Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene008045.t1 | XP_003600920.2 | 97.2 | 251 | 7 | 0 | 86 | 336 | 25 | 275 | 2.20E-133 | 485.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene008045.t1 | Q42440 | 64.9 | 251 | 88 | 0 | 86 | 336 | 25 | 275 | 8.1e-92 | 338.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene008045.t1 | G7JBT1 | 97.2 | 251 | 7 | 0 | 86 | 336 | 25 | 275 | 1.6e-133 | 485.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene008045 | MS.gene82040 | PPI |
| MS.gene008045 | MS.gene82548 | PPI |
| MS.gene031958 | MS.gene008045 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene008045.t1 | MTR_3g070890 | 97.211 | 251 | 7 | 0 | 86 | 336 | 25 | 275 | 1.82e-177 | 492 |
| MS.gene008045.t1 | MTR_3g449480 | 96.813 | 251 | 8 | 0 | 86 | 336 | 55 | 305 | 1.81e-176 | 491 |
| MS.gene008045.t1 | MTR_3g449480 | 96.813 | 251 | 8 | 0 | 86 | 336 | 39 | 289 | 2.54e-176 | 490 |
| MS.gene008045.t1 | MTR_3g449480 | 96.813 | 251 | 8 | 0 | 86 | 336 | 25 | 275 | 2.58e-176 | 489 |
| MS.gene008045.t1 | MTR_3g449480 | 96.813 | 251 | 8 | 0 | 86 | 336 | 25 | 275 | 2.58e-176 | 489 |
| MS.gene008045.t1 | MTR_3g449480 | 96.813 | 251 | 8 | 0 | 86 | 336 | 94 | 344 | 6.06e-175 | 489 |
| MS.gene008045.t1 | MTR_3g449480 | 98.485 | 66 | 1 | 0 | 131 | 196 | 1 | 66 | 1.43e-34 | 129 |
| MS.gene008045.t1 | MTR_3g449480 | 96.813 | 251 | 8 | 0 | 86 | 336 | 193 | 443 | 3.41e-174 | 491 |
| MS.gene008045.t1 | MTR_3g449480 | 96.396 | 111 | 4 | 0 | 86 | 196 | 55 | 165 | 2.03e-65 | 213 |
| MS.gene008045.t1 | MTR_3g449480 | 96.813 | 251 | 8 | 0 | 86 | 336 | 163 | 413 | 5.17e-174 | 489 |
| MS.gene008045.t1 | MTR_3g449480 | 96.396 | 111 | 4 | 0 | 86 | 196 | 25 | 135 | 1.74e-65 | 212 |
| MS.gene008045.t1 | MTR_3g070890 | 98.058 | 206 | 4 | 0 | 131 | 336 | 1 | 206 | 2.23e-145 | 409 |
| MS.gene008045.t1 | MTR_3g449480 | 97.573 | 206 | 5 | 0 | 131 | 336 | 1 | 206 | 5.84e-144 | 405 |
| MS.gene008045.t1 | MTR_3g449480 | 96.591 | 176 | 6 | 0 | 86 | 261 | 39 | 214 | 6.92e-119 | 342 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene008045.t1 | AT1G07780 | 64.940 | 251 | 88 | 0 | 86 | 336 | 25 | 275 | 4.81e-119 | 344 |
| MS.gene008045.t1 | AT1G07780 | 64.940 | 251 | 88 | 0 | 86 | 336 | 25 | 275 | 4.81e-119 | 344 |
| MS.gene008045.t1 | AT1G07780 | 64.940 | 251 | 88 | 0 | 86 | 336 | 25 | 275 | 4.81e-119 | 344 |
| MS.gene008045.t1 | AT1G07780 | 64.940 | 251 | 88 | 0 | 86 | 336 | 25 | 275 | 4.81e-119 | 344 |
| MS.gene008045.t1 | AT1G07780 | 64.940 | 251 | 88 | 0 | 86 | 336 | 25 | 275 | 4.81e-119 | 344 |
| MS.gene008045.t1 | AT1G07780 | 64.940 | 251 | 88 | 0 | 86 | 336 | 25 | 275 | 4.81e-119 | 344 |
| MS.gene008045.t1 | AT1G07780 | 64.940 | 251 | 88 | 0 | 86 | 336 | 25 | 275 | 4.81e-119 | 344 |
| MS.gene008045.t1 | AT1G07780 | 64.940 | 251 | 88 | 0 | 86 | 336 | 25 | 275 | 4.81e-119 | 344 |
| MS.gene008045.t1 | AT5G05590 | 64.940 | 251 | 88 | 0 | 86 | 336 | 25 | 275 | 7.87e-119 | 344 |
| MS.gene008045.t1 | AT1G07780 | 72.330 | 206 | 57 | 0 | 131 | 336 | 1 | 206 | 1.84e-109 | 317 |
| MS.gene008045.t1 | AT1G07780 | 62.500 | 176 | 66 | 0 | 86 | 261 | 25 | 200 | 1.26e-75 | 232 |
| MS.gene008045.t1 | AT1G07780 | 62.500 | 176 | 66 | 0 | 86 | 261 | 25 | 200 | 1.26e-75 | 232 |
| MS.gene008045.t1 | AT5G05590 | 62.500 | 176 | 66 | 0 | 86 | 261 | 25 | 200 | 1.58e-75 | 232 |
| MS.gene008045.t1 | AT1G07780 | 62.500 | 176 | 66 | 0 | 86 | 261 | 25 | 200 | 1.90e-75 | 231 |
| MS.gene008045.t1 | AT1G07780 | 62.500 | 176 | 66 | 0 | 86 | 261 | 25 | 200 | 1.90e-75 | 231 |
| MS.gene008045.t1 | AT5G05590 | 62.500 | 176 | 66 | 0 | 86 | 261 | 25 | 200 | 2.52e-75 | 231 |
| MS.gene008045.t1 | AT1G29410 | 61.364 | 176 | 68 | 0 | 86 | 261 | 4 | 179 | 1.54e-73 | 226 |
| MS.gene008045.t1 | AT1G29410 | 61.364 | 176 | 68 | 0 | 86 | 261 | 4 | 179 | 1.84e-73 | 226 |
| MS.gene008045.t1 | AT1G29410 | 61.364 | 176 | 68 | 0 | 86 | 261 | 4 | 179 | 1.84e-73 | 226 |
| MS.gene008045.t1 | AT1G29410 | 59.563 | 183 | 74 | 0 | 79 | 261 | 18 | 200 | 2.11e-73 | 226 |
| MS.gene008045.t1 | AT1G29410 | 59.563 | 183 | 74 | 0 | 79 | 261 | 18 | 200 | 2.11e-73 | 226 |
| MS.gene008045.t1 | AT1G29410 | 61.364 | 176 | 68 | 0 | 86 | 261 | 25 | 200 | 2.78e-73 | 227 |
| MS.gene008045.t1 | AT1G29410 | 61.364 | 176 | 68 | 0 | 86 | 261 | 25 | 200 | 2.78e-73 | 227 |
| MS.gene008045.t1 | AT5G05590 | 53.398 | 206 | 66 | 1 | 86 | 261 | 25 | 230 | 1.65e-69 | 218 |
Find 81 sgRNAs with CRISPR-Local
Find 299 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CATCAGGAATTGTGTTTAAA+AGG | 0.166323 | 3.3:-61886111 | None:intergenic |
| TGGAACTCCCTTACCTCTTT+TGG | 0.205538 | 3.3:+61885295 | MS.gene008045:CDS |
| ATCATACAAGGAGTACAAAT+TGG | 0.210922 | 3.3:-61885456 | None:intergenic |
| TTGTACTCCTTGTATGATTT+TGG | 0.233780 | 3.3:+61885461 | MS.gene008045:CDS |
| GAAGCTGGAGCAAACTTTAT+TGG | 0.273537 | 3.3:+61885750 | MS.gene008045:CDS |
| TCCTCTAGTTGATTGGGTTC+TGG | 0.309444 | 3.3:+61886141 | MS.gene008045:CDS |
| AGCTTTCCCATCTTTGATTC+AGG | 0.337440 | 3.3:+61886045 | MS.gene008045:CDS |
| TGCCAACTCAGTATGTTTGC+AGG | 0.343244 | 3.3:-61885634 | None:intergenic |
| GCTGCTATGGCGGCCGAAGC+TGG | 0.347935 | 3.3:+61885735 | MS.gene008045:CDS |
| ACTTGAAAAGATTAAGCCTT+TGG | 0.355111 | 3.3:+61885680 | MS.gene008045:CDS |
| GGGGTGGGTGTGTTCGGATA+TGG | 0.356830 | 3.3:+61885226 | MS.gene008045:CDS |
| TTTAGAGGGGTGGGTGTGTT+CGG | 0.357031 | 3.3:+61885220 | MS.gene008045:intron |
| GTTTGGACAATGCAGCTTCA+TGG | 0.372122 | 3.3:+61886007 | MS.gene008045:intron |
| ATCAAGAATAGCTTCCTTCA+TGG | 0.376096 | 3.3:+61886462 | MS.gene008045:CDS |
| ATATGGTGGATTCGTGGAAT+TGG | 0.378729 | 3.3:+61885243 | MS.gene008045:CDS |
| AAGAGTGTCCTCTAGTTGAT+TGG | 0.386882 | 3.3:+61886134 | MS.gene008045:CDS |
| TCATACAAGGAGTACAAATT+GGG | 0.388498 | 3.3:-61885455 | None:intergenic |
| TTCAACAACTGGGAGTTACT+TGG | 0.396508 | 3.3:+61883941 | MS.gene008045:CDS |
| ACAATGCAGCTTCATGGATC+TGG | 0.426005 | 3.3:+61886013 | MS.gene008045:intron |
| CAGTGGTGAAGCATTCGATT+GGG | 0.429512 | 3.3:+61886282 | MS.gene008045:intron |
| ATAATTTCTGTAGGTTTGAA+AGG | 0.437678 | 3.3:+61885561 | MS.gene008045:intron |
| TTGCAGGAAACTTCATACTT+TGG | 0.439151 | 3.3:-61885618 | None:intergenic |
| AATAAAGTTTGCTCCAGCTT+CGG | 0.441656 | 3.3:-61885748 | None:intergenic |
| AGCTTCATGGATCTGGTTCG+CGG | 0.464460 | 3.3:+61886020 | MS.gene008045:intron |
| TCATCCACAAATACTCCAAC+AGG | 0.465466 | 3.3:-61885861 | None:intergenic |
| TTCCACAAAAGACCGATTCC+AGG | 0.472417 | 3.3:+61883981 | MS.gene008045:CDS |
| TCCAATTCCACTCGTAAAAG+AGG | 0.474672 | 3.3:-61885276 | None:intergenic |
| AAGCAAATATGGTTGGCTCT+TGG | 0.483948 | 3.3:+61886330 | MS.gene008045:CDS |
| AGAGTGTCCTCTAGTTGATT+GGG | 0.483984 | 3.3:+61886135 | MS.gene008045:CDS |
| ACTAGAGGACACTCTTCATC+AGG | 0.491260 | 3.3:-61886127 | None:intergenic |
| GTGGGTGTGTTCGGATATGG+TGG | 0.493398 | 3.3:+61885229 | MS.gene008045:CDS |
| AAATATGGTTGGCTCTTGGC+AGG | 0.497385 | 3.3:+61886334 | MS.gene008045:CDS |
| TGTTTCACTTTCTGTTGCAA+AGG | 0.498388 | 3.3:+61885803 | MS.gene008045:CDS |
| AAAGCCTCACGAACATTCTC+AGG | 0.505756 | 3.3:-61886367 | None:intergenic |
| TCAAAAGTTGCAAGAGATTG+TGG | 0.507409 | 3.3:+61885831 | MS.gene008045:CDS |
| TAGATAGTGCAAAGGGTGGC+AGG | 0.516369 | 3.3:+61886164 | MS.gene008045:CDS |
| AGAGCCTGTTGGAGTATTTG+TGG | 0.521575 | 3.3:+61885857 | MS.gene008045:CDS |
| ATCAAATCTTGAGTTTGTGC+AGG | 0.523243 | 3.3:+61885917 | MS.gene008045:CDS |
| GCAGTGGTGAAGCATTCGAT+TGG | 0.523251 | 3.3:+61886281 | MS.gene008045:intron |
| AAATGTTTCATGTTCATCAA+AGG | 0.525170 | 3.3:+61885656 | MS.gene008045:CDS |
| ATCAGCTAAAGATGCTGCTA+TGG | 0.526392 | 3.3:+61885722 | MS.gene008045:CDS |
| GCTTCATGGATCTGGTTCGC+GGG | 0.535795 | 3.3:+61886021 | MS.gene008045:intron |
| AAGACCAGACTACCTGGAAT+CGG | 0.536235 | 3.3:-61883993 | None:intergenic |
| TCCACTCGTAAAAGAGGCAA+GGG | 0.536949 | 3.3:-61885270 | None:intergenic |
| AAGCCTTTGGTTAAGATGTG+TGG | 0.545538 | 3.3:+61885693 | MS.gene008045:CDS |
| GGCTCCCATCAGCATTTGCA+TGG | 0.555209 | 3.3:-61886090 | None:intergenic |
| TTCCTGCAAACATACTGAGT+TGG | 0.558872 | 3.3:+61885632 | MS.gene008045:CDS |
| CTACTGACATCCACTCCTCC+AGG | 0.559568 | 3.3:-61886403 | None:intergenic |
| GTTCTCCATGCAAATGCTGA+TGG | 0.559769 | 3.3:+61886085 | MS.gene008045:CDS |
| AAATTAGAAGCAAATATGGT+TGG | 0.569037 | 3.3:+61886323 | MS.gene008045:CDS |
| TTCCACTCGTAAAAGAGGCA+AGG | 0.570721 | 3.3:-61885271 | None:intergenic |
| AGAACCTCTCACTGTTTCCA+TGG | 0.572208 | 3.3:-61883437 | None:intergenic |
| TAGTCTCAAACCTGGAGGAG+TGG | 0.574489 | 3.3:+61886393 | MS.gene008045:CDS |
| TTTGTGCAGGTTCAACAACT+GGG | 0.577919 | 3.3:+61883931 | MS.gene008045:intron |
| GATTGTGGAGCAGAGCCTGT+TGG | 0.580954 | 3.3:+61885846 | MS.gene008045:CDS |
| GTTCGGATATGGTGGATTCG+TGG | 0.582221 | 3.3:+61885237 | MS.gene008045:CDS |
| ATGGTTGGCTCTTGGCAGGA+GGG | 0.589722 | 3.3:+61886338 | MS.gene008045:CDS |
| AGAATGTACTGCATCCATGA+AGG | 0.601091 | 3.3:-61886476 | None:intergenic |
| TGCATCAGATGGCATTCAGA+AGG | 0.604378 | 3.3:+61886435 | MS.gene008045:CDS |
| TATGGTTGGCTCTTGGCAGG+AGG | 0.607292 | 3.3:+61886337 | MS.gene008045:CDS |
| TTCTCCATGCAAATGCTGAT+GGG | 0.608881 | 3.3:+61886086 | MS.gene008045:CDS |
| GTTCTGGTAGATAGTGCAAA+GGG | 0.610316 | 3.3:+61886157 | MS.gene008045:CDS |
| AGCGGCATATGTGCATCAGA+TGG | 0.611930 | 3.3:+61886424 | MS.gene008045:CDS |
| AAGAGACAAAACAAATACGA+AGG | 0.612568 | 3.3:-61885426 | None:intergenic |
| AGCTAAAGATGCTGCTATGG+CGG | 0.622801 | 3.3:+61885725 | MS.gene008045:CDS |
| GCTTTGTCTAGTCTCAAACC+TGG | 0.631502 | 3.3:+61886385 | MS.gene008045:CDS |
| GGTTCTGGTAGATAGTGCAA+AGG | 0.632272 | 3.3:+61886156 | MS.gene008045:CDS |
| CAAGGAGTACAAATTGGGGA+GGG | 0.634974 | 3.3:-61885450 | None:intergenic |
| ACTTTATTGGAATGATCGTG+TGG | 0.636931 | 3.3:+61885763 | MS.gene008045:CDS |
| ACAAGGAGTACAAATTGGGG+AGG | 0.638971 | 3.3:-61885451 | None:intergenic |
| ATGCCACACATCTTAACCAA+AGG | 0.642355 | 3.3:-61885696 | None:intergenic |
| TTAACCACCAAAATCATACA+AGG | 0.643616 | 3.3:-61885468 | None:intergenic |
| ACCAGAACCCAATCAACTAG+AGG | 0.654201 | 3.3:-61886142 | None:intergenic |
| CATACAAGGAGTACAAATTG+GGG | 0.657722 | 3.3:-61885454 | None:intergenic |
| CAATCCTGAGAATGTTCGTG+AGG | 0.659098 | 3.3:+61886363 | MS.gene008045:CDS |
| AGAGACAAAACAAATACGAA+GGG | 0.667238 | 3.3:-61885425 | None:intergenic |
| CCACTCGTAAAAGAGGCAAG+GGG | 0.668551 | 3.3:-61885269 | None:intergenic |
| GGAGGAGTGGATGTCAGTAG+CGG | 0.679932 | 3.3:+61886406 | MS.gene008045:CDS |
| CACTCGTAAAAGAGGCAAGG+GGG | 0.687217 | 3.3:-61885268 | None:intergenic |
| CTGGTAGATAGTGCAAAGGG+TGG | 0.687302 | 3.3:+61886160 | MS.gene008045:CDS |
| TTGTCTAGTCTCAAACCTGG+AGG | 0.687383 | 3.3:+61886388 | MS.gene008045:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ACTAAAAAAAAAAGATTGTT+TGG | - | chr3.3:61886228-61886247 | None:intergenic | 15.0% |
| !! | GATTTAAATATAATTTCTGT+AGG | + | chr3.3:61885552-61885571 | MS.gene008045:intron | 15.0% |
| !! | TGTATAAAGTATAAATTCAA+TGG | - | chr3.3:61883477-61883496 | None:intergenic | 15.0% |
| !!! | AATTTTTGGTAATTTAAACT+GGG | - | chr3.3:61886308-61886327 | None:intergenic | 15.0% |
| !!! | TAATTTTTGGTAATTTAAAC+TGG | - | chr3.3:61886309-61886328 | None:intergenic | 15.0% |
| !! | AATTTCTAACTAATTCTTCT+AGG | + | chr3.3:61883766-61883785 | MS.gene008045:intron | 20.0% |
| !! | ACTTTATACACATAATTATG+AGG | + | chr3.3:61883487-61883506 | MS.gene008045:intron | 20.0% |
| !! | CAATTAATAAAAAACCAATC+CGG | - | chr3.3:61884875-61884894 | None:intergenic | 20.0% |
| !! | TCTATAAAAGTTGTTTGATT+GGG | + | chr3.3:61884349-61884368 | MS.gene008045:intron | 20.0% |
| !! | TTCTATAAAAGTTGTTTGAT+TGG | + | chr3.3:61884348-61884367 | MS.gene008045:intron | 20.0% |
| !! | TTCTTTAAACTTTCAATCAA+AGG | - | chr3.3:61884501-61884520 | None:intergenic | 20.0% |
| !!! | AAGTTCTTTTTTGTAAATAC+GGG | + | chr3.3:61884847-61884866 | MS.gene008045:intron | 20.0% |
| !!! | GAAGTTCTTTTTTGTAAATA+CGG | + | chr3.3:61884846-61884865 | MS.gene008045:intron | 20.0% |
| ! | AAAAAAGAGAGGTAGAAAAT+AGG | - | chr3.3:61884603-61884622 | None:intergenic | 25.0% |
| ! | AAAACAAAAAAGTCCAAAAG+AGG | - | chr3.3:61885311-61885330 | None:intergenic | 25.0% |
| ! | AAAACAAATTTCGAAGTACA+AGG | + | chr3.3:61885517-61885536 | MS.gene008045:intron | 25.0% |
| ! | AAATGTTTCATGTTCATCAA+AGG | + | chr3.3:61885656-61885675 | MS.gene008045:CDS | 25.0% |
| ! | AAATTAGAAGCAAATATGGT+TGG | + | chr3.3:61886323-61886342 | MS.gene008045:CDS | 25.0% |
| ! | AACTTTATGAATTGTAGAGA+GGG | + | chr3.3:61884408-61884427 | MS.gene008045:intron | 25.0% |
| ! | ATAATTTCTGTAGGTTTGAA+AGG | + | chr3.3:61885561-61885580 | MS.gene008045:intron | 25.0% |
| ! | CCAAAAATTAGAAGCAAATA+TGG | + | chr3.3:61886319-61886338 | MS.gene008045:CDS | 25.0% |
| ! | CTATAAAAGTTGTTTGATTG+GGG | + | chr3.3:61884350-61884369 | MS.gene008045:intron | 25.0% |
| ! | TAATTGTGTATGCAAATTTG+TGG | + | chr3.3:61884889-61884908 | MS.gene008045:intron | 25.0% |
| ! | TAGAGTCCATAAAATATCTA+CGG | - | chr3.3:61884280-61884299 | None:intergenic | 25.0% |
| ! | TCTTGATTAGGATATCTTTA+TGG | - | chr3.3:61883672-61883691 | None:intergenic | 25.0% |
| !! | AGAGATTAGTTAATGCATTT+AGG | - | chr3.3:61883808-61883827 | None:intergenic | 25.0% |
| !! | AGATATTTTATGGACTCTAA+AGG | + | chr3.3:61884281-61884300 | MS.gene008045:intron | 25.0% |
| !! | CCATATTTGCTTCTAATTTT+TGG | - | chr3.3:61886322-61886341 | None:intergenic | 25.0% |
| !!! | CAATTTTCTAGCATAAGATT+CGG | + | chr3.3:61885594-61885613 | MS.gene008045:CDS | 25.0% |
| !!! | TATATTGTTTGAAAGCATCA+TGG | + | chr3.3:61884117-61884136 | MS.gene008045:intron | 25.0% |
| AAAAAAGTCCAAAAGAGGTA+AGG | - | chr3.3:61885306-61885325 | None:intergenic | 30.0% | |
| AAAAAGTCCAAAAGAGGTAA+GGG | - | chr3.3:61885305-61885324 | None:intergenic | 30.0% | |
| AAAGAAGAAGCTAAACTCTT+GGG | + | chr3.3:61884515-61884534 | MS.gene008045:intron | 30.0% | |
| AAGAGACAAAACAAATACGA+AGG | - | chr3.3:61885429-61885448 | None:intergenic | 30.0% | |
| AATAGGAATTGCATTCAACA+CGG | - | chr3.3:61884586-61884605 | None:intergenic | 30.0% | |
| ACTTGAAAAGATTAAGCCTT+TGG | + | chr3.3:61885680-61885699 | MS.gene008045:CDS | 30.0% | |
| AGAGACAAAACAAATACGAA+GGG | - | chr3.3:61885428-61885447 | None:intergenic | 30.0% | |
| AGAGGAAATAAGCATCAATA+CGG | + | chr3.3:61884198-61884217 | MS.gene008045:intron | 30.0% | |
| AGTTTAGTGGAGAATCTTAT+GGG | + | chr3.3:61885194-61885213 | MS.gene008045:intron | 30.0% | |
| ATTCAACGAGAATTTCTATG+GGG | + | chr3.3:61884660-61884679 | MS.gene008045:intron | 30.0% | |
| CAACTTTATGAATTGTAGAG+AGG | + | chr3.3:61884407-61884426 | MS.gene008045:intron | 30.0% | |
| CACAAGAACAATAATGTACA+TGG | - | chr3.3:61883889-61883908 | None:intergenic | 30.0% | |
| CATCAGGAATTGTGTTTAAA+AGG | - | chr3.3:61886114-61886133 | None:intergenic | 30.0% | |
| GATTCAACGAGAATTTCTAT+GGG | + | chr3.3:61884659-61884678 | MS.gene008045:intron | 30.0% | |
| TAAAGAAGAAGCTAAACTCT+TGG | + | chr3.3:61884514-61884533 | MS.gene008045:intron | 30.0% | |
| TAGTTAATGCATTTAGGAGT+CGG | - | chr3.3:61883802-61883821 | None:intergenic | 30.0% | |
| TGACATTGAAATCTTGAGTT+TGG | + | chr3.3:61885990-61886009 | MS.gene008045:intron | 30.0% | |
| TGAGGCTTTCATTTAAATAG+TGG | - | chr3.3:61884168-61884187 | None:intergenic | 30.0% | |
| TTAAATGAAAGCCTCATGAA+GGG | + | chr3.3:61884172-61884191 | MS.gene008045:intron | 30.0% | |
| TTAACCACCAAAATCATACA+AGG | - | chr3.3:61885471-61885490 | None:intergenic | 30.0% | |
| TTAGAAATTGAGAAGAGTCT+CGG | - | chr3.3:61885077-61885096 | None:intergenic | 30.0% | |
| TTTAAATGAAAGCCTCATGA+AGG | + | chr3.3:61884171-61884190 | MS.gene008045:intron | 30.0% | |
| ! | AAAAGAAAACCTAACTTGCA+AGG | - | chr3.3:61883913-61883932 | None:intergenic | 30.0% |
| ! | AAGCATTAGCTTACAATAAG+AGG | - | chr3.3:61883546-61883565 | None:intergenic | 30.0% |
| ! | ATCATACAAGGAGTACAAAT+TGG | - | chr3.3:61885459-61885478 | None:intergenic | 30.0% |
| ! | GATTTTCCTGAATCAAAGAT+GGG | - | chr3.3:61886054-61886073 | None:intergenic | 30.0% |
| ! | TCATACAAGGAGTACAAATT+GGG | - | chr3.3:61885458-61885477 | None:intergenic | 30.0% |
| ! | TTGTACTCCTTGTATGATTT+TGG | + | chr3.3:61885461-61885480 | MS.gene008045:CDS | 30.0% |
| !! | TTTTGGTTAGATCATTGGAT+GGG | + | chr3.3:61885026-61885045 | MS.gene008045:intron | 30.0% |
| AAATAAGCATCAATACGGGT+TGG | + | chr3.3:61884203-61884222 | MS.gene008045:intron | 35.0% | |
| AAATGTGGAAGAGAATTGTG+AGG | + | chr3.3:61884637-61884656 | MS.gene008045:intron | 35.0% | |
| AACAAATATGTGAGTCTAGG+AGG | + | chr3.3:61884540-61884559 | MS.gene008045:intron | 35.0% | |
| AACCAAAAAGACGCTTTAGT+GGG | + | chr3.3:61885095-61885114 | MS.gene008045:intron | 35.0% | |
| AAGAAGAAGCTAAACTCTTG+GGG | + | chr3.3:61884516-61884535 | MS.gene008045:intron | 35.0% | |
| AAGCTAATGCTTGATTTCCA+TGG | + | chr3.3:61883554-61883573 | MS.gene008045:intron | 35.0% | |
| AATCTTATGGGGGATTTAGA+GGG | + | chr3.3:61885206-61885225 | MS.gene008045:intron | 35.0% | |
| ACAAATATGTGAGTCTAGGA+GGG | + | chr3.3:61884541-61884560 | MS.gene008045:intron | 35.0% | |
| ACTTTATTGGAATGATCGTG+TGG | + | chr3.3:61885763-61885782 | MS.gene008045:CDS | 35.0% | |
| AGAGAAGAAGAGAGAATTTG+TGG | + | chr3.3:61883689-61883708 | MS.gene008045:intron | 35.0% | |
| ATCAAATCTTGAGTTTGTGC+AGG | + | chr3.3:61885917-61885936 | MS.gene008045:CDS | 35.0% | |
| ATCAAGAATAGCTTCCTTCA+TGG | + | chr3.3:61886462-61886481 | MS.gene008045:CDS | 35.0% | |
| CATGAAACTAAACCTACATG+AGG | - | chr3.3:61884089-61884108 | None:intergenic | 35.0% | |
| CGTTGAACATGCATAAAAGT+CGG | - | chr3.3:61885954-61885973 | None:intergenic | 35.0% | |
| GAGGAAATAAGCATCAATAC+GGG | + | chr3.3:61884199-61884218 | MS.gene008045:intron | 35.0% | |
| GAGTTTAGTGGAGAATCTTA+TGG | + | chr3.3:61885193-61885212 | MS.gene008045:intron | 35.0% | |
| GCAATGTTTACCAAGCAAAT+TGG | - | chr3.3:61883719-61883738 | None:intergenic | 35.0% | |
| GGATTCAACGAGAATTTCTA+TGG | + | chr3.3:61884658-61884677 | MS.gene008045:intron | 35.0% | |
| GTTGAACATGCATAAAAGTC+GGG | - | chr3.3:61885953-61885972 | None:intergenic | 35.0% | |
| GTTTAGTGGAGAATCTTATG+GGG | + | chr3.3:61885195-61885214 | MS.gene008045:intron | 35.0% | |
| TAAATAAAGACCAGACTACC+TGG | - | chr3.3:61884002-61884021 | None:intergenic | 35.0% | |
| TAACCAAAAAGACGCTTTAG+TGG | + | chr3.3:61885094-61885113 | MS.gene008045:intron | 35.0% | |
| TCAAAAGTTGCAAGAGATTG+TGG | + | chr3.3:61885831-61885850 | MS.gene008045:CDS | 35.0% | |
| TCCAATGATCTAACCAAAAC+CGG | - | chr3.3:61885025-61885044 | None:intergenic | 35.0% | |
| TCTCGGATAAGAAACACAAA+GGG | - | chr3.3:61885060-61885079 | None:intergenic | 35.0% | |
| TCTCTCCCGTTTAAGTATTT+GGG | + | chr3.3:61884432-61884451 | MS.gene008045:intron | 35.0% | |
| TCTCTCTTCTTCTCTTGATT+AGG | - | chr3.3:61883684-61883703 | None:intergenic | 35.0% | |
| TGAGTATATTGTCTCTCTTC+TGG | + | chr3.3:61884023-61884042 | MS.gene008045:intron | 35.0% | |
| TGATTTCCATGGTGACAAAT+TGG | + | chr3.3:61883565-61883584 | MS.gene008045:intron | 35.0% | |
| TGTTTCACTTTCTGTTGCAA+AGG | + | chr3.3:61885803-61885822 | MS.gene008045:CDS | 35.0% | |
| TGTTTGATTGGGGTTAATGT+TGG | + | chr3.3:61884360-61884379 | MS.gene008045:intron | 35.0% | |
| TTCAACGACAGTTAAATGCT+TGG | + | chr3.3:61885967-61885986 | MS.gene008045:intron | 35.0% | |
| TTGCAGGAAACTTCATACTT+TGG | - | chr3.3:61885621-61885640 | None:intergenic | 35.0% | |
| TTGTTAGGTAAAGTGGAAGA+CGG | + | chr3.3:61884707-61884726 | MS.gene008045:intron | 35.0% | |
| TTTAGTGGAGAATCTTATGG+GGG | + | chr3.3:61885196-61885215 | MS.gene008045:intron | 35.0% | |
| TTTGGACAAGAATGAGATTG+AGG | + | chr3.3:61883598-61883617 | MS.gene008045:intron | 35.0% | |
| TTTGGGAGTTAGAGATGTTA+GGG | + | chr3.3:61884755-61884774 | MS.gene008045:intron | 35.0% | |
| ! | AATAAAGTTTGCTCCAGCTT+CGG | - | chr3.3:61885751-61885770 | None:intergenic | 35.0% |
| ! | AGGCATCCGTAGATATTTTA+TGG | + | chr3.3:61884271-61884290 | MS.gene008045:intron | 35.0% |
| ! | ATTCTCTTCCACATTTTCAC+CGG | - | chr3.3:61884633-61884652 | None:intergenic | 35.0% |
| ! | CAAATTGGCTTCACTGAATT+TGG | + | chr3.3:61883580-61883599 | MS.gene008045:intron | 35.0% |
| ! | CATACAAGGAGTACAAATTG+GGG | - | chr3.3:61885457-61885476 | None:intergenic | 35.0% |
| ! | CGATTTTCCTGAATCAAAGA+TGG | - | chr3.3:61886055-61886074 | None:intergenic | 35.0% |
| ! | GCATTTTCACTTGACAAAGA+AGG | + | chr3.3:61883514-61883533 | MS.gene008045:intron | 35.0% |
| ! | GTGCTTGCATTTCTGTTTTA+GGG | + | chr3.3:61885386-61885405 | MS.gene008045:intron | 35.0% |
| ! | GTTAGGTTTTCTTTTTGTGC+AGG | + | chr3.3:61883918-61883937 | MS.gene008045:intron | 35.0% |
| ! | TACTCCTTGTATGATTTTGG+TGG | + | chr3.3:61885464-61885483 | MS.gene008045:CDS | 35.0% |
| ! | TGTGCTTGCATTTCTGTTTT+AGG | + | chr3.3:61885385-61885404 | MS.gene008045:intron | 35.0% |
| ! | TGTTTTCTGTCTTCAGATGT+AGG | + | chr3.3:61885325-61885344 | MS.gene008045:CDS | 35.0% |
| ! | TTGTGGTAAACCAATTTGCT+TGG | + | chr3.3:61883706-61883725 | MS.gene008045:intron | 35.0% |
| !! | AGAAGGTTTGTTAGGTAAAG+TGG | + | chr3.3:61884700-61884719 | MS.gene008045:intron | 35.0% |
| !! | TCCGATACAAAGAGTATCAT+CGG | - | chr3.3:61884250-61884269 | None:intergenic | 35.0% |
| !! | TTTGAAAGCATCATGGATCT+AGG | + | chr3.3:61884124-61884143 | MS.gene008045:intron | 35.0% |
| !!! | CCTCTCTTTTTTCAAAATGC+CGG | + | chr3.3:61884611-61884630 | MS.gene008045:intron | 35.0% |
| !!! | GAAACAGAACGTTTTGAGTT+TGG | - | chr3.3:61885789-61885808 | None:intergenic | 35.0% |
| !!! | GTTTTGGTTAGATCATTGGA+TGG | + | chr3.3:61885025-61885044 | MS.gene008045:intron | 35.0% |
| !!! | TTTTTTGTAAATACGGGAGC+CGG | + | chr3.3:61884853-61884872 | MS.gene008045:intron | 35.0% |
| AAGCCTTTGGTTAAGATGTG+TGG | + | chr3.3:61885693-61885712 | MS.gene008045:CDS | 40.0% | |
| AGAATGTACTGCATCCATGA+AGG | - | chr3.3:61886479-61886498 | None:intergenic | 40.0% | |
| AGATCATTGGATGGGAAATG+CGG | + | chr3.3:61885034-61885053 | MS.gene008045:intron | 40.0% | |
| AGCTTTCCCATCTTTGATTC+AGG | + | chr3.3:61886045-61886064 | MS.gene008045:CDS | 40.0% | |
| ATCAGCTAAAGATGCTGCTA+TGG | + | chr3.3:61885722-61885741 | MS.gene008045:CDS | 40.0% | |
| ATCTTATGGGGGATTTAGAG+GGG | + | chr3.3:61885207-61885226 | MS.gene008045:intron | 40.0% | |
| ATGCCACACATCTTAACCAA+AGG | - | chr3.3:61885699-61885718 | None:intergenic | 40.0% | |
| CCAAGTAGCTACATGAATTG+TGG | - | chr3.3:61883839-61883858 | None:intergenic | 40.0% | |
| CCAATGATCTAACCAAAACC+GGG | - | chr3.3:61885024-61885043 | None:intergenic | 40.0% | |
| CCACAATTCATGTAGCTACT+TGG | + | chr3.3:61883836-61883855 | MS.gene008045:intron | 40.0% | |
| CTCATGAGATGTATTTGCAG+TGG | + | chr3.3:61886265-61886284 | MS.gene008045:intron | 40.0% | |
| CTCTCCCGTTTAAGTATTTG+GGG | + | chr3.3:61884433-61884452 | MS.gene008045:intron | 40.0% | |
| CTCTCTCCCGTTTAAGTATT+TGG | + | chr3.3:61884431-61884450 | MS.gene008045:intron | 40.0% | |
| GAAGCTGGAGCAAACTTTAT+TGG | + | chr3.3:61885750-61885769 | MS.gene008045:CDS | 40.0% | |
| GAATCTTATGGGGGATTTAG+AGG | + | chr3.3:61885205-61885224 | MS.gene008045:intron | 40.0% | |
| GATTGGGGTTAATGTTGGAA+GGG | + | chr3.3:61884365-61884384 | MS.gene008045:intron | 40.0% | |
| GCACTTGGAATCTTATATGG+AGG | + | chr3.3:61885147-61885166 | MS.gene008045:intron | 40.0% | |
| GCCGATGATACTCTTTGTAT+CGG | + | chr3.3:61884246-61884265 | MS.gene008045:intron | 40.0% | |
| GGCAACAAATATGTGAGTCT+AGG | + | chr3.3:61884537-61884556 | MS.gene008045:intron | 40.0% | |
| GGTAGCCCCAAATACTTAAA+CGG | - | chr3.3:61884441-61884460 | None:intergenic | 40.0% | |
| GTAGCACTTATTCCTCATGT+AGG | + | chr3.3:61884074-61884093 | MS.gene008045:intron | 40.0% | |
| GTAGCCCCAAATACTTAAAC+GGG | - | chr3.3:61884440-61884459 | None:intergenic | 40.0% | |
| GTCTCGGATAAGAAACACAA+AGG | - | chr3.3:61885061-61885080 | None:intergenic | 40.0% | |
| GTTCTGGTAGATAGTGCAAA+GGG | + | chr3.3:61886157-61886176 | MS.gene008045:CDS | 40.0% | |
| GTTTGGGAGTTAGAGATGTT+AGG | + | chr3.3:61884754-61884773 | MS.gene008045:intron | 40.0% | |
| TAATGTTGGAAGGGAGTTCA+TGG | + | chr3.3:61884374-61884393 | MS.gene008045:intron | 40.0% | |
| TCAAAATGCCGGTGAAAATG+TGG | + | chr3.3:61884622-61884641 | MS.gene008045:intron | 40.0% | |
| TCATCCACAAATACTCCAAC+AGG | - | chr3.3:61885864-61885883 | None:intergenic | 40.0% | |
| TCCAATTCCACTCGTAAAAG+AGG | - | chr3.3:61885279-61885298 | None:intergenic | 40.0% | |
| TGATACTCTTTGTATCGGAG+AGG | + | chr3.3:61884251-61884270 | MS.gene008045:intron | 40.0% | |
| TGATTGGGGTTAATGTTGGA+AGG | + | chr3.3:61884364-61884383 | MS.gene008045:intron | 40.0% | |
| TTCAACAACTGGGAGTTACT+TGG | + | chr3.3:61883941-61883960 | MS.gene008045:CDS | 40.0% | |
| TTCCTGCAAACATACTGAGT+TGG | + | chr3.3:61885632-61885651 | MS.gene008045:CDS | 40.0% | |
| TTCTCCATGCAAATGCTGAT+GGG | + | chr3.3:61886086-61886105 | MS.gene008045:CDS | 40.0% | |
| TTCTTGTGACCTTGCAAGTT+AGG | + | chr3.3:61883901-61883920 | MS.gene008045:intron | 40.0% | |
| TTGGATGTGGTAACTTTGGA+AGG | + | chr3.3:61884936-61884955 | MS.gene008045:intron | 40.0% | |
| TTTGTGCAGGTTCAACAACT+GGG | + | chr3.3:61883931-61883950 | MS.gene008045:intron | 40.0% | |
| ! | AAGCAAATATGGTTGGCTCT+TGG | + | chr3.3:61886330-61886349 | MS.gene008045:CDS | 40.0% |
| ! | AGAGTGTCCTCTAGTTGATT+GGG | + | chr3.3:61886135-61886154 | MS.gene008045:CDS | 40.0% |
| ! | GAGGCACTTGGAATCTTATA+TGG | + | chr3.3:61885144-61885163 | MS.gene008045:intron | 40.0% |
| ! | GGGTGCGAATTGGTTTAATA+CGG | + | chr3.3:61884965-61884984 | MS.gene008045:intron | 40.0% |
| ! | GTTTAAGTATTTGGGGCTAC+CGG | + | chr3.3:61884440-61884459 | MS.gene008045:intron | 40.0% |
| ! | TGCGAATTGGTTTAATACGG+AGG | + | chr3.3:61884968-61884987 | MS.gene008045:intron | 40.0% |
| ! | TTTAGGGTCACTGGTATATC+AGG | + | chr3.3:61885402-61885421 | MS.gene008045:intron | 40.0% |
| ! | TTTTGTGCAGGTTCAACAAC+TGG | + | chr3.3:61883930-61883949 | MS.gene008045:intron | 40.0% |
| !! | AAGAGTGTCCTCTAGTTGAT+TGG | + | chr3.3:61886134-61886153 | MS.gene008045:CDS | 40.0% |
| !! | ATATGGTGGATTCGTGGAAT+TGG | + | chr3.3:61885243-61885262 | MS.gene008045:CDS | 40.0% |
| !! | CCGGCATTTTGAAAAAAGAG+AGG | - | chr3.3:61884614-61884633 | None:intergenic | 40.0% |
| !! | TTCAGCCTCTATTGAGTTGA+GGG | + | chr3.3:61883631-61883650 | MS.gene008045:intron | 40.0% |
| !!! | CATTTCTGTTTTAGGGTCAC+TGG | + | chr3.3:61885393-61885412 | MS.gene008045:intron | 40.0% |
| !!! | GTTGCTTAGAGGTTTTGAGA+TGG | + | chr3.3:61884305-61884324 | MS.gene008045:intron | 40.0% |
| !!! | TAGAGGTTTTGAGATGGTGT+CGG | + | chr3.3:61884311-61884330 | MS.gene008045:intron | 40.0% |
| AAAGCCTCACGAACATTCTC+AGG | - | chr3.3:61886370-61886389 | None:intergenic | 45.0% | |
| AAGACCAGACTACCTGGAAT+CGG | - | chr3.3:61883996-61884015 | None:intergenic | 45.0% | |
| AATATGTGAGTCTAGGAGGG+AGG | + | chr3.3:61884544-61884563 | MS.gene008045:intron | 45.0% | |
| ACAATGCAGCTTCATGGATC+TGG | + | chr3.3:61886013-61886032 | MS.gene008045:intron | 45.0% | |
| ACCAGAACCCAATCAACTAG+AGG | - | chr3.3:61886145-61886164 | None:intergenic | 45.0% | |
| ACGAGAATTTCTATGGGGAG+TGG | + | chr3.3:61884665-61884684 | MS.gene008045:intron | 45.0% | |
| ACTAGAGGACACTCTTCATC+AGG | - | chr3.3:61886130-61886149 | None:intergenic | 45.0% | |
| AGCTAAAGATGCTGCTATGG+CGG | + | chr3.3:61885725-61885744 | MS.gene008045:CDS | 45.0% | |
| ATCCGAAGAAGATGGGTACT+TGG | + | chr3.3:61884472-61884491 | MS.gene008045:intron | 45.0% | |
| ATGGAAACAGTGAGAGGTTC+TGG | + | chr3.3:61883439-61883458 | MS.gene008045:intron | 45.0% | |
| ATTTCTATGGGGAGTGGTGA+AGG | + | chr3.3:61884671-61884690 | MS.gene008045:intron | 45.0% | |
| CAATCCTGAGAATGTTCGTG+AGG | + | chr3.3:61886363-61886382 | MS.gene008045:CDS | 45.0% | |
| GAGTATCATCGGCGTATTGA+AGG | - | chr3.3:61884239-61884258 | None:intergenic | 45.0% | |
| GCTTTGTCTAGTCTCAAACC+TGG | + | chr3.3:61886385-61886404 | MS.gene008045:CDS | 45.0% | |
| GGTTTAATACGGAGGTTGTG+CGG | + | chr3.3:61884976-61884995 | MS.gene008045:intron | 45.0% | |
| GTGAAGCCAATTTGTCACCA+TGG | - | chr3.3:61883574-61883593 | None:intergenic | 45.0% | |
| GTGGTTGGATGTGGTAACTT+TGG | + | chr3.3:61884932-61884951 | MS.gene008045:intron | 45.0% | |
| GTTCTCCATGCAAATGCTGA+TGG | + | chr3.3:61886085-61886104 | MS.gene008045:CDS | 45.0% | |
| GTTTGGACAATGCAGCTTCA+TGG | + | chr3.3:61886007-61886026 | MS.gene008045:intron | 45.0% | |
| TCAGACCCTCAACTCAATAG+AGG | - | chr3.3:61883639-61883658 | None:intergenic | 45.0% | |
| TCCACTCGTAAAAGAGGCAA+GGG | - | chr3.3:61885273-61885292 | None:intergenic | 45.0% | |
| TCCCAAGTACCCATCTTCTT+CGG | - | chr3.3:61884477-61884496 | None:intergenic | 45.0% | |
| TCCGAAGAAGATGGGTACTT+GGG | + | chr3.3:61884473-61884492 | MS.gene008045:intron | 45.0% | |
| TCCTCTAGTTGATTGGGTTC+TGG | + | chr3.3:61886141-61886160 | MS.gene008045:CDS | 45.0% | |
| TCCTTCCAAAGTGAATGCTC+CGG | - | chr3.3:61884828-61884847 | None:intergenic | 45.0% | |
| TGCATCAGATGGCATTCAGA+AGG | + | chr3.3:61886435-61886454 | MS.gene008045:CDS | 45.0% | |
| TGCCAACTCAGTATGTTTGC+AGG | - | chr3.3:61885637-61885656 | None:intergenic | 45.0% | |
| TGGGAAATGGGATGAATACC+CGG | + | chr3.3:61885003-61885022 | MS.gene008045:intron | 45.0% | |
| TTCCACTCGTAAAAGAGGCA+AGG | - | chr3.3:61885274-61885293 | None:intergenic | 45.0% | |
| TTGTCTAGTCTCAAACCTGG+AGG | + | chr3.3:61886388-61886407 | MS.gene008045:CDS | 45.0% | |
| TTTCCTCTCATCCCTTCATG+AGG | - | chr3.3:61884186-61884205 | None:intergenic | 45.0% | |
| TTTCTATGGGGAGTGGTGAA+GGG | + | chr3.3:61884672-61884691 | MS.gene008045:intron | 45.0% | |
| ! | AAATATGGTTGGCTCTTGGC+AGG | + | chr3.3:61886334-61886353 | MS.gene008045:CDS | 45.0% |
| ! | ACAAGGAGTACAAATTGGGG+AGG | - | chr3.3:61885454-61885473 | None:intergenic | 45.0% |
| ! | AGAGCCTGTTGGAGTATTTG+TGG | + | chr3.3:61885857-61885876 | MS.gene008045:CDS | 45.0% |
| ! | ATGGGATGAATACCCGGTTT+TGG | + | chr3.3:61885009-61885028 | MS.gene008045:intron | 45.0% |
| ! | CAAGGAGTACAAATTGGGGA+GGG | - | chr3.3:61885453-61885472 | None:intergenic | 45.0% |
| ! | CAGTGGTGAAGCATTCGATT+GGG | + | chr3.3:61886282-61886301 | MS.gene008045:intron | 45.0% |
| ! | CGCTTTAGTGGGTGATCTTT+CGG | + | chr3.3:61885106-61885125 | MS.gene008045:intron | 45.0% |
| ! | CGGTCTTTTGTGGAAGTTTG+TGG | - | chr3.3:61883976-61883995 | None:intergenic | 45.0% |
| ! | CTTCAGCCTCTATTGAGTTG+AGG | + | chr3.3:61883630-61883649 | MS.gene008045:intron | 45.0% |
| ! | GCCTCTTTTACGAGTGGAAT+TGG | + | chr3.3:61885275-61885294 | MS.gene008045:CDS | 45.0% |
| ! | GGGAGGAAAGAAGGTTTGTT+AGG | + | chr3.3:61884692-61884711 | MS.gene008045:intron | 45.0% |
| ! | GGTTCTGGTAGATAGTGCAA+AGG | + | chr3.3:61886156-61886175 | MS.gene008045:CDS | 45.0% |
| ! | TACAACCGGAGCATTCACTT+TGG | + | chr3.3:61884820-61884839 | MS.gene008045:intron | 45.0% |
| ! | TACCTGGAATCGGTCTTTTG+TGG | - | chr3.3:61883986-61884005 | None:intergenic | 45.0% |
| ! | TGGAACTCCCTTACCTCTTT+TGG | + | chr3.3:61885295-61885314 | MS.gene008045:CDS | 45.0% |
| ! | TGTGGTAACTTTGGAAGGAG+TGG | + | chr3.3:61884941-61884960 | MS.gene008045:intron | 45.0% |
| ! | TTCCACAAAAGACCGATTCC+AGG | + | chr3.3:61883981-61884000 | MS.gene008045:CDS | 45.0% |
| ! | TTTAGTGGGTGATCTTTCGG+AGG | + | chr3.3:61885109-61885128 | MS.gene008045:intron | 45.0% |
| !! | ACTCTAAAGGCGTTGCTTAG+AGG | + | chr3.3:61884294-61884313 | MS.gene008045:intron | 45.0% |
| !! | CACCCACTAAAGCGTCTTTT+TGG | - | chr3.3:61885100-61885119 | None:intergenic | 45.0% |
| !! | TAAGCATCAATACGGGTTGG+TGG | + | chr3.3:61884206-61884225 | MS.gene008045:intron | 45.0% |
| !!! | AGAGGTTTTGAGATGGTGTC+GGG | + | chr3.3:61884312-61884331 | MS.gene008045:intron | 45.0% |
| !!! | CCCGGTTTTGGTTAGATCAT+TGG | + | chr3.3:61885021-61885040 | MS.gene008045:intron | 45.0% |
| AAGCCTCATGAAGGGATGAG+AGG | + | chr3.3:61884180-61884199 | MS.gene008045:intron | 50.0% | |
| ACTGCTTCTGTCATGACAGC+AGG | + | chr3.3:61885349-61885368 | MS.gene008045:intron | 50.0% | |
| AGCGGCATATGTGCATCAGA+TGG | + | chr3.3:61886424-61886443 | MS.gene008045:CDS | 50.0% | |
| AGTGGTGAAGGGAGGAAAGA+AGG | + | chr3.3:61884683-61884702 | MS.gene008045:intron | 50.0% | |
| ATGTGAGTCGTTTGGCGAAG+TGG | + | chr3.3:61884784-61884803 | MS.gene008045:intron | 50.0% | |
| ATTCCAAGTGCCTCCTCCTA+CGG | - | chr3.3:61885138-61885157 | None:intergenic | 50.0% | |
| CACTCGTAAAAGAGGCAAGG+GGG | - | chr3.3:61885271-61885290 | None:intergenic | 50.0% | |
| CCACTCGTAAAAGAGGCAAG+GGG | - | chr3.3:61885272-61885291 | None:intergenic | 50.0% | |
| CGTGTGGGAAGAGAGTTTAG+TGG | + | chr3.3:61885181-61885200 | MS.gene008045:intron | 50.0% | |
| CTCCCAAACCTCCTAAAGAC+CGG | - | chr3.3:61884743-61884762 | None:intergenic | 50.0% | |
| CTGCTTCTGTCATGACAGCA+GGG | + | chr3.3:61885350-61885369 | MS.gene008045:intron | 50.0% | |
| CTGGTAGATAGTGCAAAGGG+TGG | + | chr3.3:61886160-61886179 | MS.gene008045:CDS | 50.0% | |
| GAGGCGAAAACTGTTCGTGT+GGG | + | chr3.3:61885166-61885185 | MS.gene008045:intron | 50.0% | |
| GAGGTGGAGGCTAATACAAC+CGG | + | chr3.3:61884806-61884825 | MS.gene008045:intron | 50.0% | |
| GGAGCGAATCCGAAGAAGAT+GGG | + | chr3.3:61884465-61884484 | MS.gene008045:intron | 50.0% | |
| GGGAGTTAGAGATGTTAGGG+TGG | + | chr3.3:61884758-61884777 | MS.gene008045:intron | 50.0% | |
| GGTGGTGAATGTGAGTCGTT+TGG | + | chr3.3:61884776-61884795 | MS.gene008045:intron | 50.0% | |
| TAATACGGAGGTTGTGCGGA+AGG | + | chr3.3:61884980-61884999 | MS.gene008045:intron | 50.0% | |
| TAGATAGTGCAAAGGGTGGC+AGG | + | chr3.3:61886164-61886183 | MS.gene008045:CDS | 50.0% | |
| TAGTCTCAAACCTGGAGGAG+TGG | + | chr3.3:61886393-61886412 | MS.gene008045:CDS | 50.0% | |
| TATGGGGGATTTAGAGGGGT+GGG | + | chr3.3:61885211-61885230 | MS.gene008045:intron | 50.0% | |
| TCCCAAACCTCCTAAAGACC+GGG | - | chr3.3:61884742-61884761 | None:intergenic | 50.0% | |
| TGGAAGGGAGTTCATGGAGA+TGG | + | chr3.3:61884380-61884399 | MS.gene008045:intron | 50.0% | |
| TGTAAATACGGGAGCCGGAT+TGG | + | chr3.3:61884858-61884877 | MS.gene008045:intron | 50.0% | |
| TTATGGGGGATTTAGAGGGG+TGG | + | chr3.3:61885210-61885229 | MS.gene008045:intron | 50.0% | |
| TTGTGCGGAAGGTGGGAAAT+GGG | + | chr3.3:61884991-61885010 | MS.gene008045:intron | 50.0% | |
| TTTAGAGGGGTGGGTGTGTT+CGG | + | chr3.3:61885220-61885239 | MS.gene008045:intron | 50.0% | |
| ! | AAGACCGATTCCAGGTAGTC+TGG | + | chr3.3:61883989-61884008 | MS.gene008045:intron | 50.0% |
| ! | AAGTATTTGGGGCTACCGGT+GGG | + | chr3.3:61884444-61884463 | MS.gene008045:intron | 50.0% |
| ! | ACCGGAGCATTCACTTTGGA+AGG | + | chr3.3:61884824-61884843 | MS.gene008045:intron | 50.0% |
| ! | AGCTTCATGGATCTGGTTCG+CGG | + | chr3.3:61886020-61886039 | MS.gene008045:intron | 50.0% |
| ! | GCAGTGGTGAAGCATTCGAT+TGG | + | chr3.3:61886281-61886300 | MS.gene008045:intron | 50.0% |
| ! | GGTAACTTTGGAAGGAGTGG+CGG | + | chr3.3:61884944-61884963 | MS.gene008045:intron | 50.0% |
| ! | GTAACTTTGGAAGGAGTGGC+GGG | + | chr3.3:61884945-61884964 | MS.gene008045:intron | 50.0% |
| ! | TAAGTATTTGGGGCTACCGG+TGG | + | chr3.3:61884443-61884462 | MS.gene008045:intron | 50.0% |
| ! | TGAGATGGTGTCGGGTTTGA+AGG | + | chr3.3:61884320-61884339 | MS.gene008045:intron | 50.0% |
| !! | GTTCGGATATGGTGGATTCG+TGG | + | chr3.3:61885237-61885256 | MS.gene008045:CDS | 50.0% |
| !! | TTTTGCTTCGAGGTGGTGGT+TGG | + | chr3.3:61884917-61884936 | MS.gene008045:intron | 50.0% |
| CACCACCTCGAAGCAAAAGC+TGG | - | chr3.3:61884915-61884934 | None:intergenic | 55.0% | |
| CCCAAACCTCCTAAAGACCG+GGG | - | chr3.3:61884741-61884760 | None:intergenic | 55.0% | |
| CTACTGACATCCACTCCTCC+AGG | - | chr3.3:61886406-61886425 | None:intergenic | 55.0% | |
| GATCTTTCGGAGGCAACCGT+AGG | + | chr3.3:61885119-61885138 | MS.gene008045:intron | 55.0% | |
| GATTGTGGAGCAGAGCCTGT+TGG | + | chr3.3:61885846-61885865 | MS.gene008045:CDS | 55.0% | |
| GGAGGAGTGGATGTCAGTAG+CGG | + | chr3.3:61886406-61886425 | MS.gene008045:CDS | 55.0% | |
| GGAGGCGAAAACTGTTCGTG+TGG | + | chr3.3:61885165-61885184 | MS.gene008045:intron | 55.0% | |
| GGCTCCCATCAGCATTTGCA+TGG | - | chr3.3:61886093-61886112 | None:intergenic | 55.0% | |
| GGGAGCGAATCCGAAGAAGA+TGG | + | chr3.3:61884464-61884483 | MS.gene008045:intron | 55.0% | |
| GTGGGTGTGTTCGGATATGG+TGG | + | chr3.3:61885229-61885248 | MS.gene008045:CDS | 55.0% | |
| GTGTGTCAACCCCGGTCTTT+AGG | + | chr3.3:61884729-61884748 | MS.gene008045:intron | 55.0% | |
| GTTGTGCGGAAGGTGGGAAA+TGG | + | chr3.3:61884990-61885009 | MS.gene008045:intron | 55.0% | |
| TGAGTCGTTTGGCGAAGTGG+AGG | + | chr3.3:61884787-61884806 | MS.gene008045:intron | 55.0% | |
| TGTCAACCCCGGTCTTTAGG+AGG | + | chr3.3:61884732-61884751 | MS.gene008045:intron | 55.0% | |
| TGTGAGTCTAGGAGGGAGGA+TGG | + | chr3.3:61884548-61884567 | MS.gene008045:intron | 55.0% | |
| TTCTTCGGATTCGCTCCCAC+CGG | - | chr3.3:61884462-61884481 | None:intergenic | 55.0% | |
| ! | ACCCCGGTCTTTAGGAGGTT+TGG | + | chr3.3:61884737-61884756 | MS.gene008045:intron | 55.0% |
| ! | ATGGTTGGCTCTTGGCAGGA+GGG | + | chr3.3:61886338-61886357 | MS.gene008045:CDS | 55.0% |
| ! | CAGCTTTTGCTTCGAGGTGG+TGG | + | chr3.3:61884913-61884932 | MS.gene008045:intron | 55.0% |
| ! | CCCCGGTCTTTAGGAGGTTT+GGG | + | chr3.3:61884738-61884757 | MS.gene008045:intron | 55.0% |
| ! | CCCCTTGCCTCTTTTACGAG+TGG | + | chr3.3:61885269-61885288 | MS.gene008045:CDS | 55.0% |
| ! | GCTTCATGGATCTGGTTCGC+GGG | + | chr3.3:61886021-61886040 | MS.gene008045:intron | 55.0% |
| ! | TATGGTTGGCTCTTGGCAGG+AGG | + | chr3.3:61886337-61886356 | MS.gene008045:CDS | 55.0% |
| ! | TGTGGCCAGCTTTTGCTTCG+AGG | + | chr3.3:61884907-61884926 | MS.gene008045:intron | 55.0% |
| ! | TTCGAGGTGGTGGTTGGATG+TGG | + | chr3.3:61884923-61884942 | MS.gene008045:intron | 55.0% |
| ACGGAGGTTGTGCGGAAGGT+GGG | + | chr3.3:61884984-61885003 | MS.gene008045:intron | 60.0% | |
| CTATGGGGAGTGGTGAAGGG+AGG | + | chr3.3:61884675-61884694 | MS.gene008045:intron | 60.0% | |
| CTTTCGGAGGCAACCGTAGG+AGG | + | chr3.3:61885122-61885141 | MS.gene008045:intron | 60.0% | |
| GGAAGACGGTGTGTCAACCC+CGG | + | chr3.3:61884721-61884740 | MS.gene008045:intron | 60.0% | |
| GGGGTGGGTGTGTTCGGATA+TGG | + | chr3.3:61885226-61885245 | MS.gene008045:CDS | 60.0% | |
| GTCGTTTGGCGAAGTGGAGG+TGG | + | chr3.3:61884790-61884809 | MS.gene008045:intron | 60.0% | |
| GTTTGGCGAAGTGGAGGTGG+AGG | + | chr3.3:61884793-61884812 | MS.gene008045:intron | 60.0% | |
| TACGGAGGTTGTGCGGAAGG+TGG | + | chr3.3:61884983-61885002 | MS.gene008045:intron | 60.0% | |
| ! | GGCCAGCTTTTGCTTCGAGG+TGG | + | chr3.3:61884910-61884929 | MS.gene008045:intron | 60.0% |
| !! | AAGGAGTGGCGGGTGCGAAT+TGG | + | chr3.3:61884955-61884974 | MS.gene008045:intron | 60.0% |
| !! | CAACCGTAGGAGGAGGCACT+TGG | + | chr3.3:61885132-61885151 | MS.gene008045:intron | 60.0% |
| TCGGAGGCAACCGTAGGAGG+AGG | + | chr3.3:61885125-61885144 | MS.gene008045:intron | 65.0% | |
| GCTGCTATGGCGGCCGAAGC+TGG | + | chr3.3:61885735-61885754 | MS.gene008045:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.3 | gene | 61883439 | 61886510 | 61883439 | ID=MS.gene008045 |
| chr3.3 | mRNA | 61883439 | 61886510 | 61883439 | ID=MS.gene008045.t1;Parent=MS.gene008045 |
| chr3.3 | exon | 61883439 | 61883447 | 61883439 | ID=MS.gene008045.t1.exon1;Parent=MS.gene008045.t1 |
| chr3.3 | CDS | 61883439 | 61883447 | 61883439 | ID=cds.MS.gene008045.t1;Parent=MS.gene008045.t1 |
| chr3.3 | exon | 61883940 | 61884002 | 61883940 | ID=MS.gene008045.t1.exon2;Parent=MS.gene008045.t1 |
| chr3.3 | CDS | 61883940 | 61884002 | 61883940 | ID=cds.MS.gene008045.t1;Parent=MS.gene008045.t1 |
| chr3.3 | exon | 61885225 | 61885346 | 61885225 | ID=MS.gene008045.t1.exon3;Parent=MS.gene008045.t1 |
| chr3.3 | CDS | 61885225 | 61885346 | 61885225 | ID=cds.MS.gene008045.t1;Parent=MS.gene008045.t1 |
| chr3.3 | exon | 61885424 | 61885485 | 61885424 | ID=MS.gene008045.t1.exon4;Parent=MS.gene008045.t1 |
| chr3.3 | CDS | 61885424 | 61885485 | 61885424 | ID=cds.MS.gene008045.t1;Parent=MS.gene008045.t1 |
| chr3.3 | exon | 61885574 | 61885938 | 61885574 | ID=MS.gene008045.t1.exon5;Parent=MS.gene008045.t1 |
| chr3.3 | CDS | 61885574 | 61885938 | 61885574 | ID=cds.MS.gene008045.t1;Parent=MS.gene008045.t1 |
| chr3.3 | exon | 61886022 | 61886185 | 61886022 | ID=MS.gene008045.t1.exon6;Parent=MS.gene008045.t1 |
| chr3.3 | CDS | 61886022 | 61886185 | 61886022 | ID=cds.MS.gene008045.t1;Parent=MS.gene008045.t1 |
| chr3.3 | exon | 61886285 | 61886510 | 61886285 | ID=MS.gene008045.t1.exon7;Parent=MS.gene008045.t1 |
| chr3.3 | CDS | 61886285 | 61886510 | 61886285 | ID=cds.MS.gene008045.t1;Parent=MS.gene008045.t1 |
| Gene Sequence |
| Protein sequence |
