AlfalfaGEDB | MS.gene007396

M. sativa cultivar XinJiangDaYe / MS.gene007396

KEGG: K00789
GO: GO:0000166 GO:0003674 GO:0003824 GO:0004478 GO:0005488 GO:0005524 GO:0006556 GO:0006732 GO:0006790 GO:0008144 GO:0008150 GO:0008152 GO:0009058 GO:0009108 GO:0009987 GO:0016740 GO:0016765 GO:0017076 GO:0017144 GO:0030554 GO:0032553 GO:0032555 GO:0032559 GO:0035639 GO:0036094 GO:0043167 GO:0043168 GO:0044237 GO:0044249 GO:0044272 GO:0046500 GO:0051186 GO:0051188 GO:0071704 GO:0097159 GO:0097367 GO:1901265 GO:1901363 GO:1901576
PFAM: PF00438.23 PF02772.19 PF02773.19

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene007396.t1	XP_003625682.2	100	390	0	0	1	390	1	390	1.10E-227	798.9

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene007396.t1	P43282	95.6	390	17	0	1	390	1	390	8.2e-221	767.3

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene007396.t1	G7L3W1	100.0	390	0	0	1	390	1	390	7.6e-228	798.9

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR

PPI:

Gene1	Gene2	Type
MS.gene007396	MS.gene050426	PPI
MS.gene007396	MS.gene28853	PPI
MS.gene007396	MS.gene28651	PPI
MS.gene072659	MS.gene007396	PPI

Query id	Subject id	identity %	alignment length	mismatches	q. start	q. end	s. start	s. end	bit score
MS.gene007396.t1	MTR_7g102120	100.000	390	0	1	390	1	390	808
MS.gene007396.t1	MTR_1g063060	94.103	390	23	1	390	19	408	741
MS.gene007396.t1	MTR_1g063060	94.103	390	23	1	390	1	390	740
MS.gene007396.t1	MTR_7g110310	88.860	386	43	2	387	3	388	704
MS.gene007396.t1	MTR_2g046710	90.674	386	36	2	387	4	389	704
MS.gene007396.t1	MTR_4g123810	90.155	386	38	2	387	4	389	699

Query id	Subject id	identity %	alignment length	mismatches	q. start	q. end	s. start	s. end	bit score
MS.gene007396.t1	AT2G36880	93.077	390	27	1	390	1	390	731
MS.gene007396.t1	AT2G36880	93.077	390	27	1	390	1	390	731
MS.gene007396.t1	AT3G17390	90.698	387	36	1	387	1	387	708
MS.gene007396.t1	AT4G01850	88.889	387	43	1	387	1	387	700
MS.gene007396.t1	AT4G01850	88.889	387	43	1	387	1	387	700
MS.gene007396.t1	AT1G02500	89.922	387	39	1	387	1	387	700
MS.gene007396.t1	AT1G02500	89.922	387	39	1	387	1	387	700

Find 102 sgRNAs with CRISPR-Local

Find 115 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
CCATAGCTCCGTTATCATTT+TGG	0.158559	7.4:+8622992	None:intergenic
ACTGCTGCATATGGCCATTT+TGG	0.193128	7.4:-8622427	MS.gene007396:CDS
CCATCTGGTCGGTTTGTTAT+TGG	0.197743	7.4:-8622820	MS.gene007396:CDS
TCACATGCAACCTTACTTTC+TGG	0.212828	7.4:+8623414	None:intergenic
CGAGACACTTGCAGAGGAAT+TGG	0.296576	7.4:-8623312	MS.gene007396:CDS
ACTAACATGGTTATGGTCTT+TGG	0.303812	7.4:-8623378	MS.gene007396:CDS
CACATGCAACCTTACTTTCT+GGG	0.310592	7.4:+8623415	None:intergenic
GGCCATATGCAGCAGTCTTT+TGG	0.329152	7.4:+8622434	None:intergenic
ACCTGATCACACAGCTTGTC+GGG	0.335375	7.4:+8623474	None:intergenic
CATGGAGGAGGTGCCTTCTC+TGG	0.336553	7.4:-8622727	MS.gene007396:CDS
CCCTGAAGCTACCACACTTT+TGG	0.336878	7.4:+8622651	None:intergenic
GCCAAAAGTGTGGTAGCTTC+AGG	0.346842	7.4:-8622652	MS.gene007396:CDS
AGATTATTGGAAATCATTCC+TGG	0.346876	7.4:+8622487	None:intergenic
TCAAAAGAGGTGGCAACTTC+AGG	0.361522	7.4:-8622459	MS.gene007396:CDS
CAGGATCATCCCGTCCAAAA+TGG	0.362727	7.4:+8622413	None:intergenic
CCACTTCTATCGACCTTGGT+TGG	0.382632	7.4:+8622697	None:intergenic
GGCTGGGGTGCTCATGGAGG+AGG	0.385528	7.4:-8622739	MS.gene007396:CDS
CTCATAGTTCACAGTAGCCT+TGG	0.390492	7.4:+8623344	None:intergenic
AGCTTGCAAACTCAAGCCTT+TGG	0.392916	7.4:+8622358	None:intergenic
TGAACTCCTTGAGCGATATC+AGG	0.407674	7.4:+8623219	None:intergenic
CACTTCTATCGACCTTGGTT+GGG	0.408524	7.4:+8622698	None:intergenic
TATGGTGGCTGGGGTGCTCA+TGG	0.408565	7.4:-8622745	MS.gene007396:CDS
GTGCAGGTTTCTTATGCAAT+TGG	0.414240	7.4:-8622610	MS.gene007396:CDS
AATTCCAGACAAGGACATCT+TGG	0.414364	7.4:-8622539	MS.gene007396:CDS
TTTGTTGACACATACAAAAC+AGG	0.415934	7.4:-8622565	MS.gene007396:CDS
ACAGTCTCCCAGGTGAAATC+AGG	0.423808	7.4:+8622394	None:intergenic
TACAAAGACTAACATGGTTA+TGG	0.436292	7.4:-8623385	MS.gene007396:CDS
TGCAAGACGTTGCATTGTGC+AGG	0.438573	7.4:-8622626	MS.gene007396:CDS
CCCCGACAAGCTGTGTGATC+AGG	0.440463	7.4:-8623475	MS.gene007396:CDS
GATATCGCTCAAGGAGTTCA+TGG	0.445977	7.4:-8623216	MS.gene007396:CDS
GCAGCAAGACCCAGAAAGTA+AGG	0.446581	7.4:-8623424	MS.gene007396:CDS
ACAAAACATGCGCATGGCTT+AGG	0.449886	7.4:-8623047	MS.gene007396:CDS
AGAACCAAGATGTCCTTGTC+TGG	0.450791	7.4:+8622535	None:intergenic
TTTGGTACTCAACAGTAACT+TGG	0.455837	7.4:+8623010	None:intergenic
TCTGGTCGGTTTGTTATTGG+TGG	0.458272	7.4:-8622817	MS.gene007396:CDS
GAAGTGGGGCATATATTGTT+AGG	0.460316	7.4:-8622681	MS.gene007396:CDS
GAGTATCTTGACAGTCTCCC+AGG	0.461385	7.4:+8622384	None:intergenic
TACCAAAAGACTGCTGCATA+TGG	0.464990	7.4:-8622436	MS.gene007396:CDS
ACAAATACAGAAAGTGGCTC+TGG	0.466173	7.4:+8622583	None:intergenic
TTTGTTATTGGTGGACCTCA+TGG	0.466434	7.4:-8622808	MS.gene007396:CDS
AGGACAGTGTGCACACGGAT+TGG	0.468164	7.4:+8622967	None:intergenic
TCACCAGCACCAATTTCCTC+TGG	0.468785	7.4:+8623177	None:intergenic
AACCTGATCACACAGCTTGT+CGG	0.469901	7.4:+8623473	None:intergenic
ATCTTCCATCTCAATCCATC+TGG	0.470979	7.4:-8622835	MS.gene007396:CDS
GGACAGTGTGCACACGGATT+GGG	0.473091	7.4:+8622968	None:intergenic
CCAAAAGTGTGGTAGCTTCA+GGG	0.478895	7.4:-8622651	MS.gene007396:CDS
TTATTGACACCTATGGTGGC+TGG	0.480591	7.4:-8622756	MS.gene007396:CDS
GGTGACCAAGGTCACATGTT+TGG	0.484772	7.4:-8623159	MS.gene007396:CDS
GGTTGGGTCCTTGCCAGAGA+AGG	0.492679	7.4:+8622714	None:intergenic
TATTGACACCTATGGTGGCT+GGG	0.497719	7.4:-8622755	MS.gene007396:CDS
GTGTCAACAAATACAGAAAG+TGG	0.512228	7.4:+8622577	None:intergenic
TGAGTAAGTGGCATTAGCTC+AGG	0.517740	7.4:+8623117	None:intergenic
GGAAGATAGTCTTGTCATCA+AGG	0.520901	7.4:+8622851	None:intergenic
GGTGGACCTCATGGAGATGC+AGG	0.523297	7.4:-8622799	MS.gene007396:CDS
AAGATCATTATTGACACCTA+TGG	0.523504	7.4:-8622763	MS.gene007396:CDS
CATGGAGATGCAGGACTCAC+TGG	0.526918	7.4:-8622790	MS.gene007396:CDS
AATAATCTTGACCTCAAAAG+AGG	0.536379	7.4:-8622472	MS.gene007396:CDS
TTGGTACTCAACAGTAACTT+GGG	0.543019	7.4:+8623011	None:intergenic
GTAGCAAGCACATGAGTAAG+TGG	0.543954	7.4:+8623105	None:intergenic
GTTGAGTACCAAAATGATAA+CGG	0.545577	7.4:-8623000	MS.gene007396:CDS
TGCCCCACTTCTATCGACCT+TGG	0.546010	7.4:+8622693	None:intergenic
CCAAAATGATAACGGAGCTA+TGG	0.548166	7.4:-8622992	MS.gene007396:CDS
AAACCAGAGGAAATTGGTGC+TGG	0.551112	7.4:-8623180	MS.gene007396:CDS
GGGATGATCCTGATTTCACC+TGG	0.551255	7.4:-8622402	MS.gene007396:CDS
CATGTGCTTGCTACTAAACT+CGG	0.555316	7.4:-8623096	MS.gene007396:CDS
TGCGCATGGCTTAGGCCTGA+TGG	0.560731	7.4:-8623039	MS.gene007396:CDS
TAGCTCAGGTGTTTCATCTG+TGG	0.560925	7.4:+8623131	None:intergenic
GGTGGCTGGGGTGCTCATGG+AGG	0.565014	7.4:-8622742	MS.gene007396:CDS
GAAATTGGTGCTGGTGACCA+AGG	0.570337	7.4:-8623171	MS.gene007396:CDS
ATGAGCACCCCAGCCACCAT+AGG	0.576048	7.4:+8622747	None:intergenic
CAAATACAGAAAGTGGCTCT+GGG	0.576109	7.4:+8622584	None:intergenic
TCCATCTCAATCCATCTGGT+CGG	0.577302	7.4:-8622831	MS.gene007396:CDS
CTGCAAACATGCATCAAGGA+TGG	0.580545	7.4:+8623443	None:intergenic
CATAGCCAAACATGTGACCT+TGG	0.582504	7.4:+8623154	None:intergenic
ATTGACACCTATGGTGGCTG+GGG	0.585915	7.4:-8622754	MS.gene007396:CDS
TGACAGATTCTGAGGTGAAG+AGG	0.586047	7.4:+8623508	None:intergenic
CAACCAAGGTCGATAGAAGT+GGG	0.589471	7.4:-8622696	MS.gene007396:CDS
AGGAGGTGCCTTCTCTGGCA+AGG	0.599631	7.4:-8622722	MS.gene007396:CDS
CCAACCAAGGTCGATAGAAG+TGG	0.601493	7.4:-8622697	MS.gene007396:CDS
ACCTTCGTTGACAGATTCTG+AGG	0.606247	7.4:+8623500	None:intergenic
ATCATTATTGACACCTATGG+TGG	0.611359	7.4:-8622760	MS.gene007396:CDS
CTTGCTGCAAACATGCATCA+AGG	0.611540	7.4:+8623439	None:intergenic
CCAATAACAAACCGACCAGA+TGG	0.611757	7.4:+8622820	None:intergenic
AGATGAGGACAGTGTGCACA+CGG	0.613951	7.4:+8622962	None:intergenic
CATCGTGCTGAGTTGAGATG+AGG	0.617276	7.4:+8622947	None:intergenic
ACCGACCAGATGGATTGAGA+TGG	0.617816	7.4:+8622830	None:intergenic
GGATTCGTATCAGCTGATGT+TGG	0.619951	7.4:-8623291	MS.gene007396:CDS
CAGAGTCCTGATATCGCTCA+AGG	0.622943	7.4:-8623225	MS.gene007396:CDS
GAAAGAACAAAACATGCGCA+TGG	0.625968	7.4:-8623053	MS.gene007396:CDS
AATCTTGACCTCAAAAGAGG+TGG	0.633225	7.4:-8622469	MS.gene007396:CDS
CTCTGGCAAGGACCCAACCA+AGG	0.634793	7.4:-8622710	MS.gene007396:CDS
GAGATGCAGGACTCACTGGT+AGG	0.648576	7.4:-8622786	MS.gene007396:CDS
ACCTCAGAATCTGTCAACGA+AGG	0.652365	7.4:-8623501	MS.gene007396:CDS
CCTGATCACACAGCTTGTCG+GGG	0.668924	7.4:+8623475	None:intergenic
GGATGATCCTGATTTCACCT+GGG	0.669087	7.4:-8622401	MS.gene007396:CDS
TGTCAAGATACTCAAGCCAA+AGG	0.679722	7.4:-8622374	MS.gene007396:CDS
ATAGTTCGAGACACTTGCAG+AGG	0.698300	7.4:-8623318	MS.gene007396:CDS
AACCAAGGTCGATAGAAGTG+GGG	0.698373	7.4:-8622695	MS.gene007396:CDS
CTTTGGTGAGATAACAACCA+AGG	0.702167	7.4:-8623361	MS.gene007396:CDS
TAGGCAAGCAGCCAAAAGTG+TGG	0.702229	7.4:-8622662	MS.gene007396:CDS
GTGAGTCCTGCATCTCCATG+AGG	0.711004	7.4:+8622793	None:intergenic
GACATGTACAAAGACTAACA+TGG	0.784188	7.4:-8623391	MS.gene007396:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
	AAGATCATTATTGACACCTA+TGG	-	chr7.4:8623125-8623144	MS.gene007396:CDS	30.0%
	AATAATCTTGACCTCAAAAG+AGG	-	chr7.4:8623416-8623435	MS.gene007396:CDS	30.0%
	AGATTATTGGAAATCATTCC+TGG	+	chr7.4:8623404-8623423	None:intergenic	30.0%
	GTTGAGTACCAAAATGATAA+CGG	-	chr7.4:8622888-8622907	MS.gene007396:CDS	30.0%
	TACAAAGACTAACATGGTTA+TGG	-	chr7.4:8622503-8622522	MS.gene007396:CDS	30.0%
	TTTGTTGACACATACAAAAC+AGG	-	chr7.4:8623323-8623342	MS.gene007396:CDS	30.0%
!!!	TCTTTTGAGGTCAAGATTAT+TGG	+	chr7.4:8623417-8623436	None:intergenic	30.0%
!!!	TTAAAGAGCATTTTGACTTC+AGG	-	chr7.4:8623378-8623397	MS.gene007396:CDS	30.0%
	AACAGGAAAAATTCCAGACA+AGG	-	chr7.4:8623340-8623359	MS.gene007396:CDS	35.0%
	ACCAAAAAACCAGAGGAAAT+TGG	-	chr7.4:8622702-8622721	MS.gene007396:CDS	35.0%
	ACTAACATGGTTATGGTCTT+TGG	-	chr7.4:8622510-8622529	MS.gene007396:CDS	35.0%
	ATCATTATTGACACCTATGG+TGG	-	chr7.4:8623128-8623147	MS.gene007396:CDS	35.0%
	GACATGTACAAAGACTAACA+TGG	-	chr7.4:8622497-8622516	MS.gene007396:CDS	35.0%
	GTGTCAACAAATACAGAAAG+TGG	+	chr7.4:8623314-8623333	None:intergenic	35.0%
	TTGGTACTCAACAGTAACTT+GGG	+	chr7.4:8622880-8622899	None:intergenic	35.0%
	TTTGGTACTCAACAGTAACT+TGG	+	chr7.4:8622881-8622900	None:intergenic	35.0%
!!	TGTCATCAAGGTATTTTGCT+GGG	+	chr7.4:8623028-8623047	None:intergenic	35.0%
!!	TTGTCATCAAGGTATTTTGC+TGG	+	chr7.4:8623029-8623048	None:intergenic	35.0%
!!!	ACCAATTTCCTCTGGTTTTT+TGG	+	chr7.4:8622706-8622725	None:intergenic	35.0%
	AATCTTGACCTCAAAAGAGG+TGG	-	chr7.4:8623419-8623438	MS.gene007396:CDS	40.0%
	AATTCCAGACAAGGACATCT+TGG	-	chr7.4:8623349-8623368	MS.gene007396:CDS	40.0%
	ACAAATACAGAAAGTGGCTC+TGG	+	chr7.4:8623308-8623327	None:intergenic	40.0%
	ATCTTCCATCTCAATCCATC+TGG	-	chr7.4:8623053-8623072	MS.gene007396:CDS	40.0%
	CAAATACAGAAAGTGGCTCT+GGG	+	chr7.4:8623307-8623326	None:intergenic	40.0%
	CACATGCAACCTTACTTTCT+GGG	+	chr7.4:8622476-8622495	None:intergenic	40.0%
	CTTTGGTGAGATAACAACCA+AGG	-	chr7.4:8622527-8622546	MS.gene007396:CDS	40.0%
	GAAAGAACAAAACATGCGCA+TGG	-	chr7.4:8622835-8622854	MS.gene007396:CDS	40.0%
	GAAGTGGGGCATATATTGTT+AGG	-	chr7.4:8623207-8623226	MS.gene007396:CDS	40.0%
	GTGCAGGTTTCTTATGCAAT+TGG	-	chr7.4:8623278-8623297	MS.gene007396:CDS	40.0%
	TACCAAAAGACTGCTGCATA+TGG	-	chr7.4:8623452-8623471	MS.gene007396:CDS	40.0%
	TCACATGCAACCTTACTTTC+TGG	+	chr7.4:8622477-8622496	None:intergenic	40.0%
	TCACTTGACCAAAAAACCAG+AGG	-	chr7.4:8622695-8622714	MS.gene007396:CDS	40.0%
	TGTCAAGATACTCAAGCCAA+AGG	-	chr7.4:8623514-8623533	MS.gene007396:CDS	40.0%
!	AGGTATTTTGCTGGGATAAC+AGG	+	chr7.4:8623020-8623039	None:intergenic	40.0%
!	CATGTGCTTGCTACTAAACT+CGG	-	chr7.4:8622792-8622811	MS.gene007396:CDS	40.0%
!	CCATAGCTCCGTTATCATTT+TGG	+	chr7.4:8622899-8622918	None:intergenic	40.0%
!	GTAACTTGGGTTTTACCATC+AGG	+	chr7.4:8622867-8622886	None:intergenic	40.0%
!!	CCAAAATGATAACGGAGCTA+TGG	-	chr7.4:8622896-8622915	MS.gene007396:CDS	40.0%
!!	GGAAGATAGTCTTGTCATCA+AGG	+	chr7.4:8623040-8623059	None:intergenic	40.0%
!!	TTTGTTATTGGTGGACCTCA+TGG	-	chr7.4:8623080-8623099	MS.gene007396:CDS	40.0%
	AAACCAGAGGAAATTGGTGC+TGG	-	chr7.4:8622708-8622727	MS.gene007396:CDS	45.0%
	AACCAAGGTCGATAGAAGTG+GGG	-	chr7.4:8623193-8623212	MS.gene007396:CDS	45.0%
	AACCTGATCACACAGCTTGT+CGG	+	chr7.4:8622418-8622437	None:intergenic	45.0%
	ACAAAACATGCGCATGGCTT+AGG	-	chr7.4:8622841-8622860	MS.gene007396:CDS	45.0%
	ACCTCAGAATCTGTCAACGA+AGG	-	chr7.4:8622387-8622406	MS.gene007396:CDS	45.0%
	ACCTTCGTTGACAGATTCTG+AGG	+	chr7.4:8622391-8622410	None:intergenic	45.0%
	AGAACCAAGATGTCCTTGTC+TGG	+	chr7.4:8623356-8623375	None:intergenic	45.0%
	ATAGTTCGAGACACTTGCAG+AGG	-	chr7.4:8622570-8622589	MS.gene007396:CDS	45.0%
	CAACCAAGGTCGATAGAAGT+GGG	-	chr7.4:8623192-8623211	MS.gene007396:CDS	45.0%
	CACTTCTATCGACCTTGGTT+GGG	+	chr7.4:8623193-8623212	None:intergenic	45.0%
	CATAGCCAAACATGTGACCT+TGG	+	chr7.4:8622737-8622756	None:intergenic	45.0%
	CCAATAACAAACCGACCAGA+TGG	+	chr7.4:8623071-8623090	None:intergenic	45.0%
	CTCATAGTTCACAGTAGCCT+TGG	+	chr7.4:8622547-8622566	None:intergenic	45.0%
	CTGCAAACATGCATCAAGGA+TGG	+	chr7.4:8622448-8622467	None:intergenic	45.0%
	CTTGCTGCAAACATGCATCA+AGG	+	chr7.4:8622452-8622471	None:intergenic	45.0%
	GATATCGCTCAAGGAGTTCA+TGG	-	chr7.4:8622672-8622691	MS.gene007396:CDS	45.0%
	GGATGATCCTGATTTCACCT+GGG	-	chr7.4:8623487-8623506	MS.gene007396:CDS	45.0%
	GGATTCGTATCAGCTGATGT+TGG	-	chr7.4:8622597-8622616	MS.gene007396:CDS	45.0%
	GTAGCAAGCACATGAGTAAG+TGG	+	chr7.4:8622786-8622805	None:intergenic	45.0%
	TAGCTCAGGTGTTTCATCTG+TGG	+	chr7.4:8622760-8622779	None:intergenic	45.0%
	TATTGACACCTATGGTGGCT+GGG	-	chr7.4:8623133-8623152	MS.gene007396:CDS	45.0%
	TCAAAAGAGGTGGCAACTTC+AGG	-	chr7.4:8623429-8623448	MS.gene007396:CDS	45.0%
	TCCATCTCAATCCATCTGGT+CGG	-	chr7.4:8623057-8623076	MS.gene007396:CDS	45.0%
	TGAACTCCTTGAGCGATATC+AGG	+	chr7.4:8622672-8622691	None:intergenic	45.0%
	TGAGTAAGTGGCATTAGCTC+AGG	+	chr7.4:8622774-8622793	None:intergenic	45.0%
	TTATTGACACCTATGGTGGC+TGG	-	chr7.4:8623132-8623151	MS.gene007396:CDS	45.0%
!	ACTGCTGCATATGGCCATTT+TGG	-	chr7.4:8623461-8623480	MS.gene007396:CDS	45.0%
!	CCAAAAGTGTGGTAGCTTCA+GGG	-	chr7.4:8623237-8623256	MS.gene007396:CDS	45.0%
!	TGAAGTTGCCACCTCTTTTG+AGG	+	chr7.4:8623430-8623449	None:intergenic	45.0%
!!	CCATCTGGTCGGTTTGTTAT+TGG	-	chr7.4:8623068-8623087	MS.gene007396:CDS	45.0%
!!	CTGCATATGGCCATTTTGGA+CGG	-	chr7.4:8623465-8623484	MS.gene007396:CDS	45.0%
!!	TCTGGTCGGTTTGTTATTGG+TGG	-	chr7.4:8623071-8623090	MS.gene007396:CDS	45.0%
!!	TGACAGATTCTGAGGTGAAG+AGG	+	chr7.4:8622383-8622402	None:intergenic	45.0%
!!	TGCATATGGCCATTTTGGAC+GGG	-	chr7.4:8623466-8623485	MS.gene007396:CDS	45.0%
	ACAGTCTCCCAGGTGAAATC+AGG	+	chr7.4:8623497-8623516	None:intergenic	50.0%
	ACCTGATCACACAGCTTGTC+GGG	+	chr7.4:8622417-8622436	None:intergenic	50.0%
	AGATGAGGACAGTGTGCACA+CGG	+	chr7.4:8622929-8622948	None:intergenic	50.0%
	ATTGACACCTATGGTGGCTG+GGG	-	chr7.4:8623134-8623153	MS.gene007396:CDS	50.0%
	CAGAGTCCTGATATCGCTCA+AGG	-	chr7.4:8622663-8622682	MS.gene007396:CDS	50.0%
	CAGGATCATCCCGTCCAAAA+TGG	+	chr7.4:8623478-8623497	None:intergenic	50.0%
	CCAACCAAGGTCGATAGAAG+TGG	-	chr7.4:8623191-8623210	MS.gene007396:CDS	50.0%
	CCACTTCTATCGACCTTGGT+TGG	+	chr7.4:8623194-8623213	None:intergenic	50.0%
	CGAGACACTTGCAGAGGAAT+TGG	-	chr7.4:8622576-8622595	MS.gene007396:CDS	50.0%
	GAGTATCTTGACAGTCTCCC+AGG	+	chr7.4:8623507-8623526	None:intergenic	50.0%
	GCAGCAAGACCCAGAAAGTA+AGG	-	chr7.4:8622464-8622483	MS.gene007396:CDS	50.0%
	GGGATGATCCTGATTTCACC+TGG	-	chr7.4:8623486-8623505	MS.gene007396:CDS	50.0%
	GGTGACCAAGGTCACATGTT+TGG	-	chr7.4:8622729-8622748	MS.gene007396:CDS	50.0%
	TAGGCAAGCAGCCAAAAGTG+TGG	-	chr7.4:8623226-8623245	MS.gene007396:CDS	50.0%
	TCACCAGCACCAATTTCCTC+TGG	+	chr7.4:8622714-8622733	None:intergenic	50.0%
	TGCAAGACGTTGCATTGTGC+AGG	-	chr7.4:8623262-8623281	MS.gene007396:CDS	50.0%
!	CATCGTGCTGAGTTGAGATG+AGG	+	chr7.4:8622944-8622963	None:intergenic	50.0%
!	CCCTGAAGCTACCACACTTT+TGG	+	chr7.4:8623240-8623259	None:intergenic	50.0%
!	GCCAAAAGTGTGGTAGCTTC+AGG	-	chr7.4:8623236-8623255	MS.gene007396:CDS	50.0%
!	GGCCATATGCAGCAGTCTTT+TGG	+	chr7.4:8623457-8623476	None:intergenic	50.0%
!!	ACCGACCAGATGGATTGAGA+TGG	+	chr7.4:8623061-8623080	None:intergenic	50.0%
!!	GAAATTGGTGCTGGTGACCA+AGG	-	chr7.4:8622717-8622736	MS.gene007396:CDS	50.0%
!!!	GAGCATTTTGACTTCAGGCC+AGG	-	chr7.4:8623383-8623402	MS.gene007396:CDS	50.0%
	AGGACAGTGTGCACACGGAT+TGG	+	chr7.4:8622924-8622943	None:intergenic	55.0%
	CATGGAGATGCAGGACTCAC+TGG	-	chr7.4:8623098-8623117	MS.gene007396:CDS	55.0%
	CCTGATCACACAGCTTGTCG+GGG	+	chr7.4:8622416-8622435	None:intergenic	55.0%
	GAGATGCAGGACTCACTGGT+AGG	-	chr7.4:8623102-8623121	MS.gene007396:CDS	55.0%
	GGACAGTGTGCACACGGATT+GGG	+	chr7.4:8622923-8622942	None:intergenic	55.0%
	GTGAGTCCTGCATCTCCATG+AGG	+	chr7.4:8623098-8623117	None:intergenic	55.0%
	TGCCCCACTTCTATCGACCT+TGG	+	chr7.4:8623198-8623217	None:intergenic	55.0%
	ATGAGCACCCCAGCCACCAT+AGG	+	chr7.4:8623144-8623163	None:intergenic	60.0%
	CCCCGACAAGCTGTGTGATC+AGG	-	chr7.4:8622413-8622432	MS.gene007396:CDS	60.0%
	CTCTGGCAAGGACCCAACCA+AGG	-	chr7.4:8623178-8623197	MS.gene007396:CDS	60.0%
	GGTGGACCTCATGGAGATGC+AGG	-	chr7.4:8623089-8623108	MS.gene007396:CDS	60.0%
	GGTTGGGTCCTTGCCAGAGA+AGG	+	chr7.4:8623177-8623196	None:intergenic	60.0%
	TGCGCATGGCTTAGGCCTGA+TGG	-	chr7.4:8622849-8622868	MS.gene007396:CDS	60.0%
!	TATGGTGGCTGGGGTGCTCA+TGG	-	chr7.4:8623143-8623162	MS.gene007396:CDS	60.0%
!!	AGGAGGTGCCTTCTCTGGCA+AGG	-	chr7.4:8623166-8623185	MS.gene007396:CDS	60.0%
!!	CATGGAGGAGGTGCCTTCTC+TGG	-	chr7.4:8623161-8623180	MS.gene007396:CDS	60.0%
!	GGCTGGGGTGCTCATGGAGG+AGG	-	chr7.4:8623149-8623168	MS.gene007396:CDS	70.0%
!	GGTGGCTGGGGTGCTCATGG+AGG	-	chr7.4:8623146-8623165	MS.gene007396:CDS	70.0%

Chromosome	Type	Strat	End	Strand	Name
chr7.4	gene	8622369	8623541	8622369	ID=MS.gene007396
chr7.4	mRNA	8622369	8623541	8622369	ID=MS.gene007396.t1;Parent=MS.gene007396
chr7.4	exon	8622369	8623541	8622369	ID=MS.gene007396.t1.exon1;Parent=MS.gene007396.t1
chr7.4	CDS	8622369	8623541	8622369	ID=cds.MS.gene007396.t1;Parent=MS.gene007396.t1

Gene Sequence

>MS.gene007396

ATGGAAACTTTCCTCTTCACCTCAGAATCTGTCAACGAAGGTCACCCCGACAAGCTGTGTGATCAGGTTTCAGATGCCATCCTTGATGCATGTTTGCAGCAAGACCCAGAAAGTAAGGTTGCATGTGAGACATGTACAAAGACTAACATGGTTATGGTCTTTGGTGAGATAACAACCAAGGCTACTGTGAACTATGAGAAAATAGTTCGAGACACTTGCAGAGGAATTGGATTCGTATCAGCTGATGTTGGTCTTGATGCTGATAACTGCAAAGTTCTTGTCAACATTGAGCAACAGAGTCCTGATATCGCTCAAGGAGTTCATGGTCACTTGACCAAAAAACCAGAGGAAATTGGTGCTGGTGACCAAGGTCACATGTTTGGCTATGCCACAGATGAAACACCTGAGCTAATGCCACTTACTCATGTGCTTGCTACTAAACTCGGTGCAAAGCTCACTGAAGTTAGAAAGAACAAAACATGCGCATGGCTTAGGCCTGATGGTAAAACCCAAGTTACTGTTGAGTACCAAAATGATAACGGAGCTATGGTCCCAATCCGTGTGCACACTGTCCTCATCTCAACTCAGCACGATGAAACTGTCACAAATGAAAAAATTGCTGCAGATTTAAAAGAGCATGTGATTAAACCTGTTATCCCAGCAAAATACCTTGATGACAAGACTATCTTCCATCTCAATCCATCTGGTCGGTTTGTTATTGGTGGACCTCATGGAGATGCAGGACTCACTGGTAGGAAGATCATTATTGACACCTATGGTGGCTGGGGTGCTCATGGAGGAGGTGCCTTCTCTGGCAAGGACCCAACCAAGGTCGATAGAAGTGGGGCATATATTGTTAGGCAAGCAGCCAAAAGTGTGGTAGCTTCAGGGCTTGCAAGACGTTGCATTGTGCAGGTTTCTTATGCAATTGGAGTCCCAGAGCCACTTTCTGTATTTGTTGACACATACAAAACAGGAAAAATTCCAGACAAGGACATCTTGGTTCTTATTAAAGAGCATTTTGACTTCAGGCCAGGAATGATTTCCAATAATCTTGACCTCAAAAGAGGTGGCAACTTCAGGTACCAAAAGACTGCTGCATATGGCCATTTTGGACGGGATGATCCTGATTTCACCTGGGAGACTGTCAAGATACTCAAGCCAAAGGCTTGA

Protein sequence

>MS.gene007396.t1

METFLFTSESVNEGHPDKLCDQVSDAILDACLQQDPESKVACETCTKTNMVMVFGEITTKATVNYEKIVRDTCRGIGFVSADVGLDADNCKVLVNIEQQSPDIAQGVHGHLTKKPEEIGAGDQGHMFGYATDETPELMPLTHVLATKLGAKLTEVRKNKTCAWLRPDGKTQVTVEYQNDNGAMVPIRVHTVLISTQHDETVTNEKIAADLKEHVIKPVIPAKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYIVRQAAKSVVASGLARRCIVQVSYAIGVPEPLSVFVDTYKTGKIPDKDILVLIKEHFDFRPGMISNNLDLKRGGNFRYQKTAAYGHFGRDDPDFTWETVKILKPKA