Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene28853.t1 | XP_003626035.1 | 100 | 394 | 0 | 0 | 1 | 394 | 1 | 394 | 1.20E-231 | 812 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene28853.t1 | A4PU48 | 100.0 | 394 | 0 | 0 | 1 | 394 | 1 | 394 | 2.9e-234 | 812.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene28853.t1 | G7KUJ1 | 100.0 | 394 | 0 | 0 | 1 | 394 | 1 | 394 | 8.8e-232 | 812.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049149 | MS.gene28853 | -0.879268 | 1.43E-69 | -1.69E-46 |
| MS.gene049150 | MS.gene28853 | -0.834261 | 3.32E-56 | -1.69E-46 |
| MS.gene049153 | MS.gene28853 | -0.834441 | 2.99E-56 | -1.69E-46 |
| MS.gene049170 | MS.gene28853 | -0.838206 | 3.30E-57 | -1.69E-46 |
| MS.gene049378 | MS.gene28853 | -0.822428 | 2.38E-53 | -1.69E-46 |
| MS.gene049400 | MS.gene28853 | 0.80113 | 1.04E-48 | -1.69E-46 |
| MS.gene049758 | MS.gene28853 | -0.821626 | 3.65E-53 | -1.69E-46 |
| MS.gene049910 | MS.gene28853 | -0.836474 | 9.16E-57 | -1.69E-46 |
| MS.gene049993 | MS.gene28853 | -0.851853 | 6.77E-61 | -1.69E-46 |
| MS.gene050060 | MS.gene28853 | -0.808458 | 3.07E-50 | -1.69E-46 |
| MS.gene050133 | MS.gene28853 | 0.831632 | 1.50E-55 | -1.69E-46 |
| MS.gene050227 | MS.gene28853 | -0.815392 | 9.47E-52 | -1.69E-46 |
| MS.gene050228 | MS.gene28853 | -0.80291 | 4.48E-49 | -1.69E-46 |
| MS.gene050330 | MS.gene28853 | 0.81407 | 1.86E-51 | -1.69E-46 |
| MS.gene050397 | MS.gene28853 | -0.832987 | 6.91E-56 | -1.69E-46 |
| MS.gene050406 | MS.gene28853 | -0.819413 | 1.18E-52 | -1.69E-46 |
| MS.gene050426 | MS.gene28853 | 0.960959 | 3.77E-119 | -1.69E-46 |
| MS.gene050464 | MS.gene28853 | -0.868347 | 6.98E-66 | -1.69E-46 |
| MS.gene050529 | MS.gene28853 | -0.866947 | 1.96E-65 | -1.69E-46 |
| MS.gene050623 | MS.gene28853 | 0.824336 | 8.53E-54 | -1.69E-46 |
| MS.gene050642 | MS.gene28853 | -0.879003 | 1.78E-69 | -1.69E-46 |
| MS.gene050670 | MS.gene28853 | -0.855702 | 5.28E-62 | -1.69E-46 |
| MS.gene050820 | MS.gene28853 | -0.819859 | 9.31E-53 | -1.69E-46 |
| MS.gene050971 | MS.gene28853 | -0.829966 | 3.83E-55 | -1.69E-46 |
| MS.gene05119 | MS.gene28853 | 0.808498 | 3.01E-50 | -1.69E-46 |
| MS.gene051525 | MS.gene28853 | -0.86856 | 5.96E-66 | -1.69E-46 |
| MS.gene051582 | MS.gene28853 | -0.81518 | 1.06E-51 | -1.69E-46 |
| MS.gene051860 | MS.gene28853 | -0.853102 | 2.98E-61 | -1.69E-46 |
| MS.gene051983 | MS.gene28853 | -0.905457 | 4.21E-80 | -1.69E-46 |
| MS.gene052011 | MS.gene28853 | 0.910839 | 1.19E-82 | -1.69E-46 |
| MS.gene052077 | MS.gene28853 | -0.911638 | 4.85E-83 | -1.69E-46 |
| MS.gene052128 | MS.gene28853 | 0.823855 | 1.11E-53 | -1.69E-46 |
| MS.gene052134 | MS.gene28853 | -0.839675 | 1.38E-57 | -1.69E-46 |
| MS.gene052135 | MS.gene28853 | -0.847075 | 1.45E-59 | -1.69E-46 |
| MS.gene052176 | MS.gene28853 | -0.810098 | 1.36E-50 | -1.69E-46 |
| MS.gene052188 | MS.gene28853 | -0.836661 | 8.21E-57 | -1.69E-46 |
| MS.gene052253 | MS.gene28853 | -0.864454 | 1.20E-64 | -1.69E-46 |
| MS.gene052309 | MS.gene28853 | 0.812 | 5.28E-51 | -1.69E-46 |
| MS.gene052310 | MS.gene28853 | -0.801589 | 8.39E-49 | -1.69E-46 |
| MS.gene052340 | MS.gene28853 | -0.856808 | 2.51E-62 | -1.69E-46 |
| MS.gene052389 | MS.gene28853 | -0.80808 | 3.69E-50 | -1.69E-46 |
| MS.gene052469 | MS.gene28853 | -0.835386 | 1.73E-56 | -1.69E-46 |
| MS.gene052590 | MS.gene28853 | -0.80741 | 5.13E-50 | -1.69E-46 |
| MS.gene053176 | MS.gene28853 | -0.844996 | 5.35E-59 | -1.69E-46 |
| MS.gene053330 | MS.gene28853 | -0.84112 | 5.76E-58 | -1.69E-46 |
| MS.gene053494 | MS.gene28853 | -0.80928 | 2.05E-50 | -1.69E-46 |
| MS.gene053557 | MS.gene28853 | -0.80949 | 1.84E-50 | -1.69E-46 |
| MS.gene053836 | MS.gene28853 | -0.845976 | 2.90E-59 | -1.69E-46 |
| MS.gene053928 | MS.gene28853 | -0.805047 | 1.61E-49 | -1.69E-46 |
| MS.gene054102 | MS.gene28853 | -0.800551 | 1.37E-48 | -1.69E-46 |
| MS.gene054183 | MS.gene28853 | -0.886531 | 3.15E-72 | -1.69E-46 |
| MS.gene054349 | MS.gene28853 | -0.856773 | 2.56E-62 | -1.69E-46 |
| MS.gene054548 | MS.gene28853 | -0.825657 | 4.16E-54 | -1.69E-46 |
| MS.gene054556 | MS.gene28853 | -0.820541 | 6.49E-53 | -1.69E-46 |
| MS.gene054719 | MS.gene28853 | -0.833242 | 5.97E-56 | -1.69E-46 |
| MS.gene054918 | MS.gene28853 | -0.808434 | 3.10E-50 | -1.69E-46 |
| MS.gene054930 | MS.gene28853 | -0.82498 | 6.02E-54 | -1.69E-46 |
| MS.gene054983 | MS.gene28853 | -0.849543 | 3.02E-60 | -1.69E-46 |
| MS.gene055116 | MS.gene28853 | -0.842252 | 2.90E-58 | -1.69E-46 |
| MS.gene055217 | MS.gene28853 | -0.807549 | 4.79E-50 | -1.69E-46 |
| MS.gene055369 | MS.gene28853 | -0.818912 | 1.53E-52 | -1.69E-46 |
| MS.gene055370 | MS.gene28853 | -0.805263 | 1.45E-49 | -1.69E-46 |
| MS.gene055539 | MS.gene28853 | -0.807557 | 4.77E-50 | -1.69E-46 |
| MS.gene05553 | MS.gene28853 | -0.88329 | 5.08E-71 | -1.69E-46 |
| MS.gene05556 | MS.gene28853 | -0.841045 | 6.03E-58 | -1.69E-46 |
| MS.gene055601 | MS.gene28853 | 0.826137 | 3.20E-54 | -1.69E-46 |
| MS.gene055604 | MS.gene28853 | -0.806889 | 6.61E-50 | -1.69E-46 |
| MS.gene055701 | MS.gene28853 | -0.818561 | 1.84E-52 | -1.69E-46 |
| MS.gene056087 | MS.gene28853 | -0.817645 | 2.96E-52 | -1.69E-46 |
| MS.gene056233 | MS.gene28853 | -0.81536 | 9.62E-52 | -1.69E-46 |
| MS.gene056297 | MS.gene28853 | -0.801341 | 9.43E-49 | -1.69E-46 |
| MS.gene056330 | MS.gene28853 | 0.803016 | 4.26E-49 | -1.69E-46 |
| MS.gene056447 | MS.gene28853 | -0.815867 | 7.42E-52 | -1.69E-46 |
| MS.gene056612 | MS.gene28853 | -0.814606 | 1.41E-51 | -1.69E-46 |
| MS.gene056633 | MS.gene28853 | -0.81134 | 7.35E-51 | -1.69E-46 |
| MS.gene056659 | MS.gene28853 | -0.832155 | 1.11E-55 | -1.69E-46 |
| MS.gene056723 | MS.gene28853 | -0.876196 | 1.69E-68 | -1.69E-46 |
| MS.gene056899 | MS.gene28853 | 0.868106 | 8.35E-66 | -1.69E-46 |
| MS.gene056979 | MS.gene28853 | -0.89111 | 5.35E-74 | -1.69E-46 |
| MS.gene05702 | MS.gene28853 | -0.820425 | 6.91E-53 | -1.69E-46 |
| MS.gene057121 | MS.gene28853 | -0.820919 | 5.32E-53 | -1.69E-46 |
| MS.gene057124 | MS.gene28853 | -0.808224 | 3.44E-50 | -1.69E-46 |
| MS.gene057396 | MS.gene28853 | -0.856359 | 3.39E-62 | -1.69E-46 |
| MS.gene057476 | MS.gene28853 | -0.82576 | 3.93E-54 | -1.69E-46 |
| MS.gene057749 | MS.gene28853 | -0.809572 | 1.77E-50 | -1.69E-46 |
| MS.gene057823 | MS.gene28853 | -0.803647 | 3.15E-49 | -1.69E-46 |
| MS.gene058002 | MS.gene28853 | -0.830878 | 2.29E-55 | -1.69E-46 |
| MS.gene05811 | MS.gene28853 | -0.830173 | 3.41E-55 | -1.69E-46 |
| MS.gene058139 | MS.gene28853 | -0.831963 | 1.24E-55 | -1.69E-46 |
| MS.gene058142 | MS.gene28853 | -0.864597 | 1.08E-64 | -1.69E-46 |
| MS.gene058233 | MS.gene28853 | -0.808438 | 3.10E-50 | -1.69E-46 |
| MS.gene058276 | MS.gene28853 | -0.831493 | 1.62E-55 | -1.69E-46 |
| MS.gene058376 | MS.gene28853 | -0.80671 | 7.21E-50 | -1.69E-46 |
| MS.gene058444 | MS.gene28853 | -0.811695 | 6.16E-51 | -1.69E-46 |
| MS.gene058710 | MS.gene28853 | -0.863153 | 3.05E-64 | -1.69E-46 |
| MS.gene05886 | MS.gene28853 | -0.813904 | 2.02E-51 | -1.69E-46 |
| MS.gene058928 | MS.gene28853 | -0.804031 | 2.63E-49 | -1.69E-46 |
| MS.gene059011 | MS.gene28853 | -0.822693 | 2.07E-53 | -1.69E-46 |
| MS.gene05907 | MS.gene28853 | -0.827812 | 1.27E-54 | -1.69E-46 |
| MS.gene059247 | MS.gene28853 | -0.858229 | 9.51E-63 | -1.69E-46 |
| MS.gene059285 | MS.gene28853 | -0.869755 | 2.44E-66 | -1.69E-46 |
| MS.gene059294 | MS.gene28853 | -0.811262 | 7.64E-51 | -1.69E-46 |
| MS.gene059420 | MS.gene28853 | -0.883241 | 5.30E-71 | -1.69E-46 |
| MS.gene059462 | MS.gene28853 | -0.816656 | 4.94E-52 | -1.69E-46 |
| MS.gene059511 | MS.gene28853 | -0.817791 | 2.75E-52 | -1.69E-46 |
| MS.gene059609 | MS.gene28853 | -0.81122 | 7.81E-51 | -1.69E-46 |
| MS.gene059688 | MS.gene28853 | -0.80182 | 7.52E-49 | -1.69E-46 |
| MS.gene05984 | MS.gene28853 | -0.869127 | 3.91E-66 | -1.69E-46 |
| MS.gene059894 | MS.gene28853 | -0.812403 | 4.32E-51 | -1.69E-46 |
| MS.gene060247 | MS.gene28853 | -0.810224 | 1.28E-50 | -1.69E-46 |
| MS.gene060403 | MS.gene28853 | -0.81725 | 3.64E-52 | -1.69E-46 |
| MS.gene060986 | MS.gene28853 | -0.807541 | 4.81E-50 | -1.69E-46 |
| MS.gene061049 | MS.gene28853 | -0.853353 | 2.53E-61 | -1.69E-46 |
| MS.gene061114 | MS.gene28853 | 0.869192 | 3.72E-66 | -1.69E-46 |
| MS.gene061154 | MS.gene28853 | -0.86061 | 1.83E-63 | -1.69E-46 |
| MS.gene061159 | MS.gene28853 | -0.827477 | 1.53E-54 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene039012 | MS.gene28853 | PPI |
| MS.gene033949 | MS.gene28853 | PPI |
| MS.gene029766 | MS.gene28853 | PPI |
| MS.gene007396 | MS.gene28853 | PPI |
| MS.gene28853 | MS.gene98513 | PPI |
| MS.gene072659 | MS.gene28853 | PPI |
| MS.gene050426 | MS.gene28853 | PPI |
| MS.gene77617 | MS.gene28853 | PPI |
| MS.gene28853 | MS.gene051433 | PPI |
| MS.gene062025 | MS.gene28853 | PPI |
| MS.gene28853 | MS.gene76794 | PPI |
| MS.gene28853 | MS.gene92155 | PPI |
| MS.gene035022 | MS.gene28853 | PPI |
| MS.gene28853 | MS.gene073967 | PPI |
| MS.gene28853 | MS.gene34159 | PPI |
| MS.gene020646 | MS.gene28853 | PPI |
| MS.gene007550 | MS.gene28853 | PPI |
| MS.gene033950 | MS.gene28853 | PPI |
| MS.gene47449 | MS.gene28853 | PPI |
| MS.gene28651 | MS.gene28853 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene28853.t1 | MTR_7g110310 | 100.000 | 394 | 0 | 0 | 1 | 394 | 1 | 394 | 0.0 | 818 |
| MS.gene28853.t1 | MTR_2g046710 | 93.573 | 389 | 25 | 0 | 3 | 391 | 4 | 392 | 0.0 | 739 |
| MS.gene28853.t1 | MTR_4g123810 | 92.821 | 390 | 28 | 0 | 2 | 391 | 3 | 392 | 0.0 | 738 |
| MS.gene28853.t1 | MTR_7g102120 | 88.860 | 386 | 43 | 0 | 3 | 388 | 2 | 387 | 0.0 | 704 |
| MS.gene28853.t1 | MTR_1g063060 | 86.788 | 386 | 51 | 0 | 3 | 388 | 2 | 387 | 0.0 | 694 |
| MS.gene28853.t1 | MTR_1g063060 | 86.788 | 386 | 51 | 0 | 3 | 388 | 20 | 405 | 0.0 | 694 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene28853.t1 | AT4G01850 | 92.347 | 392 | 30 | 0 | 3 | 394 | 2 | 393 | 0.0 | 745 |
| MS.gene28853.t1 | AT4G01850 | 92.347 | 392 | 30 | 0 | 3 | 394 | 2 | 393 | 0.0 | 745 |
| MS.gene28853.t1 | AT1G02500 | 92.857 | 392 | 28 | 0 | 3 | 394 | 2 | 393 | 0.0 | 744 |
| MS.gene28853.t1 | AT1G02500 | 92.857 | 392 | 28 | 0 | 3 | 394 | 2 | 393 | 0.0 | 744 |
| MS.gene28853.t1 | AT3G17390 | 92.347 | 392 | 30 | 0 | 3 | 394 | 2 | 393 | 0.0 | 732 |
| MS.gene28853.t1 | AT2G36880 | 88.860 | 386 | 43 | 0 | 3 | 388 | 2 | 387 | 0.0 | 701 |
| MS.gene28853.t1 | AT2G36880 | 88.860 | 386 | 43 | 0 | 3 | 388 | 2 | 387 | 0.0 | 701 |
Find 141 sgRNAs with CRISPR-Local
Find 140 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCTCTTAAGGTCCAAGTTTA+TGG | 0.138584 | 7.4:+5378223 | None:intergenic |
| TTTCTTAAGACAGCTGCTTA+TGG | 0.284960 | 7.4:-5378185 | MS.gene28853:CDS |
| TGGGTCAAAGGCATCAATTC+AGG | 0.288293 | 7.4:+5378866 | None:intergenic |
| AAGATTATCATTGATACTTA+TGG | 0.306222 | 7.4:-5378512 | MS.gene28853:CDS |
| CCTTCTGGCCGCTTTGTCAT+TGG | 0.311751 | 7.4:-5378569 | MS.gene28853:CDS |
| ATCTGGTCGCACAGCTTGTC+GGG | 0.316863 | 7.4:+5379223 | None:intergenic |
| CATTGATACTTATGGTGGTT+GGG | 0.317021 | 7.4:-5378504 | MS.gene28853:CDS |
| CTCATAGTCTACGTTGGCCT+TGG | 0.319902 | 7.4:+5379093 | None:intergenic |
| ACTAACATGGTCATGGTCTT+TGG | 0.325220 | 7.4:-5379127 | MS.gene28853:CDS |
| ATCTTCCACCTTAACCCTTC+TGG | 0.339546 | 7.4:-5378584 | MS.gene28853:CDS |
| ATCAATGATAATCTTTCTTC+CGG | 0.346977 | 7.4:+5378520 | None:intergenic |
| TCACAGGCAACCTTGCTGTC+AGG | 0.350803 | 7.4:+5379163 | None:intergenic |
| CCAGATTGCTGCTGATCTTA+AGG | 0.357337 | 7.4:-5378657 | MS.gene28853:CDS |
| CCACTTCTGTCAACCTTGGT+TGG | 0.360492 | 7.4:+5378446 | None:intergenic |
| TGCTGTTGCCACCCCTCTTA+AGG | 0.364997 | 7.4:+5378210 | None:intergenic |
| CACTTCTGTCAACCTTGGTT+GGG | 0.374639 | 7.4:+5378447 | None:intergenic |
| AAGTACTTCTCGGGAATAAC+AGG | 0.381664 | 7.4:+5378620 | None:intergenic |
| CATGTCCTTGCAACCAAACT+TGG | 0.385708 | 7.4:-5378845 | MS.gene28853:CDS |
| GATATTGCTCAAGGTGTTCA+TGG | 0.389561 | 7.4:-5378965 | MS.gene28853:CDS |
| TCAGTCTTTGTTGACAGTTA+TGG | 0.391107 | 7.4:-5378320 | MS.gene28853:CDS |
| AAGTTTATGGTGATCATTCC+AGG | 0.391766 | 7.4:+5378236 | None:intergenic |
| CCATAAACTTGGACCTTAAG+AGG | 0.398540 | 7.4:-5378223 | MS.gene28853:CDS |
| CACGGTGGAGGTGCCTTCTC+AGG | 0.402997 | 7.4:-5378476 | MS.gene28853:CDS |
| GGAGGTTGGTGCTGGTGACC+AGG | 0.407279 | 7.4:-5378921 | MS.gene28853:CDS |
| CTTCTCATCCAAGTACTTCT+CGG | 0.410892 | 7.4:+5378610 | None:intergenic |
| GATCTGGTCGCACAGCTTGT+CGG | 0.416769 | 7.4:+5379222 | None:intergenic |
| AGGACAGTGTGGACACGAAC+TGG | 0.417997 | 7.4:+5378716 | None:intergenic |
| TTTGTTGACAGTTATGGAAC+TGG | 0.419936 | 7.4:-5378314 | MS.gene28853:CDS |
| GGTTGGGGTGCTCACGGTGG+AGG | 0.425538 | 7.4:-5378488 | MS.gene28853:CDS |
| GGTGACCAGGGTCACATGTT+TGG | 0.425995 | 7.4:-5378908 | MS.gene28853:CDS |
| ACCAACCTCCTCCGGTCGCT+TGG | 0.426190 | 7.4:+5378934 | None:intergenic |
| GGTTGGGTCCTTTCCTGAGA+AGG | 0.428342 | 7.4:+5378463 | None:intergenic |
| CAAAGCGGCCAGAAGGGTTA+AGG | 0.434307 | 7.4:+5378576 | None:intergenic |
| TGTTATTCCCGAGAAGTACT+TGG | 0.435100 | 7.4:-5378618 | MS.gene28853:CDS |
| CAAGTTTGGTTGCAAGGACA+TGG | 0.438358 | 7.4:+5378846 | None:intergenic |
| TCATTGATACTTATGGTGGT+TGG | 0.441161 | 7.4:-5378505 | MS.gene28853:CDS |
| TGAACACCTTGAGCAATATC+AGG | 0.445358 | 7.4:+5378968 | None:intergenic |
| ACAACTTCCCATGTGAAGTC+AGG | 0.445873 | 7.4:+5378143 | None:intergenic |
| GAGAATTTCGACTTCAGACC+TGG | 0.446842 | 7.4:-5378254 | MS.gene28853:CDS |
| CCTTAAGATCAGCAGCAATC+TGG | 0.458047 | 7.4:+5378657 | None:intergenic |
| TCTGGCCGCTTTGTCATTGG+TGG | 0.458127 | 7.4:-5378566 | MS.gene28853:CDS |
| GACCAAGACCTTGCATTTGT+CGG | 0.464752 | 7.4:+5379009 | None:intergenic |
| GTAACTTGTGTCTTGCCGTC+AGG | 0.465566 | 7.4:+5378773 | None:intergenic |
| GGTAAGACGAGAACCAAGTT+TGG | 0.467187 | 7.4:+5378832 | None:intergenic |
| CGACCGGAGGAGGTTGGTGC+TGG | 0.472165 | 7.4:-5378929 | MS.gene28853:CDS |
| ACAAAGACTGACAAAGGTTC+AGG | 0.472926 | 7.4:+5378332 | None:intergenic |
| CACAGGCAACCTTGCTGTCA+GGG | 0.473889 | 7.4:+5379164 | None:intergenic |
| TGCCGACAAATGCAAGGTCT+TGG | 0.476488 | 7.4:-5379011 | MS.gene28853:CDS |
| GAGGTTGGTGCTGGTGACCA+GGG | 0.476524 | 7.4:-5378920 | MS.gene28853:CDS |
| CGAGCACTGCATCAGAGATC+TGG | 0.482726 | 7.4:+5379206 | None:intergenic |
| ATTTGAAGAATCTCCCTGTC+AGG | 0.484553 | 7.4:+5378284 | None:intergenic |
| CTGCTTATGGACACTTTGGA+AGG | 0.487231 | 7.4:-5378172 | MS.gene28853:CDS |
| AATCTTTCTTCCGGTGAGAC+CGG | 0.488645 | 7.4:+5378529 | None:intergenic |
| CTTACCGAGGTTAGGAAGAA+TGG | 0.494148 | 7.4:-5378815 | MS.gene28853:CDS |
| CGTGACACATGCCGCACCAT+TGG | 0.494516 | 7.4:-5379061 | MS.gene28853:CDS |
| ACAGCTGCTTATGGACACTT+TGG | 0.494709 | 7.4:-5378176 | MS.gene28853:CDS |
| TGGAATGATCACCATAAACT+TGG | 0.495635 | 7.4:-5378234 | MS.gene28853:CDS |
| GGATTCATCTCTGATGATGT+TGG | 0.496804 | 7.4:-5379040 | MS.gene28853:CDS |
| TTCTCATCCAAGTACTTCTC+GGG | 0.498601 | 7.4:+5378611 | None:intergenic |
| TTAAGAGGGGTGGCAACAGC+AGG | 0.499577 | 7.4:-5378208 | MS.gene28853:CDS |
| TGATTCAGATGTAAATAGAA+AGG | 0.500218 | 7.4:+5379261 | None:intergenic |
| TCACCAGCACCAACCTCCTC+CGG | 0.500381 | 7.4:+5378926 | None:intergenic |
| GGGTCAAAGGCATCAATTCA+GGG | 0.504436 | 7.4:+5378867 | None:intergenic |
| GTTCTCGTCTTACCGAGGTT+AGG | 0.505425 | 7.4:-5378823 | MS.gene28853:CDS |
| GGAAGAATGGTACCTGCGCT+TGG | 0.516977 | 7.4:-5378802 | MS.gene28853:CDS |
| TATGGTGGTTGGGGTGCTCA+CGG | 0.517736 | 7.4:-5378494 | MS.gene28853:CDS |
| ATTGATACTTATGGTGGTTG+GGG | 0.520128 | 7.4:-5378503 | MS.gene28853:CDS |
| GCTCGACGCTTGTCTTGAGC+AGG | 0.520666 | 7.4:-5379188 | MS.gene28853:CDS |
| GGTGAGACCGGCATCACCAT+GGG | 0.521562 | 7.4:+5378541 | None:intergenic |
| GAAGTGGTGCCTATGTTGTA+AGG | 0.524030 | 7.4:-5378430 | MS.gene28853:CDS |
| AGTCTTGGTGCATGTCTCAC+AGG | 0.525417 | 7.4:+5379147 | None:intergenic |
| TGAGGCTTCTCCCACTTGAG+TGG | 0.529340 | 7.4:+5378116 | None:intergenic |
| CATGGTGATGCCGGTCTCAC+CGG | 0.530989 | 7.4:-5378539 | MS.gene28853:CDS |
| CTTCACCAAGCGACCGGAGG+AGG | 0.532058 | 7.4:-5378939 | MS.gene28853:CDS |
| GTTCAAGTTTCATACGCCAT+TGG | 0.533659 | 7.4:-5378359 | MS.gene28853:CDS |
| ACCGTTGGCCACGATACTCT+TGG | 0.534046 | 7.4:+5378400 | None:intergenic |
| CAACACAATTCTTAAGCTTG+AGG | 0.534059 | 7.4:+5378098 | None:intergenic |
| GGTGGTCCCCATGGTGATGC+CGG | 0.534409 | 7.4:-5378548 | MS.gene28853:CDS |
| GGGATGATCCTGACTTCACA+TGG | 0.535224 | 7.4:-5378151 | MS.gene28853:CDS |
| TGGTGCCTATGTTGTAAGGC+AGG | 0.539064 | 7.4:-5378426 | MS.gene28853:CDS |
| GACCATGACCATGTTAGTCT+TGG | 0.539549 | 7.4:+5379132 | None:intergenic |
| CCAATGACAAAGCGGCCAGA+AGG | 0.541172 | 7.4:+5378569 | None:intergenic |
| ACCAAGCGACCGGAGGAGGT+TGG | 0.554338 | 7.4:-5378935 | MS.gene28853:CDS |
| GTTGCAAGGACATGGGTCAA+AGG | 0.556162 | 7.4:+5378854 | None:intergenic |
| TGGACACTTCACCAAGCGAC+CGG | 0.560904 | 7.4:-5378945 | MS.gene28853:CDS |
| GGCACCACTTCTGTCAACCT+TGG | 0.561156 | 7.4:+5378442 | None:intergenic |
| CATAAACTTGGACCTTAAGA+GGG | 0.561791 | 7.4:-5378222 | MS.gene28853:CDS |
| GAACTGGAAAGATTCCTGAC+AGG | 0.562498 | 7.4:-5378298 | MS.gene28853:CDS |
| CTACAATGAGAACGGTGCTA+TGG | 0.563792 | 7.4:-5378741 | MS.gene28853:CDS |
| TTTGTCATTGGTGGTCCCCA+TGG | 0.564647 | 7.4:-5378557 | MS.gene28853:CDS |
| CGGTGAGACCGGCATCACCA+TGG | 0.572738 | 7.4:+5378540 | None:intergenic |
| GGCCGCCTGCCTTACAACAT+AGG | 0.573580 | 7.4:+5378421 | None:intergenic |
| CGTCATGTTGAGTAGAAATG+AGG | 0.574772 | 7.4:+5378696 | None:intergenic |
| GGAGATTCTTCAAATTGTGA+AGG | 0.577415 | 7.4:-5378276 | MS.gene28853:CDS |
| ATTATCATTGATACTTATGG+TGG | 0.577853 | 7.4:-5378509 | MS.gene28853:CDS |
| CAATGACAAAGCGGCCAGAA+GGG | 0.582473 | 7.4:+5378570 | None:intergenic |
| GTCAGGTCTCAACCAAGCGC+AGG | 0.588779 | 7.4:+5378790 | None:intergenic |
| GAGAACCAAGTTTGGTTGCA+AGG | 0.599192 | 7.4:+5378840 | None:intergenic |
| AACTTGGACCTTAAGAGGGG+TGG | 0.600140 | 7.4:-5378218 | MS.gene28853:CDS |
| CAGAGTCCTGATATTGCTCA+AGG | 0.600493 | 7.4:-5378974 | MS.gene28853:CDS |
| TGCTTATGGACACTTTGGAA+GGG | 0.601939 | 7.4:-5378171 | MS.gene28853:CDS |
| GCCAAGAGTATCGTGGCCAA+CGG | 0.604104 | 7.4:-5378401 | MS.gene28853:CDS |
| AAGTTGTGAAACCACTCAAG+TGG | 0.610837 | 7.4:-5378127 | MS.gene28853:CDS |
| CCAACCAAGGTTGACAGAAG+TGG | 0.610892 | 7.4:-5378446 | MS.gene28853:CDS |
| GCATCGGCGAGCAAGACCGT+TGG | 0.612896 | 7.4:+5378385 | None:intergenic |
| TGGAGGTGCCTTCTCAGGAA+AGG | 0.616557 | 7.4:-5378471 | MS.gene28853:CDS |
| AAGTTTGGTTGCAAGGACAT+GGG | 0.617157 | 7.4:+5378847 | None:intergenic |
| TGCCTATGTTGTAAGGCAGG+CGG | 0.619125 | 7.4:-5378423 | MS.gene28853:CDS |
| TGAGCAGGACCCTGACAGCA+AGG | 0.623817 | 7.4:-5379173 | MS.gene28853:CDS |
| AGCGGCCAGAAGGGTTAAGG+TGG | 0.629636 | 7.4:+5378579 | None:intergenic |
| CTGTCAACAAAGACTGACAA+AGG | 0.630556 | 7.4:+5378326 | None:intergenic |
| TCTGGTCGCACAGCTTGTCG+GGG | 0.635896 | 7.4:+5379224 | None:intergenic |
| GTTCTCATTGTAGTACTCGA+TGG | 0.637222 | 7.4:+5378751 | None:intergenic |
| CAAAGGTTCAGGCACACCAA+TGG | 0.637977 | 7.4:+5378343 | None:intergenic |
| CACCAAGACTAACATGGTCA+TGG | 0.639561 | 7.4:-5379134 | MS.gene28853:CDS |
| TCTTGATGCCGACAAATGCA+AGG | 0.639773 | 7.4:-5379017 | MS.gene28853:CDS |
| AACTGGAAAGATTCCTGACA+GGG | 0.640690 | 7.4:-5378297 | MS.gene28853:CDS |
| ATCATCAGAGATGAATCCAA+TGG | 0.640935 | 7.4:+5379045 | None:intergenic |
| GGTGGTTGGGGTGCTCACGG+TGG | 0.644744 | 7.4:-5378491 | MS.gene28853:CDS |
| AGTTGTGAAACCACTCAAGT+GGG | 0.645098 | 7.4:-5378126 | MS.gene28853:CDS |
| ATCGAGTACTACAATGAGAA+CGG | 0.645228 | 7.4:-5378749 | MS.gene28853:CDS |
| ATGAAACTTGAACAATGCAT+CGG | 0.645309 | 7.4:+5378369 | None:intergenic |
| TACATCTGAATCAGTGAACG+AGG | 0.649849 | 7.4:-5379251 | MS.gene28853:CDS |
| CTCAGGAAAGGACCCAACCA+AGG | 0.650893 | 7.4:-5378459 | MS.gene28853:CDS |
| ACTTGGTTCTCGTCTTACCG+AGG | 0.654033 | 7.4:-5378828 | MS.gene28853:CDS |
| CAGAGATGAATCCAATGGTG+CGG | 0.655738 | 7.4:+5379050 | None:intergenic |
| CATAACCAAACATGTGACCC+TGG | 0.656715 | 7.4:+5378903 | None:intergenic |
| GGTCAAAGGCATCAATTCAG+GGG | 0.658957 | 7.4:+5378868 | None:intergenic |
| TGCGCTTGGTTGAGACCTGA+CGG | 0.663059 | 7.4:-5378788 | MS.gene28853:CDS |
| GGTACCATTCTTCCTAACCT+CGG | 0.672851 | 7.4:+5378811 | None:intergenic |
| GATCTTCTCATAGTCTACGT+TGG | 0.675200 | 7.4:+5379087 | None:intergenic |
| ACACTTCACCAAGCGACCGG+AGG | 0.687239 | 7.4:-5378942 | MS.gene28853:CDS |
| GGGGACCACCAATGACAAAG+CGG | 0.696729 | 7.4:+5378561 | None:intergenic |
| GGATGATCCTGACTTCACAT+GGG | 0.698633 | 7.4:-5378150 | MS.gene28853:CDS |
| GCAGGCGGCCAAGAGTATCG+TGG | 0.699100 | 7.4:-5378408 | MS.gene28853:CDS |
| CTTTGGAGAAATAACAACCA+AGG | 0.702532 | 7.4:-5379110 | MS.gene28853:CDS |
| ATAAACTTGGACCTTAAGAG+GGG | 0.707857 | 7.4:-5378221 | MS.gene28853:CDS |
| GTGAGACCGGCATCACCATG+GGG | 0.708643 | 7.4:+5378542 | None:intergenic |
| ACATCTGAATCAGTGAACGA+GGG | 0.713919 | 7.4:-5379250 | MS.gene28853:CDS |
| GACATGCACCAAGACTAACA+TGG | 0.727763 | 7.4:-5379140 | MS.gene28853:CDS |
| GAGTAGAAATGAGGACAGTG+TGG | 0.744359 | 7.4:+5378705 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAGATTATCATTGATACTTA+TGG | - | chr7.4:5378868-5378887 | MS.gene28853:CDS | 20.0% |
| ! | ATCAATGATAATCTTTCTTC+CGG | + | chr7.4:5378863-5378882 | None:intergenic | 25.0% |
| ! | ATTATCATTGATACTTATGG+TGG | - | chr7.4:5378871-5378890 | MS.gene28853:CDS | 25.0% |
| ! | TGATTCAGATGTAAATAGAA+AGG | + | chr7.4:5378122-5378141 | None:intergenic | 25.0% |
| ATGAAACTTGAACAATGCAT+CGG | + | chr7.4:5379014-5379033 | None:intergenic | 30.0% | |
| AAGTTTATGGTGATCATTCC+AGG | + | chr7.4:5379147-5379166 | None:intergenic | 35.0% | |
| ATAAACTTGGACCTTAAGAG+GGG | - | chr7.4:5379159-5379178 | MS.gene28853:CDS | 35.0% | |
| ATCATCAGAGATGAATCCAA+TGG | + | chr7.4:5378338-5378357 | None:intergenic | 35.0% | |
| ATCGAGTACTACAATGAGAA+CGG | - | chr7.4:5378631-5378650 | MS.gene28853:CDS | 35.0% | |
| ATTGATACTTATGGTGGTTG+GGG | - | chr7.4:5378877-5378896 | MS.gene28853:CDS | 35.0% | |
| CATAAACTTGGACCTTAAGA+GGG | - | chr7.4:5379158-5379177 | MS.gene28853:CDS | 35.0% | |
| CATTGATACTTATGGTGGTT+GGG | - | chr7.4:5378876-5378895 | MS.gene28853:CDS | 35.0% | |
| GGAGATTCTTCAAATTGTGA+AGG | - | chr7.4:5379104-5379123 | MS.gene28853:CDS | 35.0% | |
| TCAGTCTTTGTTGACAGTTA+TGG | - | chr7.4:5379060-5379079 | MS.gene28853:CDS | 35.0% | |
| TCATTGATACTTATGGTGGT+TGG | - | chr7.4:5378875-5378894 | MS.gene28853:CDS | 35.0% | |
| TGGAATGATCACCATAAACT+TGG | - | chr7.4:5379146-5379165 | MS.gene28853:CDS | 35.0% | |
| TTTCTTAAGACAGCTGCTTA+TGG | - | chr7.4:5379195-5379214 | MS.gene28853:CDS | 35.0% | |
| TTTGTTGACAGTTATGGAAC+TGG | - | chr7.4:5379066-5379085 | MS.gene28853:CDS | 35.0% | |
| ! | CTTTGGAGAAATAACAACCA+AGG | - | chr7.4:5378270-5378289 | MS.gene28853:CDS | 35.0% |
| AACTGGAAAGATTCCTGACA+GGG | - | chr7.4:5379083-5379102 | MS.gene28853:CDS | 40.0% | |
| AAGTACTTCTCGGGAATAAC+AGG | + | chr7.4:5378763-5378782 | None:intergenic | 40.0% | |
| AAGTTGTGAAACCACTCAAG+TGG | - | chr7.4:5379253-5379272 | MS.gene28853:CDS | 40.0% | |
| AAGTTTGGTTGCAAGGACAT+GGG | + | chr7.4:5378536-5378555 | None:intergenic | 40.0% | |
| ACAAAGACTGACAAAGGTTC+AGG | + | chr7.4:5379051-5379070 | None:intergenic | 40.0% | |
| ACATCTGAATCAGTGAACGA+GGG | - | chr7.4:5378130-5378149 | MS.gene28853:CDS | 40.0% | |
| ACTAACATGGTCATGGTCTT+TGG | - | chr7.4:5378253-5378272 | MS.gene28853:CDS | 40.0% | |
| AGTTGTGAAACCACTCAAGT+GGG | - | chr7.4:5379254-5379273 | MS.gene28853:CDS | 40.0% | |
| ATTTGAAGAATCTCCCTGTC+AGG | + | chr7.4:5379099-5379118 | None:intergenic | 40.0% | |
| CCATAAACTTGGACCTTAAG+AGG | - | chr7.4:5379157-5379176 | MS.gene28853:CDS | 40.0% | |
| CCTCTTAAGGTCCAAGTTTA+TGG | + | chr7.4:5379160-5379179 | None:intergenic | 40.0% | |
| CGTCATGTTGAGTAGAAATG+AGG | + | chr7.4:5378687-5378706 | None:intergenic | 40.0% | |
| CTGTCAACAAAGACTGACAA+AGG | + | chr7.4:5379057-5379076 | None:intergenic | 40.0% | |
| CTTCTCATCCAAGTACTTCT+CGG | + | chr7.4:5378773-5378792 | None:intergenic | 40.0% | |
| GATCTTCTCATAGTCTACGT+TGG | + | chr7.4:5378296-5378315 | None:intergenic | 40.0% | |
| GTTCTCATTGTAGTACTCGA+TGG | + | chr7.4:5378632-5378651 | None:intergenic | 40.0% | |
| TACATCTGAATCAGTGAACG+AGG | - | chr7.4:5378129-5378148 | MS.gene28853:CDS | 40.0% | |
| TGAACACCTTGAGCAATATC+AGG | + | chr7.4:5378415-5378434 | None:intergenic | 40.0% | |
| TTCTCATCCAAGTACTTCTC+GGG | + | chr7.4:5378772-5378791 | None:intergenic | 40.0% | |
| ! | GATATTGCTCAAGGTGTTCA+TGG | - | chr7.4:5378415-5378434 | MS.gene28853:CDS | 40.0% |
| ! | GGATTCATCTCTGATGATGT+TGG | - | chr7.4:5378340-5378359 | MS.gene28853:CDS | 40.0% |
| ! | GTTCAAGTTTCATACGCCAT+TGG | - | chr7.4:5379021-5379040 | MS.gene28853:CDS | 40.0% |
| ! | TGCTTATGGACACTTTGGAA+GGG | - | chr7.4:5379209-5379228 | MS.gene28853:CDS | 40.0% |
| !! | TGTTATTCCCGAGAAGTACT+TGG | - | chr7.4:5378762-5378781 | MS.gene28853:CDS | 40.0% |
| AATCTTTCTTCCGGTGAGAC+CGG | + | chr7.4:5378854-5378873 | None:intergenic | 45.0% | |
| ACAACTTCCCATGTGAAGTC+AGG | + | chr7.4:5379240-5379259 | None:intergenic | 45.0% | |
| ACAGCTGCTTATGGACACTT+TGG | - | chr7.4:5379204-5379223 | MS.gene28853:CDS | 45.0% | |
| ATCTTCCACCTTAACCCTTC+TGG | - | chr7.4:5378796-5378815 | MS.gene28853:CDS | 45.0% | |
| CAAGTTTGGTTGCAAGGACA+TGG | + | chr7.4:5378537-5378556 | None:intergenic | 45.0% | |
| CACCAAGACTAACATGGTCA+TGG | - | chr7.4:5378246-5378265 | MS.gene28853:CDS | 45.0% | |
| CACTTCTGTCAACCTTGGTT+GGG | + | chr7.4:5378936-5378955 | None:intergenic | 45.0% | |
| CAGAGATGAATCCAATGGTG+CGG | + | chr7.4:5378333-5378352 | None:intergenic | 45.0% | |
| CAGAGTCCTGATATTGCTCA+AGG | - | chr7.4:5378406-5378425 | MS.gene28853:CDS | 45.0% | |
| CATAACCAAACATGTGACCC+TGG | + | chr7.4:5378480-5378499 | None:intergenic | 45.0% | |
| CATGTCCTTGCAACCAAACT+TGG | - | chr7.4:5378535-5378554 | MS.gene28853:CDS | 45.0% | |
| CCAGATTGCTGCTGATCTTA+AGG | - | chr7.4:5378723-5378742 | MS.gene28853:CDS | 45.0% | |
| CCTTAAGATCAGCAGCAATC+TGG | + | chr7.4:5378726-5378745 | None:intergenic | 45.0% | |
| CTGCTTATGGACACTTTGGA+AGG | - | chr7.4:5379208-5379227 | MS.gene28853:CDS | 45.0% | |
| CTTACCGAGGTTAGGAAGAA+TGG | - | chr7.4:5378565-5378584 | MS.gene28853:CDS | 45.0% | |
| GAACTGGAAAGATTCCTGAC+AGG | - | chr7.4:5379082-5379101 | MS.gene28853:CDS | 45.0% | |
| GAAGTGGTGCCTATGTTGTA+AGG | - | chr7.4:5378950-5378969 | MS.gene28853:CDS | 45.0% | |
| GACATGCACCAAGACTAACA+TGG | - | chr7.4:5378240-5378259 | MS.gene28853:CDS | 45.0% | |
| GACCAAGACCTTGCATTTGT+CGG | + | chr7.4:5378374-5378393 | None:intergenic | 45.0% | |
| GAGAACCAAGTTTGGTTGCA+AGG | + | chr7.4:5378543-5378562 | None:intergenic | 45.0% | |
| GAGAATTTCGACTTCAGACC+TGG | - | chr7.4:5379126-5379145 | MS.gene28853:CDS | 45.0% | |
| GAGTAGAAATGAGGACAGTG+TGG | + | chr7.4:5378678-5378697 | None:intergenic | 45.0% | |
| GGATGATCCTGACTTCACAT+GGG | - | chr7.4:5379230-5379249 | MS.gene28853:CDS | 45.0% | |
| GGTAAGACGAGAACCAAGTT+TGG | + | chr7.4:5378551-5378570 | None:intergenic | 45.0% | |
| GGTACCATTCTTCCTAACCT+CGG | + | chr7.4:5378572-5378591 | None:intergenic | 45.0% | |
| TCTTGATGCCGACAAATGCA+AGG | - | chr7.4:5378363-5378382 | MS.gene28853:CDS | 45.0% | |
| ! | CTACAATGAGAACGGTGCTA+TGG | - | chr7.4:5378639-5378658 | MS.gene28853:CDS | 45.0% |
| ! | GACCATGACCATGTTAGTCT+TGG | + | chr7.4:5378251-5378270 | None:intergenic | 45.0% |
| !! | GGGTCAAAGGCATCAATTCA+GGG | + | chr7.4:5378516-5378535 | None:intergenic | 45.0% |
| !! | GGTCAAAGGCATCAATTCAG+GGG | + | chr7.4:5378515-5378534 | None:intergenic | 45.0% |
| !! | TGGGTCAAAGGCATCAATTC+AGG | + | chr7.4:5378517-5378536 | None:intergenic | 45.0% |
| AACTTGGACCTTAAGAGGGG+TGG | - | chr7.4:5379162-5379181 | MS.gene28853:CDS | 50.0% | |
| CAAAGGTTCAGGCACACCAA+TGG | + | chr7.4:5379040-5379059 | None:intergenic | 50.0% | |
| CAATGACAAAGCGGCCAGAA+GGG | + | chr7.4:5378813-5378832 | None:intergenic | 50.0% | |
| CCAACCAAGGTTGACAGAAG+TGG | - | chr7.4:5378934-5378953 | MS.gene28853:CDS | 50.0% | |
| CCACTTCTGTCAACCTTGGT+TGG | + | chr7.4:5378937-5378956 | None:intergenic | 50.0% | |
| GGGATGATCCTGACTTCACA+TGG | - | chr7.4:5379229-5379248 | MS.gene28853:CDS | 50.0% | |
| GTTCTCGTCTTACCGAGGTT+AGG | - | chr7.4:5378557-5378576 | MS.gene28853:CDS | 50.0% | |
| GTTGCAAGGACATGGGTCAA+AGG | + | chr7.4:5378529-5378548 | None:intergenic | 50.0% | |
| TGCCGACAAATGCAAGGTCT+TGG | - | chr7.4:5378369-5378388 | MS.gene28853:CDS | 50.0% | |
| TGCCTATGTTGTAAGGCAGG+CGG | - | chr7.4:5378957-5378976 | MS.gene28853:CDS | 50.0% | |
| TGGTGCCTATGTTGTAAGGC+AGG | - | chr7.4:5378954-5378973 | MS.gene28853:CDS | 50.0% | |
| ! | ACTTGGTTCTCGTCTTACCG+AGG | - | chr7.4:5378552-5378571 | MS.gene28853:CDS | 50.0% |
| ! | AGTCTTGGTGCATGTCTCAC+AGG | + | chr7.4:5378236-5378255 | None:intergenic | 50.0% |
| ! | CTCATAGTCTACGTTGGCCT+TGG | + | chr7.4:5378290-5378309 | None:intergenic | 50.0% |
| ! | GTAACTTGTGTCTTGCCGTC+AGG | + | chr7.4:5378610-5378629 | None:intergenic | 50.0% |
| ! | TTTGTCATTGGTGGTCCCCA+TGG | - | chr7.4:5378823-5378842 | MS.gene28853:CDS | 50.0% |
| ACCGTTGGCCACGATACTCT+TGG | + | chr7.4:5378983-5379002 | None:intergenic | 55.0% | |
| AGGACAGTGTGGACACGAAC+TGG | + | chr7.4:5378667-5378686 | None:intergenic | 55.0% | |
| ATCTGGTCGCACAGCTTGTC+GGG | + | chr7.4:5378160-5378179 | None:intergenic | 55.0% | |
| CAAAGCGGCCAGAAGGGTTA+AGG | + | chr7.4:5378807-5378826 | None:intergenic | 55.0% | |
| CCAATGACAAAGCGGCCAGA+AGG | + | chr7.4:5378814-5378833 | None:intergenic | 55.0% | |
| CTCAGGAAAGGACCCAACCA+AGG | - | chr7.4:5378921-5378940 | MS.gene28853:CDS | 55.0% | |
| GATCTGGTCGCACAGCTTGT+CGG | + | chr7.4:5378161-5378180 | None:intergenic | 55.0% | |
| GGAAGAATGGTACCTGCGCT+TGG | - | chr7.4:5378578-5378597 | MS.gene28853:CDS | 55.0% | |
| GGCACCACTTCTGTCAACCT+TGG | + | chr7.4:5378941-5378960 | None:intergenic | 55.0% | |
| GGGGACCACCAATGACAAAG+CGG | + | chr7.4:5378822-5378841 | None:intergenic | 55.0% | |
| GGTGACCAGGGTCACATGTT+TGG | - | chr7.4:5378472-5378491 | MS.gene28853:CDS | 55.0% | |
| GGTTGGGTCCTTTCCTGAGA+AGG | + | chr7.4:5378920-5378939 | None:intergenic | 55.0% | |
| TGAGGCTTCTCCCACTTGAG+TGG | + | chr7.4:5379267-5379286 | None:intergenic | 55.0% | |
| TGCGCTTGGTTGAGACCTGA+CGG | - | chr7.4:5378592-5378611 | MS.gene28853:CDS | 55.0% | |
| TGCTGTTGCCACCCCTCTTA+AGG | + | chr7.4:5379173-5379192 | None:intergenic | 55.0% | |
| TGGACACTTCACCAAGCGAC+CGG | - | chr7.4:5378435-5378454 | MS.gene28853:CDS | 55.0% | |
| TTAAGAGGGGTGGCAACAGC+AGG | - | chr7.4:5379172-5379191 | MS.gene28853:CDS | 55.0% | |
| ! | CACAGGCAACCTTGCTGTCA+GGG | + | chr7.4:5378219-5378238 | None:intergenic | 55.0% |
| ! | CCTTCTGGCCGCTTTGTCAT+TGG | - | chr7.4:5378811-5378830 | MS.gene28853:CDS | 55.0% |
| ! | CGAGCACTGCATCAGAGATC+TGG | + | chr7.4:5378177-5378196 | None:intergenic | 55.0% |
| ! | TATGGTGGTTGGGGTGCTCA+CGG | - | chr7.4:5378886-5378905 | MS.gene28853:CDS | 55.0% |
| ! | TCACAGGCAACCTTGCTGTC+AGG | + | chr7.4:5378220-5378239 | None:intergenic | 55.0% |
| ! | TCTGGCCGCTTTGTCATTGG+TGG | - | chr7.4:5378814-5378833 | MS.gene28853:CDS | 55.0% |
| !! | GCCAAGAGTATCGTGGCCAA+CGG | - | chr7.4:5378979-5378998 | MS.gene28853:CDS | 55.0% |
| !! | TGGAGGTGCCTTCTCAGGAA+AGG | - | chr7.4:5378909-5378928 | MS.gene28853:CDS | 55.0% |
| ACACTTCACCAAGCGACCGG+AGG | - | chr7.4:5378438-5378457 | MS.gene28853:CDS | 60.0% | |
| AGCGGCCAGAAGGGTTAAGG+TGG | + | chr7.4:5378804-5378823 | None:intergenic | 60.0% | |
| CGTGACACATGCCGCACCAT+TGG | - | chr7.4:5378319-5378338 | MS.gene28853:CDS | 60.0% | |
| GCTCGACGCTTGTCTTGAGC+AGG | - | chr7.4:5378192-5378211 | MS.gene28853:CDS | 60.0% | |
| GGCCGCCTGCCTTACAACAT+AGG | + | chr7.4:5378962-5378981 | None:intergenic | 60.0% | |
| GGTGAGACCGGCATCACCAT+GGG | + | chr7.4:5378842-5378861 | None:intergenic | 60.0% | |
| GTCAGGTCTCAACCAAGCGC+AGG | + | chr7.4:5378593-5378612 | None:intergenic | 60.0% | |
| GTGAGACCGGCATCACCATG+GGG | + | chr7.4:5378841-5378860 | None:intergenic | 60.0% | |
| TCACCAGCACCAACCTCCTC+CGG | + | chr7.4:5378457-5378476 | None:intergenic | 60.0% | |
| TCTGGTCGCACAGCTTGTCG+GGG | + | chr7.4:5378159-5378178 | None:intergenic | 60.0% | |
| TGAGCAGGACCCTGACAGCA+AGG | - | chr7.4:5378207-5378226 | MS.gene28853:CDS | 60.0% | |
| ! | CATGGTGATGCCGGTCTCAC+CGG | - | chr7.4:5378841-5378860 | MS.gene28853:CDS | 60.0% |
| !! | GAGGTTGGTGCTGGTGACCA+GGG | - | chr7.4:5378460-5378479 | MS.gene28853:CDS | 60.0% |
| ACCAACCTCCTCCGGTCGCT+TGG | + | chr7.4:5378449-5378468 | None:intergenic | 65.0% | |
| ACCAAGCGACCGGAGGAGGT+TGG | - | chr7.4:5378445-5378464 | MS.gene28853:CDS | 65.0% | |
| CGGTGAGACCGGCATCACCA+TGG | + | chr7.4:5378843-5378862 | None:intergenic | 65.0% | |
| CTTCACCAAGCGACCGGAGG+AGG | - | chr7.4:5378441-5378460 | MS.gene28853:CDS | 65.0% | |
| ! | GCATCGGCGAGCAAGACCGT+TGG | + | chr7.4:5378998-5379017 | None:intergenic | 65.0% |
| ! | GGTGGTCCCCATGGTGATGC+CGG | - | chr7.4:5378832-5378851 | MS.gene28853:CDS | 65.0% |
| !! | CACGGTGGAGGTGCCTTCTC+AGG | - | chr7.4:5378904-5378923 | MS.gene28853:CDS | 65.0% |
| !! | GCAGGCGGCCAAGAGTATCG+TGG | - | chr7.4:5378972-5378991 | MS.gene28853:CDS | 65.0% |
| !! | GGAGGTTGGTGCTGGTGACC+AGG | - | chr7.4:5378459-5378478 | MS.gene28853:CDS | 65.0% |
| ! | GGTGGTTGGGGTGCTCACGG+TGG | - | chr7.4:5378889-5378908 | MS.gene28853:CDS | 70.0% |
| ! | GGTTGGGGTGCTCACGGTGG+AGG | - | chr7.4:5378892-5378911 | MS.gene28853:CDS | 70.0% |
| !! | CGACCGGAGGAGGTTGGTGC+TGG | - | chr7.4:5378451-5378470 | MS.gene28853:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.4 | gene | 5378109 | 5379293 | 5378109 | ID=MS.gene28853 |
| chr7.4 | mRNA | 5378109 | 5379293 | 5378109 | ID=MS.gene28853.t1;Parent=MS.gene28853 |
| chr7.4 | exon | 5378109 | 5379293 | 5378109 | ID=MS.gene28853.t1.exon1;Parent=MS.gene28853.t1 |
| chr7.4 | CDS | 5378109 | 5379293 | 5378109 | ID=cds.MS.gene28853.t1;Parent=MS.gene28853.t1 |
| Gene Sequence |
| Protein sequence |
