Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene031884.t1 | XP_003601051.1 | 81.5 | 464 | 51 | 2 | 1 | 460 | 1 | 433 | 2.90E-135 | 492.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene031884.t1 | G7J309 | 81.5 | 464 | 51 | 2 | 1 | 460 | 1 | 433 | 2.1e-135 | 492.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene007964 | MS.gene031884 | PPI |
| MS.gene039956 | MS.gene031884 | PPI |
| MS.gene031884 | MS.gene99887 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene031884.t1 | MTR_3g072480 | 88.512 | 531 | 25 | 3 | 1 | 527 | 1 | 499 | 0.0 | 824 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene031884.t1 | AT1G44780 | 43.348 | 466 | 190 | 11 | 10 | 470 | 17 | 413 | 1.03e-95 | 298 |
| MS.gene031884.t1 | AT1G44780 | 43.133 | 466 | 192 | 10 | 10 | 470 | 17 | 414 | 1.97e-95 | 298 |
| MS.gene031884.t1 | AT4G08310 | 44.323 | 458 | 201 | 11 | 16 | 468 | 34 | 442 | 1.61e-91 | 289 |
Find 103 sgRNAs with CRISPR-Local
Find 281 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGATTGCTCGAGAAAGATTT+AGG | 0.188651 | 3.4:+71322144 | MS.gene031884:CDS |
| TTTACTTATAAACTTCTTAA+AGG | 0.192372 | 3.4:-71323917 | None:intergenic |
| TCTTCTGATGCTGCTTTATC+AGG | 0.212935 | 3.4:-71324300 | None:intergenic |
| CCCATTGCCTTCAGCTATCT+TGG | 0.230905 | 3.4:-71323585 | None:intergenic |
| CCCTGAAGATGAGGAGAAAA+TGG | 0.258537 | 3.4:+71323508 | MS.gene031884:CDS |
| TTTAATAGCTTTCTTAATTA+GGG | 0.269138 | 3.4:-71323630 | None:intergenic |
| TCTGAGGAGGGCGGGGAAAA+AGG | 0.296429 | 3.4:+71323422 | MS.gene031884:CDS |
| TAGAAATCAAAGAAGTAAAT+AGG | 0.302925 | 3.4:+71325630 | MS.gene031884:intron |
| TCCACTGGAATCTTGGGCTT+TGG | 0.303298 | 3.4:-71325752 | None:intergenic |
| GGGTAGTCTTCGCCGATTAT+TGG | 0.304072 | 3.4:+71323858 | MS.gene031884:CDS |
| ACTAGTTTCCACTGGAATCT+TGG | 0.310141 | 3.4:-71325759 | None:intergenic |
| CTAGTTTCCACTGGAATCTT+GGG | 0.332663 | 3.4:-71325758 | None:intergenic |
| GGAGTCTGCATCTTGCCTTT+TGG | 0.346161 | 3.4:-71324216 | None:intergenic |
| CGGACAACTAATTAAAGAAT+TGG | 0.355478 | 3.4:+71324835 | MS.gene031884:CDS |
| ATGGAAGATTCTCCGGTATT+AGG | 0.360072 | 3.4:+71323527 | MS.gene031884:CDS |
| TTAGCACTTTCTGCAGGTTC+CGG | 0.360550 | 3.4:-71324069 | None:intergenic |
| TTACTTATAAACTTCTTAAA+GGG | 0.364968 | 3.4:-71323916 | None:intergenic |
| ATTAATGTCTTCTGAAGTTC+CGG | 0.373428 | 3.4:+71324050 | MS.gene031884:CDS |
| TAAGATCTTCCTCCAATAAT+CGG | 0.374296 | 3.4:-71323870 | None:intergenic |
| TTCTTAATTAGGGTCTCATT+TGG | 0.378832 | 3.4:-71323620 | None:intergenic |
| GGAATCTTGGGCTTTGGTGG+TGG | 0.379600 | 3.4:-71325746 | None:intergenic |
| ATCTTGGGCTTTGGTGGTGG+AGG | 0.389017 | 3.4:-71325743 | None:intergenic |
| CAATCTACCCAGCAAGAAAA+AGG | 0.390333 | 3.4:+71324272 | MS.gene031884:CDS |
| TTGTGTCAAGTACACGTAGA+AGG | 0.395529 | 3.4:+71325699 | MS.gene031884:CDS |
| GATTGCTCGAGAAAGATTTA+GGG | 0.400346 | 3.4:+71322145 | MS.gene031884:CDS |
| ACTGGAATCTTGGGCTTTGG+TGG | 0.401139 | 3.4:-71325749 | None:intergenic |
| TGATACTAAAGCAACTAAAA+AGG | 0.402536 | 3.4:+71324113 | MS.gene031884:CDS |
| AGGTCTGCTTAAAGAACAAA+AGG | 0.410447 | 3.4:+71323547 | MS.gene031884:CDS |
| GCCCTCCTCAGACGTCTTTG+TGG | 0.419370 | 3.4:-71323411 | None:intergenic |
| TGATTTCAGAAATGTAACTT+TGG | 0.426248 | 3.4:+71323837 | MS.gene031884:intron |
| GTTGTCATTATCACTACCTT+TGG | 0.428731 | 3.4:-71325792 | None:intergenic |
| GATTTCAGAAATGTAACTTT+GGG | 0.430263 | 3.4:+71323838 | MS.gene031884:intron |
| TTATTTCTGCCACAGTGCTT+AGG | 0.445202 | 3.4:+71323365 | MS.gene031884:intron |
| CAAAGACGTCTGAGGAGGGC+GGG | 0.462351 | 3.4:+71323414 | MS.gene031884:CDS |
| AGCAGGTCCCTGAAAACAAA+CGG | 0.472188 | 3.4:+71324810 | MS.gene031884:CDS |
| CGTTTACTGTACACAGGAGT+TGG | 0.472645 | 3.4:-71324637 | None:intergenic |
| GAGGATAGCAGTGATGATGA+TGG | 0.475078 | 3.4:+71325872 | MS.gene031884:CDS |
| CCAAGATAGCTGAAGGCAAT+GGG | 0.479554 | 3.4:+71323585 | MS.gene031884:CDS |
| ACATCAATCTAAAGATGAAA+AGG | 0.481334 | 3.4:+71323481 | MS.gene031884:CDS |
| TAGGAAGAAGGCACGGGCCA+AGG | 0.492533 | 3.4:+71325649 | MS.gene031884:CDS |
| CCACAGTGCTTAGGAGAGGC+TGG | 0.495291 | 3.4:+71323374 | MS.gene031884:intron |
| AGTATTCTCTGCTGACGAAT+GGG | 0.496613 | 3.4:-71324370 | None:intergenic |
| ATCAATACCCTCAAGTTCCT+TGG | 0.499914 | 3.4:-71325666 | None:intergenic |
| TCTTTGCCACTAGTTTCCAC+TGG | 0.500056 | 3.4:-71325767 | None:intergenic |
| CTTCATACCATCTTCTGCCA+TGG | 0.507544 | 3.4:-71321917 | None:intergenic |
| AAATCTGTTATTAAAGCATG+TGG | 0.508183 | 3.4:+71324673 | MS.gene031884:CDS |
| GGCAAGATGCAGACTCCTGT+TGG | 0.510887 | 3.4:+71324222 | MS.gene031884:CDS |
| AGATGAAGAAGATGAAGAAG+AGG | 0.513270 | 3.4:+71325850 | MS.gene031884:CDS |
| AAAGACGTCTGAGGAGGGCG+GGG | 0.515404 | 3.4:+71323415 | MS.gene031884:CDS |
| ACCAAGATAGCTGAAGGCAA+TGG | 0.516736 | 3.4:+71323584 | MS.gene031884:CDS |
| CAAAGAAGTAAATAGGAAGA+AGG | 0.517613 | 3.4:+71325637 | MS.gene031884:CDS |
| GGAGAAAATGGAAGATTCTC+CGG | 0.519838 | 3.4:+71323520 | MS.gene031884:CDS |
| GTGAGAAACGCGAGAGCGCA+TGG | 0.525813 | 3.4:-71321986 | None:intergenic |
| GTCTTCAAATCCATCTGAGA+AGG | 0.532832 | 3.4:+71324883 | MS.gene031884:CDS |
| GAGAGTGAAGAATTTAATGC+GGG | 0.538623 | 3.4:+71325899 | MS.gene031884:CDS |
| GGTCTGCTTAAAGAACAAAA+GGG | 0.541386 | 3.4:+71323548 | MS.gene031884:CDS |
| GATAATGACAACGATGATGA+AGG | 0.542203 | 3.4:+71325803 | MS.gene031884:CDS |
| TAGTATTCTCTGCTGACGAA+TGG | 0.542456 | 3.4:-71324371 | None:intergenic |
| GCAGGTCCCTGAAAACAAAC+GGG | 0.543917 | 3.4:+71324811 | MS.gene031884:CDS |
| TAGTCTTCGCCGATTATTGG+AGG | 0.546979 | 3.4:+71323861 | MS.gene031884:CDS |
| TCTGATTCATGCAGATGAAG+AGG | 0.550672 | 3.4:+71326842 | MS.gene031884:intron |
| GGCACGGGCCAAGGAACTTG+AGG | 0.552578 | 3.4:+71325658 | MS.gene031884:CDS |
| TCTTTAAGCAGACCTAATAC+CGG | 0.555361 | 3.4:-71323539 | None:intergenic |
| AGAGAGACCATGGCAGAAGA+TGG | 0.563600 | 3.4:+71321910 | None:intergenic |
| TGAAGAAGATGAAGAAGAGG+AGG | 0.566614 | 3.4:+71325853 | MS.gene031884:CDS |
| TTCAGATGAAGAGAGTGAAG+AGG | 0.569278 | 3.4:+71324161 | MS.gene031884:CDS |
| ACAAGAGACTGAAGGACAGA+AGG | 0.569598 | 3.4:+71323454 | MS.gene031884:CDS |
| AGTAAATAGGAAGAAGGCAC+GGG | 0.570160 | 3.4:+71325643 | MS.gene031884:CDS |
| TGTGTCAAGTACACGTAGAA+GGG | 0.572023 | 3.4:+71325700 | MS.gene031884:CDS |
| AAGTAAATAGGAAGAAGGCA+CGG | 0.576297 | 3.4:+71325642 | MS.gene031884:CDS |
| GCACGGGCCAAGGAACTTGA+GGG | 0.580652 | 3.4:+71325659 | MS.gene031884:CDS |
| TCTTCAAATCCATCTGAGAA+GGG | 0.588082 | 3.4:+71324884 | MS.gene031884:CDS |
| AAAGGATCTCCCTGAAGATG+AGG | 0.591029 | 3.4:+71323499 | MS.gene031884:CDS |
| CAAGAAACCAAGATAGCTGA+AGG | 0.591724 | 3.4:+71323578 | MS.gene031884:CDS |
| AGAGACTGAAGGACAGAAGG+AGG | 0.595213 | 3.4:+71323457 | MS.gene031884:CDS |
| GAAGAAATACTATCTAGAGA+AGG | 0.598424 | 3.4:+71324857 | MS.gene031884:CDS |
| GCCACAAAGACGTCTGAGGA+GGG | 0.603177 | 3.4:+71323410 | MS.gene031884:CDS |
| ACAAAGACGTCTGAGGAGGG+CGG | 0.604069 | 3.4:+71323413 | MS.gene031884:CDS |
| GTCTGCTTAAAGAACAAAAG+GGG | 0.608849 | 3.4:+71323549 | MS.gene031884:CDS |
| TATAAGTAAAGAGCTTGATG+AGG | 0.612914 | 3.4:+71323930 | MS.gene031884:CDS |
| TGAGAGTGAAGAATTTAATG+CGG | 0.614155 | 3.4:+71325898 | MS.gene031884:CDS |
| TGCCACAAAGACGTCTGAGG+AGG | 0.617500 | 3.4:+71323409 | MS.gene031884:CDS |
| TTATTAAAGCATGTGGGATG+AGG | 0.618988 | 3.4:+71324680 | MS.gene031884:CDS |
| GTCCCTGAAAACAAACGGGA+CGG | 0.623725 | 3.4:+71324815 | MS.gene031884:CDS |
| AGAAGAGAAAGAAACAAACT+CGG | 0.624668 | 3.4:-71322022 | None:intergenic |
| CATACTCTGCATTAGCCTTG+AGG | 0.627628 | 3.4:-71323667 | None:intergenic |
| TATCAAACAATCTTTAGACA+AGG | 0.630540 | 3.4:+71322203 | MS.gene031884:CDS |
| TCTGCCACAGTGCTTAGGAG+AGG | 0.635941 | 3.4:+71323370 | MS.gene031884:intron |
| AATAGTGATGCAGAAGACGA+TGG | 0.643756 | 3.4:+71324324 | MS.gene031884:CDS |
| TCCTGTGTACAGTAAACGTG+TGG | 0.644428 | 3.4:+71324642 | MS.gene031884:CDS |
| AAGATTCCAGTGGAAACTAG+TGG | 0.653175 | 3.4:+71325761 | MS.gene031884:CDS |
| ACTAGTGGCAAAGATACCAA+AGG | 0.657324 | 3.4:+71325776 | MS.gene031884:CDS |
| TCTGCTTAAAGAACAAAAGG+GGG | 0.658439 | 3.4:+71323550 | MS.gene031884:CDS |
| TGATGCCACAAAGACGTCTG+AGG | 0.660915 | 3.4:+71323406 | MS.gene031884:CDS |
| ACCAAAGCCCAAGATTCCAG+TGG | 0.665045 | 3.4:+71325751 | MS.gene031884:CDS |
| GAAAGTACACAAGAGACTGA+AGG | 0.670007 | 3.4:+71323446 | MS.gene031884:CDS |
| TCCACACGTTTACTGTACAC+AGG | 0.676303 | 3.4:-71324643 | None:intergenic |
| AATCTGTTATTAAAGCATGT+GGG | 0.677116 | 3.4:+71324674 | MS.gene031884:CDS |
| GTCAGCAGAGAATACTACCA+AGG | 0.702422 | 3.4:+71324377 | MS.gene031884:CDS |
| AGGCAAAGAAAATGACGAGG+AGG | 0.708511 | 3.4:+71325823 | MS.gene031884:CDS |
| CTGCTTAAAGAACAAAAGGG+GGG | 0.713202 | 3.4:+71323551 | MS.gene031884:CDS |
| TGAAGGCAAAGAAAATGACG+AGG | 0.732415 | 3.4:+71325820 | MS.gene031884:CDS |
| AGAAACGCGAGAGCGCATGG+CGG | 0.788364 | 3.4:-71321983 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AGTAATTATTTCATTATATA+AGG | - | chr3.4:71324497-71324516 | None:intergenic | 10.0% |
| !!! | TTATTACTGAATTTTTTATT+AGG | + | chr3.4:71326211-71326230 | MS.gene031884:intron | 10.0% |
| !! | AAATCCAAATAAAAGAATAA+AGG | - | chr3.4:71322951-71322970 | None:intergenic | 15.0% |
| !! | ATTAATATCAGCATATTATT+TGG | + | chr3.4:71323773-71323792 | MS.gene031884:intron | 15.0% |
| !! | GTTAAATGTATTAAATATGT+TGG | + | chr3.4:71324549-71324568 | MS.gene031884:intron | 15.0% |
| !! | TCTAAGAAAATAAGAAAAAA+GGG | - | chr3.4:71325614-71325633 | None:intergenic | 15.0% |
| !! | TTACTTATAAACTTCTTAAA+GGG | - | chr3.4:71323919-71323938 | None:intergenic | 15.0% |
| !! | TTTAATAGCTTTCTTAATTA+GGG | - | chr3.4:71323633-71323652 | None:intergenic | 15.0% |
| !! | TTTACTTATAAACTTCTTAA+AGG | - | chr3.4:71323920-71323939 | None:intergenic | 15.0% |
| !!! | AGTCTATTTAAAATATTTCA+AGG | + | chr3.4:71325924-71325943 | MS.gene031884:intron | 15.0% |
| !!! | CTTGACTTTTTTATAAATAA+CGG | - | chr3.4:71324792-71324811 | None:intergenic | 15.0% |
| !!! | TGAAAATCAAAAATCAATTT+TGG | + | chr3.4:71325254-71325273 | MS.gene031884:intron | 15.0% |
| !!! | TTCTAAGAAAATAAGAAAAA+AGG | - | chr3.4:71325615-71325634 | None:intergenic | 15.0% |
| !!! | TTGACTTTTTTATAAATAAC+GGG | - | chr3.4:71324791-71324810 | None:intergenic | 15.0% |
| !!! | TTTATTTGGATTTTGTTTTA+TGG | + | chr3.4:71322958-71322977 | MS.gene031884:intron | 15.0% |
| !!! | TTTTAATAGCTTTCTTAATT+AGG | - | chr3.4:71323634-71323653 | None:intergenic | 15.0% |
| !! | AAAAATAGCTTATACATAAG+TGG | - | chr3.4:71322322-71322341 | None:intergenic | 20.0% |
| !! | AATTTACAGTAAAGTACAAA+AGG | - | chr3.4:71325206-71325225 | None:intergenic | 20.0% |
| !! | AATTTCCAATAATAGATGAT+AGG | - | chr3.4:71325232-71325251 | None:intergenic | 20.0% |
| !! | ACAATCTAAATTAGGTTATA+CGG | - | chr3.4:71326612-71326631 | None:intergenic | 20.0% |
| !! | ATACATTTATACTTGACTTA+TGG | - | chr3.4:71323235-71323254 | None:intergenic | 20.0% |
| !! | ATGTATTGAAAAACAAAAAC+TGG | + | chr3.4:71325393-71325412 | MS.gene031884:intron | 20.0% |
| !! | GAATAATTTAGTAATAACCT+TGG | - | chr3.4:71324397-71324416 | None:intergenic | 20.0% |
| !! | TAGAAATCAAAGAAGTAAAT+AGG | + | chr3.4:71325630-71325649 | MS.gene031884:intron | 20.0% |
| !! | TATTTATAAAAAAGTCAAGC+AGG | + | chr3.4:71324793-71324812 | MS.gene031884:CDS | 20.0% |
| !! | TATTTCATTATATAAGGAGT+TGG | - | chr3.4:71324491-71324510 | None:intergenic | 20.0% |
| !! | TCATAAATCATAATAGATTC+TGG | + | chr3.4:71325976-71325995 | MS.gene031884:intron | 20.0% |
| !! | TTGAAAACACAATCTAAATT+AGG | - | chr3.4:71326620-71326639 | None:intergenic | 20.0% |
| !!! | AAAAAAAAAAGTGTTCCAAA+AGG | + | chr3.4:71324201-71324220 | MS.gene031884:CDS | 20.0% |
| !!! | TAAACTTGATAAATTTTCTC+TGG | + | chr3.4:71323891-71323910 | MS.gene031884:CDS | 20.0% |
| !!! | TATGCTTTTACTTCATTTTA+TGG | + | chr3.4:71323134-71323153 | MS.gene031884:intron | 20.0% |
| !!! | TTTGGAACACTTTTTTTTTT+AGG | - | chr3.4:71324201-71324220 | None:intergenic | 20.0% |
| !!! | TTTTCTAATTATTCGTTGTT+CGG | + | chr3.4:71323698-71323717 | MS.gene031884:intron | 20.0% |
| ! | AAATAATGAAGCTAACATTC+GGG | - | chr3.4:71324955-71324974 | None:intergenic | 25.0% |
| ! | AAATCTGTTATTAAAGCATG+TGG | + | chr3.4:71324673-71324692 | MS.gene031884:CDS | 25.0% |
| ! | AATCTGTTATTAAAGCATGT+GGG | + | chr3.4:71324674-71324693 | MS.gene031884:CDS | 25.0% |
| ! | ACAGCATTTAGATATCAAAA+TGG | - | chr3.4:71326160-71326179 | None:intergenic | 25.0% |
| ! | ACATCAATCTAAAGATGAAA+AGG | + | chr3.4:71323481-71323500 | MS.gene031884:CDS | 25.0% |
| ! | ATACAAATCTAACATCTTCT+GGG | - | chr3.4:71325482-71325501 | None:intergenic | 25.0% |
| ! | ATATGCATTCCATTATCAAA+GGG | + | chr3.4:71324993-71325012 | MS.gene031884:intron | 25.0% |
| ! | ATTTCAAATGACCCAAAAAA+AGG | - | chr3.4:71325512-71325531 | None:intergenic | 25.0% |
| ! | CAAAAACTGGAATATTTGAT+AGG | + | chr3.4:71325406-71325425 | MS.gene031884:intron | 25.0% |
| ! | CAAAGTTATGTTTAATGTGA+AGG | + | chr3.4:71324026-71324045 | MS.gene031884:intron | 25.0% |
| ! | CAAATAATGAAGCTAACATT+CGG | - | chr3.4:71324956-71324975 | None:intergenic | 25.0% |
| ! | CAATCTAAATTAGGTTATAC+GGG | - | chr3.4:71326611-71326630 | None:intergenic | 25.0% |
| ! | GATTTCAGAAATGTAACTTT+GGG | + | chr3.4:71323838-71323857 | MS.gene031884:intron | 25.0% |
| ! | GTATGAAATGACATAAAAAG+AGG | - | chr3.4:71322611-71322630 | None:intergenic | 25.0% |
| ! | TAAAAGAATAAAGGTCTGTT+TGG | - | chr3.4:71322942-71322961 | None:intergenic | 25.0% |
| ! | TATACAAATCTAACATCTTC+TGG | - | chr3.4:71325483-71325502 | None:intergenic | 25.0% |
| ! | TATATGCATTCCATTATCAA+AGG | + | chr3.4:71324992-71325011 | MS.gene031884:intron | 25.0% |
| ! | TATCAAACAATCTTTAGACA+AGG | + | chr3.4:71322203-71322222 | MS.gene031884:CDS | 25.0% |
| ! | TGATACTAAAGCAACTAAAA+AGG | + | chr3.4:71324113-71324132 | MS.gene031884:CDS | 25.0% |
| ! | TGATTTCAGAAATGTAACTT+TGG | + | chr3.4:71323837-71323856 | MS.gene031884:intron | 25.0% |
| ! | TTAGTCCTATCATCTATTAT+TGG | + | chr3.4:71325224-71325243 | MS.gene031884:intron | 25.0% |
| ! | TTTCAAATGACCCAAAAAAA+GGG | - | chr3.4:71325511-71325530 | None:intergenic | 25.0% |
| !! | CAGACCTTTATTCTTTTATT+TGG | + | chr3.4:71322944-71322963 | MS.gene031884:intron | 25.0% |
| !!! | AAGTTATAAGCTGTTTTCAT+AGG | + | chr3.4:71322381-71322400 | MS.gene031884:intron | 25.0% |
| !!! | ACTTTTTTATAAATAACGGG+AGG | - | chr3.4:71324788-71324807 | None:intergenic | 25.0% |
| !!! | AGTGGATTTTAAAAATTACC+TGG | + | chr3.4:71323039-71323058 | MS.gene031884:intron | 25.0% |
| !!! | AGTTATAAGCTGTTTTCATA+GGG | + | chr3.4:71322382-71322401 | MS.gene031884:intron | 25.0% |
| !!! | TGTATTTTTGTGCTTCTTAT+GGG | - | chr3.4:71323991-71324010 | None:intergenic | 25.0% |
| !!! | TTCCTCTGTATTTAAGATTT+TGG | - | chr3.4:71326651-71326670 | None:intergenic | 25.0% |
| !!! | TTTTTAGTTGCTTTAGTATC+AGG | - | chr3.4:71324114-71324133 | None:intergenic | 25.0% |
| !!! | TTTTTCAATTCAGATTGCAA+GGG | - | chr3.4:71322567-71322586 | None:intergenic | 25.0% |
| !!! | TTTTTTCAATTCAGATTGCA+AGG | - | chr3.4:71322568-71322587 | None:intergenic | 25.0% |
| AAAAAGATCTTCATACCTCA+AGG | + | chr3.4:71323652-71323671 | MS.gene031884:CDS | 30.0% | |
| AAGCTATCTTGGAGAAATTA+TGG | + | chr3.4:71322817-71322836 | MS.gene031884:intron | 30.0% | |
| AAGCTCAAAGATATAGAACA+TGG | - | chr3.4:71326124-71326143 | None:intergenic | 30.0% | |
| AATAATGAAGCTAACATTCG+GGG | - | chr3.4:71324954-71324973 | None:intergenic | 30.0% | |
| ACAGCTTATAGCTTCAAATT+TGG | - | chr3.4:71322769-71322788 | None:intergenic | 30.0% | |
| ACTCCAGTATTTGCAAATAA+AGG | + | chr3.4:71325431-71325450 | MS.gene031884:intron | 30.0% | |
| AGAAGAGAAAGAAACAAACT+CGG | - | chr3.4:71322025-71322044 | None:intergenic | 30.0% | |
| AGCCAAAATCTTAAATACAG+AGG | + | chr3.4:71326646-71326665 | MS.gene031884:intron | 30.0% | |
| AGCTCAAAGATATAGAACAT+GGG | - | chr3.4:71326123-71326142 | None:intergenic | 30.0% | |
| AGGAAAAGCTTTCAATTGTT+TGG | - | chr3.4:71325071-71325090 | None:intergenic | 30.0% | |
| ATAACCTTGTAAGAAAGTGA+CGG | - | chr3.4:71322495-71322514 | None:intergenic | 30.0% | |
| ATATCAAAATGGAGCTATAC+AGG | - | chr3.4:71326149-71326168 | None:intergenic | 30.0% | |
| ATCACCCATGAAAAATATGA+GGG | - | chr3.4:71326527-71326546 | None:intergenic | 30.0% | |
| CAAAGAAGTAAATAGGAAGA+AGG | + | chr3.4:71325637-71325656 | MS.gene031884:CDS | 30.0% | |
| CATTCTCTATTATTGGAGTT+AGG | + | chr3.4:71325317-71325336 | MS.gene031884:intron | 30.0% | |
| CGGACAACTAATTAAAGAAT+TGG | + | chr3.4:71324835-71324854 | MS.gene031884:CDS | 30.0% | |
| CTAACTCCAATAATAGAGAA+TGG | - | chr3.4:71325319-71325338 | None:intergenic | 30.0% | |
| CTCCAGTATTTGCAAATAAA+GGG | + | chr3.4:71325432-71325451 | MS.gene031884:intron | 30.0% | |
| CTGCACAAAAAAAAAAAACC+CGG | - | chr3.4:71325109-71325128 | None:intergenic | 30.0% | |
| GAAGAAATACTATCTAGAGA+AGG | + | chr3.4:71324857-71324876 | MS.gene031884:CDS | 30.0% | |
| GATGTTTAATTGCTTGGATA+GGG | + | chr3.4:71326046-71326065 | MS.gene031884:intron | 30.0% | |
| GGAAAAGCTTTCAATTGTTT+GGG | - | chr3.4:71325070-71325089 | None:intergenic | 30.0% | |
| TAAATACAGAGGAAGAAATG+AGG | - | chr3.4:71326676-71326657 | None:intergenic | 30.0% | |
| TAAGATCTTCCTCCAATAAT+CGG | - | chr3.4:71323873-71323892 | None:intergenic | 30.0% | |
| TACAAATCTAACATCTTCTG+GGG | - | chr3.4:71325481-71325500 | None:intergenic | 30.0% | |
| TAGCTGAAGAAACTTATTGT+TGG | + | chr3.4:71323098-71323117 | MS.gene031884:intron | 30.0% | |
| TATAAGTAAAGAGCTTGATG+AGG | + | chr3.4:71323930-71323949 | MS.gene031884:CDS | 30.0% | |
| TATATGTGATGAAGAATGCT+TGG | + | chr3.4:71323311-71323330 | MS.gene031884:intron | 30.0% | |
| TATCAAAATGGAGCTATACA+GGG | - | chr3.4:71326148-71326167 | None:intergenic | 30.0% | |
| TATGCATTCCATTATCAAAG+GGG | + | chr3.4:71324994-71325013 | MS.gene031884:intron | 30.0% | |
| TCATTTCTTCCTCTGTATTT+AGG | + | chr3.4:71326347-71326366 | MS.gene031884:intron | 30.0% | |
| TCCAGTATTTGCAAATAAAG+GGG | + | chr3.4:71325433-71325452 | MS.gene031884:intron | 30.0% | |
| TCTGTTGATGTTTAATTGCT+TGG | + | chr3.4:71326040-71326059 | MS.gene031884:intron | 30.0% | |
| TCTTCCAAAACAAAAGATTG+AGG | - | chr3.4:71326405-71326424 | None:intergenic | 30.0% | |
| TGATGAAAGATTTCAGTTTC+AGG | + | chr3.4:71326543-71326562 | MS.gene031884:intron | 30.0% | |
| TGATGTTTAATTGCTTGGAT+AGG | + | chr3.4:71326045-71326064 | MS.gene031884:intron | 30.0% | |
| TTCTTAATTAGGGTCTCATT+TGG | - | chr3.4:71323623-71323642 | None:intergenic | 30.0% | |
| TTGAGGTTGCTAATCAATTA+AGG | - | chr3.4:71326266-71326285 | None:intergenic | 30.0% | |
| TTGGTTGAATTTGTAGTGTT+TGG | - | chr3.4:71322662-71322681 | None:intergenic | 30.0% | |
| TTTATTAGGTCCATGTATTC+AGG | + | chr3.4:71326225-71326244 | MS.gene031884:intron | 30.0% | |
| ! | AAAGTGCCATTCTCTATTAT+TGG | + | chr3.4:71325310-71325329 | MS.gene031884:intron | 30.0% |
| ! | GATGAGGTGATTTTCTATTT+TGG | + | chr3.4:71324696-71324715 | MS.gene031884:intron | 30.0% |
| !! | ATTAATGTCTTCTGAAGTTC+CGG | + | chr3.4:71324050-71324069 | MS.gene031884:CDS | 30.0% |
| !! | GTGTATTTTTGTGCTTCTTA+TGG | - | chr3.4:71323992-71324011 | None:intergenic | 30.0% |
| !! | TTCTGAAGTTCAAGGAAAAA+AGG | - | chr3.4:71324601-71324620 | None:intergenic | 30.0% |
| !!! | ACCAAAAGTTTTAGACTGTT+TGG | - | chr3.4:71322894-71322913 | None:intergenic | 30.0% |
| !!! | CCAAAAGTTTTAGACTGTTT+GGG | - | chr3.4:71322893-71322912 | None:intergenic | 30.0% |
| !!! | GTATAGTAGTCCCTTTTTTT+GGG | + | chr3.4:71325498-71325517 | MS.gene031884:intron | 30.0% |
| !!! | TGTATAGTAGTCCCTTTTTT+TGG | + | chr3.4:71325497-71325516 | MS.gene031884:intron | 30.0% |
| AAAAAAAACCCGGATCAAAC+TGG | - | chr3.4:71325099-71325118 | None:intergenic | 35.0% | |
| AAGAAGACGGTTAAAGAAGT+CGG | - | chr3.4:71326721-71326740 | None:intergenic | 35.0% | |
| AAGTAAATAGGAAGAAGGCA+CGG | + | chr3.4:71325642-71325661 | MS.gene031884:CDS | 35.0% | |
| AATCTGAGTCCTAAATACAG+AGG | - | chr3.4:71326359-71326378 | None:intergenic | 35.0% | |
| AGATGAAGAAGATGAAGAAG+AGG | + | chr3.4:71325850-71325869 | MS.gene031884:CDS | 35.0% | |
| AGATTGCTCGAGAAAGATTT+AGG | + | chr3.4:71322144-71322163 | MS.gene031884:CDS | 35.0% | |
| AGGAAGAAATGAGTTGTACT+TGG | + | chr3.4:71326666-71326685 | MS.gene031884:intron | 35.0% | |
| AGGTCTGCTTAAAGAACAAA+AGG | + | chr3.4:71323547-71323566 | MS.gene031884:CDS | 35.0% | |
| ATCATCCTCAACAAAGAACT+AGG | - | chr3.4:71324733-71324752 | None:intergenic | 35.0% | |
| CAACAAAGAACTAGGAACAT+AGG | - | chr3.4:71324725-71324744 | None:intergenic | 35.0% | |
| CAACTTAATGCAGCAAACAT+TGG | - | chr3.4:71325535-71325554 | None:intergenic | 35.0% | |
| CAATCTAAGTCCTGAATACA+TGG | - | chr3.4:71326238-71326257 | None:intergenic | 35.0% | |
| CAGCACATTTAAAGAATCTC+TGG | + | chr3.4:71326478-71326497 | MS.gene031884:intron | 35.0% | |
| CATCACCCATGAAAAATATG+AGG | - | chr3.4:71326528-71326547 | None:intergenic | 35.0% | |
| CTATCATCACTAGATGAAAG+TGG | - | chr3.4:71323277-71323296 | None:intergenic | 35.0% | |
| GAATAAAGGTCTGTTTGGAT+TGG | - | chr3.4:71322937-71322956 | None:intergenic | 35.0% | |
| GACTTATGGTAACCAAAGTT+TGG | - | chr3.4:71323221-71323240 | None:intergenic | 35.0% | |
| GAGGTGTATCTATATGTACT+TGG | - | chr3.4:71326329-71326348 | None:intergenic | 35.0% | |
| GATAATGACAACGATGATGA+AGG | + | chr3.4:71325803-71325822 | MS.gene031884:CDS | 35.0% | |
| GATTGCTCGAGAAAGATTTA+GGG | + | chr3.4:71322145-71322164 | MS.gene031884:CDS | 35.0% | |
| GGTCTGCTTAAAGAACAAAA+GGG | + | chr3.4:71323548-71323567 | MS.gene031884:CDS | 35.0% | |
| GTCTGCTTAAAGAACAAAAG+GGG | + | chr3.4:71323549-71323568 | MS.gene031884:CDS | 35.0% | |
| GTTGTCATTATCACTACCTT+TGG | - | chr3.4:71325795-71325814 | None:intergenic | 35.0% | |
| TAAGTAGTCTCAGACAAACA+TGG | + | chr3.4:71325351-71325370 | MS.gene031884:intron | 35.0% | |
| TAGGGTCTTTCAAAGGAAAA+AGG | - | chr3.4:71322239-71322258 | None:intergenic | 35.0% | |
| TCACCCATGAAAAATATGAG+GGG | - | chr3.4:71326526-71326545 | None:intergenic | 35.0% | |
| TCTGCTTAAAGAACAAAAGG+GGG | + | chr3.4:71323550-71323569 | MS.gene031884:CDS | 35.0% | |
| TCTTCAAATCCATCTGAGAA+GGG | + | chr3.4:71324884-71324903 | MS.gene031884:CDS | 35.0% | |
| TCTTCTCTATGACAACAAGT+TGG | + | chr3.4:71326757-71326776 | MS.gene031884:intron | 35.0% | |
| TCTTTAAGCAGACCTAATAC+CGG | - | chr3.4:71323542-71323561 | None:intergenic | 35.0% | |
| TGTATTCAGCTTAAGTGAAG+AGG | - | chr3.4:71323177-71323196 | None:intergenic | 35.0% | |
| TTAACCGTCTTCTTTAACTC+TGG | + | chr3.4:71326727-71326746 | MS.gene031884:intron | 35.0% | |
| TTATACATATGCGTTTGCGT+TGG | - | chr3.4:71322265-71322284 | None:intergenic | 35.0% | |
| TTATTAAAGCATGTGGGATG+AGG | + | chr3.4:71324680-71324699 | MS.gene031884:CDS | 35.0% | |
| TTGGAATTAGGGTCTTTCAA+AGG | - | chr3.4:71322246-71322265 | None:intergenic | 35.0% | |
| ! | ATGTTCCTAGTTCTTTGTTG+AGG | + | chr3.4:71324725-71324744 | MS.gene031884:intron | 35.0% |
| ! | ATTTTCTTAGCACTTTCTGC+AGG | - | chr3.4:71324078-71324097 | None:intergenic | 35.0% |
| ! | TAGAGAATGGCACTTTTACA+TGG | - | chr3.4:71325306-71325325 | None:intergenic | 35.0% |
| ! | TCCCCTTTATTTGCAAATAC+TGG | - | chr3.4:71325437-71325456 | None:intergenic | 35.0% |
| ! | TGTTTTGTGTGACCAAACTT+TGG | + | chr3.4:71323206-71323225 | MS.gene031884:intron | 35.0% |
| !! | CCCAAACAGTCTAAAACTTT+TGG | + | chr3.4:71322890-71322909 | MS.gene031884:intron | 35.0% |
| !! | CTTGTTTCTTCTGAAGTTCA+AGG | - | chr3.4:71324609-71324628 | None:intergenic | 35.0% |
| !! | GCAACCTCAATCTTTTGTTT+TGG | + | chr3.4:71326398-71326417 | MS.gene031884:intron | 35.0% |
| !! | GCTGTTTTCATAAGCTATCT+TGG | + | chr3.4:71322806-71322825 | MS.gene031884:intron | 35.0% |
| !! | TCATCTCCTTTACGCTTTTT+GGG | - | chr3.4:71324249-71324268 | None:intergenic | 35.0% |
| !!! | TGCTGAAAAGTTGGTTTTTC+TGG | + | chr3.4:71323007-71323026 | MS.gene031884:intron | 35.0% |
| AAAAACTCACCCTTCTCAGA+TGG | - | chr3.4:71324896-71324915 | None:intergenic | 40.0% | |
| AAGATTCCAGTGGAAACTAG+TGG | + | chr3.4:71325761-71325780 | MS.gene031884:CDS | 40.0% | |
| AATAGTGATGCAGAAGACGA+TGG | + | chr3.4:71324324-71324343 | MS.gene031884:CDS | 40.0% | |
| ACCCATGAAAAATATGAGGG+GGG | - | chr3.4:71326524-71326543 | None:intergenic | 40.0% | |
| ACTAGTGGCAAAGATACCAA+AGG | + | chr3.4:71325776-71325795 | MS.gene031884:CDS | 40.0% | |
| ACTGCTTAACCACTGCAAAA+AGG | - | chr3.4:71326021-71326040 | None:intergenic | 40.0% | |
| AGTATTCTCTGCTGACGAAT+GGG | - | chr3.4:71324373-71324392 | None:intergenic | 40.0% | |
| ATCAATACCCTCAAGTTCCT+TGG | - | chr3.4:71325669-71325688 | None:intergenic | 40.0% | |
| ATGAAGAGGACAGTGATTGA+GGG | + | chr3.4:71326856-71326875 | MS.gene031884:CDS | 40.0% | |
| ATGCGTTTGCGTTGGAATTA+GGG | - | chr3.4:71322257-71322276 | None:intergenic | 40.0% | |
| ATGGAAGATTCTCCGGTATT+AGG | + | chr3.4:71323527-71323546 | MS.gene031884:CDS | 40.0% | |
| ATTATCAAAGGGGATCTTGG+AGG | + | chr3.4:71325004-71325023 | MS.gene031884:intron | 40.0% | |
| CAAGAAACCAAGATAGCTGA+AGG | + | chr3.4:71323578-71323597 | MS.gene031884:CDS | 40.0% | |
| CAATCTACCCAGCAAGAAAA+AGG | + | chr3.4:71324272-71324291 | MS.gene031884:CDS | 40.0% | |
| CACCCATGAAAAATATGAGG+GGG | - | chr3.4:71326525-71326544 | None:intergenic | 40.0% | |
| CTAGTTTCCACTGGAATCTT+GGG | - | chr3.4:71325761-71325780 | None:intergenic | 40.0% | |
| CTGCTTAAAGAACAAAAGGG+GGG | + | chr3.4:71323551-71323570 | MS.gene031884:CDS | 40.0% | |
| CTTGGATAGGGTAAGCAATA+TGG | + | chr3.4:71326058-71326077 | MS.gene031884:intron | 40.0% | |
| GCTTATAAGTCATCCGCTAT+AGG | + | chr3.4:71322711-71322730 | MS.gene031884:intron | 40.0% | |
| GGAGAAAATGGAAGATTCTC+CGG | + | chr3.4:71323520-71323539 | MS.gene031884:CDS | 40.0% | |
| GGGTAAGCAATATGGATAGT+TGG | + | chr3.4:71326066-71326085 | MS.gene031884:intron | 40.0% | |
| GGGTTGTGTGAGAGATAATT+GGG | - | chr3.4:71325050-71325069 | None:intergenic | 40.0% | |
| GTCTTCAAATCCATCTGAGA+AGG | + | chr3.4:71324883-71324902 | MS.gene031884:CDS | 40.0% | |
| TAGTATTCTCTGCTGACGAA+TGG | - | chr3.4:71324374-71324393 | None:intergenic | 40.0% | |
| TATGCGTTTGCGTTGGAATT+AGG | - | chr3.4:71322258-71322277 | None:intergenic | 40.0% | |
| TCCAAGATCCCCTTTGATAA+TGG | - | chr3.4:71325005-71325024 | None:intergenic | 40.0% | |
| TCCATTATCAAAGGGGATCT+TGG | + | chr3.4:71325001-71325020 | MS.gene031884:intron | 40.0% | |
| TCTGATTCATGCAGATGAAG+AGG | + | chr3.4:71326842-71326861 | MS.gene031884:intron | 40.0% | |
| TGAAGAAGATGAAGAAGAGG+AGG | + | chr3.4:71325853-71325872 | MS.gene031884:CDS | 40.0% | |
| TGAAGGCAAAGAAAATGACG+AGG | + | chr3.4:71325820-71325839 | MS.gene031884:CDS | 40.0% | |
| TGCACCAGAGTTAAAGAAGA+CGG | - | chr3.4:71326734-71326753 | None:intergenic | 40.0% | |
| TGGGTTGTGTGAGAGATAAT+TGG | - | chr3.4:71325051-71325070 | None:intergenic | 40.0% | |
| TGTGTCAAGTACACGTAGAA+GGG | + | chr3.4:71325700-71325719 | MS.gene031884:CDS | 40.0% | |
| TTCAGATGAAGAGAGTGAAG+AGG | + | chr3.4:71324161-71324180 | MS.gene031884:CDS | 40.0% | |
| TTCTGCTGTTGCTGAAAAGT+TGG | + | chr3.4:71322998-71323017 | MS.gene031884:intron | 40.0% | |
| TTGTGTCAAGTACACGTAGA+AGG | + | chr3.4:71325699-71325718 | MS.gene031884:CDS | 40.0% | |
| ! | ACCCCCCTCATATTTTTCAT+GGG | + | chr3.4:71326520-71326539 | MS.gene031884:intron | 40.0% |
| ! | ACTAGTTTCCACTGGAATCT+TGG | - | chr3.4:71325762-71325781 | None:intergenic | 40.0% |
| ! | AGCTAGCTTATAGCTCATAG+CGG | - | chr3.4:71322694-71322713 | None:intergenic | 40.0% |
| ! | AGGGTTTGACGAGTTTTCTT+TGG | + | chr3.4:71322164-71322183 | MS.gene031884:CDS | 40.0% |
| ! | AGTAAATAGGAAGAAGGCAC+GGG | + | chr3.4:71325643-71325662 | MS.gene031884:CDS | 40.0% |
| ! | CCATTTTCTCCTCATCTTCA+GGG | - | chr3.4:71323511-71323530 | None:intergenic | 40.0% |
| ! | CTAACCGTCACTTTCTTACA+AGG | + | chr3.4:71322488-71322507 | MS.gene031884:intron | 40.0% |
| ! | CTGCACTGCTTTCATTTTGT+TGG | + | chr3.4:71325949-71325968 | MS.gene031884:intron | 40.0% |
| ! | CTGTTTTCATAGGGTCTGTT+TGG | + | chr3.4:71322391-71322410 | MS.gene031884:intron | 40.0% |
| ! | CTTTTTCTTGCTGGGTAGAT+TGG | - | chr3.4:71324274-71324293 | None:intergenic | 40.0% |
| ! | GAAAGTACACAAGAGACTGA+AGG | + | chr3.4:71323446-71323465 | MS.gene031884:CDS | 40.0% |
| ! | GTCATCTCCTTTACGCTTTT+TGG | - | chr3.4:71324250-71324269 | None:intergenic | 40.0% |
| ! | TCCATTTTCTCCTCATCTTC+AGG | - | chr3.4:71323512-71323531 | None:intergenic | 40.0% |
| ! | TCCTGTTTTCCAGTTTGATC+CGG | + | chr3.4:71325087-71325106 | MS.gene031884:intron | 40.0% |
| ! | TTACCTGGCTTGTCAAATAC+CGG | + | chr3.4:71323054-71323073 | MS.gene031884:intron | 40.0% |
| ! | TTCTCTAGTCCTTTTTGCAG+TGG | + | chr3.4:71326009-71326028 | MS.gene031884:intron | 40.0% |
| !! | CTCATAGCGGATAAGATAGT+TGG | - | chr3.4:71322681-71322700 | None:intergenic | 40.0% |
| !! | TCTTCTGATGCTGCTTTATC+AGG | - | chr3.4:71324303-71324322 | None:intergenic | 40.0% |
| !! | TTATTTCTGCCACAGTGCTT+AGG | + | chr3.4:71323365-71323384 | MS.gene031884:intron | 40.0% |
| !!! | TTTTTCTGGCTGTTTCTGAG+TGG | + | chr3.4:71323021-71323040 | MS.gene031884:intron | 40.0% |
| AAAGGATCTCCCTGAAGATG+AGG | + | chr3.4:71323499-71323518 | MS.gene031884:CDS | 45.0% | |
| ACAAGAGACTGAAGGACAGA+AGG | + | chr3.4:71323454-71323473 | MS.gene031884:CDS | 45.0% | |
| ACCAAGATAGCTGAAGGCAA+TGG | + | chr3.4:71323584-71323603 | MS.gene031884:CDS | 45.0% | |
| AGCAGGTCCCTGAAAACAAA+CGG | + | chr3.4:71324810-71324829 | MS.gene031884:CDS | 45.0% | |
| AGGCAAAGAAAATGACGAGG+AGG | + | chr3.4:71325823-71325842 | MS.gene031884:CDS | 45.0% | |
| CCAAGATAGCTGAAGGCAAT+GGG | + | chr3.4:71323585-71323604 | MS.gene031884:CDS | 45.0% | |
| CCCTGAAGATGAGGAGAAAA+TGG | + | chr3.4:71323508-71323527 | MS.gene031884:CDS | 45.0% | |
| CGTTTACTGTACACAGGAGT+TGG | - | chr3.4:71324640-71324659 | None:intergenic | 45.0% | |
| GATGAAGAGGACAGTGATTG+AGG | + | chr3.4:71326855-71326874 | MS.gene031884:intron | 45.0% | |
| GGCTTGTCAAATACCGGAAA+TGG | + | chr3.4:71323060-71323079 | MS.gene031884:intron | 45.0% | |
| GTCAGCAGAGAATACTACCA+AGG | + | chr3.4:71324377-71324396 | MS.gene031884:CDS | 45.0% | |
| TCCACACGTTTACTGTACAC+AGG | - | chr3.4:71324646-71324665 | None:intergenic | 45.0% | |
| TCCTGTGTACAGTAAACGTG+TGG | + | chr3.4:71324642-71324661 | MS.gene031884:CDS | 45.0% | |
| TGTCAAATACCGGAAATGGC+TGG | + | chr3.4:71323064-71323083 | MS.gene031884:intron | 45.0% | |
| TGTGCGTGTTCAGCATATTG+AGG | - | chr3.4:71326283-71326302 | None:intergenic | 45.0% | |
| TTAGCACTTTCTGCAGGTTC+CGG | - | chr3.4:71324072-71324091 | None:intergenic | 45.0% | |
| TTTCCGGTATTTGACAAGCC+AGG | - | chr3.4:71323060-71323079 | None:intergenic | 45.0% | |
| ! | AGGCTTGACCTTTTTCTTGC+TGG | - | chr3.4:71324283-71324302 | None:intergenic | 45.0% |
| ! | CCTGTTTTCCAGTTTGATCC+GGG | + | chr3.4:71325088-71325107 | MS.gene031884:intron | 45.0% |
| ! | GACCCCCCTCATATTTTTCA+TGG | + | chr3.4:71326519-71326538 | MS.gene031884:intron | 45.0% |
| ! | GAGGATAGCAGTGATGATGA+TGG | + | chr3.4:71325872-71325891 | MS.gene031884:CDS | 45.0% |
| ! | GCAGATAAGCTAGCCTATAG+CGG | - | chr3.4:71322727-71322746 | None:intergenic | 45.0% |
| ! | GGCTTGACCTTTTTCTTGCT+GGG | - | chr3.4:71324282-71324301 | None:intergenic | 45.0% |
| ! | GTTGGACCCAAAAAGCGTAA+AGG | + | chr3.4:71324240-71324259 | MS.gene031884:CDS | 45.0% |
| ! | TAGTCTTCGCCGATTATTGG+AGG | + | chr3.4:71323861-71323880 | MS.gene031884:CDS | 45.0% |
| ! | TCTTTGCCACTAGTTTCCAC+TGG | - | chr3.4:71325770-71325789 | None:intergenic | 45.0% |
| !! | CATACTCTGCATTAGCCTTG+AGG | - | chr3.4:71323670-71323689 | None:intergenic | 45.0% |
| !!! | AAGGGCGACGATTAGTTTTG+CGG | + | chr3.4:71325718-71325737 | MS.gene031884:CDS | 45.0% |
| !!! | TTACGCTTTTTGGGTCCAAC+AGG | - | chr3.4:71324240-71324259 | None:intergenic | 45.0% |
| !!! | TTTTATCTTTATATTTTTAT+TGG | + | chr3.4:71325578-71325597 | MS.gene031884:intron | 5.0% |
| ACCAAAGCCCAAGATTCCAG+TGG | + | chr3.4:71325751-71325770 | MS.gene031884:CDS | 50.0% | |
| AGAGACTGAAGGACAGAAGG+AGG | + | chr3.4:71323457-71323476 | MS.gene031884:CDS | 50.0% | |
| CAAACATGGCTGCACAGAGA+TGG | + | chr3.4:71325365-71325384 | MS.gene031884:intron | 50.0% | |
| CCCATTGCCTTCAGCTATCT+TGG | - | chr3.4:71323588-71323607 | None:intergenic | 50.0% | |
| CCCGGATCAAACTGGAAAAC+AGG | - | chr3.4:71325091-71325110 | None:intergenic | 50.0% | |
| GCAGGTCCCTGAAAACAAAC+GGG | + | chr3.4:71324811-71324830 | MS.gene031884:CDS | 50.0% | |
| GTCCCTGAAAACAAACGGGA+CGG | + | chr3.4:71324815-71324834 | MS.gene031884:CDS | 50.0% | |
| TCCACTGGAATCTTGGGCTT+TGG | - | chr3.4:71325755-71325774 | None:intergenic | 50.0% | |
| TGATGCCACAAAGACGTCTG+AGG | + | chr3.4:71323406-71323425 | MS.gene031884:CDS | 50.0% | |
| ! | ACTGGAATCTTGGGCTTTGG+TGG | - | chr3.4:71325752-71325771 | None:intergenic | 50.0% |
| ! | ATACCGGAAATGGCTGGTCA+TGG | + | chr3.4:71323070-71323089 | MS.gene031884:intron | 50.0% |
| ! | GGAGTCTGCATCTTGCCTTT+TGG | - | chr3.4:71324219-71324238 | None:intergenic | 50.0% |
| ! | GGGTAGTCTTCGCCGATTAT+TGG | + | chr3.4:71323858-71323877 | MS.gene031884:CDS | 50.0% |
| ! | TACCGGAAATGGCTGGTCAT+GGG | + | chr3.4:71323071-71323090 | MS.gene031884:intron | 50.0% |
| !! | GTCCGTCCCGTTTGTTTTCA+GGG | - | chr3.4:71324820-71324839 | None:intergenic | 50.0% |
| !! | TGTCCGTCCCGTTTGTTTTC+AGG | - | chr3.4:71324821-71324840 | None:intergenic | 50.0% |
| ACAAAGACGTCTGAGGAGGG+CGG | + | chr3.4:71323413-71323432 | MS.gene031884:CDS | 55.0% | |
| GCCACAAAGACGTCTGAGGA+GGG | + | chr3.4:71323410-71323429 | MS.gene031884:CDS | 55.0% | |
| GGCAAGATGCAGACTCCTGT+TGG | + | chr3.4:71324222-71324241 | MS.gene031884:CDS | 55.0% | |
| TCTGCCACAGTGCTTAGGAG+AGG | + | chr3.4:71323370-71323389 | MS.gene031884:intron | 55.0% | |
| TGCCACAAAGACGTCTGAGG+AGG | + | chr3.4:71323409-71323428 | MS.gene031884:CDS | 55.0% | |
| TGCCCATGACCAGCCATTTC+CGG | - | chr3.4:71323076-71323095 | None:intergenic | 55.0% | |
| ! | GGAATCTTGGGCTTTGGTGG+TGG | - | chr3.4:71325749-71325768 | None:intergenic | 55.0% |
| !! | ATCTTGGGCTTTGGTGGTGG+AGG | - | chr3.4:71325746-71325765 | None:intergenic | 55.0% |
| AAAGACGTCTGAGGAGGGCG+GGG | + | chr3.4:71323415-71323434 | MS.gene031884:CDS | 60.0% | |
| CAAAGACGTCTGAGGAGGGC+GGG | + | chr3.4:71323414-71323433 | MS.gene031884:CDS | 60.0% | |
| CCACAGTGCTTAGGAGAGGC+TGG | + | chr3.4:71323374-71323393 | MS.gene031884:intron | 60.0% | |
| GCACGGGCCAAGGAACTTGA+GGG | + | chr3.4:71325659-71325678 | MS.gene031884:CDS | 60.0% | |
| GCCCTCCTCAGACGTCTTTG+TGG | - | chr3.4:71323414-71323433 | None:intergenic | 60.0% | |
| TCTGAGGAGGGCGGGGAAAA+AGG | + | chr3.4:71323422-71323441 | MS.gene031884:CDS | 60.0% | |
| ! | AGAAACGCGAGAGCGCATGG+CGG | - | chr3.4:71321986-71322005 | None:intergenic | 60.0% |
| ! | CCAGCCTCTCCTAAGCACTG+TGG | - | chr3.4:71323377-71323396 | None:intergenic | 60.0% |
| ! | GTGAGAAACGCGAGAGCGCA+TGG | - | chr3.4:71321989-71322008 | None:intergenic | 60.0% |
| ! | TAGGAAGAAGGCACGGGCCA+AGG | + | chr3.4:71325649-71325668 | MS.gene031884:CDS | 60.0% |
| GGCACGGGCCAAGGAACTTG+AGG | + | chr3.4:71325658-71325677 | MS.gene031884:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.4 | gene | 71321919 | 71326875 | 71321919 | ID=MS.gene031884 |
| chr3.4 | mRNA | 71321919 | 71326875 | 71321919 | ID=MS.gene031884.t1;Parent=MS.gene031884 |
| chr3.4 | exon | 71321919 | 71322224 | 71321919 | ID=MS.gene031884.t1.exon1;Parent=MS.gene031884.t1 |
| chr3.4 | CDS | 71321919 | 71322224 | 71321919 | ID=cds.MS.gene031884.t1;Parent=MS.gene031884.t1 |
| chr3.4 | exon | 71323380 | 71323684 | 71323380 | ID=MS.gene031884.t1.exon2;Parent=MS.gene031884.t1 |
| chr3.4 | CDS | 71323380 | 71323684 | 71323380 | ID=cds.MS.gene031884.t1;Parent=MS.gene031884.t1 |
| chr3.4 | exon | 71323846 | 71323951 | 71323846 | ID=MS.gene031884.t1.exon3;Parent=MS.gene031884.t1 |
| chr3.4 | CDS | 71323846 | 71323951 | 71323846 | ID=cds.MS.gene031884.t1;Parent=MS.gene031884.t1 |
| chr3.4 | exon | 71324048 | 71324398 | 71324048 | ID=MS.gene031884.t1.exon4;Parent=MS.gene031884.t1 |
| chr3.4 | CDS | 71324048 | 71324398 | 71324048 | ID=cds.MS.gene031884.t1;Parent=MS.gene031884.t1 |
| chr3.4 | exon | 71324619 | 71324701 | 71324619 | ID=MS.gene031884.t1.exon5;Parent=MS.gene031884.t1 |
| chr3.4 | CDS | 71324619 | 71324701 | 71324619 | ID=cds.MS.gene031884.t1;Parent=MS.gene031884.t1 |
| chr3.4 | exon | 71324781 | 71324905 | 71324781 | ID=MS.gene031884.t1.exon6;Parent=MS.gene031884.t1 |
| chr3.4 | CDS | 71324781 | 71324905 | 71324781 | ID=cds.MS.gene031884.t1;Parent=MS.gene031884.t1 |
| chr3.4 | exon | 71325633 | 71325920 | 71325633 | ID=MS.gene031884.t1.exon7;Parent=MS.gene031884.t1 |
| chr3.4 | CDS | 71325633 | 71325920 | 71325633 | ID=cds.MS.gene031884.t1;Parent=MS.gene031884.t1 |
| chr3.4 | exon | 71326856 | 71326875 | 71326856 | ID=MS.gene031884.t1.exon8;Parent=MS.gene031884.t1 |
| chr3.4 | CDS | 71326856 | 71326875 | 71326856 | ID=cds.MS.gene031884.t1;Parent=MS.gene031884.t1 |
| Gene Sequence |
| Protein sequence |
