15.0%
!! ATCTTAATCTTAATTAACAA+AGG - chr1.2:76331605-76331624 MS.gene34410:CDS 15.0%
!! ACAAAAAGAAAAGAAAAAAG+TGG + chr1.2:76330617-76330636 None:intergenic 20.0%
!! AGATGAAAAATATTAGTCAT+AGG + chr1.2:76330126-76330145 None:intergenic 20.0%
!! AGATTAAGATACAACATAAA+TGG + chr1.2:76331595-76331614 None:intergenic 20.0%
!! CAAAAACATGAAATTTACAT+AGG + chr1.2:76329109-76329128 None:intergenic 20.0%
!! CTCTCATAAAAAAACAAAAA+TGG + chr1.2:76329304-76329323 None:intergenic 20.0%
!! TAGACAAAATACAATATTCA+TGG + chr1.2:76329971-76329990 None:intergenic 20.0%
!! TTTAATTGGTCAATTATTGT+AGG - chr1.2:76329398-76329417 MS.gene34410:intron 20.0%
!!! AATTCTTTTTCATTTTGTGT+TGG - chr1.2:76329476-76329495 MS.gene34410:intron 20.0%
!!! GGAGTAACAATATTTTTATT+GGG + chr1.2:76329196-76329215 None:intergenic 20.0%
!!! TATGACTAATATTTTTCATC+TGG - chr1.2:76330125-76330144 MS.gene34410:intron 20.0%
! AAACTATCTCAAAATCATCA+CGG + chr1.2:76329542-76329561 None:intergenic 25.0%
! AGCATATCATAAAACAATAG+TGG + chr1.2:76330752-76330771 None:intergenic 25.0%
! AGCATTAGTTATAGTTTCTT+CGG + chr1.2:76330237-76330256 None:intergenic 25.0%
! GATTATTTCCATTCATTTGT+AGG - chr1.2:76331372-76331391 MS.gene34410:CDS 25.0%
! TAAATTTCCCAGTTGAAATA+AGG + chr1.2:76329821-76329840 None:intergenic 25.0%
! TAATCAGTGTTCTTAAATAG+CGG - chr1.2:76330674-76330693 MS.gene34410:intron 25.0%
! TATTAGTCATAGGAAACAAA+TGG + chr1.2:76330116-76330135 None:intergenic 25.0%
! TCAAAGAGAGATTTGAAAAA+AGG - chr1.2:76328690-76328709 MS.gene34410:intron 25.0%
! TTCAAAGATTGATGTTGAAT+GGG - chr1.2:76328743-76328762 MS.gene34410:intron 25.0%
! TTCTCACTAATAACTATATG+AGG - chr1.2:76331329-76331348 MS.gene34410:CDS 25.0%
! TTTCAAAGATTGATGTTGAA+TGG - chr1.2:76328742-76328761 MS.gene34410:intron 25.0%
!! AGTATTGTTTTCAATATGCA+GGG - chr1.2:76329346-76329365 MS.gene34410:intron 25.0%
!! ATTTAAGAACACTGATTAGA+AGG + chr1.2:76330672-76330691 None:intergenic 25.0%
!! GTATCTTTTGATCTTTCTTT+AGG - chr1.2:76331028-76331047 MS.gene34410:intron 25.0%
!! TAGTATTGTTTTCAATATGC+AGG - chr1.2:76329345-76329364 MS.gene34410:intron 25.0%
!! TATGTTTTCTTGTTGCAAAT+AGG - chr1.2:76329921-76329940 MS.gene34410:CDS 25.0%
!! TTTAAGAACACTGATTAGAA+GGG + chr1.2:76330671-76330690 None:intergenic 25.0%
!!! GGGAGTAACAATATTTTTAT+TGG + chr1.2:76329197-76329216 None:intergenic 25.0%
!!! GTAAATTTCATGTTTTTGTG+AGG - chr1.2:76329111-76329130 MS.gene34410:CDS 25.0%
!!! GTATGTTTGTTATGTGATTT+TGG - chr1.2:76331481-76331500 MS.gene34410:CDS 25.0%
!!! TTGTTTTTTGTCTGTTCTTA+GGG - chr1.2:76329136-76329155 MS.gene34410:CDS 25.0%
!!! TTTGTTTTTTGTCTGTTCTT+AGG - chr1.2:76329135-76329154 MS.gene34410:CDS 25.0%
AAAAAGCAACTTGAACCATA+TGG + chr1.2:76330982-76331001 None:intergenic 30.0%
AAAAGCAACTTGAACCATAT+GGG + chr1.2:76330981-76331000 None:intergenic 30.0%
AATTCACTTAGACTCAATGA+TGG - chr1.2:76328846-76328865 MS.gene34410:CDS 30.0%
ACAAAACCTCTAGATACATA+GGG - chr1.2:76329747-76329766 MS.gene34410:CDS 30.0%
ACAAGGAAACAAAACATGTA+CGG + chr1.2:76329453-76329472 None:intergenic 30.0%
ACATGAACAAGAGAAGAAAA+AGG + chr1.2:76329006-76329025 None:intergenic 30.0%
AGCATTGTGAAATAGACTAT+AGG - chr1.2:76329711-76329730 MS.gene34410:CDS 30.0%
AGCCAATCATAGAGTTTAAT+TGG - chr1.2:76329384-76329403 MS.gene34410:intron 30.0%
ATAAGCATCCTAAAGAAGAA+AGG - chr1.2:76330168-76330187 MS.gene34410:intron 30.0%
ATCCAGCTCACAAAAAATAA+CGG + chr1.2:76330840-76330859 None:intergenic 30.0%
ATTCACTTAGACTCAATGAT+GGG - chr1.2:76328847-76328866 MS.gene34410:CDS 30.0%
ATTCATGGCATGATTATGTA+TGG + chr1.2:76329956-76329975 None:intergenic 30.0%
CATGTTCTATTTACCAATGT+TGG - chr1.2:76329643-76329662 MS.gene34410:intron 30.0%
CTATAACTAATGCTGGAAAT+TGG - chr1.2:76330243-76330262 MS.gene34410:intron 30.0%
CTTAATCAACTACAGTTTCT+TGG + chr1.2:76330916-76330935 None:intergenic 30.0%
GAAGAAACTATAACTAATGC+TGG - chr1.2:76330236-76330255 MS.gene34410:intron 30.0%
GACCAATTAAACTCTATGAT+TGG + chr1.2:76329389-76329408 None:intergenic 30.0%
GGAATATAATCTGGTAATCT+AGG - chr1.2:76329160-76329179 MS.gene34410:CDS 30.0%
TAACTATATGAGGTTCACAT+AGG - chr1.2:76331339-76331358 MS.gene34410:CDS 30.0%
TCAACACAATCAACTAGAAA+CGG + chr1.2:76330000-76330019 None:intergenic 30.0%
TCATCAATAGCCAAAACAAT+CGG + chr1.2:76328894-76328913 None:intergenic 30.0%
TGTTGAGGATTAATCAAGTT+GGG + chr1.2:76329217-76329236 None:intergenic 30.0%
TTGTGTTGGAATGTTATGAT+TGG - chr1.2:76329490-76329509 MS.gene34410:intron 30.0%
TTGTTGAGGATTAATCAAGT+TGG + chr1.2:76329218-76329237 None:intergenic 30.0%
TTTCACAATGCTTTATAACG+AGG + chr1.2:76329703-76329722 None:intergenic 30.0%
TTTCTTGGTCAACTATAGTT+TGG + chr1.2:76330901-76330920 None:intergenic 30.0%
! AAAATGGGTATCAAACGTTT+TGG + chr1.2:76328547-76328566 None:intergenic 30.0%
! ATCTTTGAAAGCTTTATCCT+TGG + chr1.2:76328732-76328751 None:intergenic 30.0%
! TCATCTTCCTTATTTCAACT+GGG - chr1.2:76329811-76329830 MS.gene34410:CDS 30.0%
! TTCATCTTCCTTATTTCAAC+TGG - chr1.2:76329810-76329829 MS.gene34410:CDS 30.0%
!! AGTTGCTCTTTTTGATTCTA+AGG - chr1.2:76328947-76328966 MS.gene34410:intron 30.0%
!! GTTGCTCTTTTTGATTCTAA+GGG - chr1.2:76328948-76328967 MS.gene34410:intron 30.0%
!! TATGTATCTAGAGGTTTTGT+GGG + chr1.2:76329747-76329766 None:intergenic 30.0%
!! TTGATGATGATCAGAAACAT+CGG - chr1.2:76328907-76328926 MS.gene34410:intron 30.0%
!!! TACAGATCTCTTTTTTCAAC+AGG + chr1.2:76331218-76331237 None:intergenic 30.0%
!!! TATGGTTCAAGTTGCTTTTT+TGG - chr1.2:76330982-76331001 MS.gene34410:intron 30.0%
!!! TGTTTTTTGTCTGTTCTTAG+GGG - chr1.2:76329137-76329156 MS.gene34410:CDS 30.0%
AAAGCAACTTGAACCATATG+GGG + chr1.2:76330980-76330999 None:intergenic 35.0%
AACCCATCAAGTATCATGAT+GGG - chr1.2:76330294-76330313 MS.gene34410:intron 35.0%
AATGCTGGAAATTGGTTGAT+TGG - chr1.2:76330251-76330270 MS.gene34410:intron 35.0%
AGTTCATCAATTACCCTGAA+AGG + chr1.2:76331305-76331324 None:intergenic 35.0%
AGTTTAGTGCTTTCAAGCAA+TGG - chr1.2:76331732-76331751 MS.gene34410:CDS 35.0%
ATCATCAGAACAACCAACAT+TGG + chr1.2:76329659-76329678 None:intergenic 35.0%
CAAGATTTCGTCTTCATATC+AGG - chr1.2:76331451-76331470 MS.gene34410:CDS 35.0%
CACAAAACCTCTAGATACAT+AGG - chr1.2:76329746-76329765 MS.gene34410:CDS 35.0%
CCTAAACATTCTTCCTTTCA+GGG - chr1.2:76331289-76331308 MS.gene34410:CDS 35.0%
CTAAAGAAGAAAGGATAGCT+CGG - chr1.2:76330177-76330196 MS.gene34410:intron 35.0%
CTGCTATGCTATAGCATTAT+GGG + chr1.2:76330717-76330736 None:intergenic 35.0%
GAGAATGAAACAACATGAGA+AGG - chr1.2:76330541-76330560 MS.gene34410:intron 35.0%
GATATGAAGACGAAATCTTG+AGG + chr1.2:76331451-76331470 None:intergenic 35.0%
GATCTTTCTTTAGGTACTTG+AGG - chr1.2:76331037-76331056 MS.gene34410:intron 35.0%
GTTATAGTTTCTTCGGCATA+AGG + chr1.2:76330230-76330249 None:intergenic 35.0%
GTTCTTAAATAGCGGCTAAT+CGG - chr1.2:76330682-76330701 MS.gene34410:intron 35.0%
GTTGGAATGTTATGATTGGT+TGG - chr1.2:76329494-76329513 MS.gene34410:intron 35.0%
GTTTCATTCTCCAATCAAGA+GGG + chr1.2:76330532-76330551 None:intergenic 35.0%
TCCAGCTCACAAAAAATAAC+GGG + chr1.2:76330839-76330858 None:intergenic 35.0%
TCTGCTATGCTATAGCATTA+TGG + chr1.2:76330718-76330737 None:intergenic 35.0%
TGTTTCATTCTCCAATCAAG+AGG + chr1.2:76330533-76330552 None:intergenic 35.0%
TTTCTTTAGGTACTTGAGGA+TGG - chr1.2:76331041-76331060 MS.gene34410:intron 35.0%
! AATTGAAATGAAGCGTTTGG+AGG + chr1.2:76328830-76328849 None:intergenic 35.0%
! ACTCTATGATTGGCTAAAGA+AGG + chr1.2:76329379-76329398 None:intergenic 35.0%
! ATGTTGGTTGTTCTGATGAT+TGG - chr1.2:76329659-76329678 MS.gene34410:intron 35.0%
! CTATGTATCTAGAGGTTTTG+TGG + chr1.2:76329748-76329767 None:intergenic 35.0%
! GGTATCTTACTCTTTGAGAA+TGG + chr1.2:76328985-76329004 None:intergenic 35.0%
! GTGAATTGAAATGAAGCGTT+TGG + chr1.2:76328833-76328852 None:intergenic 35.0%
! TATGTCTGTTCCGATTGTTT+TGG - chr1.2:76328881-76328900 MS.gene34410:intron 35.0%
!! CTCTAACTGATTTTTGTGGT+AGG + chr1.2:76330954-76330973 None:intergenic 35.0%
!! TTTGGTGTTTGTGTCTATGT+CGG + chr1.2:76331539-76331558 None:intergenic 35.0%
!!! GAAAGAGGTTTTGGACAAAA+GGG + chr1.2:76328508-76328527 None:intergenic 35.0%
!!! GATCTCTTTTTTCAACAGGA+TGG + chr1.2:76331214-76331233 None:intergenic 35.0%
!!! GTTATTTTTTGTGAGCTGGA+TGG - chr1.2:76330839-76330858 MS.gene34410:intron 35.0%
!!! GTTCAAGTTGCTTTTTTGGA+TGG - chr1.2:76330986-76331005 MS.gene34410:intron 35.0%
!!! GTTTTTTGTCTGTTCTTAGG+GGG - chr1.2:76329138-76329157 MS.gene34410:CDS 35.0%
!!! TTTTTTGTCTGTTCTTAGGG+GGG - chr1.2:76329139-76329158 MS.gene34410:CDS 35.0%
AAAATTGGTAGAGCTTGTGG+TGG - chr1.2:76328662-76328681 MS.gene34410:intron 40.0%
AACAAAGAAAGTCCTCCTGA+TGG - chr1.2:76331663-76331682 MS.gene34410:CDS 40.0%
AAGCCCATCATGATACTTGA+TGG + chr1.2:76330300-76330319 None:intergenic 40.0%
AGCAGCAACCTACAAATGAA+TGG + chr1.2:76331383-76331402 None:intergenic 40.0%
AGCCCATCATGATACTTGAT+GGG + chr1.2:76330299-76330318 None:intergenic 40.0%
ATCAGAGTCAACGTAGCAAT+TGG - chr1.2:76328576-76328595 MS.gene34410:CDS 40.0%
CAAAGACCCTATGTATCTAG+AGG + chr1.2:76329756-76329775 None:intergenic 40.0%
CAATACTTTCTTTCCGTGGT+CGG + chr1.2:76331246-76331265 None:intergenic 40.0%
CAATCAAACCGGATGAAACT+CGG + chr1.2:76328629-76328648 None:intergenic 40.0%
CCCTGAAAGGAAGAATGTTT+AGG + chr1.2:76331292-76331311 None:intergenic 40.0%
CGAGCTATCCTTTCTTCTTT+AGG + chr1.2:76330179-76330198 None:intergenic 40.0%
GAACCCATCAAGTATCATGA+TGG - chr1.2:76330293-76330312 MS.gene34410:intron 40.0%
GAGGCAAACAATGACAATAG+AGG + chr1.2:76329566-76329585 None:intergenic 40.0%
GATGATCAGAAACATCGGAT+CGG - chr1.2:76328912-76328931 MS.gene34410:intron 40.0%
GCCTAAACATTCTTCCTTTC+AGG - chr1.2:76331288-76331307 MS.gene34410:CDS 40.0%
GGTTGTTCTGATGATTGGTA+AGG - chr1.2:76329664-76329683 MS.gene34410:intron 40.0%
TATCGGTCATTAGCAAAGCA+TGG + chr1.2:76330424-76330443 None:intergenic 40.0%
TCTTAGGGGGGAATATAATC+TGG - chr1.2:76329151-76329170 MS.gene34410:CDS 40.0%
TGAAACTCGGAGTTTCTGAT+TGG + chr1.2:76328616-76328635 None:intergenic 40.0%
TGCTCAATACTTTCTTTCCG+TGG + chr1.2:76331250-76331269 None:intergenic 40.0%
TGGAAAATTGGTAGAGCTTG+TGG - chr1.2:76328659-76328678 MS.gene34410:intron 40.0%
TGGCATTCTTTGATCCATCA+AGG - chr1.2:76331425-76331444 MS.gene34410:CDS 40.0%
TTCAAGCAATGGCAAAGTTC+CGG - chr1.2:76331743-76331762 MS.gene34410:CDS 40.0%
! ACTCTTTGAGAATGGCAACA+GGG + chr1.2:76328977-76328996 None:intergenic 40.0%
! GTGAAGCTTTATCATTGCCA+AGG - chr1.2:76328712-76328731 MS.gene34410:intron 40.0%
! TACTCTTTGAGAATGGCAAC+AGG + chr1.2:76328978-76328997 None:intergenic 40.0%
! TCTACCAATTTTCCACCATC+CGG + chr1.2:76328654-76328673 None:intergenic 40.0%
! TTCATCCGGTTTGATTGAAC+CGG - chr1.2:76328632-76328651 MS.gene34410:intron 40.0%
!! AATTGCTACGTTGACTCTGA+TGG + chr1.2:76328577-76328596 None:intergenic 40.0%
!! ATTGCTACGTTGACTCTGAT+GGG + chr1.2:76328576-76328595 None:intergenic 40.0%
!! CGGAAAGAAAGTATTGAGCA+TGG - chr1.2:76331250-76331269 MS.gene34410:intron 40.0%
!! GCAGCTCTAACTGATTTTTG+TGG + chr1.2:76330958-76330977 None:intergenic 40.0%
!! TGATGGGTTCTATAACCTCT+AGG + chr1.2:76330283-76330302 None:intergenic 40.0%
!! TTTTGGAGAGAGAGTGAGAA+GGG + chr1.2:76328530-76328549 None:intergenic 40.0%
!!! ACCCGTTATTTTTTGTGAGC+TGG - chr1.2:76330835-76330854 MS.gene34410:intron 40.0%
!!! GGAAAGAGGTTTTGGACAAA+AGG + chr1.2:76328509-76328528 None:intergenic 40.0%
AAAGGCTAGGATCAATGCTG+GGG - chr1.2:76331148-76331167 MS.gene34410:intron 45.0%
AACTCCGTGATGAGTTCACA+AGG - chr1.2:76330345-76330364 MS.gene34410:intron 45.0%
AAGAAAGGATAGCTCGGACT+TGG - chr1.2:76330183-76330202 MS.gene34410:intron 45.0%
AAGAGGGACATCATCAGCTT+TGG + chr1.2:76330516-76330535 None:intergenic 45.0%
ACCATCCGGTTCAATCAAAC+CGG + chr1.2:76328640-76328659 None:intergenic 45.0%
ACGAAATCTTGAGGCCTTGA+TGG + chr1.2:76331442-76331461 None:intergenic 45.0%
AGAAAGGATAGCTCGGACTT+GGG - chr1.2:76330184-76330203 MS.gene34410:intron 45.0%
AGAAGGGAAACGTGCATATG+TGG + chr1.2:76330655-76330674 None:intergenic 45.0%
AGTGGATGAAGCAAGAGGAT+CGG + chr1.2:76330482-76330501 None:intergenic 45.0%
ATCCTCTTGCTTCATCCACT+TGG - chr1.2:76330482-76330501 MS.gene34410:intron 45.0%
ATGGACACAACTGTTGTCTC+TGG + chr1.2:76331077-76331096 None:intergenic 45.0%
CAAAGGCTAGGATCAATGCT+GGG - chr1.2:76331147-76331166 MS.gene34410:intron 45.0%
CAGAAACTCCGAGTTTCATC+CGG - chr1.2:76328618-76328637 MS.gene34410:intron 45.0%
CGTCTTCATATCAGGCACAA+AGG - chr1.2:76331459-76331478 MS.gene34410:CDS 45.0%
CTCTCATGAAACCACCAAGT+GGG + chr1.2:76328797-76328816 None:intergenic 45.0%
GCTGCTTATGACAAGACTCA+GGG - chr1.2:76331397-76331416 MS.gene34410:CDS 45.0%
GCTGGAAATTGGTTGATTGG+TGG - chr1.2:76330254-76330273 MS.gene34410:intron 45.0%
GGGGCAAACTTCTACATTGT+CGG - chr1.2:76331167-76331186 MS.gene34410:intron 45.0%
GTCAGCATCAGTGTCATGTT+TGG + chr1.2:76331557-76331576 None:intergenic 45.0%
TAGTTTCTTCGGCATAAGGC+AGG + chr1.2:76330226-76330245 None:intergenic 45.0%
TCCTCTTGCTTCATCCACTT+GGG - chr1.2:76330483-76330502 MS.gene34410:intron 45.0%
TCTCATGAAACCACCAAGTG+GGG + chr1.2:76328796-76328815 None:intergenic 45.0%
TCTCTCATGAAACCACCAAG+TGG + chr1.2:76328798-76328817 None:intergenic 45.0%
TGACAAGACTCAGGGTAAGA+TGG - chr1.2:76331405-76331424 MS.gene34410:CDS 45.0%
TTAGCAAAGCATGGCCATTG+TGG + chr1.2:76330415-76330434 None:intergenic 45.0%
TTTGGACAAAAGGGTAGCCA+TGG + chr1.2:76328499-76328518 None:intergenic 45.0%
! AACAAGTTGAGCCAAACCAC+CGG - chr1.2:76329233-76329252 MS.gene34410:intron 45.0%
! AACTCATCACGGAGTTCTGA+AGG + chr1.2:76330341-76330360 None:intergenic 45.0%
! CTGATGATGTCCCTCTTGAT+TGG - chr1.2:76330519-76330538 MS.gene34410:intron 45.0%
! GTGAGAAGGGAAAGAGGTTT+TGG + chr1.2:76328517-76328536 None:intergenic 45.0%
! TGCTGCTTATGACAAGACTC+AGG - chr1.2:76331396-76331415 MS.gene34410:CDS 45.0%
!! AAAGTATTGAGCATGGCACC+TGG - chr1.2:76331257-76331276 MS.gene34410:intron 45.0%
!! ACTCATCACGGAGTTCTGAA+GGG + chr1.2:76330340-76330359 None:intergenic 45.0%
!! TGAACCGGATGGTGGAAAAT+TGG - chr1.2:76328647-76328666 MS.gene34410:intron 45.0%
!! TGGTTTGGCTCAACTTGTTG+AGG + chr1.2:76329232-76329251 None:intergenic 45.0%
!!! GTTTTGGAGAGAGAGTGAGA+AGG + chr1.2:76328531-76328550 None:intergenic 45.0%
!! GAATAAAAATAAAATAAAAA+AGG + chr1.2:76329588-76329607 None:intergenic 5.0%
AAAGCATGGCCATTGTGGAC+AGG + chr1.2:76330410-76330429 None:intergenic 50.0%
AGTTGGTCCAGCATAGTGCA+TGG + chr1.2:76331111-76331130 None:intergenic 50.0%
CAAAGTTCCGGAACCTGTTC+CGG - chr1.2:76331755-76331774 MS.gene34410:CDS 50.0%
CATATCAAGAAGCCGCTTGC+GGG + chr1.2:76330447-76330466 None:intergenic 50.0%
CCAGGGCACATAAATCCATC+AGG + chr1.2:76331681-76331700 None:intergenic 50.0%
CCATATCAAGAAGCCGCTTG+CGG + chr1.2:76330448-76330467 None:intergenic 50.0%
CCTCTTGCTTCATCCACTTG+GGG - chr1.2:76330484-76330503 MS.gene34410:intron 50.0%
CGCAAGCGGCTTCTTGATAT+GGG - chr1.2:76330446-76330465 MS.gene34410:intron 50.0%
CTCTTGCTTCATCCACTTGG+GGG - chr1.2:76330485-76330504 MS.gene34410:intron 50.0%
CTGGAACGCAAACACAGCAT+CGG + chr1.2:76330378-76330397 None:intergenic 50.0%
GAAAGGATAGCTCGGACTTG+GGG - chr1.2:76330185-76330204 MS.gene34410:intron 50.0%
GAGAGAGTGAGAAGGGAAAG+AGG + chr1.2:76328523-76328542 None:intergenic 50.0%
GATCTGTATGATGCCGACCA+CGG - chr1.2:76331230-76331249 MS.gene34410:intron 50.0%
GCAAAGGCTAGGATCAATGC+TGG - chr1.2:76331146-76331165 MS.gene34410:intron 50.0%
GGGCACATAAATCCATCAGG+AGG + chr1.2:76331678-76331697 None:intergenic 50.0%
GGGTTCATGTGCTGAGTGAA+GGG - chr1.2:76328763-76328782 MS.gene34410:intron 50.0%
GGTTTGATTGAACCGGATGG+TGG - chr1.2:76328639-76328658 MS.gene34410:intron 50.0%
GTTGGTCCAGCATAGTGCAT+GGG + chr1.2:76331110-76331129 None:intergenic 50.0%
TAATGACCGATACCCGCAAG+CGG - chr1.2:76330432-76330451 MS.gene34410:intron 50.0%
TCAGTTAGAGCTGCCCCATA+TGG - chr1.2:76330964-76330983 MS.gene34410:intron 50.0%
TCATGTGCTGAGTGAAGGGT+GGG - chr1.2:76328767-76328786 MS.gene34410:intron 50.0%
TCTGATGGGAGGGGCAAAAT+GGG + chr1.2:76328562-76328581 None:intergenic 50.0%
TGCAGATGCGAACACTTGCT+AGG - chr1.2:76331640-76331659 MS.gene34410:CDS 50.0%
TGCGCCTTGTGAACTCATCA+CGG + chr1.2:76330352-76330371 None:intergenic 50.0%
TGGGTTCATGTGCTGAGTGA+AGG - chr1.2:76328762-76328781 MS.gene34410:intron 50.0%
TTCATGTGCTGAGTGAAGGG+TGG - chr1.2:76328766-76328785 MS.gene34410:intron 50.0%
! ACAAGTTGAGCCAAACCACC+GGG - chr1.2:76329234-76329253 MS.gene34410:intron 50.0%
! GATGGATTTATGTGCCCTGG+TGG - chr1.2:76331681-76331700 MS.gene34410:CDS 50.0%
! TCCGGTTTGATTGAACCGGA+TGG - chr1.2:76328636-76328655 MS.gene34410:intron 50.0%
! TCGGAGTTTCTGATTGGCTC+TGG + chr1.2:76328610-76328629 None:intergenic 50.0%
!! CCTGATGGATTTATGTGCCC+TGG - chr1.2:76331678-76331697 MS.gene34410:CDS 50.0%
!! CTACGTTGACTCTGATGGGA+GGG + chr1.2:76328572-76328591 None:intergenic 50.0%
!! CTCATCACGGAGTTCTGAAG+GGG + chr1.2:76330339-76330358 None:intergenic 50.0%
!! GTTGATTGGTGGTGACCTAG+AGG - chr1.2:76330265-76330284 MS.gene34410:intron 50.0%
!! TACGTTGACTCTGATGGGAG+GGG + chr1.2:76328571-76328590 None:intergenic 50.0%
AAACCACCGGGCAAGTGGTT+GGG - chr1.2:76329246-76329265 MS.gene34410:intron 55.0%
AAACCTCCCAACCACTTGCC+CGG + chr1.2:76329255-76329274 None:intergenic 55.0%
AAGAAGCCGCTTGCGGGTAT+CGG + chr1.2:76330441-76330460 None:intergenic 55.0%
ACTTGGGGAACAACTGCTCC+CGG - chr1.2:76330200-76330219 MS.gene34410:intron 55.0%
ATGTTTAGGCGCTCGAGTCC+AGG + chr1.2:76331278-76331297 None:intergenic 55.0%
CAGCATAGTGCATGGGAGAC+GGG + chr1.2:76331103-76331122 None:intergenic 55.0%
CCAGCATAGTGCATGGGAGA+CGG + chr1.2:76331104-76331123 None:intergenic 55.0%
CCCCAAGTGGATGAAGCAAG+AGG + chr1.2:76330487-76330506 None:intergenic 55.0%
CCGCAAGCGGCTTCTTGATA+TGG - chr1.2:76330445-76330464 MS.gene34410:intron 55.0%
CTCCGGAATCCTGTCCACAA+TGG - chr1.2:76330398-76330417 MS.gene34410:intron 55.0%
CTCTGATGGGAGGGGCAAAA+TGG + chr1.2:76328563-76328582 None:intergenic 55.0%
CTGTGTTTGCGTTCCAGCTC+CGG - chr1.2:76330381-76330400 MS.gene34410:intron 55.0%
GATTTATGTGCCCTGGTGGC+TGG - chr1.2:76331685-76331704 MS.gene34410:CDS 55.0%
GCACTATGCTGGACCAACTG+AGG - chr1.2:76331112-76331131 MS.gene34410:intron 55.0%
GCTTTGGTATAGCCCCCAAG+TGG + chr1.2:76330500-76330519 None:intergenic 55.0%
GGCCATTGTGGACAGGATTC+CGG + chr1.2:76330403-76330422 None:intergenic 55.0%
GTGCATGGGAGACGGGAATA+TGG + chr1.2:76331096-76331115 None:intergenic 55.0%
TGAGGTGCAGTGGCATGCAA+AGG - chr1.2:76331130-76331149 MS.gene34410:intron 55.0%
TGCAGTGGCATGCAAAGGCT+AGG - chr1.2:76331135-76331154 MS.gene34410:intron 55.0%
TTCTTCGGCATAAGGCAGGC+CGG + chr1.2:76330222-76330241 None:intergenic 55.0%
!! GCTACGTTGACTCTGATGGG+AGG + chr1.2:76328573-76328592 None:intergenic 55.0%
ACTAGCACCTTCCAGCCACC+AGG + chr1.2:76331699-76331718 None:intergenic 60.0%
ATTGTCGGTCGAGACCCTGC+AGG - chr1.2:76331182-76331201 MS.gene34410:intron 60.0%
CAAACCACCGGGCAAGTGGT+TGG - chr1.2:76329245-76329264 MS.gene34410:intron 60.0%
CAACCACTTGCCCGGTGGTT+TGG + chr1.2:76329247-76329266 None:intergenic 60.0%
CCGTCTCCCATGCACTATGC+TGG - chr1.2:76331101-76331120 MS.gene34410:intron 60.0%
CTAGCACCTTCCAGCCACCA+GGG + chr1.2:76331698-76331717 None:intergenic 60.0%
CTGGACCAACTGAGGTGCAG+TGG - chr1.2:76331120-76331139 MS.gene34410:intron 60.0%
GCATGCCACTGCACCTCAGT+TGG + chr1.2:76331128-76331147 None:intergenic 60.0%
TATGTGCCCTGGTGGCTGGA+AGG - chr1.2:76331689-76331708 MS.gene34410:CDS 60.0%
TCTTCGGCATAAGGCAGGCC+GGG + chr1.2:76330221-76330240 None:intergenic 60.0%
TGTGGACAGGATTCCGGAGC+TGG + chr1.2:76330397-76330416 None:intergenic 60.0%
ACAGGATGGCCCATGCCTGC+AGG + chr1.2:76331200-76331219 None:intergenic 65.0%
CAGGATGGCCCATGCCTGCA+GGG + chr1.2:76331199-76331218 None:intergenic 65.0%
GAGCCAAACCACCGGGCAAG+TGG - chr1.2:76329241-76329260 MS.gene34410:intron 65.0%
GGTCGAGACCCTGCAGGCAT+GGG - chr1.2:76331188-76331207 MS.gene34410:intron 65.0%
!! GAAGGGTGGGCTACCCCACT+TGG - chr1.2:76328780-76328799 MS.gene34410:intron 65.0%
CCACCGGGCAAGTGGTTGGG+AGG - chr1.2:76329249-76329268 MS.gene34410:intron 70.0%
CCTCCCAACCACTTGCCCGG+TGG + chr1.2:76329252-76329271 None:intergenic 70.0%
CGGTCGAGACCCTGCAGGCA+TGG - chr1.2:76331187-76331206 MS.gene34410:intron 70.0%
!! GGGTGGGCTACCCCACTTGG+TGG - chr1.2:76328783-76328802 MS.gene34410:intron 70.0%


Chromosome Type Strat End Strand Name
chr1.2 gene 76328489 76331782 76328489 ID=MS.gene34410
chr1.2 mRNA 76328489 76331782 76328489 ID=MS.gene34410.t1;Parent=MS.gene34410
chr1.2 exon 76331277 76331782 76331277 ID=MS.gene34410.t1.exon1;Parent=MS.gene34410.t1
chr1.2 CDS 76331277 76331782 76331277 ID=cds.MS.gene34410.t1;Parent=MS.gene34410.t1
chr1.2 exon 76329709 76330114 76329709 ID=MS.gene34410.t1.exon2;Parent=MS.gene34410.t1
chr1.2 CDS 76329709 76330114 76329709 ID=cds.MS.gene34410.t1;Parent=MS.gene34410.t1
chr1.2 exon 76328961 76329221 76328961 ID=MS.gene34410.t1.exon3;Parent=MS.gene34410.t1
chr1.2 CDS 76328961 76329221 76328961 ID=cds.MS.gene34410.t1;Parent=MS.gene34410.t1
chr1.2 exon 76328791 76328877 76328791 ID=MS.gene34410.t1.exon4;Parent=MS.gene34410.t1
chr1.2 CDS 76328791 76328877 76328791 ID=cds.MS.gene34410.t1;Parent=MS.gene34410.t1
chr1.2 exon 76328489 76328626 76328489 ID=MS.gene34410.t1.exon5;Parent=MS.gene34410.t1
chr1.2 CDS 76328489 76328626 76328489 ID=cds.MS.gene34410.t1;Parent=MS.gene34410.t1
Gene Sequence

>MS.gene34410

ATGGCTTCCATGGCTACCCTTTTGTCCAAAACCTCTTTCCCTTCTCACTCTCTCTCCAAAACGTTTGATACCCATTTTGCCCCTCCCATCAGAGTCAACGTAGCAATTGGCGCAAAAGCCAGAGCCAATCAGAAACTCCGAGTTTCATCCGGTTTGATTGAACCGGATGGTGGAAAATTGGTAGAGCTTGTGGTGGAAGAATCAAAGAGAGATTTGAAAAAAGGTGAAGCTTTATCATTGCCAAGGATAAAGCTTTCAAAGATTGATGTTGAATGGGTTCATGTGCTGAGTGAAGGGTGGGCTACCCCACTTGGTGGTTTCATGAGAGAAAGAGAGTTCCTCCAAACGCTTCATTTCAATTCACTTAGACTCAATGATGGGTCTTTTGTGAATATGTCTGTTCCGATTGTTTTGGCTATTGATGATGATCAGAAACATCGGATCGGTGAATCTACAAAAGTTGCTCTTTTTGATTCTAAGGGTAACCCTGTTGCCATTCTCAAAGAGTAAGATACCTTTTTCTTCTCTTGTTCATGTATAGCATACTTATAATGTTTTTGTTATTTTCTTTTATTAGTATGTAAATTTCATAACTTTTAGCATTTTTTTTCTTGTATCCTATGTAAATTTCATGTTTTTGTGAGGTTTTGTTTTTTGTCTGTTCTTAGGGGGGAATATAATCTGGTAATCTAGGTTAGTTAAAGCCCAATAAAAATATTGTTACTCCCAACTTGATTAATCCTCAACAAGTTGAGCCAAACCACCGGGCAAGTGGTTGGGAGGTTTGATTGTTTGTGTTATGAATATAGTTTCCATTTTTGTTTTTTTATGAGAGATATACTTTTGTAAATTGTACTAGTATTGTTTTCAATATGCAGGGTTGATTGCCTTCTTTAGCCAATCATAGAGTTTAATTGGTCAATTATTGTAGGTCAGAATATGATGAAGATAAGCTCATTTTCCGTACATGTTTTGTTTCCTTGTTTTAATTCTTTTTCATTTTGTGTTGGAATGTTATGATTGGTTGGATAGTCAACAATTCATATAATGCCGTGATGATTTTGAGATAGTTTTCCTCTATTGTCATTGTTTGCCTCCTTTTTTATTTTATTTTTATTCATATGAATTCAATCTTATTTTGTATTTAGTCATATCATGTTCTATTTACCAATGTTGGTTGTTCTGATGATTGGTAAGGAACTAAAACAATACCTCGTTATAAAGCATTGTGAAATAGACTATAGGAAAAAGTACACCCACAAAACCTCTAGATACATAGGGTCTTTGACCAAACAAATACAAAAATAAATTAGATTTTGTTTTCATCTTCCTTATTTCAACTGGGAAATTTAAGATAAGTTCAAGAAGACAATATTCTCACTGAACACTATGCAATAAGATATACATTGAATATATAGTGTTTGTATAGACATATGTTTTCTTGTTGCAAATAGGAGAATGTGTCCATACATAATCATGCCATGAATATTGTATTTTGTCTACTATTGCCGTTTCTAGTTGATTGTGTTGAATGTCTCTATGTGCATTATTTGCATAGTGATTTTATTAAACACGTTTTTATGCATAGTAATATTTATGTGTGATTTTCATTTTTTTATTTGTTCCATTTGTTTCCTATGACTAATATTTTTCATCTGGCTATTTCAGTATCGAAATTTATAAGCATCCTAAAGAAGAAAGGATAGCTCGGACTTGGGGAACAACTGCTCCCGGCCTGCCTTATGCCGAAGAAACTATAACTAATGCTGGAAATTGGTTGATTGGTGGTGACCTAGAGGTTATAGAACCCATCAAGTATCATGATGGGCTTGATCATTTTCGTCTGTCCCCTTCAGAACTCCGTGATGAGTTCACAAGGCGCAATGCCGATGCTGTGTTTGCGTTCCAGCTCCGGAATCCTGTCCACAATGGCCATGCTTTGCTAATGACCGATACCCGCAAGCGGCTTCTTGATATGGGTTACAAGAATCCGATCCTCTTGCTTCATCCACTTGGGGGCTATACCAAAGCTGATGATGTCCCTCTTGATTGGAGAATGAAACAACATGAGAAGGTATGTGCACTAGTGAATATGTGACTACAGAGTCTCATTTTTGAAGCTATGCCACTTTTTTCTTTTCTTTTTGTGTATTTCTTGCTTTTCCACATATGCACGTTTCCCTTCTAATCAGTGTTCTTAAATAGCGGCTAATCGGCTATAGAGTCCCATAATGCTATAGCATAGCAGAATTTTAACAAACCACTATTGTTTTATGATATGCTATTTAGTACAAAATGCTGTCAAATAGTAGAGCTATCACATTGTTGTTCAGTAGAATTTGAAAAACCCGTTATTTTTTGTGAGCTGGATGGACAACATTGCTTCTAATTTCTATAGTTTTACTATATCCAAACTATAGTTGACCAAGAAACTGTAGTTGATTAAGAACATAATTAATTTACCTACCACAAAAATCAGTTAGAGCTGCCCCATATGGTTCAAGTTGCTTTTTTGGATGGAAAATTTCACTTATAACTTGTATCTTTTGATCTTTCTTTAGGTACTTGAGGATGGTGTTCTCGATCCAGAGACAACAGTTGTGTCCATATTCCCGTCTCCCATGCACTATGCTGGACCAACTGAGGTGCAGTGGCATGCAAAGGCTAGGATCAATGCTGGGGCAAACTTCTACATTGTCGGTCGAGACCCTGCAGGCATGGGCCATCCTGTTGAAAAAAGAGATCTGTATGATGCCGACCACGGAAAGAAAGTATTGAGCATGGCACCTGGACTCGAGCGCCTAAACATTCTTCCTTTCAGGGTAATTGATGAACTTATTTTCTCACTAATAACTATATGAGGTTCACATAGGTCTCTTTGATGATTATTTCCATTCATTTGTAGGTTGCTGCTTATGACAAGACTCAGGGTAAGATGGCATTCTTTGATCCATCAAGGCCTCAAGATTTCGTCTTCATATCAGGCACAAAGGTATGTTTGTTATGTGATTTTGGAACACACGTTTGTTCTAACAAACTATGAAGCACCGACATAGACACAAACACCAAACATGACACTGATGCTGACACATCTACACAAGTTCCATTTATGTTGTATCTTAATCTTAATTAACAAAGGTTACTTGCATTTTGCAGATGCGAACACTTGCTAGGAACAAAGAAAGTCCTCCTGATGGATTTATGTGCCCTGGTGGCTGGAAGGTGCTAGTTGACTATTATGATAGTTTAGTGCTTTCAAGCAATGGCAAAGTTCCGGAACCTGTTCCGGTCTAG
Protein sequence

>MS.gene34410.t1

MASMATLLSKTSFPSHSLSKTFDTHFAPPIRVNVAIGAKARANQKLRVSSGLIEPDGGKLVELVVEESKRDLKKGEALSLPRIKLSKIDVEWVHVLSEGWATPLGGFMREREFLQTLHFNSLRLNDGSFVNMSVPIVLAIDDDQKHRIGESTKVALFDSKGNPVAILKDIEIYKHPKEERIARTWGTTAPGLPYAEETITNAGNWLIGGDLEVIEPIKYHDGLDHFRLSPSELRDEFTRRNADAVFAFQLRNPVHNGHALLMTDTRKRLLDMGYKNPILLLHPLGGYTKADDVPLDWRMKQHEKVLEDGVLDPETTVVSIFPSPMHYAGPTEVQWHAKARINAGANFYIVGRDPAGMGHPVEKRDLYDADHGKKVLSMAPGLERLNILPFRVAAYDKTQGKMAFFDPSRPQDFVFISGTKMRTLARNKESPPDGFMCPGGWKVLVDYYDSLVLSSNGKVPEPVPV