AlfalfaGEDB | MS.gene36036

M. sativa cultivar XinJiangDaYe / MS.gene36036

KEGG: -
GO: GO:0003674 GO:0003676 GO:0003677 GO:0005488 GO:0005575 GO:0005634 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0097159 GO:0110165 GO:1901363
PFAM: PF03110.17

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene36036.t1	XP_013445497.1	98.3	115	2	0	66	180	66	180	1.30E-58	236.1

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene36036.t1	Q6Z461	75.0	80	20	0	66	145	111	190	1.1e-29	131.3

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene36036.t1	A0A072TRQ4	98.3	115	2	0	66	180	66	180	9.1e-59	236.1

TFs/TRs:

Gene ID	Type	Classification
MS.gene36036.t1	TF	SBP

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR
MS.gene051255	MS.gene36036	0.809783	1.59E-50	-1.69E-46
MS.gene051360	MS.gene36036	0.824611	7.35E-54	-1.69E-46
MS.gene052346	MS.gene36036	0.842157	3.07E-58	-1.69E-46
MS.gene052414	MS.gene36036	0.813915	2.01E-51	-1.69E-46
MS.gene052982	MS.gene36036	0.807487	4.93E-50	-1.69E-46
MS.gene052999	MS.gene36036	0.819647	1.04E-52	-1.69E-46
MS.gene053169	MS.gene36036	0.809193	2.14E-50	-1.69E-46
MS.gene053209	MS.gene36036	0.811653	6.29E-51	-1.69E-46
MS.gene054556	MS.gene36036	0.825089	5.67E-54	-1.69E-46
MS.gene05494	MS.gene36036	0.838169	3.37E-57	-1.69E-46
MS.gene055741	MS.gene36036	0.818767	1.65E-52	-1.69E-46
MS.gene055744	MS.gene36036	0.823179	1.59E-53	-1.69E-46
MS.gene057289	MS.gene36036	0.810039	1.41E-50	-1.69E-46
MS.gene058948	MS.gene36036	0.829963	3.83E-55	-1.69E-46
MS.gene059129	MS.gene36036	0.808225	3.44E-50	-1.69E-46
MS.gene059420	MS.gene36036	0.803787	2.95E-49	-1.69E-46
MS.gene060837	MS.gene36036	0.834377	3.10E-56	-1.69E-46
MS.gene061154	MS.gene36036	0.829348	5.41E-55	-1.69E-46

PPI:

Gene1	Gene2	Type
MS.gene032267	MS.gene36036	PPI
MS.gene36036	MS.gene007908	PPI
MS.gene36036	MS.gene34240	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene36036.t1	MTR_8g463140	98.889	180	2	0	1	180	1	180	2.56e-131	365
MS.gene36036.t1	MTR_2g078770	64.029	139	45	3	45	180	35	171	4.60e-51	162
MS.gene36036.t1	MTR_4g088555	73.810	84	22	0	56	139	54	137	6.81e-43	140
MS.gene36036.t1	MTR_7g110320	52.632	152	53	2	15	154	90	234	3.24e-40	144
MS.gene36036.t1	MTR_7g110320	52.632	152	53	2	15	154	90	234	7.49e-39	140
MS.gene36036.t1	MTR_7g092930	68.889	90	25	1	57	143	57	146	6.09e-38	133
MS.gene36036.t1	MTR_3g085180	70.732	82	24	0	63	144	163	244	1.24e-37	134
MS.gene36036.t1	MTR_2g014200	66.279	86	29	0	57	142	56	141	5.50e-37	125
MS.gene36036.t1	MTR_8g005960	72.941	85	23	0	55	139	177	261	5.71e-37	130
MS.gene36036.t1	MTR_1g086250	53.472	144	60	2	15	154	96	236	1.07e-36	134
MS.gene36036.t1	MTR_7g444860	65.591	93	32	0	57	149	141	233	5.65e-36	127
MS.gene36036.t1	MTR_1g053715	68.605	86	27	0	58	143	67	152	1.72e-35	127
MS.gene36036.t1	MTR_1g035010	60.784	102	40	0	53	154	92	193	4.98e-34	127
MS.gene36036.t1	MTR_2g046550	71.250	80	23	0	65	144	139	218	2.13e-33	125
MS.gene36036.t1	MTR_3g099080	65.385	78	27	0	65	142	98	175	4.84e-32	118
MS.gene36036.t1	MTR_7g028740	63.291	79	29	0	65	143	77	155	5.69e-32	118
MS.gene36036.t1	MTR_4g109770	65.476	84	28	1	65	147	123	206	7.91e-32	119
MS.gene36036.t1	MTR_8g080690	64.198	81	29	0	63	143	149	229	4.74e-31	115
MS.gene36036.t1	MTR_8g080670	65.789	76	26	0	62	137	159	234	7.22e-31	115
MS.gene36036.t1	MTR_5g046670	67.105	76	25	0	63	138	242	317	7.81e-31	117
MS.gene36036.t1	MTR_8g096780	57.292	96	41	0	54	149	88	183	8.08e-31	115
MS.gene36036.t1	MTR_2g461920	68.919	74	23	0	65	138	171	244	4.95e-30	115
MS.gene36036.t1	MTR_8g080680	57.955	88	37	0	62	149	129	216	5.67e-30	113
MS.gene36036.t1	MTR_2g020620	42.697	89	51	0	74	162	99	187	1.59e-16	77.0
MS.gene36036.t1	MTR_1g086250	69.767	43	13	0	112	154	2	44	4.39e-11	61.2

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene36036.t1	AT3G15270	48.913	184	87	5	1	180	1	181	1.33e-42	140
MS.gene36036.t1	AT3G60030	50.000	154	72	1	6	154	63	216	3.08e-40	145
MS.gene36036.t1	AT1G53160	55.118	127	52	2	59	180	48	174	2.43e-39	132
MS.gene36036.t1	AT1G53160	55.118	127	52	2	59	180	48	174	2.43e-39	132
MS.gene36036.t1	AT2G33810	66.667	87	29	0	56	142	45	131	7.96e-39	129
MS.gene36036.t1	AT1G53160	69.231	91	27	1	59	148	48	138	1.09e-38	130
MS.gene36036.t1	AT1G02065	61.111	108	41	1	52	159	175	281	5.35e-37	130
MS.gene36036.t1	AT2G47070	50.000	142	66	2	33	173	78	215	3.10e-36	133
MS.gene36036.t1	AT2G42200	70.370	81	24	0	63	143	72	152	3.26e-34	124
MS.gene36036.t1	AT1G69170	71.053	76	22	0	63	138	122	197	5.71e-33	121
MS.gene36036.t1	AT1G20980	56.034	116	49	2	54	168	109	223	8.22e-33	123
MS.gene36036.t1	AT5G43270	64.706	85	30	0	63	147	167	251	3.44e-32	119
MS.gene36036.t1	AT5G43270	64.706	85	30	0	63	147	167	251	3.44e-32	119
MS.gene36036.t1	AT5G43270	64.706	85	30	0	63	147	167	251	3.44e-32	119
MS.gene36036.t1	AT1G76580	69.136	81	25	0	63	143	112	192	1.18e-31	120
MS.gene36036.t1	AT5G50670	62.500	80	30	0	63	142	99	178	1.29e-31	117
MS.gene36036.t1	AT5G50670	62.500	80	30	0	63	142	99	178	1.29e-31	117
MS.gene36036.t1	AT5G50570	62.500	80	30	0	63	142	99	178	1.29e-31	117
MS.gene36036.t1	AT5G50570	62.500	80	30	0	63	142	99	178	1.29e-31	117
MS.gene36036.t1	AT1G76580	69.136	81	25	0	63	143	112	192	1.34e-31	120
MS.gene36036.t1	AT1G76580	69.136	81	25	0	63	143	112	192	2.21e-31	119
MS.gene36036.t1	AT3G57920	62.500	88	33	0	65	152	59	146	4.39e-31	115
MS.gene36036.t1	AT1G27370	62.195	82	31	0	57	138	168	249	8.01e-30	112
MS.gene36036.t1	AT1G27360	57.000	100	37	1	49	142	159	258	1.08e-29	112
MS.gene36036.t1	AT1G27360	57.000	100	37	1	49	142	159	258	1.08e-29	112
MS.gene36036.t1	AT1G27360	57.000	100	37	1	49	142	159	258	1.08e-29	112
MS.gene36036.t1	AT1G27360	57.000	100	37	1	49	142	159	258	1.08e-29	112
MS.gene36036.t1	AT1G27370	62.195	82	31	0	57	138	168	249	2.33e-29	111
MS.gene36036.t1	AT1G27370	62.195	82	31	0	57	138	168	249	2.33e-29	111
MS.gene36036.t1	AT1G27370	62.195	82	31	0	57	138	168	249	2.33e-29	111
MS.gene36036.t1	AT1G27370	62.195	82	31	0	57	138	168	249	2.33e-29	111
MS.gene36036.t1	AT1G27370	62.195	82	31	0	57	138	168	249	2.33e-29	111
MS.gene36036.t1	AT1G27370	62.195	82	31	0	57	138	168	249	2.33e-29	111
MS.gene36036.t1	AT1G02065	70.492	61	18	0	52	112	175	235	8.75e-24	94.4
MS.gene36036.t1	AT2G47070	72.881	59	16	0	90	148	2	60	2.95e-23	96.3
MS.gene36036.t1	AT5G18830	42.017	119	62	2	20	138	100	211	1.64e-20	88.6
MS.gene36036.t1	AT5G18830	42.017	119	62	2	20	138	100	211	1.76e-20	88.2
MS.gene36036.t1	AT5G18830	42.017	119	62	2	20	138	100	211	2.03e-20	88.2

Find 67 sgRNAs with CRISPR-Local

Find 94 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
AATGAAACTCGCACACTTTA+TGG	0.154731	8.1:-52331199	None:intergenic
CTTCCCTCATTGGCAGCTTC+CGG	0.190285	8.1:-52331927	None:intergenic
TTCCCTCATTGGCAGCTTCC+GGG	0.279455	8.1:-52331926	None:intergenic
GCTGTGACTGCTTCCCTCAT+TGG	0.328447	8.1:-52331937	None:intergenic
ATGAACTTACCAGGCAGTTC+TGG	0.332336	8.1:+52332002	MS.gene36036:CDS
GCACCCGTTGTGGTGGTTGC+AGG	0.348317	8.1:+52331227	MS.gene36036:CDS
GGGGTCGGTGGCGGGAGAAG+AGG	0.366575	8.1:+52331092	MS.gene36036:CDS
AGCTGCCGCAGGCGGTTGGC+TGG	0.389734	8.1:+52331876	MS.gene36036:CDS
CTGAAGAAGAGAAGAAGAAA+GGG	0.392986	8.1:+52331072	MS.gene36036:CDS
TTAGCTTCATCTAATGTTGA+AGG	0.400420	8.1:-52332033	None:intergenic
CAACATGGTGGAAGAAGAAA+TGG	0.403464	8.1:+52331010	MS.gene36036:CDS
AGCCCTGCAACCACCACAAC+GGG	0.406005	8.1:-52331230	None:intergenic
TGGTTGCAGGGCTGAGGCAG+AGG	0.413422	8.1:+52331240	MS.gene36036:CDS
AGAAGAAAGGGGTCGGTGGC+GGG	0.418165	8.1:+52331084	MS.gene36036:CDS
GTCGGTGGCGGGAGAAGAGG+AGG	0.431374	8.1:+52331095	MS.gene36036:CDS
AAGAAGAAAGGGGTCGGTGG+CGG	0.439947	8.1:+52331083	MS.gene36036:CDS
ATCCTGCATTGAGTTTCCTT+AGG	0.443576	8.1:-52331975	None:intergenic
GGCGGGAGAAGAGGAGGTGG+TGG	0.448247	8.1:+52331101	MS.gene36036:CDS
AAATGAAGTAGAAGAGGAGG+AGG	0.457054	8.1:+52331034	MS.gene36036:CDS
GGGAGAAGAGGAGGTGGTGG+CGG	0.468248	8.1:+52331104	MS.gene36036:CDS
CTCATTGGCAGCTTCCGGGT+TGG	0.474954	8.1:-52331922	None:intergenic
AACCACCACAACGGGTGCCT+TGG	0.478730	8.1:-52331222	None:intergenic
CGCACACTTTATGGCGGCGA+TGG	0.480858	8.1:-52331190	None:intergenic
CACCTCTCTGCTTGGCAACA+AGG	0.490126	8.1:-52331137	None:intergenic
CCGCTCCACACCTCTCTGCT+TGG	0.493345	8.1:-52331145	None:intergenic
GAGGTGTGGAGCGGATTTGA+CGG	0.501356	8.1:+52331154	MS.gene36036:CDS
AATGGAAAATGAAGTAGAAG+AGG	0.504373	8.1:+52331028	MS.gene36036:CDS
ACTGAAGAAGAGAAGAAGAA+AGG	0.514644	8.1:+52331071	MS.gene36036:CDS
AAGAAGCTGCCGCAGGCGGT+TGG	0.518296	8.1:+52331872	MS.gene36036:CDS
GGAAAATGAAGTAGAAGAGG+AGG	0.522072	8.1:+52331031	MS.gene36036:CDS
GAGGAAGAGAACATTGATGA+TGG	0.526926	8.1:+52330971	MS.gene36036:CDS
GGTGGCGGGAGAAGAGGAGG+TGG	0.533572	8.1:+52331098	MS.gene36036:CDS
TTGTGGTGGTTGCAGGGCTG+AGG	0.534426	8.1:+52331234	MS.gene36036:CDS
GCTGTGCAGGTTCCATGACT+TGG	0.541073	8.1:+52331830	MS.gene36036:intron
CACCCGTTGTGGTGGTTGCA+GGG	0.543935	8.1:+52331228	MS.gene36036:CDS
TTCCAAGGCACCCGTTGTGG+TGG	0.545459	8.1:+52331220	MS.gene36036:CDS
GAAGAGAAGAAGAAAGGGGT+CGG	0.545505	8.1:+52331077	MS.gene36036:CDS
TCATTCCAAGGCACCCGTTG+TGG	0.554790	8.1:+52331217	MS.gene36036:CDS
CTCACAAAACAATGGAAGCT+AGG	0.561345	8.1:+52330940	None:intergenic
AACCCGGAAGCTGCCAATGA+GGG	0.564949	8.1:+52331924	MS.gene36036:CDS
GACTTATAACCAGAACTGCC+TGG	0.566906	8.1:-52332011	None:intergenic
CAACCCGGAAGCTGCCAATG+AGG	0.568620	8.1:+52331923	MS.gene36036:CDS
CATCAAACTCTACCAAGTCA+TGG	0.569400	8.1:-52331842	None:intergenic
AACCTAAGGAAACTCAATGC+AGG	0.572114	8.1:+52331973	MS.gene36036:CDS
TGATGATGGAAAAGATGAGA+AGG	0.573354	8.1:+52330985	MS.gene36036:CDS
CTGGACACAATGAACGGCGC+CGG	0.573671	8.1:+52331895	MS.gene36036:CDS
TGTGTCCAGCCAACCGCCTG+CGG	0.577001	8.1:-52331881	None:intergenic
GAGAAGAAGAAAGGGGTCGG+TGG	0.581205	8.1:+52331080	MS.gene36036:CDS
AGTGTGCGAGTTTCATTCCA+AGG	0.582628	8.1:+52331205	MS.gene36036:CDS
AGTCTAAAAGAAGCTGCCGC+AGG	0.602245	8.1:+52331865	MS.gene36036:CDS
ACGGCGCCGGAAAACCAACC+CGG	0.609142	8.1:+52331908	MS.gene36036:CDS
CAAAGGACAACATCAACCTA+AGG	0.609316	8.1:+52331959	MS.gene36036:CDS
AATGAAGTAGAAGAGGAGGA+GGG	0.609345	8.1:+52331035	MS.gene36036:CDS
AGGATTCAGATGAACTTACC+AGG	0.609388	8.1:+52331993	MS.gene36036:CDS
CTAAAAGAAGCTGCCGCAGG+CGG	0.624624	8.1:+52331868	MS.gene36036:CDS
TGTTGCCAAGCAGAGAGGTG+TGG	0.631386	8.1:+52331140	MS.gene36036:CDS
GAGGGAAGCAGTCACAGCAA+AGG	0.634063	8.1:+52331942	MS.gene36036:CDS
CAGCCCTGCAACCACCACAA+CGG	0.634176	8.1:-52331231	None:intergenic
CACCTTGTTGCCAAGCAGAG+AGG	0.641872	8.1:+52331135	MS.gene36036:CDS
GGTTGGCTGGACACAATGAA+CGG	0.643542	8.1:+52331889	MS.gene36036:CDS
CTCTCTGCTTGGCAACAAGG+TGG	0.645735	8.1:-52331134	None:intergenic
CCAAGCAGAGAGGTGTGGAG+CGG	0.655389	8.1:+52331145	MS.gene36036:CDS
TGAAGAAGAGAAGAAGAAAG+GGG	0.675275	8.1:+52331073	MS.gene36036:CDS
TGGAAGCTAGGAGTATTGAG+AGG	0.681882	8.1:+52330952	MS.gene36036:CDS
GATGAGAAGGAACAACATGG+TGG	0.695331	8.1:+52330998	MS.gene36036:CDS
GAAACTCGCACACTTTATGG+CGG	0.713336	8.1:-52331196	None:intergenic
AAAGATGAGAAGGAACAACA+TGG	0.732079	8.1:+52330995	MS.gene36036:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	AAAGCAAACAAAAATAATTA+AGG	+	chr8.1:52331490-52331509	MS.gene36036:intron	15.0%
!!	AAGCAAACAAAAATAATTAA+GGG	+	chr8.1:52331491-52331510	MS.gene36036:intron	15.0%
!!!	AAATCGAATGTTTTAAAAAT+TGG	+	chr8.1:52331413-52331432	MS.gene36036:intron	15.0%
!!!	TATTCTTTTTGCAGAATTTT+AGG	-	chr8.1:52331748-52331767	None:intergenic	20.0%
!!!	TTTTCTTTTGACATGTTTAT+AGG	+	chr8.1:52331335-52331354	MS.gene36036:intron	20.0%
!	AAAACTGACCTTAAATATCT+TGG	+	chr8.1:52331701-52331720	MS.gene36036:intron	25.0%
!	ATCTCAGTTATACAATAGTT+CGG	-	chr8.1:52331562-52331581	None:intergenic	25.0%
!	CAAACAAAAATAATTAAGGG+AGG	+	chr8.1:52331494-52331513	MS.gene36036:intron	25.0%
!!!	TTGAAGCAATGTTTTAAAAC+TGG	-	chr8.1:52331659-52331678	None:intergenic	25.0%
	AATGGAAAATGAAGTAGAAG+AGG	+	chr8.1:52331028-52331047	MS.gene36036:CDS	30.0%
	CTAAGTAAACGATAACGTTA+AGG	-	chr8.1:52331460-52331479	None:intergenic	30.0%
	GAGCTAAAAAAACAGATCAT+GGG	-	chr8.1:52331382-52331401	None:intergenic	30.0%
	TGAGCTAAAAAAACAGATCA+TGG	-	chr8.1:52331383-52331402	None:intergenic	30.0%
!	ATATACTACGCATTGATCAA+TGG	+	chr8.1:52331799-52331818	MS.gene36036:intron	30.0%
!	CTGATTCAACCGATTTAAAT+GGG	-	chr8.1:52331626-52331645	None:intergenic	30.0%
!	TCTGATTCAACCGATTTAAA+TGG	-	chr8.1:52331627-52331646	None:intergenic	30.0%
!	TCTTTTGACATGTTTATAGG+TGG	+	chr8.1:52331338-52331357	MS.gene36036:intron	30.0%
!!	ATTGAGAGTGTTAGAGAAAA+TGG	-	chr8.1:52331307-52331326	None:intergenic	30.0%
	AAAGATGAGAAGGAACAACA+TGG	+	chr8.1:52330995-52331014	MS.gene36036:CDS	35.0%
	AATGAAACTCGCACACTTTA+TGG	-	chr8.1:52331202-52331221	None:intergenic	35.0%
	ACGATAACGTTAAGGTTTCA+TGG	-	chr8.1:52331452-52331471	None:intergenic	35.0%
	ACTGAAGAAGAGAAGAAGAA+AGG	+	chr8.1:52331071-52331090	MS.gene36036:CDS	35.0%
	CTGAAGAAGAGAAGAAGAAA+GGG	+	chr8.1:52331072-52331091	MS.gene36036:CDS	35.0%
	GCTCTAGTCCAAGATATTTA+AGG	-	chr8.1:52331712-52331731	None:intergenic	35.0%
	TCAATCAGCGAATTTAATCC+CGG	+	chr8.1:52331586-52331605	MS.gene36036:intron	35.0%
	TGAAGAAGAGAAGAAGAAAG+GGG	+	chr8.1:52331073-52331092	MS.gene36036:CDS	35.0%
!	CAACCGATTTAAATGGGAAT+CGG	-	chr8.1:52331620-52331639	None:intergenic	35.0%
!!	TGATGATGGAAAAGATGAGA+AGG	+	chr8.1:52330985-52331004	MS.gene36036:CDS	35.0%
	AAATGAAGTAGAAGAGGAGG+AGG	+	chr8.1:52331034-52331053	MS.gene36036:CDS	40.0%
	AACCTAAGGAAACTCAATGC+AGG	+	chr8.1:52331973-52331992	MS.gene36036:CDS	40.0%
	AATGAAGTAGAAGAGGAGGA+GGG	+	chr8.1:52331035-52331054	MS.gene36036:CDS	40.0%
	AGGATTCAGATGAACTTACC+AGG	+	chr8.1:52331993-52332012	MS.gene36036:CDS	40.0%
	ATCAGATCAGTCACTTCAAC+TGG	+	chr8.1:52331531-52331550	MS.gene36036:intron	40.0%
	ATCCTGCATTGAGTTTCCTT+AGG	-	chr8.1:52331978-52331997	None:intergenic	40.0%
	CAAAGGACAACATCAACCTA+AGG	+	chr8.1:52331959-52331978	MS.gene36036:CDS	40.0%
	CATCAAACTCTACCAAGTCA+TGG	-	chr8.1:52331845-52331864	None:intergenic	40.0%
	CGAATTTAATCCCGGCAAAT+TGG	+	chr8.1:52331594-52331613	MS.gene36036:intron	40.0%
	GAGGAAGAGAACATTGATGA+TGG	+	chr8.1:52330971-52330990	MS.gene36036:CDS	40.0%
	GGAAAATGAAGTAGAAGAGG+AGG	+	chr8.1:52331031-52331050	MS.gene36036:CDS	40.0%
!	CAACATGGTGGAAGAAGAAA+TGG	+	chr8.1:52331010-52331029	MS.gene36036:CDS	40.0%
!	TGGCCGATTCCCATTTAAAT+CGG	+	chr8.1:52331614-52331633	MS.gene36036:intron	40.0%
!!	GGTTTTGTCAACAATGTAGC+AGG	+	chr8.1:52331261-52331280	MS.gene36036:CDS	40.0%
	AGTGTGCGAGTTTCATTCCA+AGG	+	chr8.1:52331205-52331224	MS.gene36036:CDS	45.0%
	ATGAACTTACCAGGCAGTTC+TGG	+	chr8.1:52332002-52332021	MS.gene36036:CDS	45.0%
	GAAACTCGCACACTTTATGG+CGG	-	chr8.1:52331199-52331218	None:intergenic	45.0%
	GAAGAGAAGAAGAAAGGGGT+CGG	+	chr8.1:52331077-52331096	MS.gene36036:CDS	45.0%
	GACTTATAACCAGAACTGCC+TGG	-	chr8.1:52332014-52332033	None:intergenic	45.0%
	GATGAGAAGGAACAACATGG+TGG	+	chr8.1:52330998-52331017	MS.gene36036:CDS	45.0%
!!	TGGAAGCTAGGAGTATTGAG+AGG	+	chr8.1:52330952-52330971	MS.gene36036:CDS	45.0%
	AATGGCGAGTTATGCTGTGC+AGG	+	chr8.1:52331817-52331836	MS.gene36036:intron	50.0%
	AGTCTAAAAGAAGCTGCCGC+AGG	+	chr8.1:52331865-52331884	MS.gene36036:CDS	50.0%
	ATGGGAATCGGCCAATTTGC+CGG	-	chr8.1:52331608-52331627	None:intergenic	50.0%
!	GGTTGGCTGGACACAATGAA+CGG	+	chr8.1:52331889-52331908	MS.gene36036:CDS	50.0%
	AACCCGGAAGCTGCCAATGA+GGG	+	chr8.1:52331924-52331943	MS.gene36036:CDS	55.0%
	AAGAAGAAAGGGGTCGGTGG+CGG	+	chr8.1:52331083-52331102	MS.gene36036:CDS	55.0%
	CACCTCTCTGCTTGGCAACA+AGG	-	chr8.1:52331140-52331159	None:intergenic	55.0%
	CACCTTGTTGCCAAGCAGAG+AGG	+	chr8.1:52331135-52331154	MS.gene36036:CDS	55.0%
	CTAAAAGAAGCTGCCGCAGG+CGG	+	chr8.1:52331868-52331887	MS.gene36036:CDS	55.0%
	CTCTCTGCTTGGCAACAAGG+TGG	-	chr8.1:52331137-52331156	None:intergenic	55.0%
	CTTCCCTCATTGGCAGCTTC+CGG	-	chr8.1:52331930-52331949	None:intergenic	55.0%
	GAGAAGAAGAAAGGGGTCGG+TGG	+	chr8.1:52331080-52331099	MS.gene36036:CDS	55.0%
	GAGGGAAGCAGTCACAGCAA+AGG	+	chr8.1:52331942-52331961	MS.gene36036:CDS	55.0%
	GCTGTGACTGCTTCCCTCAT+TGG	-	chr8.1:52331940-52331959	None:intergenic	55.0%
	GCTGTGCAGGTTCCATGACT+TGG	+	chr8.1:52331830-52331849	MS.gene36036:intron	55.0%
	TGGGAATCGGCCAATTTGCC+GGG	-	chr8.1:52331607-52331626	None:intergenic	55.0%
	TGTTGCCAAGCAGAGAGGTG+TGG	+	chr8.1:52331140-52331159	MS.gene36036:CDS	55.0%
	TTCCCTCATTGGCAGCTTCC+GGG	-	chr8.1:52331929-52331948	None:intergenic	55.0%
!	GAGGTGTGGAGCGGATTTGA+CGG	+	chr8.1:52331154-52331173	MS.gene36036:CDS	55.0%
!	TCATTCCAAGGCACCCGTTG+TGG	+	chr8.1:52331217-52331236	MS.gene36036:CDS	55.0%
!!!	CAGCTTCCGGGTTGGTTTTC+CGG	-	chr8.1:52331917-52331936	None:intergenic	55.0%
	AACCACCACAACGGGTGCCT+TGG	-	chr8.1:52331225-52331244	None:intergenic	60.0%
	AGAAGAAAGGGGTCGGTGGC+GGG	+	chr8.1:52331084-52331103	MS.gene36036:CDS	60.0%
	AGCCCTGCAACCACCACAAC+GGG	-	chr8.1:52331233-52331252	None:intergenic	60.0%
	CAACCCGGAAGCTGCCAATG+AGG	+	chr8.1:52331923-52331942	MS.gene36036:CDS	60.0%
	CACCCGTTGTGGTGGTTGCA+GGG	+	chr8.1:52331228-52331247	MS.gene36036:CDS	60.0%
	CAGCCCTGCAACCACCACAA+CGG	-	chr8.1:52331234-52331253	None:intergenic	60.0%
	CGCACACTTTATGGCGGCGA+TGG	-	chr8.1:52331193-52331212	None:intergenic	60.0%
	CTCATTGGCAGCTTCCGGGT+TGG	-	chr8.1:52331925-52331944	None:intergenic	60.0%
	CTGGACACAATGAACGGCGC+CGG	+	chr8.1:52331895-52331914	MS.gene36036:CDS	60.0%
	TTGTGGTGGTTGCAGGGCTG+AGG	+	chr8.1:52331234-52331253	MS.gene36036:CDS	60.0%
!	CCAAGCAGAGAGGTGTGGAG+CGG	+	chr8.1:52331145-52331164	MS.gene36036:CDS	60.0%
!	TTCCAAGGCACCCGTTGTGG+TGG	+	chr8.1:52331220-52331239	MS.gene36036:CDS	60.0%
	AAGAAGCTGCCGCAGGCGGT+TGG	+	chr8.1:52331872-52331891	MS.gene36036:CDS	65.0%
	CCGCTCCACACCTCTCTGCT+TGG	-	chr8.1:52331148-52331167	None:intergenic	65.0%
	GCACCCGTTGTGGTGGTTGC+AGG	+	chr8.1:52331227-52331246	MS.gene36036:CDS	65.0%
	TGGTTGCAGGGCTGAGGCAG+AGG	+	chr8.1:52331240-52331259	MS.gene36036:CDS	65.0%
	TGTGTCCAGCCAACCGCCTG+CGG	-	chr8.1:52331884-52331903	None:intergenic	65.0%
!	ACGGCGCCGGAAAACCAACC+CGG	+	chr8.1:52331908-52331927	MS.gene36036:CDS	65.0%
!	GGGAGAAGAGGAGGTGGTGG+CGG	+	chr8.1:52331104-52331123	MS.gene36036:CDS	65.0%
	GGCGGGAGAAGAGGAGGTGG+TGG	+	chr8.1:52331101-52331120	MS.gene36036:CDS	70.0%
!!	GGTGGCGGGAGAAGAGGAGG+TGG	+	chr8.1:52331098-52331117	MS.gene36036:CDS	70.0%
!!	GTCGGTGGCGGGAGAAGAGG+AGG	+	chr8.1:52331095-52331114	MS.gene36036:CDS	70.0%
	AGCTGCCGCAGGCGGTTGGC+TGG	+	chr8.1:52331876-52331895	MS.gene36036:CDS	75.0%
!!	GGGGTCGGTGGCGGGAGAAG+AGG	+	chr8.1:52331092-52331111	MS.gene36036:CDS	75.0%

Chromosome	Type	Strat	End	Strand	Name
chr8.1	gene	52330951	52332049	52330951	ID=MS.gene36036
chr8.1	mRNA	52330951	52332049	52330951	ID=MS.gene36036.t1;Parent=MS.gene36036
chr8.1	exon	52330951	52331282	52330951	ID=MS.gene36036.t1.exon1;Parent=MS.gene36036.t1
chr8.1	CDS	52330951	52331282	52330951	ID=cds.MS.gene36036.t1;Parent=MS.gene36036.t1
chr8.1	exon	52331839	52332049	52331839	ID=MS.gene36036.t1.exon2;Parent=MS.gene36036.t1
chr8.1	CDS	52331839	52332049	52331839	ID=cds.MS.gene36036.t1;Parent=MS.gene36036.t1

Gene Sequence

>MS.gene36036

ATGGAAGCTAGGAGTATTGAGAGGAAGAGAACATTGATGATGGAAAAGATGAGAAGGAACAACATGGTGGAAGAAGAAATGGAAAATGAAGTAGAAGAGGAGGAGGGTGATGTTAGTCTGACTGAAGAAGAGAAGAAGAAAGGGGTCGGTGGCGGGAGAAGAGGAGGTGGTGGCGGTGTTTCTCCACCTTGTTGCCAAGCAGAGAGGTGTGGAGCGGATTTGACGGATGCAAAGAGATACCATCGCCGCCATAAAGTGTGCGAGTTTCATTCCAAGGCACCCGTTGTGGTGGTTGCAGGGCTGAGGCAGAGGTTTTGTCAACAATGTAGCAGGTCTTCAATCTTATATCTACACCATTTTCTCTAACACTCTCAATAATTTGTTTTTTCTTTTGACATGTTTATAGGTGGTAGAGTCTGTCATGTTTTCCCATGATCTGTTTTTTTAGCTCATATTTACATAAAATCGAATGTTTTAAAAATTGGACAAAATATTATACCATGAAACCTTAACGTTATCGTTTACTTAGCTCAATTAGAAAAGCAAACAAAAATAATTAAGGGAGGCAAAAAAAATAAAAATCAGATCAGTCACTTCAACTGGTTTAACCGAACTATTGTATAACTGAGATTAAATCAATCAGCGAATTTAATCCCGGCAAATTGGCCGATTCCCATTTAAATCGGTTGAATCAGACACTTCAATCCAGTTTTAAAACATTGCTTCAAACAATTATATATTTGTAAGTGAAAAACTGACCTTAAATATCTTGGACTAGAGCGTCATTTTCTCATCCTAAAATTCTGCAAAAAGAATAAACTAATCATTATTTCATATCATATACAAAGATATACTACGCATTGATCAATGGCGAGTTATGCTGTGCAGGTTCCATGACTTGGTAGAGTTTGATGAGTCTAAAAGAAGCTGCCGCAGGCGGTTGGCTGGACACAATGAACGGCGCCGGAAAACCAACCCGGAAGCTGCCAATGAGGGAAGCAGTCACAGCAAAGGACAACATCAACCTAAGGAAACTCAATGCAGGATTCAGATGAACTTACCAGGCAGTTCTGGTTATAAGTCCTTCAACATTAGATGA

Protein sequence

>MS.gene36036.t1

MEARSIERKRTLMMEKMRRNNMVEEEMENEVEEEEGDVSLTEEEKKKGVGGGRRGGGGGVSPPCCQAERCGADLTDAKRYHRRHKVCEFHSKAPVVVVAGLRQRFCQQCSRFHDLVEFDESKRSCRRRLAGHNERRRKTNPEAANEGSSHSKGQHQPKETQCRIQMNLPGSSGYKSFNIR