Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene007964.t1 | XP_003601051.1 | 77.5 | 435 | 50 | 2 | 1 | 387 | 1 | 435 | 6.10E-110 | 407.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene007964.t1 | G7J309 | 77.5 | 435 | 50 | 2 | 1 | 387 | 1 | 435 | 4.4e-110 | 407.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene007964 | MS.gene99887 | PPI |
| MS.gene007964 | MS.gene039956 | PPI |
| MS.gene007964 | MS.gene031884 | PPI |
| MS.gene039956 | MS.gene007964 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene007964.t1 | MTR_3g072480 | 85.200 | 500 | 25 | 3 | 1 | 452 | 1 | 499 | 0.0 | 734 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene007964.t1 | AT1G44780 | 44.368 | 435 | 197 | 11 | 12 | 440 | 64 | 459 | 7.55e-77 | 247 |
| MS.gene007964.t1 | AT1G44780 | 44.138 | 435 | 199 | 10 | 12 | 440 | 64 | 460 | 1.38e-76 | 246 |
| MS.gene007964.t1 | AT4G08310 | 44.724 | 398 | 196 | 10 | 1 | 393 | 64 | 442 | 1.10e-75 | 245 |
Find 99 sgRNAs with CRISPR-Local
Find 282 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTTACTTATAAACTTCTTAA+AGG | 0.192372 | 3.3:-62832979 | None:intergenic |
| CCCATTGCCTTCTGCTATCT+TGG | 0.207283 | 3.3:-62832647 | None:intergenic |
| TCTTCTGATGCTGCTTTATC+AGG | 0.212935 | 3.3:-62833362 | None:intergenic |
| CCCTGAAGATGAGGAGAAAA+TGG | 0.258537 | 3.3:+62832570 | MS.gene007964:CDS |
| TTTAATAGCTTTCTTAATTA+GGG | 0.269138 | 3.3:-62832692 | None:intergenic |
| TCCACTGGAATCTTGGGCTT+TGG | 0.303298 | 3.3:-62834824 | None:intergenic |
| GGGTAGTCTTCGCCGATTAT+TGG | 0.304072 | 3.3:+62832920 | MS.gene007964:CDS |
| ACTAGTTTCCACTGGAATCT+TGG | 0.310141 | 3.3:-62834831 | None:intergenic |
| TCTGAGGAGGACGGGGAAAA+AGG | 0.327743 | 3.3:+62832484 | MS.gene007964:CDS |
| CTAGTTTCCACTGGAATCTT+GGG | 0.332663 | 3.3:-62834830 | None:intergenic |
| GGAGTCTGCATCTTGCCTTT+TGG | 0.346161 | 3.3:-62833278 | None:intergenic |
| CGGACAACTAATTAAAGAAT+TGG | 0.355478 | 3.3:+62833897 | MS.gene007964:CDS |
| ATGGAAGATTCTCCGGTATT+AGG | 0.360072 | 3.3:+62832589 | MS.gene007964:CDS |
| TTAGCACTTTCTGCAGGTTC+CGG | 0.360550 | 3.3:-62833131 | None:intergenic |
| TTACTTATAAACTTCTTAAA+GGG | 0.364968 | 3.3:-62832978 | None:intergenic |
| ATTAATGTCTTCTGAAGTTC+CGG | 0.373428 | 3.3:+62833112 | MS.gene007964:CDS |
| TAAGATCTTCCTCCAATAAT+CGG | 0.374296 | 3.3:-62832932 | None:intergenic |
| TTCTTAATTAGGGTCTCATT+TGG | 0.378832 | 3.3:-62832682 | None:intergenic |
| GGAATCTTGGGCTTTGGTGG+TGG | 0.379600 | 3.3:-62834818 | None:intergenic |
| ATCTTGGGCTTTGGTGGTGG+AGG | 0.389017 | 3.3:-62834815 | None:intergenic |
| CAATCTACCCAGCAAGAAAA+AGG | 0.390333 | 3.3:+62833334 | MS.gene007964:CDS |
| TTGTGTCAAGTACACGTAGA+AGG | 0.396234 | 3.3:+62834771 | MS.gene007964:CDS |
| ACTGGAATCTTGGGCTTTGG+TGG | 0.401139 | 3.3:-62834821 | None:intergenic |
| TGATACTAAAGCAACTAAAA+AGG | 0.402536 | 3.3:+62833175 | MS.gene007964:CDS |
| AGGTCTGCTTAAAGAACAAA+AGG | 0.410447 | 3.3:+62832609 | MS.gene007964:CDS |
| TAGAAATCAAAGAAGTAAAC+AGG | 0.410976 | 3.3:+62834702 | MS.gene007964:intron |
| GTCCTCCTCAGACGTCTTTG+TGG | 0.425698 | 3.3:-62832473 | None:intergenic |
| TGATTTCAGAAATGTAACTT+TGG | 0.426248 | 3.3:+62832899 | MS.gene007964:intron |
| GTTGTCATTATCACTACCTT+TGG | 0.428731 | 3.3:-62834864 | None:intergenic |
| GATTTCAGAAATGTAACTTT+GGG | 0.430263 | 3.3:+62832900 | MS.gene007964:intron |
| TTATTTCTGCCACAGTGCTT+AGG | 0.445202 | 3.3:+62832427 | MS.gene007964:intron |
| GAGGATAGCAGTGATGAGGA+TGG | 0.464877 | 3.3:+62834944 | MS.gene007964:CDS |
| AGCAGGTCCCTGAAAACAAA+CGG | 0.472188 | 3.3:+62833872 | MS.gene007964:CDS |
| CGTTTACTGTACACAGGAGT+TGG | 0.472645 | 3.3:-62833699 | None:intergenic |
| CCAAGATAGCAGAAGGCAAT+GGG | 0.479554 | 3.3:+62832647 | MS.gene007964:CDS |
| ACATCAATCTAAAGATGAAA+AGG | 0.481334 | 3.3:+62832543 | MS.gene007964:CDS |
| CAGGAAGAAGGCACGGGCCA+AGG | 0.488327 | 3.3:+62834721 | MS.gene007964:CDS |
| CCACAGTGCTTAGGAGAGGC+TGG | 0.495291 | 3.3:+62832436 | MS.gene007964:intron |
| CAAAGACGTCTGAGGAGGAC+GGG | 0.495426 | 3.3:+62832476 | MS.gene007964:CDS |
| AGTATTCTCTGCTGACGAAT+GGG | 0.496613 | 3.3:-62833432 | None:intergenic |
| ATCAATACCCTCAAGTTCCT+TGG | 0.499914 | 3.3:-62834738 | None:intergenic |
| TCTTTGCCACTAGTTTCCAC+TGG | 0.500056 | 3.3:-62834839 | None:intergenic |
| CTTCATACCATCTTCTGCCA+TGG | 0.507544 | 3.3:-62830992 | None:intergenic |
| AAATCTGTTATTAAAGCATG+TGG | 0.508183 | 3.3:+62833735 | MS.gene007964:CDS |
| GGCAAGATGCAGACTCCTGT+TGG | 0.510887 | 3.3:+62833284 | MS.gene007964:CDS |
| AGATGAAGAAGATGAAGAAG+AGG | 0.513270 | 3.3:+62834922 | MS.gene007964:CDS |
| GGAGAAAATGGAAGATTCTC+CGG | 0.519838 | 3.3:+62832582 | MS.gene007964:CDS |
| CAAAGAAGTAAACAGGAAGA+AGG | 0.525606 | 3.3:+62834709 | MS.gene007964:CDS |
| GTGAGAAACGCGAGAGCGCA+TGG | 0.525813 | 3.3:-62831061 | None:intergenic |
| GTCTTCAAATCCATCTGAGA+AGG | 0.532832 | 3.3:+62833945 | MS.gene007964:CDS |
| GAGAGTGAAGAATTTAATGC+GGG | 0.538623 | 3.3:+62834971 | MS.gene007964:CDS |
| ACCAAGATAGCAGAAGGCAA+TGG | 0.540066 | 3.3:+62832646 | MS.gene007964:CDS |
| GGTCTGCTTAAAGAACAAAA+GGG | 0.541386 | 3.3:+62832610 | MS.gene007964:CDS |
| GATAATGACAACGATGATGA+AGG | 0.542203 | 3.3:+62834875 | MS.gene007964:CDS |
| TAGTATTCTCTGCTGACGAA+TGG | 0.542456 | 3.3:-62833433 | None:intergenic |
| GCAGGTCCCTGAAAACAAAC+GGG | 0.543917 | 3.3:+62833873 | MS.gene007964:CDS |
| TAGTCTTCGCCGATTATTGG+AGG | 0.546979 | 3.3:+62832923 | MS.gene007964:CDS |
| AGAGGAGGATAGCAGTGATG+AGG | 0.550650 | 3.3:+62834940 | MS.gene007964:CDS |
| TCTGATTCATGCAGATGAAG+AGG | 0.550672 | 3.3:+62836007 | MS.gene007964:intron |
| GGCACGGGCCAAGGAACTTG+AGG | 0.552578 | 3.3:+62834730 | MS.gene007964:CDS |
| TCTTTAAGCAGACCTAATAC+CGG | 0.555361 | 3.3:-62832601 | None:intergenic |
| AAGTAAACAGGAAGAAGGCA+CGG | 0.562441 | 3.3:+62834714 | MS.gene007964:CDS |
| AGAGAGACCATGGCAGAAGA+TGG | 0.563600 | 3.3:+62830985 | None:intergenic |
| TGAAGAAGATGAAGAAGAGG+AGG | 0.566614 | 3.3:+62834925 | MS.gene007964:CDS |
| TTCAGATGAAGAGAGTGAAG+AGG | 0.569278 | 3.3:+62833223 | MS.gene007964:CDS |
| ACAAGAGACTGAAGGACAGA+AGG | 0.569598 | 3.3:+62832516 | MS.gene007964:CDS |
| TGTGTCAAGTACACGTAGAA+GGG | 0.572728 | 3.3:+62834772 | MS.gene007964:CDS |
| ACAAAGACGTCTGAGGAGGA+CGG | 0.573683 | 3.3:+62832475 | MS.gene007964:CDS |
| AGTAAACAGGAAGAAGGCAC+GGG | 0.576564 | 3.3:+62834715 | MS.gene007964:CDS |
| GCACGGGCCAAGGAACTTGA+GGG | 0.580652 | 3.3:+62834731 | MS.gene007964:CDS |
| TCTTCAAATCCATCTGAGAA+GGG | 0.588082 | 3.3:+62833946 | MS.gene007964:CDS |
| AAAGGATCTCCCTGAAGATG+AGG | 0.591029 | 3.3:+62832561 | MS.gene007964:CDS |
| AGAGACTGAAGGACAGAAGG+AGG | 0.595213 | 3.3:+62832519 | MS.gene007964:CDS |
| GAAGAAATACTATCTAGAGA+AGG | 0.598424 | 3.3:+62833919 | MS.gene007964:CDS |
| CAAGGAACCAAGATAGCAGA+AGG | 0.602593 | 3.3:+62832640 | MS.gene007964:CDS |
| GTCTGCTTAAAGAACAAAAG+GGG | 0.608849 | 3.3:+62832611 | MS.gene007964:CDS |
| TATAAGTAAAGAGCTTGATG+AGG | 0.612914 | 3.3:+62832992 | MS.gene007964:CDS |
| TGAGAGTGAAGAATTTAATG+CGG | 0.614155 | 3.3:+62834970 | MS.gene007964:CDS |
| AAAGACGTCTGAGGAGGACG+GGG | 0.615894 | 3.3:+62832477 | MS.gene007964:CDS |
| TTATTAAAGCATGTGGGATG+AGG | 0.618988 | 3.3:+62833742 | MS.gene007964:CDS |
| GTCCCTGAAAACAAACGGGA+CGG | 0.623725 | 3.3:+62833877 | MS.gene007964:CDS |
| CATACTCTGCATTAGCCTTG+AGG | 0.627628 | 3.3:-62832729 | None:intergenic |
| TCTGCCACAGTGCTTAGGAG+AGG | 0.635941 | 3.3:+62832432 | MS.gene007964:intron |
| AATAGTGATGCAGAAGACGA+TGG | 0.643756 | 3.3:+62833386 | MS.gene007964:CDS |
| TCCTGTGTACAGTAAACGTG+TGG | 0.644428 | 3.3:+62833704 | MS.gene007964:CDS |
| AAGATTCCAGTGGAAACTAG+TGG | 0.653175 | 3.3:+62834833 | MS.gene007964:CDS |
| ACTAGTGGCAAAGATACCAA+AGG | 0.657324 | 3.3:+62834848 | MS.gene007964:CDS |
| TCTGCTTAAAGAACAAAAGG+GGG | 0.658439 | 3.3:+62832612 | MS.gene007964:CDS |
| TGATGCCACAAAGACGTCTG+AGG | 0.660915 | 3.3:+62832468 | MS.gene007964:CDS |
| ACCAAAGCCCAAGATTCCAG+TGG | 0.665045 | 3.3:+62834823 | MS.gene007964:CDS |
| GAAAGTACACAAGAGACTGA+AGG | 0.670007 | 3.3:+62832508 | MS.gene007964:CDS |
| TGCCACAAAGACGTCTGAGG+AGG | 0.671550 | 3.3:+62832471 | MS.gene007964:CDS |
| TCCACACGTTTACTGTACAC+AGG | 0.676303 | 3.3:-62833705 | None:intergenic |
| AATCTGTTATTAAAGCATGT+GGG | 0.677116 | 3.3:+62833736 | MS.gene007964:CDS |
| GTCAGCAGAGAATACTACCA+AGG | 0.702422 | 3.3:+62833439 | MS.gene007964:CDS |
| AGGCAAAGAAAATGACGAGG+AGG | 0.708511 | 3.3:+62834895 | MS.gene007964:CDS |
| CTGCTTAAAGAACAAAAGGG+GGG | 0.713202 | 3.3:+62832613 | MS.gene007964:CDS |
| TGAAGGCAAAGAAAATGACG+AGG | 0.732415 | 3.3:+62834892 | MS.gene007964:CDS |
| AGAAACGCGAGAGCGCATGG+CGG | 0.788364 | 3.3:-62831058 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AGTAATTATTTCATTATATA+AGG | - | chr3.3:62833559-62833578 | None:intergenic | 10.0% |
| !!! | TATTACTGAATTTTTTTATT+AGG | + | chr3.3:62835284-62835303 | MS.gene007964:intron | 10.0% |
| !! | AAACAATATAACTTCAAATT+TGG | - | chr3.3:62831845-62831864 | None:intergenic | 15.0% |
| !! | AAATCCAAATAAAAGAATAA+AGG | - | chr3.3:62832017-62832036 | None:intergenic | 15.0% |
| !! | ATTAATATCAGCATATTATT+TGG | + | chr3.3:62832835-62832854 | MS.gene007964:intron | 15.0% |
| !! | GTTAAATGTATTAAATATGT+TGG | + | chr3.3:62833611-62833630 | MS.gene007964:intron | 15.0% |
| !! | TCTAAGAAAATAAGAAAAAA+GGG | - | chr3.3:62834686-62834705 | None:intergenic | 15.0% |
| !! | TTACTTATAAACTTCTTAAA+GGG | - | chr3.3:62832981-62833000 | None:intergenic | 15.0% |
| !! | TTTAATAGCTTTCTTAATTA+GGG | - | chr3.3:62832695-62832714 | None:intergenic | 15.0% |
| !! | TTTACTTATAAACTTCTTAA+AGG | - | chr3.3:62832982-62833001 | None:intergenic | 15.0% |
| !!! | AGTCTATTTAAAATATTTCA+AGG | + | chr3.3:62834996-62835015 | MS.gene007964:intron | 15.0% |
| !!! | CTTGACTTTTTTATAAATAA+CGG | - | chr3.3:62833854-62833873 | None:intergenic | 15.0% |
| !!! | TGAAAATCAAAAATCAATTT+TGG | + | chr3.3:62834313-62834332 | MS.gene007964:intron | 15.0% |
| !!! | TTCTAAGAAAATAAGAAAAA+AGG | - | chr3.3:62834687-62834706 | None:intergenic | 15.0% |
| !!! | TTGACTTTTTTATAAATAAC+GGG | - | chr3.3:62833853-62833872 | None:intergenic | 15.0% |
| !!! | TTTATTTGGATTTTGTTTTA+TGG | + | chr3.3:62832024-62832043 | MS.gene007964:intron | 15.0% |
| !!! | TTTTAATAGCTTTCTTAATT+AGG | - | chr3.3:62832696-62832715 | None:intergenic | 15.0% |
| !! | AAAAATAGCTTATACATAAG+TGG | - | chr3.3:62831397-62831416 | None:intergenic | 20.0% |
| !! | AATTTACAGTAAAGTACAAA+AGG | - | chr3.3:62834265-62834284 | None:intergenic | 20.0% |
| !! | AATTTCCAATAATAGATGAT+AGG | - | chr3.3:62834291-62834310 | None:intergenic | 20.0% |
| !! | ACAATCTAAATTAGGTTATA+CGG | - | chr3.3:62835777-62835796 | None:intergenic | 20.0% |
| !! | ATACATTTATACTTGACATA+TGG | - | chr3.3:62832297-62832316 | None:intergenic | 20.0% |
| !! | ATGTATTGAAAAACAAAAAC+TGG | + | chr3.3:62834452-62834471 | MS.gene007964:intron | 20.0% |
| !! | GAATAATTTAGTAATAACCT+TGG | - | chr3.3:62833459-62833478 | None:intergenic | 20.0% |
| !! | TATTTATAAAAAAGTCAAGC+AGG | + | chr3.3:62833855-62833874 | MS.gene007964:CDS | 20.0% |
| !! | TATTTCATTATATAAGGAGT+TGG | - | chr3.3:62833553-62833572 | None:intergenic | 20.0% |
| !! | TCATAAATCATAATAGATTC+TGG | + | chr3.3:62835048-62835067 | MS.gene007964:intron | 20.0% |
| !! | TTGAAAACACAATCTAAATT+AGG | - | chr3.3:62835785-62835804 | None:intergenic | 20.0% |
| !!! | AAAAAAAAAAGTGTTCCAAA+AGG | + | chr3.3:62833263-62833282 | MS.gene007964:CDS | 20.0% |
| !!! | TAAACTTGATAAATTTTCTC+TGG | + | chr3.3:62832953-62832972 | MS.gene007964:CDS | 20.0% |
| !!! | TATGCTTTTACTTCATTTTA+TGG | + | chr3.3:62832196-62832215 | MS.gene007964:intron | 20.0% |
| !!! | TTTGGAACACTTTTTTTTTT+AGG | - | chr3.3:62833263-62833282 | None:intergenic | 20.0% |
| !!! | TTTTCTAATTATTCGTTGTT+CGG | + | chr3.3:62832760-62832779 | MS.gene007964:intron | 20.0% |
| !!! | TTTTTTAATTCAGATTGCAA+GGG | - | chr3.3:62831676-62831695 | None:intergenic | 20.0% |
| !!! | TTTTTTTAATTCAGATTGCA+AGG | - | chr3.3:62831677-62831696 | None:intergenic | 20.0% |
| ! | AAATAATGAAGCTAACATTC+GGG | - | chr3.3:62834017-62834036 | None:intergenic | 25.0% |
| ! | AAATCTGTTATTAAAGCATG+TGG | + | chr3.3:62833735-62833754 | MS.gene007964:CDS | 25.0% |
| ! | AATCTGTTATTAAAGCATGT+GGG | + | chr3.3:62833736-62833755 | MS.gene007964:CDS | 25.0% |
| ! | ACAGCATTTAGATATCAAAA+TGG | - | chr3.3:62835232-62835251 | None:intergenic | 25.0% |
| ! | ACATCAATCTAAAGATGAAA+AGG | + | chr3.3:62832543-62832562 | MS.gene007964:CDS | 25.0% |
| ! | ATACAAATCTAACATCTTCT+GGG | - | chr3.3:62834541-62834560 | None:intergenic | 25.0% |
| ! | ATATGCATTCCATTATCAAA+GGG | + | chr3.3:62834055-62834074 | MS.gene007964:intron | 25.0% |
| ! | ATTTCAAATGACCCAAAAAA+AGG | - | chr3.3:62834571-62834590 | None:intergenic | 25.0% |
| ! | CAAAAACTGGAATATTTGAT+AGG | + | chr3.3:62834465-62834484 | MS.gene007964:intron | 25.0% |
| ! | CAAAGTTATGTTTAATGTGA+AGG | + | chr3.3:62833088-62833107 | MS.gene007964:intron | 25.0% |
| ! | CAAATAATGAAGCTAACATT+CGG | - | chr3.3:62834018-62834037 | None:intergenic | 25.0% |
| ! | CAATCTAAATTAGGTTATAC+GGG | - | chr3.3:62835776-62835795 | None:intergenic | 25.0% |
| ! | GATTTCAGAAATGTAACTTT+GGG | + | chr3.3:62832900-62832919 | MS.gene007964:intron | 25.0% |
| ! | GTATGAAATGACATAAAAAG+AGG | - | chr3.3:62831720-62831739 | None:intergenic | 25.0% |
| ! | TAAAAGAATAAAGGTCTGTT+TGG | - | chr3.3:62832008-62832027 | None:intergenic | 25.0% |
| ! | TAGAAATCAAAGAAGTAAAC+AGG | + | chr3.3:62834702-62834721 | MS.gene007964:intron | 25.0% |
| ! | TATACAAATCTAACATCTTC+TGG | - | chr3.3:62834542-62834561 | None:intergenic | 25.0% |
| ! | TATATGCATTCCATTATCAA+AGG | + | chr3.3:62834054-62834073 | MS.gene007964:intron | 25.0% |
| ! | TATCAAACAATCTTTAGACA+AGG | + | chr3.3:62831278-62831297 | MS.gene007964:intron | 25.0% |
| ! | TGATACTAAAGCAACTAAAA+AGG | + | chr3.3:62833175-62833194 | MS.gene007964:CDS | 25.0% |
| ! | TGATTTCAGAAATGTAACTT+TGG | + | chr3.3:62832899-62832918 | MS.gene007964:intron | 25.0% |
| ! | TTAGTCCTATCATCTATTAT+TGG | + | chr3.3:62834283-62834302 | MS.gene007964:intron | 25.0% |
| ! | TTTCAAATGACCCAAAAAAA+GGG | - | chr3.3:62834570-62834589 | None:intergenic | 25.0% |
| !! | CAGACCTTTATTCTTTTATT+TGG | + | chr3.3:62832010-62832029 | MS.gene007964:intron | 25.0% |
| !!! | AAGTTATAAGCTGTTTTCAT+AGG | + | chr3.3:62831456-62831475 | MS.gene007964:intron | 25.0% |
| !!! | ACTTTTTTATAAATAACGGG+AGG | - | chr3.3:62833850-62833869 | None:intergenic | 25.0% |
| !!! | AGTTATAAGCTGTTTTCATA+GGG | + | chr3.3:62831457-62831476 | MS.gene007964:intron | 25.0% |
| !!! | TGTATTTTTGTGCTTCTTAT+GGG | - | chr3.3:62833053-62833072 | None:intergenic | 25.0% |
| !!! | TGTGGATTTTAAAAATTACC+TGG | + | chr3.3:62832101-62832120 | MS.gene007964:intron | 25.0% |
| !!! | TTCCTCTGTATTTAAGATTT+TGG | - | chr3.3:62835816-62835835 | None:intergenic | 25.0% |
| !!! | TTTTTAGTTGCTTTAGTATC+AGG | - | chr3.3:62833176-62833195 | None:intergenic | 25.0% |
| AAAAAGATCTTCATACCTCA+AGG | + | chr3.3:62832714-62832733 | MS.gene007964:CDS | 30.0% | |
| AAGCTATAAGCTACTTGAAT+TGG | - | chr3.3:62831630-62831649 | None:intergenic | 30.0% | |
| AAGCTATCTTGGAGAAATTA+TGG | + | chr3.3:62831891-62831910 | MS.gene007964:intron | 30.0% | |
| AATAATGAAGCTAACATTCG+GGG | - | chr3.3:62834016-62834035 | None:intergenic | 30.0% | |
| AATCTAAGTCCTAAATACAG+AGG | - | chr3.3:62835432-62835451 | None:intergenic | 30.0% | |
| ACTCCAGTATTTGCAAATAA+AGG | + | chr3.3:62834490-62834509 | MS.gene007964:intron | 30.0% | |
| AGAAGAGAAAGAAACAAACT+CGG | - | chr3.3:62831100-62831119 | None:intergenic | 30.0% | |
| AGCCAAAATCTTAAATACAG+AGG | + | chr3.3:62835811-62835830 | MS.gene007964:intron | 30.0% | |
| AGGAAAAGCTTTCAATTGTT+TGG | - | chr3.3:62834133-62834152 | None:intergenic | 30.0% | |
| ATAAAATGAGACCATATCAG+TGG | - | chr3.3:62834636-62834655 | None:intergenic | 30.0% | |
| ATAACCTTGTAAGAAAGTGA+CGG | - | chr3.3:62831570-62831589 | None:intergenic | 30.0% | |
| ATATCAAAATGGAGCTATAC+AGG | - | chr3.3:62835221-62835240 | None:intergenic | 30.0% | |
| ATCACCCATGAAAAATATGA+GGG | - | chr3.3:62835692-62835711 | None:intergenic | 30.0% | |
| CATTCTCTATTATTGGAGTT+AGG | + | chr3.3:62834376-62834395 | MS.gene007964:intron | 30.0% | |
| CGGACAACTAATTAAAGAAT+TGG | + | chr3.3:62833897-62833916 | MS.gene007964:CDS | 30.0% | |
| CTAACTCCAATAATAGAGAA+TGG | - | chr3.3:62834378-62834397 | None:intergenic | 30.0% | |
| CTCCAGTATTTGCAAATAAA+GGG | + | chr3.3:62834491-62834510 | MS.gene007964:intron | 30.0% | |
| GAAGAAATACTATCTAGAGA+AGG | + | chr3.3:62833919-62833938 | MS.gene007964:CDS | 30.0% | |
| GATGTTTAATTGCTTGGATA+GGG | + | chr3.3:62835118-62835137 | MS.gene007964:intron | 30.0% | |
| GGAAAAGCTTTCAATTGTTT+GGG | - | chr3.3:62834132-62834151 | None:intergenic | 30.0% | |
| TAAATACAGAGGAAGAAATG+AGG | - | chr3.3:62835841-62835822 | None:intergenic | 30.0% | |
| TAAGATCTTCCTCCAATAAT+CGG | - | chr3.3:62832935-62832954 | None:intergenic | 30.0% | |
| TACAAATCTAACATCTTCTG+GGG | - | chr3.3:62834540-62834559 | None:intergenic | 30.0% | |
| TAGCTGAAGAAACTTATTGT+TGG | + | chr3.3:62832160-62832179 | MS.gene007964:intron | 30.0% | |
| TATAAGTAAAGAGCTTGATG+AGG | + | chr3.3:62832992-62833011 | MS.gene007964:CDS | 30.0% | |
| TATATGTGATGAAGAATGCT+TGG | + | chr3.3:62832373-62832392 | MS.gene007964:intron | 30.0% | |
| TATCAAAATGGAGCTATACA+GGG | - | chr3.3:62835220-62835239 | None:intergenic | 30.0% | |
| TATGCATTCCATTATCAAAG+GGG | + | chr3.3:62834056-62834075 | MS.gene007964:intron | 30.0% | |
| TCATTTCTTCCTCTGTATTT+AGG | + | chr3.3:62835420-62835439 | MS.gene007964:intron | 30.0% | |
| TCCAGTATTTGCAAATAAAG+GGG | + | chr3.3:62834492-62834511 | MS.gene007964:intron | 30.0% | |
| TCTGTTGATGTTTAATTGCT+TGG | + | chr3.3:62835112-62835131 | MS.gene007964:intron | 30.0% | |
| TCTTCCAAAACAAAAGATTG+AGG | - | chr3.3:62835570-62835589 | None:intergenic | 30.0% | |
| TGAGAGTGAAGAATTTAATG+CGG | + | chr3.3:62834970-62834989 | MS.gene007964:CDS | 30.0% | |
| TGATGAAAGATTTCAGTTTC+AGG | + | chr3.3:62835708-62835727 | MS.gene007964:intron | 30.0% | |
| TGATGTTTAATTGCTTGGAT+AGG | + | chr3.3:62835117-62835136 | MS.gene007964:intron | 30.0% | |
| TTACTGCACAAAAAAAAACC+CGG | - | chr3.3:62834171-62834190 | None:intergenic | 30.0% | |
| TTCTTAATTAGGGTCTCATT+TGG | - | chr3.3:62832685-62832704 | None:intergenic | 30.0% | |
| TTGAGGTTGCTAATCAATTA+AGG | - | chr3.3:62835339-62835358 | None:intergenic | 30.0% | |
| TTGGTTGAATTTGTAGTGTT+TGG | - | chr3.3:62831771-62831790 | None:intergenic | 30.0% | |
| TTTATTAGGTCCATGTATTC+AGG | + | chr3.3:62835298-62835317 | MS.gene007964:intron | 30.0% | |
| ! | AAAGTGCCATTCTCTATTAT+TGG | + | chr3.3:62834369-62834388 | MS.gene007964:intron | 30.0% |
| ! | GATGAGGTGATTTTCTATTT+TGG | + | chr3.3:62833758-62833777 | MS.gene007964:intron | 30.0% |
| !! | AAGGGTTTTTCAAAGGAAAA+AGG | - | chr3.3:62831314-62831333 | None:intergenic | 30.0% |
| !! | ATTAATGTCTTCTGAAGTTC+CGG | + | chr3.3:62833112-62833131 | MS.gene007964:CDS | 30.0% |
| !! | GGAAAACAGTCTAAAACTTT+TGG | + | chr3.3:62831956-62831975 | MS.gene007964:intron | 30.0% |
| !! | GTGTATTTTTGTGCTTCTTA+TGG | - | chr3.3:62833054-62833073 | None:intergenic | 30.0% |
| !! | TTCTGAAGTTCAAGGAAAAA+AGG | - | chr3.3:62833663-62833682 | None:intergenic | 30.0% |
| !! | TTGGAATAAGGGTTTTTCAA+AGG | - | chr3.3:62831321-62831340 | None:intergenic | 30.0% |
| !!! | GTATAGTAGTCCCTTTTTTT+GGG | + | chr3.3:62834557-62834576 | MS.gene007964:intron | 30.0% |
| !!! | TGTATAGTAGTCCCTTTTTT+TGG | + | chr3.3:62834556-62834575 | MS.gene007964:intron | 30.0% |
| AAAAAAAACCCGGATCAAAC+TGG | - | chr3.3:62834161-62834180 | None:intergenic | 35.0% | |
| AAGAAGACGGTTAAAGAAGT+CGG | - | chr3.3:62835886-62835905 | None:intergenic | 35.0% | |
| AAGCTCAAAGATATAGAACG+TGG | - | chr3.3:62835196-62835215 | None:intergenic | 35.0% | |
| AGATGAAGAAGATGAAGAAG+AGG | + | chr3.3:62834922-62834941 | MS.gene007964:CDS | 35.0% | |
| AGATTGCTCGAGAAAGATTT+AGG | + | chr3.3:62831219-62831238 | MS.gene007964:intron | 35.0% | |
| AGCTCAAAGATATAGAACGT+GGG | - | chr3.3:62835195-62835214 | None:intergenic | 35.0% | |
| AGGAAGAAATGAGTTGTACT+TGG | + | chr3.3:62835831-62835850 | MS.gene007964:intron | 35.0% | |
| AGGTCTGCTTAAAGAACAAA+AGG | + | chr3.3:62832609-62832628 | MS.gene007964:CDS | 35.0% | |
| ATCATCCTCAACAAAGAACT+AGG | - | chr3.3:62833795-62833814 | None:intergenic | 35.0% | |
| CAAAGAAGTAAACAGGAAGA+AGG | + | chr3.3:62834709-62834728 | MS.gene007964:CDS | 35.0% | |
| CAACAAAGAACTAGGAACAT+AGG | - | chr3.3:62833787-62833806 | None:intergenic | 35.0% | |
| CAACTTAATGCAGCAAACAT+TGG | - | chr3.3:62834594-62834613 | None:intergenic | 35.0% | |
| CAATCTAAGTCCTGAATACA+TGG | - | chr3.3:62835311-62835330 | None:intergenic | 35.0% | |
| CAGCACATTTAAAGAATCTC+TGG | + | chr3.3:62835643-62835662 | MS.gene007964:intron | 35.0% | |
| CATCACCCATGAAAAATATG+AGG | - | chr3.3:62835693-62835712 | None:intergenic | 35.0% | |
| CTATCATCACTAGATGAAAG+TGG | - | chr3.3:62832339-62832358 | None:intergenic | 35.0% | |
| GAATAAAGGTCTGTTTGGAT+TGG | - | chr3.3:62832003-62832022 | None:intergenic | 35.0% | |
| GACATATGGTAACCAAAGTT+TGG | - | chr3.3:62832283-62832302 | None:intergenic | 35.0% | |
| GAGGTGTATCTATATGTACT+TGG | - | chr3.3:62835402-62835421 | None:intergenic | 35.0% | |
| GATAATGACAACGATGATGA+AGG | + | chr3.3:62834875-62834894 | MS.gene007964:CDS | 35.0% | |
| GATTGCTCGAGAAAGATTTA+GGG | + | chr3.3:62831220-62831239 | MS.gene007964:intron | 35.0% | |
| GGTCTGCTTAAAGAACAAAA+GGG | + | chr3.3:62832610-62832629 | MS.gene007964:CDS | 35.0% | |
| GTCTGCTTAAAGAACAAAAG+GGG | + | chr3.3:62832611-62832630 | MS.gene007964:CDS | 35.0% | |
| GTTGTCATTATCACTACCTT+TGG | - | chr3.3:62834867-62834886 | None:intergenic | 35.0% | |
| TAAGTAGTCTCAGACAAACA+TGG | + | chr3.3:62834410-62834429 | MS.gene007964:intron | 35.0% | |
| TCACCCATGAAAAATATGAG+GGG | - | chr3.3:62835691-62835710 | None:intergenic | 35.0% | |
| TCTGCTTAAAGAACAAAAGG+GGG | + | chr3.3:62832612-62832631 | MS.gene007964:CDS | 35.0% | |
| TCTTCAAATCCATCTGAGAA+GGG | + | chr3.3:62833946-62833965 | MS.gene007964:CDS | 35.0% | |
| TCTTCTCTATGACAACAAGT+TGG | + | chr3.3:62835922-62835941 | MS.gene007964:intron | 35.0% | |
| TCTTTAAGCAGACCTAATAC+CGG | - | chr3.3:62832604-62832623 | None:intergenic | 35.0% | |
| TGTATTCAGCTTAAGTGAAG+AGG | - | chr3.3:62832239-62832258 | None:intergenic | 35.0% | |
| TTAACCGTCTTCTTTAACTC+TGG | + | chr3.3:62835892-62835911 | MS.gene007964:intron | 35.0% | |
| TTATACATATGCGTTTGCGT+TGG | - | chr3.3:62831340-62831359 | None:intergenic | 35.0% | |
| TTATTAAAGCATGTGGGATG+AGG | + | chr3.3:62833742-62833761 | MS.gene007964:CDS | 35.0% | |
| ! | ATGTTCCTAGTTCTTTGTTG+AGG | + | chr3.3:62833787-62833806 | MS.gene007964:intron | 35.0% |
| ! | ATTTTCTTAGCACTTTCTGC+AGG | - | chr3.3:62833140-62833159 | None:intergenic | 35.0% |
| ! | TAGAGAATGGCACTTTTACA+TGG | - | chr3.3:62834365-62834384 | None:intergenic | 35.0% |
| ! | TCCCCTTTATTTGCAAATAC+TGG | - | chr3.3:62834496-62834515 | None:intergenic | 35.0% |
| ! | TGTTTTGTGTGACCAAACTT+TGG | + | chr3.3:62832268-62832287 | MS.gene007964:intron | 35.0% |
| !! | CTTGTTTCTTCTGAAGTTCA+AGG | - | chr3.3:62833671-62833690 | None:intergenic | 35.0% |
| !! | GCAACCTCAATCTTTTGTTT+TGG | + | chr3.3:62835563-62835582 | MS.gene007964:intron | 35.0% |
| !! | GCTGTTTTCATAAGCTATCT+TGG | + | chr3.3:62831880-62831899 | MS.gene007964:intron | 35.0% |
| !! | TCATCTCCTTTACGCTTTTT+GGG | - | chr3.3:62833311-62833330 | None:intergenic | 35.0% |
| !!! | TGCTGAAAAGTTGGTTTTTC+TGG | + | chr3.3:62832069-62832088 | MS.gene007964:intron | 35.0% |
| !!! | TTTTTCTGGCTGTTTTTGTG+TGG | + | chr3.3:62832083-62832102 | MS.gene007964:intron | 35.0% |
| AAAAACTCACCCTTCTCAGA+TGG | - | chr3.3:62833958-62833977 | None:intergenic | 40.0% | |
| AAGATTCCAGTGGAAACTAG+TGG | + | chr3.3:62834833-62834852 | MS.gene007964:CDS | 40.0% | |
| AAGTAAACAGGAAGAAGGCA+CGG | + | chr3.3:62834714-62834733 | MS.gene007964:CDS | 40.0% | |
| AATAGTGATGCAGAAGACGA+TGG | + | chr3.3:62833386-62833405 | MS.gene007964:CDS | 40.0% | |
| ACCCATGAAAAATATGAGGG+GGG | - | chr3.3:62835689-62835708 | None:intergenic | 40.0% | |
| ACTAGTGGCAAAGATACCAA+AGG | + | chr3.3:62834848-62834867 | MS.gene007964:CDS | 40.0% | |
| ACTGCTTAACCACTGCAAAA+AGG | - | chr3.3:62835093-62835112 | None:intergenic | 40.0% | |
| AGTATTCTCTGCTGACGAAT+GGG | - | chr3.3:62833435-62833454 | None:intergenic | 40.0% | |
| ATCAATACCCTCAAGTTCCT+TGG | - | chr3.3:62834741-62834760 | None:intergenic | 40.0% | |
| ATGCGTTTGCGTTGGAATAA+GGG | - | chr3.3:62831332-62831351 | None:intergenic | 40.0% | |
| ATGGAAGATTCTCCGGTATT+AGG | + | chr3.3:62832589-62832608 | MS.gene007964:CDS | 40.0% | |
| ATTATCAAAGGGGATCTTGG+AGG | + | chr3.3:62834066-62834085 | MS.gene007964:intron | 40.0% | |
| CAATCTACCCAGCAAGAAAA+AGG | + | chr3.3:62833334-62833353 | MS.gene007964:CDS | 40.0% | |
| CACCCATGAAAAATATGAGG+GGG | - | chr3.3:62835690-62835709 | None:intergenic | 40.0% | |
| CCAACTATCTTATCCGCTAT+AGG | + | chr3.3:62831787-62831806 | MS.gene007964:intron | 40.0% | |
| CTAGTTTCCACTGGAATCTT+GGG | - | chr3.3:62834833-62834852 | None:intergenic | 40.0% | |
| CTGCTTAAAGAACAAAAGGG+GGG | + | chr3.3:62832613-62832632 | MS.gene007964:CDS | 40.0% | |
| CTTGGATAGGGTAAGCAATA+TGG | + | chr3.3:62835130-62835149 | MS.gene007964:intron | 40.0% | |
| GGAGAAAATGGAAGATTCTC+CGG | + | chr3.3:62832582-62832601 | MS.gene007964:CDS | 40.0% | |
| GGGTAAGCAATATGGATAGT+TGG | + | chr3.3:62835138-62835157 | MS.gene007964:intron | 40.0% | |
| GGGTTGTGTGAGAGATAATT+GGG | - | chr3.3:62834112-62834131 | None:intergenic | 40.0% | |
| GTCTTCAAATCCATCTGAGA+AGG | + | chr3.3:62833945-62833964 | MS.gene007964:CDS | 40.0% | |
| TAGTATTCTCTGCTGACGAA+TGG | - | chr3.3:62833436-62833455 | None:intergenic | 40.0% | |
| TATGCGTTTGCGTTGGAATA+AGG | - | chr3.3:62831333-62831352 | None:intergenic | 40.0% | |
| TCCAAGATCCCCTTTGATAA+TGG | - | chr3.3:62834067-62834086 | None:intergenic | 40.0% | |
| TCCATTATCAAAGGGGATCT+TGG | + | chr3.3:62834063-62834082 | MS.gene007964:intron | 40.0% | |
| TCTGATTCATGCAGATGAAG+AGG | + | chr3.3:62836007-62836026 | MS.gene007964:intron | 40.0% | |
| TGAAGAAGATGAAGAAGAGG+AGG | + | chr3.3:62834925-62834944 | MS.gene007964:CDS | 40.0% | |
| TGAAGGCAAAGAAAATGACG+AGG | + | chr3.3:62834892-62834911 | MS.gene007964:CDS | 40.0% | |
| TGCACCAGAGTTAAAGAAGA+CGG | - | chr3.3:62835899-62835918 | None:intergenic | 40.0% | |
| TGGGTTGTGTGAGAGATAAT+TGG | - | chr3.3:62834113-62834132 | None:intergenic | 40.0% | |
| TGTGTCAAGTACACGTAGAA+GGG | + | chr3.3:62834772-62834791 | MS.gene007964:CDS | 40.0% | |
| TTCAGATGAAGAGAGTGAAG+AGG | + | chr3.3:62833223-62833242 | MS.gene007964:CDS | 40.0% | |
| TTCTGCTGTTGCTGAAAAGT+TGG | + | chr3.3:62832060-62832079 | MS.gene007964:intron | 40.0% | |
| TTGTGTCAAGTACACGTAGA+AGG | + | chr3.3:62834771-62834790 | MS.gene007964:CDS | 40.0% | |
| ! | ACCCCCCTCATATTTTTCAT+GGG | + | chr3.3:62835685-62835704 | MS.gene007964:intron | 40.0% |
| ! | ACTAGTTTCCACTGGAATCT+TGG | - | chr3.3:62834834-62834853 | None:intergenic | 40.0% |
| ! | AGGGTTTGACGAGTTTTCTT+TGG | + | chr3.3:62831239-62831258 | MS.gene007964:intron | 40.0% |
| ! | CCATTTTCTCCTCATCTTCA+GGG | - | chr3.3:62832573-62832592 | None:intergenic | 40.0% |
| ! | CTAACCGTCACTTTCTTACA+AGG | + | chr3.3:62831563-62831582 | MS.gene007964:intron | 40.0% |
| ! | CTGCACTGCTTTCATTTTGT+TGG | + | chr3.3:62835021-62835040 | MS.gene007964:intron | 40.0% |
| ! | CTGTTTTCATAGGGTCTGTT+TGG | + | chr3.3:62831466-62831485 | MS.gene007964:intron | 40.0% |
| ! | CTTTTTCTTGCTGGGTAGAT+TGG | - | chr3.3:62833336-62833355 | None:intergenic | 40.0% |
| ! | GAAAGTACACAAGAGACTGA+AGG | + | chr3.3:62832508-62832527 | MS.gene007964:CDS | 40.0% |
| ! | GTCATCTCCTTTACGCTTTT+TGG | - | chr3.3:62833312-62833331 | None:intergenic | 40.0% |
| ! | TCCATTTTCTCCTCATCTTC+AGG | - | chr3.3:62832574-62832593 | None:intergenic | 40.0% |
| ! | TCCTGTTTTCCAGTTTGATC+CGG | + | chr3.3:62834149-62834168 | MS.gene007964:intron | 40.0% |
| ! | TTACCTGGCTTGTCAAATAC+CGG | + | chr3.3:62832116-62832135 | MS.gene007964:intron | 40.0% |
| ! | TTCTCTAGTCCTTTTTGCAG+TGG | + | chr3.3:62835081-62835100 | MS.gene007964:intron | 40.0% |
| !! | CCTATAGCGGATAAGATAGT+TGG | - | chr3.3:62831790-62831809 | None:intergenic | 40.0% |
| !! | TCTTCTGATGCTGCTTTATC+AGG | - | chr3.3:62833365-62833384 | None:intergenic | 40.0% |
| !! | TGAACGAAGTCGCTGTTTTA+TGG | + | chr3.3:62831935-62831954 | MS.gene007964:intron | 40.0% |
| !! | TTATTTCTGCCACAGTGCTT+AGG | + | chr3.3:62832427-62832446 | MS.gene007964:intron | 40.0% |
| !!! | AAGGGCAACGATTAGTTTTG+CGG | + | chr3.3:62834790-62834809 | MS.gene007964:CDS | 40.0% |
| AAAGGATCTCCCTGAAGATG+AGG | + | chr3.3:62832561-62832580 | MS.gene007964:CDS | 45.0% | |
| ACAAGAGACTGAAGGACAGA+AGG | + | chr3.3:62832516-62832535 | MS.gene007964:CDS | 45.0% | |
| ACCAAGATAGCAGAAGGCAA+TGG | + | chr3.3:62832646-62832665 | MS.gene007964:CDS | 45.0% | |
| AGCAGGTCCCTGAAAACAAA+CGG | + | chr3.3:62833872-62833891 | MS.gene007964:CDS | 45.0% | |
| AGGCAAAGAAAATGACGAGG+AGG | + | chr3.3:62834895-62834914 | MS.gene007964:CDS | 45.0% | |
| CAAGGAACCAAGATAGCAGA+AGG | + | chr3.3:62832640-62832659 | MS.gene007964:CDS | 45.0% | |
| CCAAGATAGCAGAAGGCAAT+GGG | + | chr3.3:62832647-62832666 | MS.gene007964:CDS | 45.0% | |
| CCCTGAAGATGAGGAGAAAA+TGG | + | chr3.3:62832570-62832589 | MS.gene007964:CDS | 45.0% | |
| CGTTTACTGTACACAGGAGT+TGG | - | chr3.3:62833702-62833721 | None:intergenic | 45.0% | |
| GAACAAAAGGGGGGTAAACA+AGG | + | chr3.3:62832622-62832641 | MS.gene007964:CDS | 45.0% | |
| GGCTTGTCAAATACCGGAAA+TGG | + | chr3.3:62832122-62832141 | MS.gene007964:intron | 45.0% | |
| GTCAGCAGAGAATACTACCA+AGG | + | chr3.3:62833439-62833458 | MS.gene007964:CDS | 45.0% | |
| TCCACACGTTTACTGTACAC+AGG | - | chr3.3:62833708-62833727 | None:intergenic | 45.0% | |
| TCCTGTGTACAGTAAACGTG+TGG | + | chr3.3:62833704-62833723 | MS.gene007964:CDS | 45.0% | |
| TGATGCTACAGCCACTGATA+TGG | + | chr3.3:62834622-62834641 | MS.gene007964:intron | 45.0% | |
| TGTCAAATACCGGAAATGGC+AGG | + | chr3.3:62832126-62832145 | MS.gene007964:intron | 45.0% | |
| TGTGCGTGTTCAGCATATTG+AGG | - | chr3.3:62835356-62835375 | None:intergenic | 45.0% | |
| TTAGCACTTTCTGCAGGTTC+CGG | - | chr3.3:62833134-62833153 | None:intergenic | 45.0% | |
| TTTCCGGTATTTGACAAGCC+AGG | - | chr3.3:62832122-62832141 | None:intergenic | 45.0% | |
| ! | AGGCTTGACCTTTTTCTTGC+TGG | - | chr3.3:62833345-62833364 | None:intergenic | 45.0% |
| ! | AGTAAACAGGAAGAAGGCAC+GGG | + | chr3.3:62834715-62834734 | MS.gene007964:CDS | 45.0% |
| ! | CCTGTTTTCCAGTTTGATCC+GGG | + | chr3.3:62834150-62834169 | MS.gene007964:intron | 45.0% |
| ! | GACCCCCCTCATATTTTTCA+TGG | + | chr3.3:62835684-62835703 | MS.gene007964:intron | 45.0% |
| ! | GCAGATAAGCTAGCCTATAG+CGG | - | chr3.3:62831803-62831822 | None:intergenic | 45.0% |
| ! | GGCTTGACCTTTTTCTTGCT+GGG | - | chr3.3:62833344-62833363 | None:intergenic | 45.0% |
| ! | GTTGGACCCAAAAAGCGTAA+AGG | + | chr3.3:62833302-62833321 | MS.gene007964:CDS | 45.0% |
| ! | TAGTCTTCGCCGATTATTGG+AGG | + | chr3.3:62832923-62832942 | MS.gene007964:CDS | 45.0% |
| ! | TCTTTGCCACTAGTTTCCAC+TGG | - | chr3.3:62834842-62834861 | None:intergenic | 45.0% |
| !! | CATACTCTGCATTAGCCTTG+AGG | - | chr3.3:62832732-62832751 | None:intergenic | 45.0% |
| !!! | TTACGCTTTTTGGGTCCAAC+AGG | - | chr3.3:62833302-62833321 | None:intergenic | 45.0% |
| !!! | TTTTATCTTTATATTTTTAT+TGG | + | chr3.3:62834650-62834669 | MS.gene007964:intron | 5.0% |
| ACAAAGACGTCTGAGGAGGA+CGG | + | chr3.3:62832475-62832494 | MS.gene007964:CDS | 50.0% | |
| ACCAAAGCCCAAGATTCCAG+TGG | + | chr3.3:62834823-62834842 | MS.gene007964:CDS | 50.0% | |
| AGAGACTGAAGGACAGAAGG+AGG | + | chr3.3:62832519-62832538 | MS.gene007964:CDS | 50.0% | |
| AGAGGAGGATAGCAGTGATG+AGG | + | chr3.3:62834940-62834959 | MS.gene007964:CDS | 50.0% | |
| ATACCGGAAATGGCAGGTCA+TGG | + | chr3.3:62832132-62832151 | MS.gene007964:intron | 50.0% | |
| CAAACATGGCTGCACAGAGA+TGG | + | chr3.3:62834424-62834443 | MS.gene007964:intron | 50.0% | |
| CCCATTGCCTTCTGCTATCT+TGG | - | chr3.3:62832650-62832669 | None:intergenic | 50.0% | |
| CCCGGATCAAACTGGAAAAC+AGG | - | chr3.3:62834153-62834172 | None:intergenic | 50.0% | |
| GAGGATAGCAGTGATGAGGA+TGG | + | chr3.3:62834944-62834963 | MS.gene007964:CDS | 50.0% | |
| GCAGGTCCCTGAAAACAAAC+GGG | + | chr3.3:62833873-62833892 | MS.gene007964:CDS | 50.0% | |
| GTCCCTGAAAACAAACGGGA+CGG | + | chr3.3:62833877-62833896 | MS.gene007964:CDS | 50.0% | |
| TACCGGAAATGGCAGGTCAT+GGG | + | chr3.3:62832133-62832152 | MS.gene007964:intron | 50.0% | |
| TCCACTGGAATCTTGGGCTT+TGG | - | chr3.3:62834827-62834846 | None:intergenic | 50.0% | |
| TGATGCCACAAAGACGTCTG+AGG | + | chr3.3:62832468-62832487 | MS.gene007964:CDS | 50.0% | |
| ! | ACTGGAATCTTGGGCTTTGG+TGG | - | chr3.3:62834824-62834843 | None:intergenic | 50.0% |
| ! | GGAGTCTGCATCTTGCCTTT+TGG | - | chr3.3:62833281-62833300 | None:intergenic | 50.0% |
| ! | GGGTAGTCTTCGCCGATTAT+TGG | + | chr3.3:62832920-62832939 | MS.gene007964:CDS | 50.0% |
| !! | GTCCGTCCCGTTTGTTTTCA+GGG | - | chr3.3:62833882-62833901 | None:intergenic | 50.0% |
| !! | TGTCCGTCCCGTTTGTTTTC+AGG | - | chr3.3:62833883-62833902 | None:intergenic | 50.0% |
| AAAGACGTCTGAGGAGGACG+GGG | + | chr3.3:62832477-62832496 | MS.gene007964:CDS | 55.0% | |
| CAAAGACGTCTGAGGAGGAC+GGG | + | chr3.3:62832476-62832495 | MS.gene007964:CDS | 55.0% | |
| GGCAAGATGCAGACTCCTGT+TGG | + | chr3.3:62833284-62833303 | MS.gene007964:CDS | 55.0% | |
| GTCCTCCTCAGACGTCTTTG+TGG | - | chr3.3:62832476-62832495 | None:intergenic | 55.0% | |
| TCTGAGGAGGACGGGGAAAA+AGG | + | chr3.3:62832484-62832503 | MS.gene007964:CDS | 55.0% | |
| TCTGCCACAGTGCTTAGGAG+AGG | + | chr3.3:62832432-62832451 | MS.gene007964:intron | 55.0% | |
| TGCCACAAAGACGTCTGAGG+AGG | + | chr3.3:62832471-62832490 | MS.gene007964:CDS | 55.0% | |
| ! | GGAATCTTGGGCTTTGGTGG+TGG | - | chr3.3:62834821-62834840 | None:intergenic | 55.0% |
| ! | TGCCCATGACCTGCCATTTC+CGG | - | chr3.3:62832138-62832157 | None:intergenic | 55.0% |
| !! | ATCTTGGGCTTTGGTGGTGG+AGG | - | chr3.3:62834818-62834837 | None:intergenic | 55.0% |
| CCACAGTGCTTAGGAGAGGC+TGG | + | chr3.3:62832436-62832455 | MS.gene007964:intron | 60.0% | |
| GCACGGGCCAAGGAACTTGA+GGG | + | chr3.3:62834731-62834750 | MS.gene007964:CDS | 60.0% | |
| ! | AGAAACGCGAGAGCGCATGG+CGG | - | chr3.3:62831061-62831080 | None:intergenic | 60.0% |
| ! | CCAGCCTCTCCTAAGCACTG+TGG | - | chr3.3:62832439-62832458 | None:intergenic | 60.0% |
| ! | GTGAGAAACGCGAGAGCGCA+TGG | - | chr3.3:62831064-62831083 | None:intergenic | 60.0% |
| GGCACGGGCCAAGGAACTTG+AGG | + | chr3.3:62834730-62834749 | MS.gene007964:CDS | 65.0% | |
| ! | CAGGAAGAAGGCACGGGCCA+AGG | + | chr3.3:62834721-62834740 | MS.gene007964:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.3 | gene | 62830994 | 62836040 | 62830994 | ID=MS.gene007964 |
| chr3.3 | mRNA | 62830994 | 62836040 | 62830994 | ID=MS.gene007964.t1;Parent=MS.gene007964 |
| chr3.3 | exon | 62830994 | 62831074 | 62830994 | ID=MS.gene007964.t1.exon1;Parent=MS.gene007964.t1 |
| chr3.3 | CDS | 62830994 | 62831074 | 62830994 | ID=cds.MS.gene007964.t1;Parent=MS.gene007964.t1 |
| chr3.3 | exon | 62832442 | 62832746 | 62832442 | ID=MS.gene007964.t1.exon2;Parent=MS.gene007964.t1 |
| chr3.3 | CDS | 62832442 | 62832746 | 62832442 | ID=cds.MS.gene007964.t1;Parent=MS.gene007964.t1 |
| chr3.3 | exon | 62832908 | 62833013 | 62832908 | ID=MS.gene007964.t1.exon3;Parent=MS.gene007964.t1 |
| chr3.3 | CDS | 62832908 | 62833013 | 62832908 | ID=cds.MS.gene007964.t1;Parent=MS.gene007964.t1 |
| chr3.3 | exon | 62833110 | 62833460 | 62833110 | ID=MS.gene007964.t1.exon4;Parent=MS.gene007964.t1 |
| chr3.3 | CDS | 62833110 | 62833460 | 62833110 | ID=cds.MS.gene007964.t1;Parent=MS.gene007964.t1 |
| chr3.3 | exon | 62833681 | 62833763 | 62833681 | ID=MS.gene007964.t1.exon5;Parent=MS.gene007964.t1 |
| chr3.3 | CDS | 62833681 | 62833763 | 62833681 | ID=cds.MS.gene007964.t1;Parent=MS.gene007964.t1 |
| chr3.3 | exon | 62833843 | 62833967 | 62833843 | ID=MS.gene007964.t1.exon6;Parent=MS.gene007964.t1 |
| chr3.3 | CDS | 62833843 | 62833967 | 62833843 | ID=cds.MS.gene007964.t1;Parent=MS.gene007964.t1 |
| chr3.3 | exon | 62834705 | 62834992 | 62834705 | ID=MS.gene007964.t1.exon7;Parent=MS.gene007964.t1 |
| chr3.3 | CDS | 62834705 | 62834992 | 62834705 | ID=cds.MS.gene007964.t1;Parent=MS.gene007964.t1 |
| chr3.3 | exon | 62836021 | 62836040 | 62836021 | ID=MS.gene007964.t1.exon8;Parent=MS.gene007964.t1 |
| chr3.3 | CDS | 62836021 | 62836040 | 62836021 | ID=cds.MS.gene007964.t1;Parent=MS.gene007964.t1 |
| Gene Sequence |
| Protein sequence |
