AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene82040

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene82040.t1 MTR_3g070890 96.016 251 10 0 118 368 25 275 4.08e-165 462
MS.gene82040.t1 MTR_3g449480 96.016 251 10 0 118 368 55 305 2.48e-164 462
MS.gene82040.t1 MTR_3g449480 96.016 251 10 0 118 368 25 275 3.77e-164 460
MS.gene82040.t1 MTR_3g449480 96.016 251 10 0 118 368 25 275 3.77e-164 460
MS.gene82040.t1 MTR_3g449480 96.016 251 10 0 118 368 39 289 4.45e-164 460
MS.gene82040.t1 MTR_3g449480 96.016 251 10 0 118 368 94 344 1.58e-162 459
MS.gene82040.t1 MTR_3g449480 98.485 66 1 0 163 228 1 66 2.80e-25 105
MS.gene82040.t1 MTR_3g449480 96.016 251 10 0 118 368 193 443 5.81e-162 461
MS.gene82040.t1 MTR_3g449480 95.495 111 5 0 118 228 55 165 1.18e-54 186
MS.gene82040.t1 MTR_3g449480 96.016 251 10 0 118 368 163 413 6.72e-162 460
MS.gene82040.t1 MTR_3g449480 95.495 111 5 0 118 228 25 135 8.58e-55 186
MS.gene82040.t1 MTR_3g070890 97.087 206 6 0 163 368 1 206 5.37e-144 406
MS.gene82040.t1 MTR_3g449480 97.087 206 6 0 163 368 1 206 5.97e-143 404
MS.gene82040.t1 MTR_3g449480 96.023 176 7 0 118 293 39 214 3.91e-107 313
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene82040.t1 AT1G07780 64.143 251 90 0 118 368 25 275 2.52e-116 339
MS.gene82040.t1 AT1G07780 64.143 251 90 0 118 368 25 275 2.52e-116 339
MS.gene82040.t1 AT1G07780 64.143 251 90 0 118 368 25 275 2.52e-116 339
MS.gene82040.t1 AT1G07780 64.143 251 90 0 118 368 25 275 2.52e-116 339
MS.gene82040.t1 AT1G07780 64.143 251 90 0 118 368 25 275 2.52e-116 339
MS.gene82040.t1 AT1G07780 64.143 251 90 0 118 368 25 275 2.52e-116 339
MS.gene82040.t1 AT1G07780 64.143 251 90 0 118 368 25 275 2.52e-116 339
MS.gene82040.t1 AT1G07780 64.143 251 90 0 118 368 25 275 2.52e-116 339
MS.gene82040.t1 AT5G05590 64.143 251 90 0 118 368 25 275 2.76e-116 339
MS.gene82040.t1 AT1G07780 71.845 206 58 0 163 368 1 206 5.17e-108 315
MS.gene82040.t1 AT1G07780 61.932 176 67 0 118 293 25 200 9.85e-74 228
MS.gene82040.t1 AT1G07780 61.932 176 67 0 118 293 25 200 9.85e-74 228
MS.gene82040.t1 AT5G05590 61.932 176 67 0 118 293 25 200 1.32e-73 228
MS.gene82040.t1 AT1G07780 61.932 176 67 0 118 293 25 200 1.42e-73 228
MS.gene82040.t1 AT1G07780 61.932 176 67 0 118 293 25 200 1.42e-73 228
MS.gene82040.t1 AT5G05590 61.932 176 67 0 118 293 25 200 1.71e-73 228
MS.gene82040.t1 AT1G29410 60.795 176 69 0 118 293 4 179 1.11e-71 222
MS.gene82040.t1 AT1G29410 59.016 183 75 0 111 293 18 200 1.29e-71 223
MS.gene82040.t1 AT1G29410 59.016 183 75 0 111 293 18 200 1.29e-71 223
MS.gene82040.t1 AT1G29410 60.795 176 69 0 118 293 4 179 1.96e-71 223
MS.gene82040.t1 AT1G29410 60.795 176 69 0 118 293 4 179 1.96e-71 223
MS.gene82040.t1 AT1G29410 60.795 176 69 0 118 293 25 200 3.72e-71 223
MS.gene82040.t1 AT1G29410 60.795 176 69 0 118 293 25 200 3.72e-71 223
MS.gene82040.t1 AT5G05590 48.899 227 84 2 118 312 25 251 1.08e-67 214

Find 91 sgRNAs with CRISPR-Local

Find 292 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAAATTGGCTTCACTGAATT+TGG 0.096000 3.2:+64497904 MS.gene82040:CDS
CATCAGGAATTGTGTTTAAA+AGG 0.165069 3.2:-64500469 None:intergenic
ATCATACAAGGAGTACAAAT+TGG 0.210922 3.2:-64499813 None:intergenic
TTGTACTCCTTGTATGATTT+TGG 0.233780 3.2:+64499818 MS.gene82040:CDS
GAAGCTGGAGCAAACTTTAT+TGG 0.237005 3.2:+64500108 MS.gene82040:CDS
TCCTCTAGTTGATTGGGTTC+TGG 0.309444 3.2:+64500499 MS.gene82040:CDS
TGATTTCCATGGTGACAAAT+TGG 0.325304 3.2:+64497889 MS.gene82040:CDS
GCTGCTATGGCGGCAGAAGC+TGG 0.329600 3.2:+64500093 MS.gene82040:CDS
AGCTTTCCCATCTTTGATTC+AGG 0.337440 3.2:+64500403 MS.gene82040:CDS
ACTTGAAATGATTAAGCCTT+TGG 0.345666 3.2:+64500038 MS.gene82040:CDS
GGGGTGGGTGTGTTCGGATA+TGG 0.356830 3.2:+64499550 MS.gene82040:CDS
TTTAGAGGGGTGGGTGTGTT+CGG 0.357031 3.2:+64499544 MS.gene82040:intron
TTTAGGGTCACTGGTATATC+AGG 0.359938 3.2:+64499759 MS.gene82040:intron
GTTTGGACAATGCAGCTTCA+TGG 0.372122 3.2:+64500365 MS.gene82040:intron
TTCAGCCTCTATTGAGTTGA+GGG 0.374285 3.2:+64497955 MS.gene82040:CDS
ATCAAGAATAGCTTCCTTCA+TGG 0.376096 3.2:+64500820 MS.gene82040:CDS
ATATGGTGGATTCGTGGAAT+TGG 0.378729 3.2:+64499567 MS.gene82040:CDS
AGAGTGTCTGTTAAGATAGC+TGG 0.378785 3.2:+64499630 MS.gene82040:CDS
AAAAGTGTCCTCTAGTTGAT+TGG 0.384087 3.2:+64500492 MS.gene82040:CDS
TCATACAAGGAGTACAAATT+GGG 0.388498 3.2:-64499812 None:intergenic
TTCAACAACTGGGAGTTACT+TGG 0.396508 3.2:+64498265 MS.gene82040:CDS
CTATCTTAACAGACACTCTC+AGG 0.403921 3.2:-64499626 None:intergenic
TTGCAAGAAACTTCATACTT+TGG 0.418663 3.2:-64499976 None:intergenic
ACAATGCAGCTTCATGGATC+TGG 0.426005 3.2:+64500371 MS.gene82040:intron
CAGTGGTGAAGCATTCGATT+GGG 0.429512 3.2:+64500640 MS.gene82040:intron
ATAATTTCTGTAGGTTTGAA+AGG 0.437678 3.2:+64499919 MS.gene82040:intron
AGCTTCATGGATCTGGTTCG+CGG 0.464460 3.2:+64500378 MS.gene82040:intron
TCATCCACAAATACTCCAAC+AGG 0.465466 3.2:-64500219 None:intergenic
TTCCACAAAAGACCGATTCC+AGG 0.472417 3.2:+64498305 MS.gene82040:CDS
AAGCAAATATGGTTGGCTCT+TGG 0.483948 3.2:+64500688 MS.gene82040:CDS
AAAGTGTCCTCTAGTTGATT+GGG 0.489124 3.2:+64500493 MS.gene82040:CDS
GTGGGTGTGTTCGGATATGG+TGG 0.493398 3.2:+64499553 MS.gene82040:CDS
AAATATGGTTGGCTCTTGGC+AGG 0.497385 3.2:+64500692 MS.gene82040:CDS
TGTTTCACTTTCTGTTGCAA+AGG 0.498388 3.2:+64500161 MS.gene82040:CDS
TTTGGACAAGAATGAGATTG+AGG 0.499147 3.2:+64497922 MS.gene82040:CDS
TCCAATTCCACTCGTAAAAG+AGG 0.500369 3.2:-64499600 None:intergenic
AAAGCCTCACGAACATTCTC+AGG 0.505756 3.2:-64500725 None:intergenic
TCAAAAGTTGCAAGAGATTG+TGG 0.507409 3.2:+64500189 MS.gene82040:CDS
TAGATAGTGCAAAGGGTGGC+AGG 0.516369 3.2:+64500522 MS.gene82040:CDS
GAGTGTCTGTTAAGATAGCT+GGG 0.517565 3.2:+64499631 MS.gene82040:CDS
AGAGCCTGTTGGAGTATTTG+TGG 0.521575 3.2:+64500215 MS.gene82040:CDS
ATCAAATCTTGAGTTTGTGC+AGG 0.523243 3.2:+64500275 MS.gene82040:CDS
GCAGTGGTGAAGCATTCGAT+TGG 0.523251 3.2:+64500639 MS.gene82040:intron
TTCTTGCAAACATACTGAGT+TGG 0.523300 3.2:+64499990 MS.gene82040:CDS
AAATGTTTCATGTTCATCAA+AGG 0.525170 3.2:+64500014 MS.gene82040:CDS
ATCAGCTAAAGATGCTGCTA+TGG 0.526392 3.2:+64500080 MS.gene82040:CDS
TCAGACCCTCAACTCAATAG+AGG 0.527805 3.2:-64497960 None:intergenic
GCTTCATGGATCTGGTTCGC+GGG 0.535795 3.2:+64500379 MS.gene82040:intron
AAGACCAGACTACCTGGAAT+CGG 0.536235 3.2:-64498317 None:intergenic
TCCACTCGTAAAAGAGGCAA+GGG 0.536949 3.2:-64499594 None:intergenic
CTTCAGCCTCTATTGAGTTG+AGG 0.539160 3.2:+64497954 MS.gene82040:CDS
AGAGACAAAACAAATACAAA+GGG 0.540690 3.2:-64499782 None:intergenic
AAGCCTTTGGTTAAGATGTG+TGG 0.545538 3.2:+64500051 MS.gene82040:CDS
GGCTCCCATCAGCATTTGCA+TGG 0.555209 3.2:-64500448 None:intergenic
CTACTGACATCCACTCCTCC+AGG 0.559568 3.2:-64500761 None:intergenic
GTTCTCCATGCAAATGCTGA+TGG 0.559769 3.2:+64500443 MS.gene82040:CDS
AAATTAGAAGCAAATATGGT+TGG 0.569037 3.2:+64500681 MS.gene82040:CDS
TTCCACTCGTAAAAGAGGCA+AGG 0.570721 3.2:-64499595 None:intergenic
GCTTTGTCTAGTTTCAAACC+TGG 0.571403 3.2:+64500743 MS.gene82040:CDS
AGCTAAAGATGCTGCTATGG+CGG 0.574498 3.2:+64500083 MS.gene82040:CDS
TAGTTTCAAACCTGGAGGAG+TGG 0.576662 3.2:+64500751 MS.gene82040:CDS
AAGCTAATGCTTGATTTCCA+TGG 0.577394 3.2:+64497878 None:intergenic
TTTGTGCAGGTTCAACAACT+GGG 0.577919 3.2:+64498255 MS.gene82040:intron
AAGAGACAAAACAAATACAA+AGG 0.580070 3.2:-64499783 None:intergenic
GATTGTGGAGCAGAGCCTGT+TGG 0.580954 3.2:+64500204 MS.gene82040:CDS
GTTCGGATATGGTGGATTCG+TGG 0.582221 3.2:+64499561 MS.gene82040:CDS
ATGGTTGGCTCTTGGCAGGA+GGG 0.589722 3.2:+64500696 MS.gene82040:CDS
TATCTTAACAGACACTCTCA+GGG 0.594360 3.2:-64499625 None:intergenic
GTGAAGCCAATTTGTCACCA+TGG 0.595385 3.2:-64497895 None:intergenic
AGAATGTACTGCATCCATGA+AGG 0.601091 3.2:-64500834 None:intergenic
TGCATCAGATGGCATTCAGA+AGG 0.604378 3.2:+64500793 MS.gene82040:CDS
TATGGTTGGCTCTTGGCAGG+AGG 0.607292 3.2:+64500695 MS.gene82040:CDS
TTCTCCATGCAAATGCTGAT+GGG 0.608881 3.2:+64500444 MS.gene82040:CDS
GTTCTGGTAGATAGTGCAAA+GGG 0.610316 3.2:+64500515 MS.gene82040:CDS
AGCGGCATATGTGCATCAGA+TGG 0.611930 3.2:+64500782 MS.gene82040:CDS
TTGTCTAGTTTCAAACCTGG+AGG 0.627471 3.2:+64500746 MS.gene82040:CDS
GGTTCTGGTAGATAGTGCAA+AGG 0.632272 3.2:+64500514 MS.gene82040:CDS
CAAGGAGTACAAATTGGGGA+GGG 0.634974 3.2:-64499807 None:intergenic
ACTTTATTGGAATGATCGTG+TGG 0.636931 3.2:+64500121 MS.gene82040:CDS
ACAAGGAGTACAAATTGGGG+AGG 0.638971 3.2:-64499808 None:intergenic
ATGCCACACATCTTAACCAA+AGG 0.642355 3.2:-64500054 None:intergenic
TTAACCACCAAAATCATACA+AGG 0.643616 3.2:-64499825 None:intergenic
ACCAGAACCCAATCAACTAG+AGG 0.654201 3.2:-64500500 None:intergenic
CATACAAGGAGTACAAATTG+GGG 0.657722 3.2:-64499811 None:intergenic
CAATCCTGAGAATGTTCGTG+AGG 0.659098 3.2:+64500721 MS.gene82040:CDS
CCACTCGTAAAAGAGGCAAG+GGG 0.668551 3.2:-64499593 None:intergenic
GGAGGAGTGGATGTCAGTAG+CGG 0.679932 3.2:+64500764 MS.gene82040:CDS
CACTCGTAAAAGAGGCAAGG+GGG 0.687217 3.2:-64499592 None:intergenic
CTGGTAGATAGTGCAAAGGG+TGG 0.687302 3.2:+64500518 MS.gene82040:CDS
AGTGTCTGTTAAGATAGCTG+GGG 0.723904 3.2:+64499632 MS.gene82040:CDS
ATCTTAACAGACACTCTCAG+GGG 0.731126 3.2:-64499624 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ACTAAAAAAAAAAGATTGTT+TGG - chr3.2:64500586-64500605 None:intergenic 15.0%
!! GATTTAAATATAATTTCTGT+AGG + chr3.2:64499910-64499929 MS.gene82040:intron 15.0%
!!! AATTTTTGGTAATTTAAACT+GGG - chr3.2:64500666-64500685 None:intergenic 15.0%
!!! TAATTTTTGGTAATTTAAAC+TGG - chr3.2:64500667-64500686 None:intergenic 15.0%
!! AATTTCTAACTAATTCTTCT+AGG + chr3.2:64498090-64498109 MS.gene82040:intron 20.0%
!! CATTTAATAAAAAACCAATC+CGG - chr3.2:64499199-64499218 None:intergenic 20.0%
!! TCTATAAAAGTTGTTTGATT+GGG + chr3.2:64498673-64498692 MS.gene82040:intron 20.0%
!! TTCTATAAAAGTTGTTTGAT+TGG + chr3.2:64498672-64498691 MS.gene82040:intron 20.0%
!! TTCTTTAAACTTTCAATCAA+AGG - chr3.2:64498825-64498844 None:intergenic 20.0%
!!! AAGTTCTTTTTTGTAAATAC+GGG + chr3.2:64499171-64499190 MS.gene82040:intron 20.0%
!!! GAAGTTCTTTTTTGTAAATA+CGG + chr3.2:64499170-64499189 MS.gene82040:intron 20.0%
! AAAAAAGAGAGGTAGAAAAT+AGG - chr3.2:64498927-64498946 None:intergenic 25.0%
! AAAACAAATTTCGAAGTACA+AGG + chr3.2:64499875-64499894 MS.gene82040:intron 25.0%
! AAATGTTTCATGTTCATCAA+AGG + chr3.2:64500014-64500033 MS.gene82040:CDS 25.0%
! AAATTAGAAGCAAATATGGT+TGG + chr3.2:64500681-64500700 MS.gene82040:CDS 25.0%
! AACTTTATGAATTGTAGAGA+GGG + chr3.2:64498732-64498751 MS.gene82040:intron 25.0%
! AAGAGACAAAACAAATACAA+AGG - chr3.2:64499786-64499805 None:intergenic 25.0%
! AGAGACAAAACAAATACAAA+GGG - chr3.2:64499785-64499804 None:intergenic 25.0%
! ATAATTTCTGTAGGTTTGAA+AGG + chr3.2:64499919-64499938 MS.gene82040:intron 25.0%
! CCAAAAATTAGAAGCAAATA+TGG + chr3.2:64500677-64500696 MS.gene82040:CDS 25.0%
! CTATAAAAGTTGTTTGATTG+GGG + chr3.2:64498674-64498693 MS.gene82040:intron 25.0%
! TCTTGATTAGGATATCTTTA+TGG - chr3.2:64497996-64498015 None:intergenic 25.0%
!! AGAGATTAGTTAATGCATTT+AGG - chr3.2:64498132-64498151 None:intergenic 25.0%
!! CCATATTTGCTTCTAATTTT+TGG - chr3.2:64500680-64500699 None:intergenic 25.0%
!!! CAATTTTCTAGCATAAGATT+CGG + chr3.2:64499952-64499971 MS.gene82040:CDS 25.0%
!!! TATATTGTTTGAAAGCATCA+TGG + chr3.2:64498441-64498460 MS.gene82040:intron 25.0%
AAAGAAGAAGCTAAACTCTT+GGG + chr3.2:64498839-64498858 MS.gene82040:intron 30.0%
AATAGGAATTGCATTCAACA+CGG - chr3.2:64498910-64498929 None:intergenic 30.0%
ACTTGAAATGATTAAGCCTT+TGG + chr3.2:64500038-64500057 MS.gene82040:CDS 30.0%
AGTTTAGTGGAGAATCTTAT+GGG + chr3.2:64499518-64499537 MS.gene82040:intron 30.0%
ATTCAACGAGAATTTCTATG+GGG + chr3.2:64498984-64499003 MS.gene82040:intron 30.0%
CAACTTTATGAATTGTAGAG+AGG + chr3.2:64498731-64498750 MS.gene82040:intron 30.0%
CACAAGAACAATAATGTACA+TGG - chr3.2:64498213-64498232 None:intergenic 30.0%
CATCAGGAATTGTGTTTAAA+AGG - chr3.2:64500472-64500491 None:intergenic 30.0%
GATTCAACGAGAATTTCTAT+GGG + chr3.2:64498983-64499002 MS.gene82040:intron 30.0%
TAAAGAAGAAGCTAAACTCT+TGG + chr3.2:64498838-64498857 MS.gene82040:intron 30.0%
TAAATGCGTATGCAAATTTG+TGG + chr3.2:64499213-64499232 MS.gene82040:intron 30.0%
TAGAGTCCATAAAATATCGA+CGG - chr3.2:64498604-64498623 None:intergenic 30.0%
TAGTTAATGCATTTAGGAGT+CGG - chr3.2:64498126-64498145 None:intergenic 30.0%
TGACATTGAAATCTTGAGTT+TGG + chr3.2:64500348-64500367 MS.gene82040:intron 30.0%
TGAGGCTTTCATTTAAATAG+TGG - chr3.2:64498492-64498511 None:intergenic 30.0%
TTAAATGAAAGCCTCATGAA+GGG + chr3.2:64498496-64498515 MS.gene82040:intron 30.0%
TTAACCACCAAAATCATACA+AGG - chr3.2:64499828-64499847 None:intergenic 30.0%
TTAGAAATTGAGAAGAGTCT+CGG - chr3.2:64499401-64499420 None:intergenic 30.0%
TTGCAAGAAACTTCATACTT+TGG - chr3.2:64499979-64499998 None:intergenic 30.0%
TTTAAATGAAAGCCTCATGA+AGG + chr3.2:64498495-64498514 MS.gene82040:intron 30.0%
! AAAAGAAAACCTAACTTGCA+AGG - chr3.2:64498237-64498256 None:intergenic 30.0%
! ATCATACAAGGAGTACAAAT+TGG - chr3.2:64499816-64499835 None:intergenic 30.0%
! CGATATTTTATGGACTCTAA+AGG + chr3.2:64498605-64498624 MS.gene82040:intron 30.0%
! GATTTTCCTGAATCAAAGAT+GGG - chr3.2:64500412-64500431 None:intergenic 30.0%
! TCATACAAGGAGTACAAATT+GGG - chr3.2:64499815-64499834 None:intergenic 30.0%
! TTGTACTCCTTGTATGATTT+TGG + chr3.2:64499818-64499837 MS.gene82040:CDS 30.0%
!! TTTTGGTTAGATCATTGGAT+GGG + chr3.2:64499350-64499369 MS.gene82040:intron 30.0%
AACAAATATGTGAGTCTAGG+AGG + chr3.2:64498864-64498883 MS.gene82040:intron 35.0%
AACCAAAAAGACGCTTTAGT+GGG + chr3.2:64499419-64499438 MS.gene82040:intron 35.0%
AAGAAGAAGCTAAACTCTTG+GGG + chr3.2:64498840-64498859 MS.gene82040:intron 35.0%
AATCTTATGGGGGATTTAGA+GGG + chr3.2:64499530-64499549 MS.gene82040:intron 35.0%
ACTTTATTGGAATGATCGTG+TGG + chr3.2:64500121-64500140 MS.gene82040:CDS 35.0%
AGAGAAGAAGAGAGAATTTG+TGG + chr3.2:64498013-64498032 MS.gene82040:intron 35.0%
AGAGGAAATAAGCATCAATG+CGG + chr3.2:64498522-64498541 MS.gene82040:intron 35.0%
ATCAAATCTTGAGTTTGTGC+AGG + chr3.2:64500275-64500294 MS.gene82040:CDS 35.0%
ATCAAGAATAGCTTCCTTCA+TGG + chr3.2:64500820-64500839 MS.gene82040:CDS 35.0%
CATGAAACTAAACCTACATG+AGG - chr3.2:64498413-64498432 None:intergenic 35.0%
CGTTGAACATGCATAAAAGT+CGG - chr3.2:64500312-64500331 None:intergenic 35.0%
GAGTTTAGTGGAGAATCTTA+TGG + chr3.2:64499517-64499536 MS.gene82040:intron 35.0%
GCAATGTTTACCAAGCAAAT+TGG - chr3.2:64498043-64498062 None:intergenic 35.0%
GGATTCAACGAGAATTTCTA+TGG + chr3.2:64498982-64499001 MS.gene82040:intron 35.0%
GTTGAACATGCATAAAAGTC+GGG - chr3.2:64500311-64500330 None:intergenic 35.0%
GTTTAGTGGAGAATCTTATG+GGG + chr3.2:64499519-64499538 MS.gene82040:intron 35.0%
TAAATAAAGACCAGACTACC+TGG - chr3.2:64498326-64498345 None:intergenic 35.0%
TAACCAAAAAGACGCTTTAG+TGG + chr3.2:64499418-64499437 MS.gene82040:intron 35.0%
TATCTTAACAGACACTCTCA+GGG - chr3.2:64499628-64499647 None:intergenic 35.0%
TCAAAAGTTGCAAGAGATTG+TGG + chr3.2:64500189-64500208 MS.gene82040:CDS 35.0%
TCCAATGATCTAACCAAAAC+CGG - chr3.2:64499349-64499368 None:intergenic 35.0%
TCTCGGATAAGAAACACAAA+GGG - chr3.2:64499384-64499403 None:intergenic 35.0%
TCTCTCCCGTTTAAGTATTT+GGG + chr3.2:64498756-64498775 MS.gene82040:intron 35.0%
TCTCTCTTCTTCTCTTGATT+AGG - chr3.2:64498008-64498027 None:intergenic 35.0%
TGATTTCCATGGTGACAAAT+TGG + chr3.2:64497889-64497908 MS.gene82040:CDS 35.0%
TGTTTCACTTTCTGTTGCAA+AGG + chr3.2:64500161-64500180 MS.gene82040:CDS 35.0%
TGTTTGATTGGGGTTAATGT+TGG + chr3.2:64498684-64498703 MS.gene82040:intron 35.0%
TTCAACGACAGTTAAATGCT+TGG + chr3.2:64500325-64500344 MS.gene82040:intron 35.0%
TTCTTGCAAACATACTGAGT+TGG + chr3.2:64499990-64500009 MS.gene82040:CDS 35.0%
TTGTTAGGTAAAGTGGAAGA+CGG + chr3.2:64499031-64499050 MS.gene82040:intron 35.0%
TTTAGTGGAGAATCTTATGG+GGG + chr3.2:64499520-64499539 MS.gene82040:intron 35.0%
TTTGGACAAGAATGAGATTG+AGG + chr3.2:64497922-64497941 MS.gene82040:CDS 35.0%
TTTGGGAGTTAGAGATGTTA+GGG + chr3.2:64499079-64499098 MS.gene82040:intron 35.0%
! AAAGTGTCCTCTAGTTGATT+GGG + chr3.2:64500493-64500512 MS.gene82040:CDS 35.0%
! CAAATTGGCTTCACTGAATT+TGG + chr3.2:64497904-64497923 MS.gene82040:CDS 35.0%
! CATACAAGGAGTACAAATTG+GGG - chr3.2:64499814-64499833 None:intergenic 35.0%
! CGATTTTCCTGAATCAAAGA+TGG - chr3.2:64500413-64500432 None:intergenic 35.0%
! GTGCTTGCATTTCTGTTTTA+GGG + chr3.2:64499743-64499762 MS.gene82040:intron 35.0%
! GTTAGGTTTTCTTTTTGTGC+AGG + chr3.2:64498242-64498261 MS.gene82040:intron 35.0%
! TACTCCTTGTATGATTTTGG+TGG + chr3.2:64499821-64499840 MS.gene82040:CDS 35.0%
! TGTGCTTGCATTTCTGTTTT+AGG + chr3.2:64499742-64499761 MS.gene82040:intron 35.0%
! TGTTTTCTGTCTTCAGATGT+AGG + chr3.2:64499682-64499701 MS.gene82040:intron 35.0%
! TTGTGGTAAACCAATTTGCT+TGG + chr3.2:64498030-64498049 MS.gene82040:intron 35.0%
!! AAAAGTGTCCTCTAGTTGAT+TGG + chr3.2:64500492-64500511 MS.gene82040:CDS 35.0%
!! AGAAGGTTTGTTAGGTAAAG+TGG + chr3.2:64499024-64499043 MS.gene82040:intron 35.0%
!! TCCGATACAAAGAGTATCAT+CGG - chr3.2:64498574-64498593 None:intergenic 35.0%
!! TTTGAAAGCATCATGGATCT+AGG + chr3.2:64498448-64498467 MS.gene82040:intron 35.0%
!!! CCTCTCTTTTTTCAAAATGC+CGG + chr3.2:64498935-64498954 MS.gene82040:intron 35.0%
!!! GAAACAGAACGTTTTGAGTT+TGG - chr3.2:64500147-64500166 None:intergenic 35.0%
!!! GTTTTGGTTAGATCATTGGA+TGG + chr3.2:64499349-64499368 MS.gene82040:intron 35.0%
!!! TTTTTTGTAAATACGGGAGC+CGG + chr3.2:64499177-64499196 MS.gene82040:intron 35.0%
AAATAAGCATCAATGCGGGT+TGG + chr3.2:64498527-64498546 MS.gene82040:intron 40.0%
AAGCCTTTGGTTAAGATGTG+TGG + chr3.2:64500051-64500070 MS.gene82040:CDS 40.0%
AAGTGTGGAAGAGAATTGTG+AGG + chr3.2:64498961-64498980 MS.gene82040:intron 40.0%
AATATGTGAGTCTAGGAGGA+AGG + chr3.2:64498868-64498887 MS.gene82040:intron 40.0%
AGAATGTACTGCATCCATGA+AGG - chr3.2:64500837-64500856 None:intergenic 40.0%
AGATCATTGGATGGGAAATG+CGG + chr3.2:64499358-64499377 MS.gene82040:intron 40.0%
AGCTTTCCCATCTTTGATTC+AGG + chr3.2:64500403-64500422 MS.gene82040:CDS 40.0%
AGTGTCTGTTAAGATAGCTG+GGG + chr3.2:64499632-64499651 MS.gene82040:CDS 40.0%
ATCAGCTAAAGATGCTGCTA+TGG + chr3.2:64500080-64500099 MS.gene82040:CDS 40.0%
ATCTTAACAGACACTCTCAG+GGG - chr3.2:64499627-64499646 None:intergenic 40.0%
ATCTTATGGGGGATTTAGAG+GGG + chr3.2:64499531-64499550 MS.gene82040:intron 40.0%
ATGCCACACATCTTAACCAA+AGG - chr3.2:64500057-64500076 None:intergenic 40.0%
ATTCTCTTCCACACTTTCAC+CGG - chr3.2:64498957-64498976 None:intergenic 40.0%
CCAAGTAGCTACATGAATTG+TGG - chr3.2:64498163-64498182 None:intergenic 40.0%
CCAATGATCTAACCAAAACC+GGG - chr3.2:64499348-64499367 None:intergenic 40.0%
CCACAATTCATGTAGCTACT+TGG + chr3.2:64498160-64498179 MS.gene82040:intron 40.0%
CTATCTTAACAGACACTCTC+AGG - chr3.2:64499629-64499648 None:intergenic 40.0%
CTCATGAGATGTATTTGCAG+TGG + chr3.2:64500623-64500642 MS.gene82040:intron 40.0%
CTCTCCCGTTTAAGTATTTG+GGG + chr3.2:64498757-64498776 MS.gene82040:intron 40.0%
CTCTCTCCCGTTTAAGTATT+TGG + chr3.2:64498755-64498774 MS.gene82040:intron 40.0%
GAAGCTGGAGCAAACTTTAT+TGG + chr3.2:64500108-64500127 MS.gene82040:CDS 40.0%
GAATCTTATGGGGGATTTAG+AGG + chr3.2:64499529-64499548 MS.gene82040:intron 40.0%
GAGGAAATAAGCATCAATGC+GGG + chr3.2:64498523-64498542 MS.gene82040:intron 40.0%
GAGTGTCTGTTAAGATAGCT+GGG + chr3.2:64499631-64499650 MS.gene82040:CDS 40.0%
GATTGGGGTTAATGTTGGAA+GGG + chr3.2:64498689-64498708 MS.gene82040:intron 40.0%
GCACTTGGAATCTTATATGG+AGG + chr3.2:64499471-64499490 MS.gene82040:intron 40.0%
GCCGATGATACTCTTTGTAT+CGG + chr3.2:64498570-64498589 MS.gene82040:intron 40.0%
GGCAACAAATATGTGAGTCT+AGG + chr3.2:64498861-64498880 MS.gene82040:intron 40.0%
GGTAGCCCCAAATACTTAAA+CGG - chr3.2:64498765-64498784 None:intergenic 40.0%
GTAGCCCCAAATACTTAAAC+GGG - chr3.2:64498764-64498783 None:intergenic 40.0%
GTCTCGGATAAGAAACACAA+AGG - chr3.2:64499385-64499404 None:intergenic 40.0%
GTTCTGGTAGATAGTGCAAA+GGG + chr3.2:64500515-64500534 MS.gene82040:CDS 40.0%
GTTTGGGAGTTAGAGATGTT+AGG + chr3.2:64499078-64499097 MS.gene82040:intron 40.0%
TCATCCACAAATACTCCAAC+AGG - chr3.2:64500222-64500241 None:intergenic 40.0%
TCCAATTCCACTCGTAAAAG+AGG - chr3.2:64499603-64499622 None:intergenic 40.0%
TGAGTATATTGTCTCGCTTC+TGG + chr3.2:64498347-64498366 MS.gene82040:intron 40.0%
TGATACTCTTTGTATCGGAG+AGG + chr3.2:64498575-64498594 MS.gene82040:intron 40.0%
TGATTGGGGTTAATGTTGGA+AGG + chr3.2:64498688-64498707 MS.gene82040:intron 40.0%
TTCAACAACTGGGAGTTACT+TGG + chr3.2:64498265-64498284 MS.gene82040:CDS 40.0%
TTCTCCATGCAAATGCTGAT+GGG + chr3.2:64500444-64500463 MS.gene82040:CDS 40.0%
TTCTTGTGACCTTGCAAGTT+AGG + chr3.2:64498225-64498244 MS.gene82040:intron 40.0%
TTGGATGTGGTAACTTTGGA+AGG + chr3.2:64499260-64499279 MS.gene82040:intron 40.0%
TTTGTGCAGGTTCAACAACT+GGG + chr3.2:64498255-64498274 MS.gene82040:intron 40.0%
! AAGCAAATATGGTTGGCTCT+TGG + chr3.2:64500688-64500707 MS.gene82040:CDS 40.0%
! ACTAGAGGACACTTTTCATC+AGG - chr3.2:64500488-64500507 None:intergenic 40.0%
! AGAGTGTCTGTTAAGATAGC+TGG + chr3.2:64499630-64499649 MS.gene82040:CDS 40.0%
! AGGCATCCGTCGATATTTTA+TGG + chr3.2:64498595-64498614 MS.gene82040:intron 40.0%
! GAAGCACTTATTCCTCATGT+AGG + chr3.2:64498398-64498417 MS.gene82040:intron 40.0%
! GAGGCACTTGGAATCTTATA+TGG + chr3.2:64499468-64499487 MS.gene82040:intron 40.0%
! GCTTTGTCTAGTTTCAAACC+TGG + chr3.2:64500743-64500762 MS.gene82040:CDS 40.0%
! GGGTGCGAATTGGTTTAATA+CGG + chr3.2:64499289-64499308 MS.gene82040:intron 40.0%
! TGCGAATTGGTTTAATACGG+AGG + chr3.2:64499292-64499311 MS.gene82040:intron 40.0%
! TTGTCTAGTTTCAAACCTGG+AGG + chr3.2:64500746-64500765 MS.gene82040:CDS 40.0%
! TTTAGGGTCACTGGTATATC+AGG + chr3.2:64499759-64499778 MS.gene82040:intron 40.0%
! TTTTGTGCAGGTTCAACAAC+TGG + chr3.2:64498254-64498273 MS.gene82040:intron 40.0%
!! ATATGGTGGATTCGTGGAAT+TGG + chr3.2:64499567-64499586 MS.gene82040:CDS 40.0%
!! CCGGCATTTTGAAAAAAGAG+AGG - chr3.2:64498938-64498957 None:intergenic 40.0%
!! TTCAGCCTCTATTGAGTTGA+GGG + chr3.2:64497955-64497974 MS.gene82040:CDS 40.0%
!! TTTAGTGGGTGATCTTTTGG+AGG + chr3.2:64499433-64499452 MS.gene82040:intron 40.0%
!!! CATTTCTGTTTTAGGGTCAC+TGG + chr3.2:64499750-64499769 MS.gene82040:intron 40.0%
!!! GTTGCTTAGAGGTTTTGAGA+TGG + chr3.2:64498629-64498648 MS.gene82040:intron 40.0%
!!! TAGAGGTTTTGAGATGGTGT+CGG + chr3.2:64498635-64498654 MS.gene82040:intron 40.0%
AAAGCCTCACGAACATTCTC+AGG - chr3.2:64500728-64500747 None:intergenic 45.0%
AAGACCAGACTACCTGGAAT+CGG - chr3.2:64498320-64498339 None:intergenic 45.0%
ACAATGCAGCTTCATGGATC+TGG + chr3.2:64500371-64500390 MS.gene82040:intron 45.0%
ACCAGAACCCAATCAACTAG+AGG - chr3.2:64500503-64500522 None:intergenic 45.0%
ACGAGAATTTCTATGGGGAG+CGG + chr3.2:64498989-64499008 MS.gene82040:intron 45.0%
AGCTAAAGATGCTGCTATGG+CGG + chr3.2:64500083-64500102 MS.gene82040:CDS 45.0%
ATCCGAAGAAGATGGGTACT+TGG + chr3.2:64498796-64498815 MS.gene82040:intron 45.0%
CAATCCTGAGAATGTTCGTG+AGG + chr3.2:64500721-64500740 MS.gene82040:CDS 45.0%
GAGTATCATCGGCGTATTGA+AGG - chr3.2:64498563-64498582 None:intergenic 45.0%
GGTTTAATACGGAGGTTGTG+CGG + chr3.2:64499300-64499319 MS.gene82040:intron 45.0%
GTGAAGCCAATTTGTCACCA+TGG - chr3.2:64497898-64497917 None:intergenic 45.0%
GTGGTTGGATGTGGTAACTT+TGG + chr3.2:64499256-64499275 MS.gene82040:intron 45.0%
GTTCTCCATGCAAATGCTGA+TGG + chr3.2:64500443-64500462 MS.gene82040:CDS 45.0%
GTTTGGACAATGCAGCTTCA+TGG + chr3.2:64500365-64500384 MS.gene82040:intron 45.0%
TAGTTTCAAACCTGGAGGAG+TGG + chr3.2:64500751-64500770 MS.gene82040:CDS 45.0%
TCAAAATGCCGGTGAAAGTG+TGG + chr3.2:64498946-64498965 MS.gene82040:intron 45.0%
TCAGACCCTCAACTCAATAG+AGG - chr3.2:64497963-64497982 None:intergenic 45.0%
TCCACTCGTAAAAGAGGCAA+GGG - chr3.2:64499597-64499616 None:intergenic 45.0%
TCCCAAGTACCCATCTTCTT+CGG - chr3.2:64498801-64498820 None:intergenic 45.0%
TCCGAAGAAGATGGGTACTT+GGG + chr3.2:64498797-64498816 MS.gene82040:intron 45.0%
TCCTCTAGTTGATTGGGTTC+TGG + chr3.2:64500499-64500518 MS.gene82040:CDS 45.0%
TCCTTCCAAAGTGAATGCTC+CGG - chr3.2:64499152-64499171 None:intergenic 45.0%
TGCATCAGATGGCATTCAGA+AGG + chr3.2:64500793-64500812 MS.gene82040:CDS 45.0%
TGGAAGGGAGTTCATAGAGA+TGG + chr3.2:64498704-64498723 MS.gene82040:intron 45.0%
TGGGAAATGGGATGAATACC+CGG + chr3.2:64499327-64499346 MS.gene82040:intron 45.0%
TTCCACTCGTAAAAGAGGCA+AGG - chr3.2:64499598-64499617 None:intergenic 45.0%
TTTCCTCTCATCCCTTCATG+AGG - chr3.2:64498510-64498529 None:intergenic 45.0%
! AAATATGGTTGGCTCTTGGC+AGG + chr3.2:64500692-64500711 MS.gene82040:CDS 45.0%
! AAGTATTTGGGGCTACCGAT+GGG + chr3.2:64498768-64498787 MS.gene82040:intron 45.0%
! ACAAGGAGTACAAATTGGGG+AGG - chr3.2:64499811-64499830 None:intergenic 45.0%
! AGAGCCTGTTGGAGTATTTG+TGG + chr3.2:64500215-64500234 MS.gene82040:CDS 45.0%
! ATGGGATGAATACCCGGTTT+TGG + chr3.2:64499333-64499352 MS.gene82040:intron 45.0%
! CAAGGAGTACAAATTGGGGA+GGG - chr3.2:64499810-64499829 None:intergenic 45.0%
! CAGTGGTGAAGCATTCGATT+GGG + chr3.2:64500640-64500659 MS.gene82040:intron 45.0%
! CGGTCTTTTGTGGAAGTTTG+TGG - chr3.2:64498300-64498319 None:intergenic 45.0%
! CTTCAGCCTCTATTGAGTTG+AGG + chr3.2:64497954-64497973 MS.gene82040:CDS 45.0%
! GCCTCTTTTACGAGTGGAAT+TGG + chr3.2:64499599-64499618 MS.gene82040:CDS 45.0%
! GGGAGGAAAGAAGGTTTGTT+AGG + chr3.2:64499016-64499035 MS.gene82040:intron 45.0%
! GGTTCTGGTAGATAGTGCAA+AGG + chr3.2:64500514-64500533 MS.gene82040:CDS 45.0%
! TAAGTATTTGGGGCTACCGA+TGG + chr3.2:64498767-64498786 MS.gene82040:intron 45.0%
! TACAACCGGAGCATTCACTT+TGG + chr3.2:64499144-64499163 MS.gene82040:intron 45.0%
! TACCTGGAATCGGTCTTTTG+TGG - chr3.2:64498310-64498329 None:intergenic 45.0%
! TGTGGTAACTTTGGAAGGAG+TGG + chr3.2:64499265-64499284 MS.gene82040:intron 45.0%
! TTCCACAAAAGACCGATTCC+AGG + chr3.2:64498305-64498324 MS.gene82040:CDS 45.0%
!! ACTCTAAAGGCGTTGCTTAG+AGG + chr3.2:64498618-64498637 MS.gene82040:intron 45.0%
!! CACCCACTAAAGCGTCTTTT+TGG - chr3.2:64499424-64499443 None:intergenic 45.0%
!! CGCTTTAGTGGGTGATCTTT+TGG + chr3.2:64499430-64499449 MS.gene82040:intron 45.0%
!!! AGAGGTTTTGAGATGGTGTC+GGG + chr3.2:64498636-64498655 MS.gene82040:intron 45.0%
!!! CCCGGTTTTGGTTAGATCAT+TGG + chr3.2:64499345-64499364 MS.gene82040:intron 45.0%
!!! GGGCAGTTTTAGAGGTGTTT+TGG + chr3.2:64499652-64499671 MS.gene82040:intron 45.0%
AAGCCTCATGAAGGGATGAG+AGG + chr3.2:64498504-64498523 MS.gene82040:intron 50.0%
ACTGCTTCTGTCATGACAGC+AGG + chr3.2:64499706-64499725 MS.gene82040:intron 50.0%
AGCGGCATATGTGCATCAGA+TGG + chr3.2:64500782-64500801 MS.gene82040:CDS 50.0%
ATGTGAGTCGTTTGGCGAAG+TGG + chr3.2:64499108-64499127 MS.gene82040:intron 50.0%
ATTCCAAGTGCCTCCTCCTA+CGG - chr3.2:64499462-64499481 None:intergenic 50.0%
ATTTCTATGGGGAGCGGTGA+AGG + chr3.2:64498995-64499014 MS.gene82040:intron 50.0%
CACTCGTAAAAGAGGCAAGG+GGG - chr3.2:64499595-64499614 None:intergenic 50.0%
CCACTCGTAAAAGAGGCAAG+GGG - chr3.2:64499596-64499615 None:intergenic 50.0%
CGTGTGGGAAGAGAGTTTAG+TGG + chr3.2:64499505-64499524 MS.gene82040:intron 50.0%
CTCCCAAACCTCCTAAAGAC+CGG - chr3.2:64499067-64499086 None:intergenic 50.0%
CTGCTTCTGTCATGACAGCA+GGG + chr3.2:64499707-64499726 MS.gene82040:intron 50.0%
CTGGTAGATAGTGCAAAGGG+TGG + chr3.2:64500518-64500537 MS.gene82040:CDS 50.0%
GAGGCGAAAACTGTTCGTGT+GGG + chr3.2:64499490-64499509 MS.gene82040:intron 50.0%
GAGGTGGAGGCTAATACAAC+CGG + chr3.2:64499130-64499149 MS.gene82040:intron 50.0%
GGAGCGAATCCGAAGAAGAT+GGG + chr3.2:64498789-64498808 MS.gene82040:intron 50.0%
GGGAGTTAGAGATGTTAGGG+TGG + chr3.2:64499082-64499101 MS.gene82040:intron 50.0%
GGTGGTGAATGTGAGTCGTT+TGG + chr3.2:64499100-64499119 MS.gene82040:intron 50.0%
TAATACGGAGGTTGTGCGGA+AGG + chr3.2:64499304-64499323 MS.gene82040:intron 50.0%
TAGATAGTGCAAAGGGTGGC+AGG + chr3.2:64500522-64500541 MS.gene82040:CDS 50.0%
TATGGGGGATTTAGAGGGGT+GGG + chr3.2:64499535-64499554 MS.gene82040:intron 50.0%
TCCCAAACCTCCTAAAGACC+GGG - chr3.2:64499066-64499085 None:intergenic 50.0%
TGTAAATACGGGAGCCGGAT+TGG + chr3.2:64499182-64499201 MS.gene82040:intron 50.0%
TGTGAGTCTAGGAGGAAGGA+TGG + chr3.2:64498872-64498891 MS.gene82040:intron 50.0%
TTATGGGGGATTTAGAGGGG+TGG + chr3.2:64499534-64499553 MS.gene82040:intron 50.0%
TTCTTCGGATTCGCTCCCAT+CGG - chr3.2:64498786-64498805 None:intergenic 50.0%
TTGTGCGGAAGGTGGGAAAT+GGG + chr3.2:64499315-64499334 MS.gene82040:intron 50.0%
TTTAGAGGGGTGGGTGTGTT+CGG + chr3.2:64499544-64499563 MS.gene82040:intron 50.0%
TTTCTATGGGGAGCGGTGAA+GGG + chr3.2:64498996-64499015 MS.gene82040:intron 50.0%
! AAGACCGATTCCAGGTAGTC+TGG + chr3.2:64498313-64498332 MS.gene82040:intron 50.0%
! ACCGGAGCATTCACTTTGGA+AGG + chr3.2:64499148-64499167 MS.gene82040:intron 50.0%
! AGCTTCATGGATCTGGTTCG+CGG + chr3.2:64500378-64500397 MS.gene82040:intron 50.0%
! GCAGTGGTGAAGCATTCGAT+TGG + chr3.2:64500639-64500658 MS.gene82040:intron 50.0%
! GGTAACTTTGGAAGGAGTGG+CGG + chr3.2:64499268-64499287 MS.gene82040:intron 50.0%
! GTAACTTTGGAAGGAGTGGC+GGG + chr3.2:64499269-64499288 MS.gene82040:intron 50.0%
! TGAGATGGTGTCGGGTTTGA+AGG + chr3.2:64498644-64498663 MS.gene82040:intron 50.0%
!! GATAGCTGGGGCAGTTTTAG+AGG + chr3.2:64499644-64499663 MS.gene82040:CDS 50.0%
!! GATCTTTTGGAGGCAACCGT+AGG + chr3.2:64499443-64499462 MS.gene82040:intron 50.0%
!! GTTCGGATATGGTGGATTCG+TGG + chr3.2:64499561-64499580 MS.gene82040:CDS 50.0%
!! TAAGCATCAATGCGGGTTGG+TGG + chr3.2:64498530-64498549 MS.gene82040:intron 50.0%
!! TTTTGCTTCGAGGTGGTGGT+TGG + chr3.2:64499241-64499260 MS.gene82040:intron 50.0%
AGCGGTGAAGGGAGGAAAGA+AGG + chr3.2:64499007-64499026 MS.gene82040:intron 55.0%
CACCACCTCGAAGCAAAAGC+TGG - chr3.2:64499239-64499258 None:intergenic 55.0%
CCCAAACCTCCTAAAGACCG+GGG - chr3.2:64499065-64499084 None:intergenic 55.0%
CTACTGACATCCACTCCTCC+AGG - chr3.2:64500764-64500783 None:intergenic 55.0%
GATTGTGGAGCAGAGCCTGT+TGG + chr3.2:64500204-64500223 MS.gene82040:CDS 55.0%
GGAGGAGTGGATGTCAGTAG+CGG + chr3.2:64500764-64500783 MS.gene82040:CDS 55.0%
GGAGGCGAAAACTGTTCGTG+TGG + chr3.2:64499489-64499508 MS.gene82040:intron 55.0%
GGCTCCCATCAGCATTTGCA+TGG - chr3.2:64500451-64500470 None:intergenic 55.0%
GGGAGCGAATCCGAAGAAGA+TGG + chr3.2:64498788-64498807 MS.gene82040:intron 55.0%
GTGGGTGTGTTCGGATATGG+TGG + chr3.2:64499553-64499572 MS.gene82040:CDS 55.0%
GTGTGTCAACCCCGGTCTTT+AGG + chr3.2:64499053-64499072 MS.gene82040:intron 55.0%
GTTGTGCGGAAGGTGGGAAA+TGG + chr3.2:64499314-64499333 MS.gene82040:intron 55.0%
TGAGTCGTTTGGCGAAGTGG+AGG + chr3.2:64499111-64499130 MS.gene82040:intron 55.0%
TGTCAACCCCGGTCTTTAGG+AGG + chr3.2:64499056-64499075 MS.gene82040:intron 55.0%
! ACCCCGGTCTTTAGGAGGTT+TGG + chr3.2:64499061-64499080 MS.gene82040:intron 55.0%
! ATGGTTGGCTCTTGGCAGGA+GGG + chr3.2:64500696-64500715 MS.gene82040:CDS 55.0%
! CAGCTTTTGCTTCGAGGTGG+TGG + chr3.2:64499237-64499256 MS.gene82040:intron 55.0%
! CCCCGGTCTTTAGGAGGTTT+GGG + chr3.2:64499062-64499081 MS.gene82040:intron 55.0%
! CCCCTTGCCTCTTTTACGAG+TGG + chr3.2:64499593-64499612 MS.gene82040:CDS 55.0%
! GCTTCATGGATCTGGTTCGC+GGG + chr3.2:64500379-64500398 MS.gene82040:intron 55.0%
! TATGGTTGGCTCTTGGCAGG+AGG + chr3.2:64500695-64500714 MS.gene82040:CDS 55.0%
! TGTGGCCAGCTTTTGCTTCG+AGG + chr3.2:64499231-64499250 MS.gene82040:intron 55.0%
! TTCGAGGTGGTGGTTGGATG+TGG + chr3.2:64499247-64499266 MS.gene82040:intron 55.0%
!! CTTTTGGAGGCAACCGTAGG+AGG + chr3.2:64499446-64499465 MS.gene82040:intron 55.0%
ACGGAGGTTGTGCGGAAGGT+GGG + chr3.2:64499308-64499327 MS.gene82040:intron 60.0%
GGAAGACGGTGTGTCAACCC+CGG + chr3.2:64499045-64499064 MS.gene82040:intron 60.0%
GGGGTGGGTGTGTTCGGATA+TGG + chr3.2:64499550-64499569 MS.gene82040:CDS 60.0%
GTCGTTTGGCGAAGTGGAGG+TGG + chr3.2:64499114-64499133 MS.gene82040:intron 60.0%
GTTTGGCGAAGTGGAGGTGG+AGG + chr3.2:64499117-64499136 MS.gene82040:intron 60.0%
TACGGAGGTTGTGCGGAAGG+TGG + chr3.2:64499307-64499326 MS.gene82040:intron 60.0%
TTGGAGGCAACCGTAGGAGG+AGG + chr3.2:64499449-64499468 MS.gene82040:intron 60.0%
! GGCCAGCTTTTGCTTCGAGG+TGG + chr3.2:64499234-64499253 MS.gene82040:intron 60.0%
!! AAGGAGTGGCGGGTGCGAAT+TGG + chr3.2:64499279-64499298 MS.gene82040:intron 60.0%
!! CAACCGTAGGAGGAGGCACT+TGG + chr3.2:64499456-64499475 MS.gene82040:intron 60.0%
CTATGGGGAGCGGTGAAGGG+AGG + chr3.2:64498999-64499018 MS.gene82040:intron 65.0%
GCTGCTATGGCGGCAGAAGC+TGG + chr3.2:64500093-64500112 MS.gene82040:CDS 65.0%


Chromosome Type Strat End Strand Name
chr3.2 gene 64497884 64500868 64497884 ID=MS.gene82040
chr3.2 mRNA 64497884 64500868 64497884 ID=MS.gene82040.t1;Parent=MS.gene82040
chr3.2 exon 64497884 64497976 64497884 ID=MS.gene82040.t1.exon1;Parent=MS.gene82040.t1
chr3.2 CDS 64497884 64497976 64497884 ID=cds.MS.gene82040.t1;Parent=MS.gene82040.t1
chr3.2 exon 64498264 64498326 64498264 ID=MS.gene82040.t1.exon2;Parent=MS.gene82040.t1
chr3.2 CDS 64498264 64498326 64498264 ID=cds.MS.gene82040.t1;Parent=MS.gene82040.t1
chr3.2 exon 64499549 64499665 64499549 ID=MS.gene82040.t1.exon3;Parent=MS.gene82040.t1
chr3.2 CDS 64499549 64499665 64499549 ID=cds.MS.gene82040.t1;Parent=MS.gene82040.t1
chr3.2 exon 64499764 64499842 64499764 ID=MS.gene82040.t1.exon4;Parent=MS.gene82040.t1
chr3.2 CDS 64499764 64499842 64499764 ID=cds.MS.gene82040.t1;Parent=MS.gene82040.t1
chr3.2 exon 64499932 64500296 64499932 ID=MS.gene82040.t1.exon5;Parent=MS.gene82040.t1
chr3.2 CDS 64499932 64500296 64499932 ID=cds.MS.gene82040.t1;Parent=MS.gene82040.t1
chr3.2 exon 64500380 64500543 64500380 ID=MS.gene82040.t1.exon6;Parent=MS.gene82040.t1
chr3.2 CDS 64500380 64500543 64500380 ID=cds.MS.gene82040.t1;Parent=MS.gene82040.t1
chr3.2 exon 64500643 64500868 64500643 ID=MS.gene82040.t1.exon7;Parent=MS.gene82040.t1
chr3.2 CDS 64500643 64500868 64500643 ID=cds.MS.gene82040.t1;Parent=MS.gene82040.t1
Gene Sequence

>MS.gene82040

ATGCTTGATTTCCATGGTGACAAATTGGCTTCACTGAATTTGGACAAGAATGAGATTGAGGAACGCATAGCTTCAGCCTCTATTGAGTTGAGGGTCTGAAGCTCTAACACCATAAAGATATCCTAATCAAGAGAAGAAGAGAGAATTTGTGGTAAACCAATTTGCTTGGTAAACATTGCAGATCTGAGTGAGATATATAGTGAACTAATTTCTAACTAATTCTTCTAGGTGAAAGCTAACCGACTCCTAAATGCATTAACTAATCTCTTTACATATCCACAATTCATGTAGCTACTTGGCATTTTTATGTTATTAACTTCAATTTTCCATGTACATTATTGTTCTTGTGACCTTGCAAGTTAGGTTTTCTTTTTGTGCAGGTTCAACAACTGGGAGTTACTTGGAACTTAGAGCCACAAACTTCCACAAAAGACCGATTCCAGGTAGTCTGGTCTTTATTTACTGAGTATATTGTCTCGCTTCTGGTATATGTCTCGATTTTCAAGAAATCTAAGAAGCACTTATTCCTCATGTAGGTTTAGTTTCATGTTTTTGCTTATATTGTTTGAAAGCATCATGGATCTAGGTCATAAATCGTAAATGAGCCACTATTTAAATGAAAGCCTCATGAAGGGATGAGAGGAAATAAGCATCAATGCGGGTTGGTGGTTTCACACCTTCAATACGCCGATGATACTCTTTGTATCGGAGAGGCATCCGTCGATATTTTATGGACTCTAAAGGCGTTGCTTAGAGGTTTTGAGATGGTGTCGGGTTTGAAGGTGAACTTCTATAAAAGTTGTTTGATTGGGGTTAATGTTGGAAGGGAGTTCATAGAGATGGCGTGCAACTTTATGAATTGTAGAGAGGGCTCTCTCCCGTTTAAGTATTTGGGGCTACCGATGGGAGCGAATCCGAAGAAGATGGGTACTTGGGAACCTTTGATTGAAAGTTTAAAGAAGAAGCTAAACTCTTGGGGCAACAAATATGTGAGTCTAGGAGGAAGGATGGTTCTTTTAAATGCCGTGTTGAATGCAATTCCTATTTTCTACCTCTCTTTTTTCAAAATGCCGGTGAAAGTGTGGAAGAGAATTGTGAGGATTCAACGAGAATTTCTATGGGGAGCGGTGAAGGGAGGAAAGAAGGTTTGTTAGGTAAAGTGGAAGACGGTGTGTCAACCCCGGTCTTTAGGAGGTTTGGGAGTTAGAGATGTTAGGGTGGTGAATGTGAGTCGTTTGGCGAAGTGGAGGTGGAGGCTAATACAACCGGAGCATTCACTTTGGAAGGAAGTTCTTTTTTGTAAATACGGGAGCCGGATTGGTTTTTTATTAAATGCGTATGCAAATTTGTGGCCAGCTTTTGCTTCGAGGTGGTGGTTGGATGTGGTAACTTTGGAAGGAGTGGCGGGTGCGAATTGGTTTAATACGGAGGTTGTGCGGAAGGTGGGAAATGGGATGAATACCCGGTTTTGGTTAGATCATTGGATGGGAAATGCGGCCCTTTGTGTTTCTTATCCGAGACTCTTCTCAATTTCTAACCAAAAAGACGCTTTAGTGGGTGATCTTTTGGAGGCAACCGTAGGAGGAGGCACTTGGAATCTTATATGGAGGCGAAAACTGTTCGTGTGGGAAGAGAGTTTAGTGGAGAATCTTATGGGGGATTTAGAGGGGTGGGTGTGTTCGGATATGGTGGATTCGTGGAATTGGAACCCCCTTGCCTCTTTTACGAGTGGAATTGGAACCCCTGAGAGTGTCTGTTAAGATAGCTGGGGCAGTTTTAGAGGTGTTTTGGACTTTTTTGTTTTCTGTCTTCAGATGTAGGTACTGCTTCTGTCATGACAGCAGGGTTGCAGTTTTGCTGTGCTTGCATTTCTGTTTTAGGGTCACTGGTATATCAGGCCCTTTGTATTTGTTTTGTCTCTTTCCCTCCCCAATTTGTACTCCTTGTATGATTTTGGTGGTTAATATATAAGCTGATTCAAAAAAAAAAAAAAAACAAATTTCGAAGTACAAGGTTCTATCTGAAAGATTTAAATATAATTTCTGTAGGTTTGAAAGGAAATAAGCTTCAATTTTCTAGCATAAGATTCGGTCCAAAGTATGAAGTTTCTTGCAAACATACTGAGTTGGCAAATGTTTCATGTTCATCAAAGGAACTTGAAATGATTAAGCCTTTGGTTAAGATGTGTGGCATTACATCAGCTAAAGATGCTGCTATGGCGGCAGAAGCTGGAGCAAACTTTATTGGAATGATCGTGTGGCCAAACTCAAAACGTTCTGTTTCACTTTCTGTTGCAAAGGAGATATCAAAAGTTGCAAGAGATTGTGGAGCAGAGCCTGTTGGAGTATTTGTGGATGATGATGCAGAAACAATATTAAGAGCTTCTGATGCATCAAATCTTGAGTTTGTGCAGGTACATTTTTACCCGACTTTTATGCATGTTCAACGACAGTTAAATGCTTGGTGACATTGAAATCTTGAGTTTGGACAATGCAGCTTCATGGATCTGGTTCGCGGGCAGCTTTCCCATCTTTGATTCAGGAAAATCGTGTAATATATGTTCTCCATGCAAATGCTGATGGGAGCCTTTTAAACACAATTCCTGATGAAAAGTGTCCTCTAGTTGATTGGGTTCTGGTAGATAGTGCAAAGGGTGGCAGGTAAAGAGATAGTTCTTGTTGTAAAAACTTAATTGCTTGCCAAACAATCTTTTTTTTTTAGTATAATAATGTCATAGTACTCATGAGATGTATTTGCAGTGGTGAAGCATTCGATTGGGCCCAGTTTAAATTACCAAAAATTAGAAGCAAATATGGTTGGCTCTTGGCAGGAGGGATCAATCCTGAGAATGTTCGTGAGGCTTTGTCTAGTTTCAAACCTGGAGGAGTGGATGTCAGTAGCGGCATATGTGCATCAGATGGCATTCAGAAGGATCAATCAAGAATAGCTTCCTTCATGGATGCAGTACATTCTGTTCAGTACTGA
Protein sequence

>MS.gene82040.t1

MLDFHGDKLASLNLDKNEIEERIASASIELRVQQLGVTWNLEPQTSTKDRFQRGGCVRIWWIRGIGTPLPLLRVELEPLRVSVKIAGAVLEGHWYIRPFVFVLSLSLPNLYSLYDFGGLKGNKLQFSSIRFGPKYEVSCKHTELANVSCSSKELEMIKPLVKMCGITSAKDAAMAAEAGANFIGMIVWPNSKRSVSLSVAKEISKVARDCGAEPVGVFVDDDAETILRASDASNLEFVQLHGSGSRAAFPSLIQENRVIYVLHANADGSLLNTIPDEKCPLVDWVLVDSAKGGSGEAFDWAQFKLPKIRSKYGWLLAGGINPENVREALSSFKPGGVDVSSGICASDGIQKDQSRIASFMDAVHSVQY