AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene007908

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene007908.t1 MTR_8g463140 99.444 180 1 0 1 180 1 180 5.44e-132 367
MS.gene007908.t1 MTR_2g078770 64.748 139 44 3 45 180 35 171 8.96e-52 164
MS.gene007908.t1 MTR_4g088555 69.231 91 28 0 56 146 54 144 4.40e-43 140
MS.gene007908.t1 MTR_7g110320 51.974 152 54 2 15 154 90 234 2.36e-38 139
MS.gene007908.t1 MTR_7g110320 51.974 152 54 2 15 154 90 234 2.73e-38 139
MS.gene007908.t1 MTR_7g092930 68.889 90 25 1 57 143 57 146 6.56e-38 133
MS.gene007908.t1 MTR_8g005960 68.041 97 30 1 55 150 177 273 1.48e-37 132
MS.gene007908.t1 MTR_2g014200 66.279 86 29 0 57 142 56 141 5.10e-37 125
MS.gene007908.t1 MTR_3g085180 69.512 82 25 0 63 144 163 244 6.50e-37 132
MS.gene007908.t1 MTR_1g086250 52.778 144 61 2 15 154 96 236 3.86e-36 133
MS.gene007908.t1 MTR_7g444860 65.591 93 32 0 57 149 141 233 5.03e-36 127
MS.gene007908.t1 MTR_1g053715 68.605 86 27 0 58 143 67 152 1.69e-35 127
MS.gene007908.t1 MTR_2g046550 72.500 80 22 0 65 144 139 218 4.62e-34 127
MS.gene007908.t1 MTR_1g035010 60.784 102 40 0 53 154 92 193 5.28e-34 127
MS.gene007908.t1 MTR_3g099080 65.385 78 27 0 65 142 98 175 5.05e-32 118
MS.gene007908.t1 MTR_7g028740 63.291 79 29 0 65 143 77 155 5.63e-32 118
MS.gene007908.t1 MTR_4g109770 65.476 84 28 1 65 147 123 206 7.59e-32 119
MS.gene007908.t1 MTR_8g080670 65.789 76 26 0 62 137 159 234 7.22e-31 115
MS.gene007908.t1 MTR_5g046670 67.105 76 25 0 63 138 242 317 7.73e-31 117
MS.gene007908.t1 MTR_8g096780 57.292 96 41 0 54 149 88 183 1.08e-30 115
MS.gene007908.t1 MTR_8g080690 63.750 80 29 0 63 142 149 228 1.95e-30 114
MS.gene007908.t1 MTR_2g461920 68.919 74 23 0 65 138 171 244 4.95e-30 115
MS.gene007908.t1 MTR_8g080680 63.636 77 28 0 62 138 129 205 8.22e-30 112
MS.gene007908.t1 MTR_2g020620 42.697 89 51 0 74 162 99 187 1.54e-16 77.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene007908.t1 AT3G15270 48.913 184 87 5 1 180 1 181 1.39e-42 140
MS.gene007908.t1 AT3G60030 50.649 154 71 1 6 154 63 216 6.85e-41 146
MS.gene007908.t1 AT1G53160 57.480 127 49 3 59 180 48 174 1.19e-39 133
MS.gene007908.t1 AT1G53160 57.480 127 49 3 59 180 48 174 1.19e-39 133
MS.gene007908.t1 AT1G53160 70.330 91 26 1 59 148 48 138 3.67e-39 131
MS.gene007908.t1 AT2G33810 66.667 87 29 0 56 142 45 131 8.50e-39 129
MS.gene007908.t1 AT1G02065 61.111 108 41 1 52 159 175 281 5.59e-37 130
MS.gene007908.t1 AT2G47070 50.000 142 66 2 33 173 78 215 4.18e-36 133
MS.gene007908.t1 AT2G42200 70.370 81 24 0 63 143 72 152 2.94e-34 124
MS.gene007908.t1 AT1G69170 71.053 76 22 0 63 138 122 197 5.42e-33 121
MS.gene007908.t1 AT1G20980 56.034 116 49 2 54 168 109 223 9.78e-33 123
MS.gene007908.t1 AT5G43270 64.706 85 30 0 63 147 167 251 3.27e-32 119
MS.gene007908.t1 AT5G43270 64.706 85 30 0 63 147 167 251 3.27e-32 119
MS.gene007908.t1 AT5G43270 64.706 85 30 0 63 147 167 251 3.27e-32 119
MS.gene007908.t1 AT3G57920 63.636 88 32 0 65 152 59 146 8.95e-32 117
MS.gene007908.t1 AT5G50670 62.500 80 30 0 63 142 99 178 1.33e-31 117
MS.gene007908.t1 AT5G50670 62.500 80 30 0 63 142 99 178 1.33e-31 117
MS.gene007908.t1 AT5G50570 62.500 80 30 0 63 142 99 178 1.33e-31 117
MS.gene007908.t1 AT5G50570 62.500 80 30 0 63 142 99 178 1.33e-31 117
MS.gene007908.t1 AT1G76580 68.750 80 25 0 63 142 112 191 4.91e-31 118
MS.gene007908.t1 AT1G76580 68.750 80 25 0 63 142 112 191 5.24e-31 118
MS.gene007908.t1 AT1G76580 68.750 80 25 0 63 142 112 191 8.63e-31 117
MS.gene007908.t1 AT1G27370 62.195 82 31 0 57 138 168 249 7.85e-30 112
MS.gene007908.t1 AT1G27360 57.000 100 37 1 49 142 159 258 1.02e-29 112
MS.gene007908.t1 AT1G27360 57.000 100 37 1 49 142 159 258 1.02e-29 112
MS.gene007908.t1 AT1G27360 57.000 100 37 1 49 142 159 258 1.02e-29 112
MS.gene007908.t1 AT1G27360 57.000 100 37 1 49 142 159 258 1.02e-29 112
MS.gene007908.t1 AT1G27370 62.195 82 31 0 57 138 168 249 2.48e-29 111
MS.gene007908.t1 AT1G27370 62.195 82 31 0 57 138 168 249 2.48e-29 111
MS.gene007908.t1 AT1G27370 62.195 82 31 0 57 138 168 249 2.48e-29 111
MS.gene007908.t1 AT1G27370 62.195 82 31 0 57 138 168 249 2.48e-29 111
MS.gene007908.t1 AT1G27370 62.195 82 31 0 57 138 168 249 2.48e-29 111
MS.gene007908.t1 AT1G27370 62.195 82 31 0 57 138 168 249 2.48e-29 111
MS.gene007908.t1 AT1G02065 70.492 61 18 0 52 112 175 235 8.30e-24 94.4
MS.gene007908.t1 AT2G47070 72.881 59 16 0 90 148 2 60 3.65e-23 95.9
MS.gene007908.t1 AT5G18830 42.017 119 62 2 20 138 100 211 1.56e-20 88.6
MS.gene007908.t1 AT5G18830 42.017 119 62 2 20 138 100 211 1.71e-20 88.2
MS.gene007908.t1 AT5G18830 42.017 119 62 2 20 138 100 211 1.88e-20 88.2

Find 66 sgRNAs with CRISPR-Local

Find 94 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTCCCTCATTGGCAGTTTC+CGG 0.104015 8.3:-47027311 None:intergenic
TTCCCTCATTGGCAGTTTCC+GGG 0.286723 8.3:-47027310 None:intergenic
ACACCTCTCTGCTTGGCAAC+AGG 0.310269 8.3:-47026521 None:intergenic
GCTGTGACTGCTTCCCTCAT+TGG 0.328447 8.3:-47027321 None:intergenic
ATGAACTTACCAGGCAGTTC+TGG 0.332336 8.3:+47027386 MS.gene007908:CDS
GCACCCGTTGTGGTGGTTGC+AGG 0.348317 8.3:+47026610 MS.gene007908:CDS
GGGGTCGGTGGCGGGAGAAG+AGG 0.366575 8.3:+47026475 MS.gene007908:CDS
AGCTGCCGCAGGCGGTTGGC+TGG 0.389734 8.3:+47027260 MS.gene007908:CDS
CTGAAGAAGAGAAGAAGAAA+GGG 0.392986 8.3:+47026455 MS.gene007908:CDS
TTAGCTTCATCTAATGTTGA+AGG 0.400420 8.3:-47027417 None:intergenic
CAACATGGTGGAAGAAGAAA+TGG 0.403464 8.3:+47026393 MS.gene007908:CDS
AGCCCTGCAACCACCACAAC+GGG 0.406005 8.3:-47026613 None:intergenic
TGGTTGCAGGGCTGAGGCAG+AGG 0.413422 8.3:+47026623 MS.gene007908:CDS
AGAAGAAAGGGGTCGGTGGC+GGG 0.418165 8.3:+47026467 MS.gene007908:CDS
GTCGGTGGCGGGAGAAGAGG+AGG 0.431374 8.3:+47026478 MS.gene007908:CDS
AAGAAGAAAGGGGTCGGTGG+CGG 0.439947 8.3:+47026466 MS.gene007908:CDS
CTCATTGGCAGTTTCCGGGT+TGG 0.441178 8.3:-47027306 None:intergenic
ATCCTGCATTGAGTTTCCTT+AGG 0.443576 8.3:-47027359 None:intergenic
GGCGGGAGAAGAGGAGGTGG+TGG 0.448247 8.3:+47026484 MS.gene007908:CDS
AAATGAAGTAGAAGAGGAGG+AGG 0.457054 8.3:+47026417 MS.gene007908:CDS
GGGAGAAGAGGAGGTGGTGG+CGG 0.468248 8.3:+47026487 MS.gene007908:CDS
CACCTCTCTGCTTGGCAACA+GGG 0.470728 8.3:-47026520 None:intergenic
AACCACCACAACGGGTGCCT+TGG 0.478730 8.3:-47026605 None:intergenic
CAGCTCCACACCTCTCTGCT+TGG 0.503571 8.3:-47026528 None:intergenic
AATGGAAAATGAAGTAGAAG+AGG 0.504373 8.3:+47026411 MS.gene007908:CDS
ACTGAAGAAGAGAAGAAGAA+AGG 0.514644 8.3:+47026454 MS.gene007908:CDS
AAGAAGCTGCCGCAGGCGGT+TGG 0.518296 8.3:+47027256 MS.gene007908:CDS
GGAAAATGAAGTAGAAGAGG+AGG 0.522072 8.3:+47026414 MS.gene007908:CDS
GAGGAAGAGAACATTGATGA+TGG 0.526926 8.3:+47026354 MS.gene007908:CDS
GGTGGCGGGAGAAGAGGAGG+TGG 0.533572 8.3:+47026481 MS.gene007908:CDS
TTGTGGTGGTTGCAGGGCTG+AGG 0.534426 8.3:+47026617 MS.gene007908:CDS
GCTGTGCAGGTTCCATGACT+TGG 0.541073 8.3:+47027214 MS.gene007908:intron
CACCCGTTGTGGTGGTTGCA+GGG 0.543935 8.3:+47026611 MS.gene007908:CDS
TTCCAAGGCACCCGTTGTGG+TGG 0.545459 8.3:+47026603 MS.gene007908:CDS
GAAGAGAAGAAGAAAGGGGT+CGG 0.545505 8.3:+47026460 MS.gene007908:CDS
TCATTCCAAGGCACCCGTTG+TGG 0.554790 8.3:+47026600 MS.gene007908:CDS
CTCACAAAACAATGGAAGCT+AGG 0.561345 8.3:+47026323 None:intergenic
AGTGTGTGAGTTTCATTCCA+AGG 0.564413 8.3:+47026588 MS.gene007908:CDS
CAACCCGGAAACTGCCAATG+AGG 0.564468 8.3:+47027307 MS.gene007908:CDS
GACTTATAACCAGAACTGCC+TGG 0.566906 8.3:-47027395 None:intergenic
CATCAAACTCTACCAAGTCA+TGG 0.569400 8.3:-47027226 None:intergenic
AACCTAAGGAAACTCAATGC+AGG 0.572114 8.3:+47027357 MS.gene007908:CDS
TGATGATGGAAAAGATGAGA+AGG 0.573354 8.3:+47026368 MS.gene007908:CDS
CTGGACACAATGAACGGCGC+CGG 0.573671 8.3:+47027279 MS.gene007908:CDS
TGTGTCCAGCCAACCGCCTG+CGG 0.577001 8.3:-47027265 None:intergenic
GAGGTGTGGAGCTGATTTGA+CGG 0.578847 8.3:+47026537 MS.gene007908:CDS
GAGAAGAAGAAAGGGGTCGG+TGG 0.581205 8.3:+47026463 MS.gene007908:CDS
ACGGCGCCGGAAAACCAACC+CGG 0.589104 8.3:+47027292 MS.gene007908:CDS
AGTCTAAAAGAAGCTGCCGC+AGG 0.602245 8.3:+47027249 MS.gene007908:CDS
AACCCGGAAACTGCCAATGA+GGG 0.603733 8.3:+47027308 MS.gene007908:CDS
CAAAGGACAACATCAACCTA+AGG 0.609316 8.3:+47027343 MS.gene007908:CDS
AATGAAGTAGAAGAGGAGGA+GGG 0.609345 8.3:+47026418 MS.gene007908:CDS
AGGATTCAGATGAACTTACC+AGG 0.609388 8.3:+47027377 MS.gene007908:CDS
TGTTGCCAAGCAGAGAGGTG+TGG 0.615642 8.3:+47026523 MS.gene007908:CDS
CTAAAAGAAGCTGCCGCAGG+CGG 0.624624 8.3:+47027252 MS.gene007908:CDS
GAGGGAAGCAGTCACAGCAA+AGG 0.634063 8.3:+47027326 MS.gene007908:CDS
CAGCCCTGCAACCACCACAA+CGG 0.634176 8.3:-47026614 None:intergenic
CACACACTTTATGACGGCGA+TGG 0.634301 8.3:-47026573 None:intergenic
GAAACTCACACACTTTATGA+CGG 0.636331 8.3:-47026579 None:intergenic
CACCCTGTTGCCAAGCAGAG+AGG 0.641872 8.3:+47026518 MS.gene007908:CDS
GGTTGGCTGGACACAATGAA+CGG 0.643542 8.3:+47027273 MS.gene007908:CDS
CTCTCTGCTTGGCAACAGGG+TGG 0.650434 8.3:-47026517 None:intergenic
TGAAGAAGAGAAGAAGAAAG+GGG 0.675275 8.3:+47026456 MS.gene007908:CDS
TGGAAGCTAGGAGTATTGAG+AGG 0.681882 8.3:+47026335 MS.gene007908:CDS
GATGAGAAGGAACAACATGG+TGG 0.695331 8.3:+47026381 MS.gene007908:CDS
AAAGATGAGAAGGAACAACA+TGG 0.732079 8.3:+47026378 MS.gene007908:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAGCAAACAAAAATAATTA+AGG + chr8.3:47026874-47026893 MS.gene007908:intron 15.0%
!! AAGCAAACAAAAATAATTAA+GGG + chr8.3:47026875-47026894 MS.gene007908:intron 15.0%
!! AAATCGAATGTTTCAAAAAT+TGG + chr8.3:47026797-47026816 MS.gene007908:intron 20.0%
!!! TATTCTTTTTGCAGAAATTT+AGG - chr8.3:47027132-47027151 None:intergenic 20.0%
!!! TTTTCTTTTGACATGTTTAT+AGG + chr8.3:47026719-47026738 MS.gene007908:intron 20.0%
! AAAACTGACCTTAAATATCT+TGG + chr8.3:47027085-47027104 MS.gene007908:intron 25.0%
! ATCTCAGTTATACAATAGTT+CGG - chr8.3:47026946-47026965 None:intergenic 25.0%
! CAAACAAAAATAATTAAGGG+AGG + chr8.3:47026878-47026897 MS.gene007908:intron 25.0%
!!! TTGAAGCAATGTTTTAAAAC+CGG - chr8.3:47027043-47027062 None:intergenic 25.0%
AATGGAAAATGAAGTAGAAG+AGG + chr8.3:47026411-47026430 MS.gene007908:CDS 30.0%
GAGCTAAAAAAACAGATCAT+GGG - chr8.3:47026766-47026785 None:intergenic 30.0%
TGAGCTAAAAAAACAGATCA+TGG - chr8.3:47026767-47026786 None:intergenic 30.0%
TTGATGAGTGTTAGAGAAAA+TGG - chr8.3:47026690-47026709 None:intergenic 30.0%
! CTGATTCAACCGATTTAAAT+GGG - chr8.3:47027010-47027029 None:intergenic 30.0%
! TCTGATTCAACCGATTTAAA+TGG - chr8.3:47027011-47027030 None:intergenic 30.0%
! TCTTTTGACATGTTTATAGG+TGG + chr8.3:47026722-47026741 MS.gene007908:intron 30.0%
AAAGATGAGAAGGAACAACA+TGG + chr8.3:47026378-47026397 MS.gene007908:CDS 35.0%
ACTGAAGAAGAGAAGAAGAA+AGG + chr8.3:47026454-47026473 MS.gene007908:CDS 35.0%
CCAAGTAAACGATAACCTTA+AGG - chr8.3:47026844-47026863 None:intergenic 35.0%
CCTTAAGGTTATCGTTTACT+TGG + chr8.3:47026841-47026860 MS.gene007908:intron 35.0%
CTGAAGAAGAGAAGAAGAAA+GGG + chr8.3:47026455-47026474 MS.gene007908:CDS 35.0%
GAAACTCACACACTTTATGA+CGG - chr8.3:47026582-47026601 None:intergenic 35.0%
GCTCTAGTCCAAGATATTTA+AGG - chr8.3:47027096-47027115 None:intergenic 35.0%
TATTAGACTGTGAGACCTTA+AGG + chr8.3:47026826-47026845 MS.gene007908:intron 35.0%
TGAAGAAGAGAAGAAGAAAG+GGG + chr8.3:47026456-47026475 MS.gene007908:CDS 35.0%
TTGAATCAGACACTTCAATC+CGG + chr8.3:47027021-47027040 MS.gene007908:intron 35.0%
! CAACCGATTTAAATGGGAAT+CGG - chr8.3:47027004-47027023 None:intergenic 35.0%
!! TGATGATGGAAAAGATGAGA+AGG + chr8.3:47026368-47026387 MS.gene007908:CDS 35.0%
AAATGAAGTAGAAGAGGAGG+AGG + chr8.3:47026417-47026436 MS.gene007908:CDS 40.0%
AACCTAAGGAAACTCAATGC+AGG + chr8.3:47027357-47027376 MS.gene007908:CDS 40.0%
AATGAAGTAGAAGAGGAGGA+GGG + chr8.3:47026418-47026437 MS.gene007908:CDS 40.0%
AGGATTCAGATGAACTTACC+AGG + chr8.3:47027377-47027396 MS.gene007908:CDS 40.0%
AGTGTGTGAGTTTCATTCCA+AGG + chr8.3:47026588-47026607 MS.gene007908:CDS 40.0%
ATCAGATCAGTCACTTCAAC+TGG + chr8.3:47026915-47026934 MS.gene007908:intron 40.0%
ATCCTGCATTGAGTTTCCTT+AGG - chr8.3:47027362-47027381 None:intergenic 40.0%
CAAAGGACAACATCAACCTA+AGG + chr8.3:47027343-47027362 MS.gene007908:CDS 40.0%
CATCAAACTCTACCAAGTCA+TGG - chr8.3:47027229-47027248 None:intergenic 40.0%
CGAATTTAATCCCGGCAAAT+TGG + chr8.3:47026978-47026997 MS.gene007908:intron 40.0%
GAGGAAGAGAACATTGATGA+TGG + chr8.3:47026354-47026373 MS.gene007908:CDS 40.0%
GGAAAATGAAGTAGAAGAGG+AGG + chr8.3:47026414-47026433 MS.gene007908:CDS 40.0%
TCAAGCAGCGAATTTAATCC+CGG + chr8.3:47026970-47026989 MS.gene007908:intron 40.0%
! CAACATGGTGGAAGAAGAAA+TGG + chr8.3:47026393-47026412 MS.gene007908:CDS 40.0%
! TGGCCGATTCCCATTTAAAT+CGG + chr8.3:47026998-47027017 MS.gene007908:intron 40.0%
!! GGTTTTGTCAACAATGTAGC+AGG + chr8.3:47026644-47026663 MS.gene007908:CDS 40.0%
ATGAACTTACCAGGCAGTTC+TGG + chr8.3:47027386-47027405 MS.gene007908:CDS 45.0%
GAAGAGAAGAAGAAAGGGGT+CGG + chr8.3:47026460-47026479 MS.gene007908:CDS 45.0%
GACTTATAACCAGAACTGCC+TGG - chr8.3:47027398-47027417 None:intergenic 45.0%
GATGAGAAGGAACAACATGG+TGG + chr8.3:47026381-47026400 MS.gene007908:CDS 45.0%
!! TGGAAGCTAGGAGTATTGAG+AGG + chr8.3:47026335-47026354 MS.gene007908:CDS 45.0%
AACCCGGAAACTGCCAATGA+GGG + chr8.3:47027308-47027327 MS.gene007908:CDS 50.0%
AACGACGAGTTATGCTGTGC+AGG + chr8.3:47027201-47027220 MS.gene007908:intron 50.0%
AGTCTAAAAGAAGCTGCCGC+AGG + chr8.3:47027249-47027268 MS.gene007908:CDS 50.0%
ATGGGAATCGGCCAATTTGC+CGG - chr8.3:47026992-47027011 None:intergenic 50.0%
CACACACTTTATGACGGCGA+TGG - chr8.3:47026576-47026595 None:intergenic 50.0%
CTTCCCTCATTGGCAGTTTC+CGG - chr8.3:47027314-47027333 None:intergenic 50.0%
TTCCCTCATTGGCAGTTTCC+GGG - chr8.3:47027313-47027332 None:intergenic 50.0%
! GGTTGGCTGGACACAATGAA+CGG + chr8.3:47027273-47027292 MS.gene007908:CDS 50.0%
!! GAGGTGTGGAGCTGATTTGA+CGG + chr8.3:47026537-47026556 MS.gene007908:CDS 50.0%
!!! CAGTTTCCGGGTTGGTTTTC+CGG - chr8.3:47027301-47027320 None:intergenic 50.0%
AAGAAGAAAGGGGTCGGTGG+CGG + chr8.3:47026466-47026485 MS.gene007908:CDS 55.0%
ACACCTCTCTGCTTGGCAAC+AGG - chr8.3:47026524-47026543 None:intergenic 55.0%
CAACCCGGAAACTGCCAATG+AGG + chr8.3:47027307-47027326 MS.gene007908:CDS 55.0%
CACCTCTCTGCTTGGCAACA+GGG - chr8.3:47026523-47026542 None:intergenic 55.0%
CTAAAAGAAGCTGCCGCAGG+CGG + chr8.3:47027252-47027271 MS.gene007908:CDS 55.0%
CTCATTGGCAGTTTCCGGGT+TGG - chr8.3:47027309-47027328 None:intergenic 55.0%
GAGAAGAAGAAAGGGGTCGG+TGG + chr8.3:47026463-47026482 MS.gene007908:CDS 55.0%
GAGGGAAGCAGTCACAGCAA+AGG + chr8.3:47027326-47027345 MS.gene007908:CDS 55.0%
GCTGTGACTGCTTCCCTCAT+TGG - chr8.3:47027324-47027343 None:intergenic 55.0%
GCTGTGCAGGTTCCATGACT+TGG + chr8.3:47027214-47027233 MS.gene007908:intron 55.0%
TGGGAATCGGCCAATTTGCC+GGG - chr8.3:47026991-47027010 None:intergenic 55.0%
TGTTGCCAAGCAGAGAGGTG+TGG + chr8.3:47026523-47026542 MS.gene007908:CDS 55.0%
! TCATTCCAAGGCACCCGTTG+TGG + chr8.3:47026600-47026619 MS.gene007908:CDS 55.0%
AACCACCACAACGGGTGCCT+TGG - chr8.3:47026608-47026627 None:intergenic 60.0%
AGAAGAAAGGGGTCGGTGGC+GGG + chr8.3:47026467-47026486 MS.gene007908:CDS 60.0%
AGCCCTGCAACCACCACAAC+GGG - chr8.3:47026616-47026635 None:intergenic 60.0%
CACCCGTTGTGGTGGTTGCA+GGG + chr8.3:47026611-47026630 MS.gene007908:CDS 60.0%
CACCCTGTTGCCAAGCAGAG+AGG + chr8.3:47026518-47026537 MS.gene007908:CDS 60.0%
CAGCCCTGCAACCACCACAA+CGG - chr8.3:47026617-47026636 None:intergenic 60.0%
CAGCTCCACACCTCTCTGCT+TGG - chr8.3:47026531-47026550 None:intergenic 60.0%
CTCTCTGCTTGGCAACAGGG+TGG - chr8.3:47026520-47026539 None:intergenic 60.0%
CTGGACACAATGAACGGCGC+CGG + chr8.3:47027279-47027298 MS.gene007908:CDS 60.0%
TTGTGGTGGTTGCAGGGCTG+AGG + chr8.3:47026617-47026636 MS.gene007908:CDS 60.0%
! TTCCAAGGCACCCGTTGTGG+TGG + chr8.3:47026603-47026622 MS.gene007908:CDS 60.0%
AAGAAGCTGCCGCAGGCGGT+TGG + chr8.3:47027256-47027275 MS.gene007908:CDS 65.0%
GCACCCGTTGTGGTGGTTGC+AGG + chr8.3:47026610-47026629 MS.gene007908:CDS 65.0%
TGGTTGCAGGGCTGAGGCAG+AGG + chr8.3:47026623-47026642 MS.gene007908:CDS 65.0%
TGTGTCCAGCCAACCGCCTG+CGG - chr8.3:47027268-47027287 None:intergenic 65.0%
! ACGGCGCCGGAAAACCAACC+CGG + chr8.3:47027292-47027311 MS.gene007908:CDS 65.0%
! GGGAGAAGAGGAGGTGGTGG+CGG + chr8.3:47026487-47026506 MS.gene007908:CDS 65.0%
GGCGGGAGAAGAGGAGGTGG+TGG + chr8.3:47026484-47026503 MS.gene007908:CDS 70.0%
!! GGTGGCGGGAGAAGAGGAGG+TGG + chr8.3:47026481-47026500 MS.gene007908:CDS 70.0%
!! GTCGGTGGCGGGAGAAGAGG+AGG + chr8.3:47026478-47026497 MS.gene007908:CDS 70.0%
AGCTGCCGCAGGCGGTTGGC+TGG + chr8.3:47027260-47027279 MS.gene007908:CDS 75.0%
!! GGGGTCGGTGGCGGGAGAAG+AGG + chr8.3:47026475-47026494 MS.gene007908:CDS 75.0%


Chromosome Type Strat End Strand Name
chr8.3 gene 47026334 47027433 47026334 ID=MS.gene007908
chr8.3 mRNA 47026334 47027433 47026334 ID=MS.gene007908.t1;Parent=MS.gene007908
chr8.3 exon 47026334 47026665 47026334 ID=MS.gene007908.t1.exon1;Parent=MS.gene007908.t1
chr8.3 CDS 47026334 47026665 47026334 ID=cds.MS.gene007908.t1;Parent=MS.gene007908.t1
chr8.3 exon 47027223 47027433 47027223 ID=MS.gene007908.t1.exon2;Parent=MS.gene007908.t1
chr8.3 CDS 47027223 47027433 47027223 ID=cds.MS.gene007908.t1;Parent=MS.gene007908.t1
Gene Sequence

>MS.gene007908

ATGGAAGCTAGGAGTATTGAGAGGAAGAGAACATTGATGATGGAAAAGATGAGAAGGAACAACATGGTGGAAGAAGAAATGGAAAATGAAGTAGAAGAGGAGGAGGGTGATGTTAGTCTGACTGAAGAAGAGAAGAAGAAAGGGGTCGGTGGCGGGAGAAGAGGAGGTGGTGGCGGTGTTTCTCCACCCTGTTGCCAAGCAGAGAGGTGTGGAGCTGATTTGACGGATGCAAAGAGATACCATCGCCGTCATAAAGTGTGTGAGTTTCATTCCAAGGCACCCGTTGTGGTGGTTGCAGGGCTGAGGCAGAGGTTTTGTCAACAATGTAGCAGGTCTTCAATCTTATATCTACACCATTTTCTCTAACACTCATCAATAATTTGTTTTTTCTTTTGACATGTTTATAGGTGGTAGAGTCTGTCATGTTTTCCCATGATCTGTTTTTTTAGCTCACATTTACATAAAATCGAATGTTTCAAAAATTGGACAAAATATTAGACTGTGAGACCTTAAGGTTATCGTTTACTTGGCTCAATTAGAAAAGCAAACAAAAATAATTAAGGGAGGCAAAAAAAATAAAAATCAGATCAGTCACTTCAACTGGTTTAACCGAACTATTGTATAACTGAGATTAAATCAAGCAGCGAATTTAATCCCGGCAAATTGGCCGATTCCCATTTAAATCGGTTGAATCAGACACTTCAATCCGGTTTTAAAACATTGCTTCAAACAATTATAATTTTATAAGTGAAAAACTGACCTTAAATATCTTGGACTAGAGCGTCATTTTCTCATCCTAAATTTCTGCAAAAAGAATAAACTATTCATTATTTCATATCATATACAAAGATATACTACGCATTGATCAACGACGAGTTATGCTGTGCAGGTTCCATGACTTGGTAGAGTTTGATGAGTCTAAAAGAAGCTGCCGCAGGCGGTTGGCTGGACACAATGAACGGCGCCGGAAAACCAACCCGGAAACTGCCAATGAGGGAAGCAGTCACAGCAAAGGACAACATCAACCTAAGGAAACTCAATGCAGGATTCAGATGAACTTACCAGGCAGTTCTGGTTATAAGTCCTTCAACATTAGATGA
Protein sequence

>MS.gene007908.t1

MEARSIERKRTLMMEKMRRNNMVEEEMENEVEEEEGDVSLTEEEKKKGVGGGRRGGGGGVSPPCCQAERCGADLTDAKRYHRRHKVCEFHSKAPVVVVAGLRQRFCQQCSRFHDLVEFDESKRSCRRRLAGHNERRRKTNPETANEGSSHSKGQHQPKETQCRIQMNLPGSSGYKSFNIR