Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene031958.t1 | XP_003600920.2 | 96 | 251 | 10 | 0 | 118 | 368 | 25 | 275 | 6.00E-132 | 480.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene031958.t1 | Q42440 | 64.1 | 251 | 90 | 0 | 118 | 368 | 25 | 275 | 1.7e-90 | 334.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene031958.t1 | G7JBT1 | 96.0 | 251 | 10 | 0 | 118 | 368 | 25 | 275 | 4.3e-132 | 480.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene031958 | MS.gene82548 | PPI |
| MS.gene031958 | MS.gene82040 | PPI |
| MS.gene031958 | MS.gene008045 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene031958.t1 | MTR_3g070890 | 96.016 | 251 | 10 | 0 | 118 | 368 | 25 | 275 | 4.08e-165 | 462 |
| MS.gene031958.t1 | MTR_3g449480 | 96.016 | 251 | 10 | 0 | 118 | 368 | 55 | 305 | 2.48e-164 | 462 |
| MS.gene031958.t1 | MTR_3g449480 | 96.016 | 251 | 10 | 0 | 118 | 368 | 25 | 275 | 3.77e-164 | 460 |
| MS.gene031958.t1 | MTR_3g449480 | 96.016 | 251 | 10 | 0 | 118 | 368 | 25 | 275 | 3.77e-164 | 460 |
| MS.gene031958.t1 | MTR_3g449480 | 96.016 | 251 | 10 | 0 | 118 | 368 | 39 | 289 | 4.45e-164 | 460 |
| MS.gene031958.t1 | MTR_3g449480 | 96.016 | 251 | 10 | 0 | 118 | 368 | 94 | 344 | 1.58e-162 | 459 |
| MS.gene031958.t1 | MTR_3g449480 | 98.485 | 66 | 1 | 0 | 163 | 228 | 1 | 66 | 2.80e-25 | 105 |
| MS.gene031958.t1 | MTR_3g449480 | 96.016 | 251 | 10 | 0 | 118 | 368 | 193 | 443 | 5.81e-162 | 461 |
| MS.gene031958.t1 | MTR_3g449480 | 95.495 | 111 | 5 | 0 | 118 | 228 | 55 | 165 | 1.18e-54 | 186 |
| MS.gene031958.t1 | MTR_3g449480 | 96.016 | 251 | 10 | 0 | 118 | 368 | 163 | 413 | 6.72e-162 | 460 |
| MS.gene031958.t1 | MTR_3g449480 | 95.495 | 111 | 5 | 0 | 118 | 228 | 25 | 135 | 8.58e-55 | 186 |
| MS.gene031958.t1 | MTR_3g070890 | 97.087 | 206 | 6 | 0 | 163 | 368 | 1 | 206 | 5.37e-144 | 406 |
| MS.gene031958.t1 | MTR_3g449480 | 97.087 | 206 | 6 | 0 | 163 | 368 | 1 | 206 | 5.97e-143 | 404 |
| MS.gene031958.t1 | MTR_3g449480 | 96.023 | 176 | 7 | 0 | 118 | 293 | 39 | 214 | 3.91e-107 | 313 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene031958.t1 | AT1G07780 | 64.143 | 251 | 90 | 0 | 118 | 368 | 25 | 275 | 2.52e-116 | 339 |
| MS.gene031958.t1 | AT1G07780 | 64.143 | 251 | 90 | 0 | 118 | 368 | 25 | 275 | 2.52e-116 | 339 |
| MS.gene031958.t1 | AT1G07780 | 64.143 | 251 | 90 | 0 | 118 | 368 | 25 | 275 | 2.52e-116 | 339 |
| MS.gene031958.t1 | AT1G07780 | 64.143 | 251 | 90 | 0 | 118 | 368 | 25 | 275 | 2.52e-116 | 339 |
| MS.gene031958.t1 | AT1G07780 | 64.143 | 251 | 90 | 0 | 118 | 368 | 25 | 275 | 2.52e-116 | 339 |
| MS.gene031958.t1 | AT1G07780 | 64.143 | 251 | 90 | 0 | 118 | 368 | 25 | 275 | 2.52e-116 | 339 |
| MS.gene031958.t1 | AT1G07780 | 64.143 | 251 | 90 | 0 | 118 | 368 | 25 | 275 | 2.52e-116 | 339 |
| MS.gene031958.t1 | AT1G07780 | 64.143 | 251 | 90 | 0 | 118 | 368 | 25 | 275 | 2.52e-116 | 339 |
| MS.gene031958.t1 | AT5G05590 | 64.143 | 251 | 90 | 0 | 118 | 368 | 25 | 275 | 2.76e-116 | 339 |
| MS.gene031958.t1 | AT1G07780 | 71.845 | 206 | 58 | 0 | 163 | 368 | 1 | 206 | 5.17e-108 | 315 |
| MS.gene031958.t1 | AT1G07780 | 61.932 | 176 | 67 | 0 | 118 | 293 | 25 | 200 | 9.85e-74 | 228 |
| MS.gene031958.t1 | AT1G07780 | 61.932 | 176 | 67 | 0 | 118 | 293 | 25 | 200 | 9.85e-74 | 228 |
| MS.gene031958.t1 | AT5G05590 | 61.932 | 176 | 67 | 0 | 118 | 293 | 25 | 200 | 1.32e-73 | 228 |
| MS.gene031958.t1 | AT1G07780 | 61.932 | 176 | 67 | 0 | 118 | 293 | 25 | 200 | 1.42e-73 | 228 |
| MS.gene031958.t1 | AT1G07780 | 61.932 | 176 | 67 | 0 | 118 | 293 | 25 | 200 | 1.42e-73 | 228 |
| MS.gene031958.t1 | AT5G05590 | 61.932 | 176 | 67 | 0 | 118 | 293 | 25 | 200 | 1.71e-73 | 228 |
| MS.gene031958.t1 | AT1G29410 | 60.795 | 176 | 69 | 0 | 118 | 293 | 4 | 179 | 1.11e-71 | 222 |
| MS.gene031958.t1 | AT1G29410 | 59.016 | 183 | 75 | 0 | 111 | 293 | 18 | 200 | 1.29e-71 | 223 |
| MS.gene031958.t1 | AT1G29410 | 59.016 | 183 | 75 | 0 | 111 | 293 | 18 | 200 | 1.29e-71 | 223 |
| MS.gene031958.t1 | AT1G29410 | 60.795 | 176 | 69 | 0 | 118 | 293 | 4 | 179 | 1.96e-71 | 223 |
| MS.gene031958.t1 | AT1G29410 | 60.795 | 176 | 69 | 0 | 118 | 293 | 4 | 179 | 1.96e-71 | 223 |
| MS.gene031958.t1 | AT1G29410 | 60.795 | 176 | 69 | 0 | 118 | 293 | 25 | 200 | 3.72e-71 | 223 |
| MS.gene031958.t1 | AT1G29410 | 60.795 | 176 | 69 | 0 | 118 | 293 | 25 | 200 | 3.72e-71 | 223 |
| MS.gene031958.t1 | AT5G05590 | 48.899 | 227 | 84 | 2 | 118 | 312 | 25 | 251 | 1.08e-67 | 214 |
Find 91 sgRNAs with CRISPR-Local
Find 292 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAAATTGGCTTCACTGAATT+TGG | 0.096000 | 3.4:+70384033 | MS.gene031958:CDS |
| CATCAGGAATTGTGTTTAAA+AGG | 0.165069 | 3.4:-70386598 | None:intergenic |
| ATCATACAAGGAGTACAAAT+TGG | 0.210922 | 3.4:-70385942 | None:intergenic |
| TTGTACTCCTTGTATGATTT+TGG | 0.233780 | 3.4:+70385947 | MS.gene031958:CDS |
| GAAGCTGGAGCAAACTTTAT+TGG | 0.237005 | 3.4:+70386237 | MS.gene031958:CDS |
| TCCTCTAGTTGATTGGGTTC+TGG | 0.309444 | 3.4:+70386628 | MS.gene031958:CDS |
| TGATTTCCATGGTGACAAAT+TGG | 0.325304 | 3.4:+70384018 | MS.gene031958:CDS |
| GCTGCTATGGCGGCAGAAGC+TGG | 0.329600 | 3.4:+70386222 | MS.gene031958:CDS |
| AGCTTTCCCATCTTTGATTC+AGG | 0.337440 | 3.4:+70386532 | MS.gene031958:CDS |
| ACTTGAAATGATTAAGCCTT+TGG | 0.345666 | 3.4:+70386167 | MS.gene031958:CDS |
| GGGGTGGGTGTGTTCGGATA+TGG | 0.356830 | 3.4:+70385679 | MS.gene031958:CDS |
| TTTAGAGGGGTGGGTGTGTT+CGG | 0.357031 | 3.4:+70385673 | MS.gene031958:intron |
| TTTAGGGTCACTGGTATATC+AGG | 0.359938 | 3.4:+70385888 | MS.gene031958:intron |
| GTTTGGACAATGCAGCTTCA+TGG | 0.372122 | 3.4:+70386494 | MS.gene031958:intron |
| TTCAGCCTCTATTGAGTTGA+GGG | 0.374285 | 3.4:+70384084 | MS.gene031958:CDS |
| ATCAAGAATAGCTTCCTTCA+TGG | 0.376096 | 3.4:+70386949 | MS.gene031958:CDS |
| ATATGGTGGATTCGTGGAAT+TGG | 0.378729 | 3.4:+70385696 | MS.gene031958:CDS |
| AGAGTGTCTGTTAAGATAGC+TGG | 0.378785 | 3.4:+70385759 | MS.gene031958:CDS |
| AAAAGTGTCCTCTAGTTGAT+TGG | 0.384087 | 3.4:+70386621 | MS.gene031958:CDS |
| TCATACAAGGAGTACAAATT+GGG | 0.388498 | 3.4:-70385941 | None:intergenic |
| TTCAACAACTGGGAGTTACT+TGG | 0.396508 | 3.4:+70384394 | MS.gene031958:CDS |
| CTATCTTAACAGACACTCTC+AGG | 0.403921 | 3.4:-70385755 | None:intergenic |
| TTGCAAGAAACTTCATACTT+TGG | 0.418663 | 3.4:-70386105 | None:intergenic |
| ACAATGCAGCTTCATGGATC+TGG | 0.426005 | 3.4:+70386500 | MS.gene031958:intron |
| CAGTGGTGAAGCATTCGATT+GGG | 0.429512 | 3.4:+70386769 | MS.gene031958:intron |
| ATAATTTCTGTAGGTTTGAA+AGG | 0.437678 | 3.4:+70386048 | MS.gene031958:intron |
| AGCTTCATGGATCTGGTTCG+CGG | 0.464460 | 3.4:+70386507 | MS.gene031958:intron |
| TCATCCACAAATACTCCAAC+AGG | 0.465466 | 3.4:-70386348 | None:intergenic |
| TTCCACAAAAGACCGATTCC+AGG | 0.472417 | 3.4:+70384434 | MS.gene031958:CDS |
| AAGCAAATATGGTTGGCTCT+TGG | 0.483948 | 3.4:+70386817 | MS.gene031958:CDS |
| AAAGTGTCCTCTAGTTGATT+GGG | 0.489124 | 3.4:+70386622 | MS.gene031958:CDS |
| GTGGGTGTGTTCGGATATGG+TGG | 0.493398 | 3.4:+70385682 | MS.gene031958:CDS |
| AAATATGGTTGGCTCTTGGC+AGG | 0.497385 | 3.4:+70386821 | MS.gene031958:CDS |
| TGTTTCACTTTCTGTTGCAA+AGG | 0.498388 | 3.4:+70386290 | MS.gene031958:CDS |
| TTTGGACAAGAATGAGATTG+AGG | 0.499147 | 3.4:+70384051 | MS.gene031958:CDS |
| TCCAATTCCACTCGTAAAAG+AGG | 0.500369 | 3.4:-70385729 | None:intergenic |
| AAAGCCTCACGAACATTCTC+AGG | 0.505756 | 3.4:-70386854 | None:intergenic |
| TCAAAAGTTGCAAGAGATTG+TGG | 0.507409 | 3.4:+70386318 | MS.gene031958:CDS |
| TAGATAGTGCAAAGGGTGGC+AGG | 0.516369 | 3.4:+70386651 | MS.gene031958:CDS |
| GAGTGTCTGTTAAGATAGCT+GGG | 0.517565 | 3.4:+70385760 | MS.gene031958:CDS |
| AGAGCCTGTTGGAGTATTTG+TGG | 0.521575 | 3.4:+70386344 | MS.gene031958:CDS |
| ATCAAATCTTGAGTTTGTGC+AGG | 0.523243 | 3.4:+70386404 | MS.gene031958:CDS |
| GCAGTGGTGAAGCATTCGAT+TGG | 0.523251 | 3.4:+70386768 | MS.gene031958:intron |
| TTCTTGCAAACATACTGAGT+TGG | 0.523300 | 3.4:+70386119 | MS.gene031958:CDS |
| AAATGTTTCATGTTCATCAA+AGG | 0.525170 | 3.4:+70386143 | MS.gene031958:CDS |
| ATCAGCTAAAGATGCTGCTA+TGG | 0.526392 | 3.4:+70386209 | MS.gene031958:CDS |
| TCAGACCCTCAACTCAATAG+AGG | 0.527805 | 3.4:-70384089 | None:intergenic |
| GCTTCATGGATCTGGTTCGC+GGG | 0.535795 | 3.4:+70386508 | MS.gene031958:intron |
| AAGACCAGACTACCTGGAAT+CGG | 0.536235 | 3.4:-70384446 | None:intergenic |
| TCCACTCGTAAAAGAGGCAA+GGG | 0.536949 | 3.4:-70385723 | None:intergenic |
| CTTCAGCCTCTATTGAGTTG+AGG | 0.539160 | 3.4:+70384083 | MS.gene031958:CDS |
| AGAGACAAAACAAATACAAA+GGG | 0.540690 | 3.4:-70385911 | None:intergenic |
| AAGCCTTTGGTTAAGATGTG+TGG | 0.545538 | 3.4:+70386180 | MS.gene031958:CDS |
| GGCTCCCATCAGCATTTGCA+TGG | 0.555209 | 3.4:-70386577 | None:intergenic |
| CTACTGACATCCACTCCTCC+AGG | 0.559568 | 3.4:-70386890 | None:intergenic |
| GTTCTCCATGCAAATGCTGA+TGG | 0.559769 | 3.4:+70386572 | MS.gene031958:CDS |
| AAATTAGAAGCAAATATGGT+TGG | 0.569037 | 3.4:+70386810 | MS.gene031958:CDS |
| TTCCACTCGTAAAAGAGGCA+AGG | 0.570721 | 3.4:-70385724 | None:intergenic |
| GCTTTGTCTAGTTTCAAACC+TGG | 0.571403 | 3.4:+70386872 | MS.gene031958:CDS |
| AGCTAAAGATGCTGCTATGG+CGG | 0.574498 | 3.4:+70386212 | MS.gene031958:CDS |
| TAGTTTCAAACCTGGAGGAG+TGG | 0.576662 | 3.4:+70386880 | MS.gene031958:CDS |
| AAGCTAATGCTTGATTTCCA+TGG | 0.577394 | 3.4:+70384007 | None:intergenic |
| TTTGTGCAGGTTCAACAACT+GGG | 0.577919 | 3.4:+70384384 | MS.gene031958:intron |
| AAGAGACAAAACAAATACAA+AGG | 0.580070 | 3.4:-70385912 | None:intergenic |
| GATTGTGGAGCAGAGCCTGT+TGG | 0.580954 | 3.4:+70386333 | MS.gene031958:CDS |
| GTTCGGATATGGTGGATTCG+TGG | 0.582221 | 3.4:+70385690 | MS.gene031958:CDS |
| ATGGTTGGCTCTTGGCAGGA+GGG | 0.589722 | 3.4:+70386825 | MS.gene031958:CDS |
| TATCTTAACAGACACTCTCA+GGG | 0.594360 | 3.4:-70385754 | None:intergenic |
| GTGAAGCCAATTTGTCACCA+TGG | 0.595385 | 3.4:-70384024 | None:intergenic |
| AGAATGTACTGCATCCATGA+AGG | 0.601091 | 3.4:-70386963 | None:intergenic |
| TGCATCAGATGGCATTCAGA+AGG | 0.604378 | 3.4:+70386922 | MS.gene031958:CDS |
| TATGGTTGGCTCTTGGCAGG+AGG | 0.607292 | 3.4:+70386824 | MS.gene031958:CDS |
| TTCTCCATGCAAATGCTGAT+GGG | 0.608881 | 3.4:+70386573 | MS.gene031958:CDS |
| GTTCTGGTAGATAGTGCAAA+GGG | 0.610316 | 3.4:+70386644 | MS.gene031958:CDS |
| AGCGGCATATGTGCATCAGA+TGG | 0.611930 | 3.4:+70386911 | MS.gene031958:CDS |
| TTGTCTAGTTTCAAACCTGG+AGG | 0.627471 | 3.4:+70386875 | MS.gene031958:CDS |
| GGTTCTGGTAGATAGTGCAA+AGG | 0.632272 | 3.4:+70386643 | MS.gene031958:CDS |
| CAAGGAGTACAAATTGGGGA+GGG | 0.634974 | 3.4:-70385936 | None:intergenic |
| ACTTTATTGGAATGATCGTG+TGG | 0.636931 | 3.4:+70386250 | MS.gene031958:CDS |
| ACAAGGAGTACAAATTGGGG+AGG | 0.638971 | 3.4:-70385937 | None:intergenic |
| ATGCCACACATCTTAACCAA+AGG | 0.642355 | 3.4:-70386183 | None:intergenic |
| TTAACCACCAAAATCATACA+AGG | 0.643616 | 3.4:-70385954 | None:intergenic |
| ACCAGAACCCAATCAACTAG+AGG | 0.654201 | 3.4:-70386629 | None:intergenic |
| CATACAAGGAGTACAAATTG+GGG | 0.657722 | 3.4:-70385940 | None:intergenic |
| CAATCCTGAGAATGTTCGTG+AGG | 0.659098 | 3.4:+70386850 | MS.gene031958:CDS |
| CCACTCGTAAAAGAGGCAAG+GGG | 0.668551 | 3.4:-70385722 | None:intergenic |
| GGAGGAGTGGATGTCAGTAG+CGG | 0.679932 | 3.4:+70386893 | MS.gene031958:CDS |
| CACTCGTAAAAGAGGCAAGG+GGG | 0.687217 | 3.4:-70385721 | None:intergenic |
| CTGGTAGATAGTGCAAAGGG+TGG | 0.687302 | 3.4:+70386647 | MS.gene031958:CDS |
| AGTGTCTGTTAAGATAGCTG+GGG | 0.723904 | 3.4:+70385761 | MS.gene031958:CDS |
| ATCTTAACAGACACTCTCAG+GGG | 0.731126 | 3.4:-70385753 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ACTAAAAAAAAAAGATTGTT+TGG | - | chr3.4:70386715-70386734 | None:intergenic | 15.0% |
| !! | GATTTAAATATAATTTCTGT+AGG | + | chr3.4:70386039-70386058 | MS.gene031958:intron | 15.0% |
| !!! | AATTTTTGGTAATTTAAACT+GGG | - | chr3.4:70386795-70386814 | None:intergenic | 15.0% |
| !!! | TAATTTTTGGTAATTTAAAC+TGG | - | chr3.4:70386796-70386815 | None:intergenic | 15.0% |
| !! | AATTTCTAACTAATTCTTCT+AGG | + | chr3.4:70384219-70384238 | MS.gene031958:intron | 20.0% |
| !! | CATTTAATAAAAAACCAATC+CGG | - | chr3.4:70385328-70385347 | None:intergenic | 20.0% |
| !! | TCTATAAAAGTTGTTTGATT+GGG | + | chr3.4:70384802-70384821 | MS.gene031958:intron | 20.0% |
| !! | TTCTATAAAAGTTGTTTGAT+TGG | + | chr3.4:70384801-70384820 | MS.gene031958:intron | 20.0% |
| !! | TTCTTTAAACTTTCAATCAA+AGG | - | chr3.4:70384954-70384973 | None:intergenic | 20.0% |
| !!! | AAGTTCTTTTTTGTAAATAC+GGG | + | chr3.4:70385300-70385319 | MS.gene031958:intron | 20.0% |
| !!! | GAAGTTCTTTTTTGTAAATA+CGG | + | chr3.4:70385299-70385318 | MS.gene031958:intron | 20.0% |
| ! | AAAAAAGAGAGGTAGAAAAT+AGG | - | chr3.4:70385056-70385075 | None:intergenic | 25.0% |
| ! | AAAACAAATTTCGAAGTACA+AGG | + | chr3.4:70386004-70386023 | MS.gene031958:intron | 25.0% |
| ! | AAATGTTTCATGTTCATCAA+AGG | + | chr3.4:70386143-70386162 | MS.gene031958:CDS | 25.0% |
| ! | AAATTAGAAGCAAATATGGT+TGG | + | chr3.4:70386810-70386829 | MS.gene031958:CDS | 25.0% |
| ! | AACTTTATGAATTGTAGAGA+GGG | + | chr3.4:70384861-70384880 | MS.gene031958:intron | 25.0% |
| ! | AAGAGACAAAACAAATACAA+AGG | - | chr3.4:70385915-70385934 | None:intergenic | 25.0% |
| ! | AGAGACAAAACAAATACAAA+GGG | - | chr3.4:70385914-70385933 | None:intergenic | 25.0% |
| ! | ATAATTTCTGTAGGTTTGAA+AGG | + | chr3.4:70386048-70386067 | MS.gene031958:intron | 25.0% |
| ! | CCAAAAATTAGAAGCAAATA+TGG | + | chr3.4:70386806-70386825 | MS.gene031958:CDS | 25.0% |
| ! | CTATAAAAGTTGTTTGATTG+GGG | + | chr3.4:70384803-70384822 | MS.gene031958:intron | 25.0% |
| ! | TCTTGATTAGGATATCTTTA+TGG | - | chr3.4:70384125-70384144 | None:intergenic | 25.0% |
| !! | AGAGATTAGTTAATGCATTT+AGG | - | chr3.4:70384261-70384280 | None:intergenic | 25.0% |
| !! | CCATATTTGCTTCTAATTTT+TGG | - | chr3.4:70386809-70386828 | None:intergenic | 25.0% |
| !!! | CAATTTTCTAGCATAAGATT+CGG | + | chr3.4:70386081-70386100 | MS.gene031958:CDS | 25.0% |
| !!! | TATATTGTTTGAAAGCATCA+TGG | + | chr3.4:70384570-70384589 | MS.gene031958:intron | 25.0% |
| AAAGAAGAAGCTAAACTCTT+GGG | + | chr3.4:70384968-70384987 | MS.gene031958:intron | 30.0% | |
| AATAGGAATTGCATTCAACA+CGG | - | chr3.4:70385039-70385058 | None:intergenic | 30.0% | |
| ACTTGAAATGATTAAGCCTT+TGG | + | chr3.4:70386167-70386186 | MS.gene031958:CDS | 30.0% | |
| AGTTTAGTGGAGAATCTTAT+GGG | + | chr3.4:70385647-70385666 | MS.gene031958:intron | 30.0% | |
| ATTCAACGAGAATTTCTATG+GGG | + | chr3.4:70385113-70385132 | MS.gene031958:intron | 30.0% | |
| CAACTTTATGAATTGTAGAG+AGG | + | chr3.4:70384860-70384879 | MS.gene031958:intron | 30.0% | |
| CACAAGAACAATAATGTACA+TGG | - | chr3.4:70384342-70384361 | None:intergenic | 30.0% | |
| CATCAGGAATTGTGTTTAAA+AGG | - | chr3.4:70386601-70386620 | None:intergenic | 30.0% | |
| GATTCAACGAGAATTTCTAT+GGG | + | chr3.4:70385112-70385131 | MS.gene031958:intron | 30.0% | |
| TAAAGAAGAAGCTAAACTCT+TGG | + | chr3.4:70384967-70384986 | MS.gene031958:intron | 30.0% | |
| TAAATGCGTATGCAAATTTG+TGG | + | chr3.4:70385342-70385361 | MS.gene031958:intron | 30.0% | |
| TAGAGTCCATAAAATATCGA+CGG | - | chr3.4:70384733-70384752 | None:intergenic | 30.0% | |
| TAGTTAATGCATTTAGGAGT+CGG | - | chr3.4:70384255-70384274 | None:intergenic | 30.0% | |
| TGACATTGAAATCTTGAGTT+TGG | + | chr3.4:70386477-70386496 | MS.gene031958:intron | 30.0% | |
| TGAGGCTTTCATTTAAATAG+TGG | - | chr3.4:70384621-70384640 | None:intergenic | 30.0% | |
| TTAAATGAAAGCCTCATGAA+GGG | + | chr3.4:70384625-70384644 | MS.gene031958:intron | 30.0% | |
| TTAACCACCAAAATCATACA+AGG | - | chr3.4:70385957-70385976 | None:intergenic | 30.0% | |
| TTAGAAATTGAGAAGAGTCT+CGG | - | chr3.4:70385530-70385549 | None:intergenic | 30.0% | |
| TTGCAAGAAACTTCATACTT+TGG | - | chr3.4:70386108-70386127 | None:intergenic | 30.0% | |
| TTTAAATGAAAGCCTCATGA+AGG | + | chr3.4:70384624-70384643 | MS.gene031958:intron | 30.0% | |
| ! | AAAAGAAAACCTAACTTGCA+AGG | - | chr3.4:70384366-70384385 | None:intergenic | 30.0% |
| ! | ATCATACAAGGAGTACAAAT+TGG | - | chr3.4:70385945-70385964 | None:intergenic | 30.0% |
| ! | CGATATTTTATGGACTCTAA+AGG | + | chr3.4:70384734-70384753 | MS.gene031958:intron | 30.0% |
| ! | GATTTTCCTGAATCAAAGAT+GGG | - | chr3.4:70386541-70386560 | None:intergenic | 30.0% |
| ! | TCATACAAGGAGTACAAATT+GGG | - | chr3.4:70385944-70385963 | None:intergenic | 30.0% |
| ! | TTGTACTCCTTGTATGATTT+TGG | + | chr3.4:70385947-70385966 | MS.gene031958:CDS | 30.0% |
| !! | TTTTGGTTAGATCATTGGAT+GGG | + | chr3.4:70385479-70385498 | MS.gene031958:intron | 30.0% |
| AACAAATATGTGAGTCTAGG+AGG | + | chr3.4:70384993-70385012 | MS.gene031958:intron | 35.0% | |
| AACCAAAAAGACGCTTTAGT+GGG | + | chr3.4:70385548-70385567 | MS.gene031958:intron | 35.0% | |
| AAGAAGAAGCTAAACTCTTG+GGG | + | chr3.4:70384969-70384988 | MS.gene031958:intron | 35.0% | |
| AATCTTATGGGGGATTTAGA+GGG | + | chr3.4:70385659-70385678 | MS.gene031958:intron | 35.0% | |
| ACTTTATTGGAATGATCGTG+TGG | + | chr3.4:70386250-70386269 | MS.gene031958:CDS | 35.0% | |
| AGAGAAGAAGAGAGAATTTG+TGG | + | chr3.4:70384142-70384161 | MS.gene031958:intron | 35.0% | |
| AGAGGAAATAAGCATCAATG+CGG | + | chr3.4:70384651-70384670 | MS.gene031958:intron | 35.0% | |
| ATCAAATCTTGAGTTTGTGC+AGG | + | chr3.4:70386404-70386423 | MS.gene031958:CDS | 35.0% | |
| ATCAAGAATAGCTTCCTTCA+TGG | + | chr3.4:70386949-70386968 | MS.gene031958:CDS | 35.0% | |
| CATGAAACTAAACCTACATG+AGG | - | chr3.4:70384542-70384561 | None:intergenic | 35.0% | |
| CGTTGAACATGCATAAAAGT+CGG | - | chr3.4:70386441-70386460 | None:intergenic | 35.0% | |
| GAGTTTAGTGGAGAATCTTA+TGG | + | chr3.4:70385646-70385665 | MS.gene031958:intron | 35.0% | |
| GCAATGTTTACCAAGCAAAT+TGG | - | chr3.4:70384172-70384191 | None:intergenic | 35.0% | |
| GGATTCAACGAGAATTTCTA+TGG | + | chr3.4:70385111-70385130 | MS.gene031958:intron | 35.0% | |
| GTTGAACATGCATAAAAGTC+GGG | - | chr3.4:70386440-70386459 | None:intergenic | 35.0% | |
| GTTTAGTGGAGAATCTTATG+GGG | + | chr3.4:70385648-70385667 | MS.gene031958:intron | 35.0% | |
| TAAATAAAGACCAGACTACC+TGG | - | chr3.4:70384455-70384474 | None:intergenic | 35.0% | |
| TAACCAAAAAGACGCTTTAG+TGG | + | chr3.4:70385547-70385566 | MS.gene031958:intron | 35.0% | |
| TATCTTAACAGACACTCTCA+GGG | - | chr3.4:70385757-70385776 | None:intergenic | 35.0% | |
| TCAAAAGTTGCAAGAGATTG+TGG | + | chr3.4:70386318-70386337 | MS.gene031958:CDS | 35.0% | |
| TCCAATGATCTAACCAAAAC+CGG | - | chr3.4:70385478-70385497 | None:intergenic | 35.0% | |
| TCTCGGATAAGAAACACAAA+GGG | - | chr3.4:70385513-70385532 | None:intergenic | 35.0% | |
| TCTCTCCCGTTTAAGTATTT+GGG | + | chr3.4:70384885-70384904 | MS.gene031958:intron | 35.0% | |
| TCTCTCTTCTTCTCTTGATT+AGG | - | chr3.4:70384137-70384156 | None:intergenic | 35.0% | |
| TGATTTCCATGGTGACAAAT+TGG | + | chr3.4:70384018-70384037 | MS.gene031958:CDS | 35.0% | |
| TGTTTCACTTTCTGTTGCAA+AGG | + | chr3.4:70386290-70386309 | MS.gene031958:CDS | 35.0% | |
| TGTTTGATTGGGGTTAATGT+TGG | + | chr3.4:70384813-70384832 | MS.gene031958:intron | 35.0% | |
| TTCAACGACAGTTAAATGCT+TGG | + | chr3.4:70386454-70386473 | MS.gene031958:intron | 35.0% | |
| TTCTTGCAAACATACTGAGT+TGG | + | chr3.4:70386119-70386138 | MS.gene031958:CDS | 35.0% | |
| TTGTTAGGTAAAGTGGAAGA+CGG | + | chr3.4:70385160-70385179 | MS.gene031958:intron | 35.0% | |
| TTTAGTGGAGAATCTTATGG+GGG | + | chr3.4:70385649-70385668 | MS.gene031958:intron | 35.0% | |
| TTTGGACAAGAATGAGATTG+AGG | + | chr3.4:70384051-70384070 | MS.gene031958:CDS | 35.0% | |
| TTTGGGAGTTAGAGATGTTA+GGG | + | chr3.4:70385208-70385227 | MS.gene031958:intron | 35.0% | |
| ! | AAAGTGTCCTCTAGTTGATT+GGG | + | chr3.4:70386622-70386641 | MS.gene031958:CDS | 35.0% |
| ! | CAAATTGGCTTCACTGAATT+TGG | + | chr3.4:70384033-70384052 | MS.gene031958:CDS | 35.0% |
| ! | CATACAAGGAGTACAAATTG+GGG | - | chr3.4:70385943-70385962 | None:intergenic | 35.0% |
| ! | CGATTTTCCTGAATCAAAGA+TGG | - | chr3.4:70386542-70386561 | None:intergenic | 35.0% |
| ! | GTGCTTGCATTTCTGTTTTA+GGG | + | chr3.4:70385872-70385891 | MS.gene031958:intron | 35.0% |
| ! | GTTAGGTTTTCTTTTTGTGC+AGG | + | chr3.4:70384371-70384390 | MS.gene031958:intron | 35.0% |
| ! | TACTCCTTGTATGATTTTGG+TGG | + | chr3.4:70385950-70385969 | MS.gene031958:CDS | 35.0% |
| ! | TGTGCTTGCATTTCTGTTTT+AGG | + | chr3.4:70385871-70385890 | MS.gene031958:intron | 35.0% |
| ! | TGTTTTCTGTCTTCAGATGT+AGG | + | chr3.4:70385811-70385830 | MS.gene031958:intron | 35.0% |
| ! | TTGTGGTAAACCAATTTGCT+TGG | + | chr3.4:70384159-70384178 | MS.gene031958:intron | 35.0% |
| !! | AAAAGTGTCCTCTAGTTGAT+TGG | + | chr3.4:70386621-70386640 | MS.gene031958:CDS | 35.0% |
| !! | AGAAGGTTTGTTAGGTAAAG+TGG | + | chr3.4:70385153-70385172 | MS.gene031958:intron | 35.0% |
| !! | TCCGATACAAAGAGTATCAT+CGG | - | chr3.4:70384703-70384722 | None:intergenic | 35.0% |
| !! | TTTGAAAGCATCATGGATCT+AGG | + | chr3.4:70384577-70384596 | MS.gene031958:intron | 35.0% |
| !!! | CCTCTCTTTTTTCAAAATGC+CGG | + | chr3.4:70385064-70385083 | MS.gene031958:intron | 35.0% |
| !!! | GAAACAGAACGTTTTGAGTT+TGG | - | chr3.4:70386276-70386295 | None:intergenic | 35.0% |
| !!! | GTTTTGGTTAGATCATTGGA+TGG | + | chr3.4:70385478-70385497 | MS.gene031958:intron | 35.0% |
| !!! | TTTTTTGTAAATACGGGAGC+CGG | + | chr3.4:70385306-70385325 | MS.gene031958:intron | 35.0% |
| AAATAAGCATCAATGCGGGT+TGG | + | chr3.4:70384656-70384675 | MS.gene031958:intron | 40.0% | |
| AAGCCTTTGGTTAAGATGTG+TGG | + | chr3.4:70386180-70386199 | MS.gene031958:CDS | 40.0% | |
| AAGTGTGGAAGAGAATTGTG+AGG | + | chr3.4:70385090-70385109 | MS.gene031958:intron | 40.0% | |
| AATATGTGAGTCTAGGAGGA+AGG | + | chr3.4:70384997-70385016 | MS.gene031958:intron | 40.0% | |
| AGAATGTACTGCATCCATGA+AGG | - | chr3.4:70386966-70386985 | None:intergenic | 40.0% | |
| AGATCATTGGATGGGAAATG+CGG | + | chr3.4:70385487-70385506 | MS.gene031958:intron | 40.0% | |
| AGCTTTCCCATCTTTGATTC+AGG | + | chr3.4:70386532-70386551 | MS.gene031958:CDS | 40.0% | |
| AGTGTCTGTTAAGATAGCTG+GGG | + | chr3.4:70385761-70385780 | MS.gene031958:CDS | 40.0% | |
| ATCAGCTAAAGATGCTGCTA+TGG | + | chr3.4:70386209-70386228 | MS.gene031958:CDS | 40.0% | |
| ATCTTAACAGACACTCTCAG+GGG | - | chr3.4:70385756-70385775 | None:intergenic | 40.0% | |
| ATCTTATGGGGGATTTAGAG+GGG | + | chr3.4:70385660-70385679 | MS.gene031958:intron | 40.0% | |
| ATGCCACACATCTTAACCAA+AGG | - | chr3.4:70386186-70386205 | None:intergenic | 40.0% | |
| ATTCTCTTCCACACTTTCAC+CGG | - | chr3.4:70385086-70385105 | None:intergenic | 40.0% | |
| CCAAGTAGCTACATGAATTG+TGG | - | chr3.4:70384292-70384311 | None:intergenic | 40.0% | |
| CCAATGATCTAACCAAAACC+GGG | - | chr3.4:70385477-70385496 | None:intergenic | 40.0% | |
| CCACAATTCATGTAGCTACT+TGG | + | chr3.4:70384289-70384308 | MS.gene031958:intron | 40.0% | |
| CTATCTTAACAGACACTCTC+AGG | - | chr3.4:70385758-70385777 | None:intergenic | 40.0% | |
| CTCATGAGATGTATTTGCAG+TGG | + | chr3.4:70386752-70386771 | MS.gene031958:intron | 40.0% | |
| CTCTCCCGTTTAAGTATTTG+GGG | + | chr3.4:70384886-70384905 | MS.gene031958:intron | 40.0% | |
| CTCTCTCCCGTTTAAGTATT+TGG | + | chr3.4:70384884-70384903 | MS.gene031958:intron | 40.0% | |
| GAAGCTGGAGCAAACTTTAT+TGG | + | chr3.4:70386237-70386256 | MS.gene031958:CDS | 40.0% | |
| GAATCTTATGGGGGATTTAG+AGG | + | chr3.4:70385658-70385677 | MS.gene031958:intron | 40.0% | |
| GAGGAAATAAGCATCAATGC+GGG | + | chr3.4:70384652-70384671 | MS.gene031958:intron | 40.0% | |
| GAGTGTCTGTTAAGATAGCT+GGG | + | chr3.4:70385760-70385779 | MS.gene031958:CDS | 40.0% | |
| GATTGGGGTTAATGTTGGAA+GGG | + | chr3.4:70384818-70384837 | MS.gene031958:intron | 40.0% | |
| GCACTTGGAATCTTATATGG+AGG | + | chr3.4:70385600-70385619 | MS.gene031958:intron | 40.0% | |
| GCCGATGATACTCTTTGTAT+CGG | + | chr3.4:70384699-70384718 | MS.gene031958:intron | 40.0% | |
| GGCAACAAATATGTGAGTCT+AGG | + | chr3.4:70384990-70385009 | MS.gene031958:intron | 40.0% | |
| GGTAGCCCCAAATACTTAAA+CGG | - | chr3.4:70384894-70384913 | None:intergenic | 40.0% | |
| GTAGCCCCAAATACTTAAAC+GGG | - | chr3.4:70384893-70384912 | None:intergenic | 40.0% | |
| GTCTCGGATAAGAAACACAA+AGG | - | chr3.4:70385514-70385533 | None:intergenic | 40.0% | |
| GTTCTGGTAGATAGTGCAAA+GGG | + | chr3.4:70386644-70386663 | MS.gene031958:CDS | 40.0% | |
| GTTTGGGAGTTAGAGATGTT+AGG | + | chr3.4:70385207-70385226 | MS.gene031958:intron | 40.0% | |
| TCATCCACAAATACTCCAAC+AGG | - | chr3.4:70386351-70386370 | None:intergenic | 40.0% | |
| TCCAATTCCACTCGTAAAAG+AGG | - | chr3.4:70385732-70385751 | None:intergenic | 40.0% | |
| TGAGTATATTGTCTCGCTTC+TGG | + | chr3.4:70384476-70384495 | MS.gene031958:intron | 40.0% | |
| TGATACTCTTTGTATCGGAG+AGG | + | chr3.4:70384704-70384723 | MS.gene031958:intron | 40.0% | |
| TGATTGGGGTTAATGTTGGA+AGG | + | chr3.4:70384817-70384836 | MS.gene031958:intron | 40.0% | |
| TTCAACAACTGGGAGTTACT+TGG | + | chr3.4:70384394-70384413 | MS.gene031958:CDS | 40.0% | |
| TTCTCCATGCAAATGCTGAT+GGG | + | chr3.4:70386573-70386592 | MS.gene031958:CDS | 40.0% | |
| TTCTTGTGACCTTGCAAGTT+AGG | + | chr3.4:70384354-70384373 | MS.gene031958:intron | 40.0% | |
| TTGGATGTGGTAACTTTGGA+AGG | + | chr3.4:70385389-70385408 | MS.gene031958:intron | 40.0% | |
| TTTGTGCAGGTTCAACAACT+GGG | + | chr3.4:70384384-70384403 | MS.gene031958:intron | 40.0% | |
| ! | AAGCAAATATGGTTGGCTCT+TGG | + | chr3.4:70386817-70386836 | MS.gene031958:CDS | 40.0% |
| ! | ACTAGAGGACACTTTTCATC+AGG | - | chr3.4:70386617-70386636 | None:intergenic | 40.0% |
| ! | AGAGTGTCTGTTAAGATAGC+TGG | + | chr3.4:70385759-70385778 | MS.gene031958:CDS | 40.0% |
| ! | AGGCATCCGTCGATATTTTA+TGG | + | chr3.4:70384724-70384743 | MS.gene031958:intron | 40.0% |
| ! | GAAGCACTTATTCCTCATGT+AGG | + | chr3.4:70384527-70384546 | MS.gene031958:intron | 40.0% |
| ! | GAGGCACTTGGAATCTTATA+TGG | + | chr3.4:70385597-70385616 | MS.gene031958:intron | 40.0% |
| ! | GCTTTGTCTAGTTTCAAACC+TGG | + | chr3.4:70386872-70386891 | MS.gene031958:CDS | 40.0% |
| ! | GGGTGCGAATTGGTTTAATA+CGG | + | chr3.4:70385418-70385437 | MS.gene031958:intron | 40.0% |
| ! | TGCGAATTGGTTTAATACGG+AGG | + | chr3.4:70385421-70385440 | MS.gene031958:intron | 40.0% |
| ! | TTGTCTAGTTTCAAACCTGG+AGG | + | chr3.4:70386875-70386894 | MS.gene031958:CDS | 40.0% |
| ! | TTTAGGGTCACTGGTATATC+AGG | + | chr3.4:70385888-70385907 | MS.gene031958:intron | 40.0% |
| ! | TTTTGTGCAGGTTCAACAAC+TGG | + | chr3.4:70384383-70384402 | MS.gene031958:intron | 40.0% |
| !! | ATATGGTGGATTCGTGGAAT+TGG | + | chr3.4:70385696-70385715 | MS.gene031958:CDS | 40.0% |
| !! | CCGGCATTTTGAAAAAAGAG+AGG | - | chr3.4:70385067-70385086 | None:intergenic | 40.0% |
| !! | TTCAGCCTCTATTGAGTTGA+GGG | + | chr3.4:70384084-70384103 | MS.gene031958:CDS | 40.0% |
| !! | TTTAGTGGGTGATCTTTTGG+AGG | + | chr3.4:70385562-70385581 | MS.gene031958:intron | 40.0% |
| !!! | CATTTCTGTTTTAGGGTCAC+TGG | + | chr3.4:70385879-70385898 | MS.gene031958:intron | 40.0% |
| !!! | GTTGCTTAGAGGTTTTGAGA+TGG | + | chr3.4:70384758-70384777 | MS.gene031958:intron | 40.0% |
| !!! | TAGAGGTTTTGAGATGGTGT+CGG | + | chr3.4:70384764-70384783 | MS.gene031958:intron | 40.0% |
| AAAGCCTCACGAACATTCTC+AGG | - | chr3.4:70386857-70386876 | None:intergenic | 45.0% | |
| AAGACCAGACTACCTGGAAT+CGG | - | chr3.4:70384449-70384468 | None:intergenic | 45.0% | |
| ACAATGCAGCTTCATGGATC+TGG | + | chr3.4:70386500-70386519 | MS.gene031958:intron | 45.0% | |
| ACCAGAACCCAATCAACTAG+AGG | - | chr3.4:70386632-70386651 | None:intergenic | 45.0% | |
| ACGAGAATTTCTATGGGGAG+CGG | + | chr3.4:70385118-70385137 | MS.gene031958:intron | 45.0% | |
| AGCTAAAGATGCTGCTATGG+CGG | + | chr3.4:70386212-70386231 | MS.gene031958:CDS | 45.0% | |
| ATCCGAAGAAGATGGGTACT+TGG | + | chr3.4:70384925-70384944 | MS.gene031958:intron | 45.0% | |
| CAATCCTGAGAATGTTCGTG+AGG | + | chr3.4:70386850-70386869 | MS.gene031958:CDS | 45.0% | |
| GAGTATCATCGGCGTATTGA+AGG | - | chr3.4:70384692-70384711 | None:intergenic | 45.0% | |
| GGTTTAATACGGAGGTTGTG+CGG | + | chr3.4:70385429-70385448 | MS.gene031958:intron | 45.0% | |
| GTGAAGCCAATTTGTCACCA+TGG | - | chr3.4:70384027-70384046 | None:intergenic | 45.0% | |
| GTGGTTGGATGTGGTAACTT+TGG | + | chr3.4:70385385-70385404 | MS.gene031958:intron | 45.0% | |
| GTTCTCCATGCAAATGCTGA+TGG | + | chr3.4:70386572-70386591 | MS.gene031958:CDS | 45.0% | |
| GTTTGGACAATGCAGCTTCA+TGG | + | chr3.4:70386494-70386513 | MS.gene031958:intron | 45.0% | |
| TAGTTTCAAACCTGGAGGAG+TGG | + | chr3.4:70386880-70386899 | MS.gene031958:CDS | 45.0% | |
| TCAAAATGCCGGTGAAAGTG+TGG | + | chr3.4:70385075-70385094 | MS.gene031958:intron | 45.0% | |
| TCAGACCCTCAACTCAATAG+AGG | - | chr3.4:70384092-70384111 | None:intergenic | 45.0% | |
| TCCACTCGTAAAAGAGGCAA+GGG | - | chr3.4:70385726-70385745 | None:intergenic | 45.0% | |
| TCCCAAGTACCCATCTTCTT+CGG | - | chr3.4:70384930-70384949 | None:intergenic | 45.0% | |
| TCCGAAGAAGATGGGTACTT+GGG | + | chr3.4:70384926-70384945 | MS.gene031958:intron | 45.0% | |
| TCCTCTAGTTGATTGGGTTC+TGG | + | chr3.4:70386628-70386647 | MS.gene031958:CDS | 45.0% | |
| TCCTTCCAAAGTGAATGCTC+CGG | - | chr3.4:70385281-70385300 | None:intergenic | 45.0% | |
| TGCATCAGATGGCATTCAGA+AGG | + | chr3.4:70386922-70386941 | MS.gene031958:CDS | 45.0% | |
| TGGAAGGGAGTTCATAGAGA+TGG | + | chr3.4:70384833-70384852 | MS.gene031958:intron | 45.0% | |
| TGGGAAATGGGATGAATACC+CGG | + | chr3.4:70385456-70385475 | MS.gene031958:intron | 45.0% | |
| TTCCACTCGTAAAAGAGGCA+AGG | - | chr3.4:70385727-70385746 | None:intergenic | 45.0% | |
| TTTCCTCTCATCCCTTCATG+AGG | - | chr3.4:70384639-70384658 | None:intergenic | 45.0% | |
| ! | AAATATGGTTGGCTCTTGGC+AGG | + | chr3.4:70386821-70386840 | MS.gene031958:CDS | 45.0% |
| ! | AAGTATTTGGGGCTACCGAT+GGG | + | chr3.4:70384897-70384916 | MS.gene031958:intron | 45.0% |
| ! | ACAAGGAGTACAAATTGGGG+AGG | - | chr3.4:70385940-70385959 | None:intergenic | 45.0% |
| ! | AGAGCCTGTTGGAGTATTTG+TGG | + | chr3.4:70386344-70386363 | MS.gene031958:CDS | 45.0% |
| ! | ATGGGATGAATACCCGGTTT+TGG | + | chr3.4:70385462-70385481 | MS.gene031958:intron | 45.0% |
| ! | CAAGGAGTACAAATTGGGGA+GGG | - | chr3.4:70385939-70385958 | None:intergenic | 45.0% |
| ! | CAGTGGTGAAGCATTCGATT+GGG | + | chr3.4:70386769-70386788 | MS.gene031958:intron | 45.0% |
| ! | CGGTCTTTTGTGGAAGTTTG+TGG | - | chr3.4:70384429-70384448 | None:intergenic | 45.0% |
| ! | CTTCAGCCTCTATTGAGTTG+AGG | + | chr3.4:70384083-70384102 | MS.gene031958:CDS | 45.0% |
| ! | GCCTCTTTTACGAGTGGAAT+TGG | + | chr3.4:70385728-70385747 | MS.gene031958:CDS | 45.0% |
| ! | GGGAGGAAAGAAGGTTTGTT+AGG | + | chr3.4:70385145-70385164 | MS.gene031958:intron | 45.0% |
| ! | GGTTCTGGTAGATAGTGCAA+AGG | + | chr3.4:70386643-70386662 | MS.gene031958:CDS | 45.0% |
| ! | TAAGTATTTGGGGCTACCGA+TGG | + | chr3.4:70384896-70384915 | MS.gene031958:intron | 45.0% |
| ! | TACAACCGGAGCATTCACTT+TGG | + | chr3.4:70385273-70385292 | MS.gene031958:intron | 45.0% |
| ! | TACCTGGAATCGGTCTTTTG+TGG | - | chr3.4:70384439-70384458 | None:intergenic | 45.0% |
| ! | TGTGGTAACTTTGGAAGGAG+TGG | + | chr3.4:70385394-70385413 | MS.gene031958:intron | 45.0% |
| ! | TTCCACAAAAGACCGATTCC+AGG | + | chr3.4:70384434-70384453 | MS.gene031958:CDS | 45.0% |
| !! | ACTCTAAAGGCGTTGCTTAG+AGG | + | chr3.4:70384747-70384766 | MS.gene031958:intron | 45.0% |
| !! | CACCCACTAAAGCGTCTTTT+TGG | - | chr3.4:70385553-70385572 | None:intergenic | 45.0% |
| !! | CGCTTTAGTGGGTGATCTTT+TGG | + | chr3.4:70385559-70385578 | MS.gene031958:intron | 45.0% |
| !!! | AGAGGTTTTGAGATGGTGTC+GGG | + | chr3.4:70384765-70384784 | MS.gene031958:intron | 45.0% |
| !!! | CCCGGTTTTGGTTAGATCAT+TGG | + | chr3.4:70385474-70385493 | MS.gene031958:intron | 45.0% |
| !!! | GGGCAGTTTTAGAGGTGTTT+TGG | + | chr3.4:70385781-70385800 | MS.gene031958:intron | 45.0% |
| AAGCCTCATGAAGGGATGAG+AGG | + | chr3.4:70384633-70384652 | MS.gene031958:intron | 50.0% | |
| ACTGCTTCTGTCATGACAGC+AGG | + | chr3.4:70385835-70385854 | MS.gene031958:intron | 50.0% | |
| AGCGGCATATGTGCATCAGA+TGG | + | chr3.4:70386911-70386930 | MS.gene031958:CDS | 50.0% | |
| ATGTGAGTCGTTTGGCGAAG+TGG | + | chr3.4:70385237-70385256 | MS.gene031958:intron | 50.0% | |
| ATTCCAAGTGCCTCCTCCTA+CGG | - | chr3.4:70385591-70385610 | None:intergenic | 50.0% | |
| ATTTCTATGGGGAGCGGTGA+AGG | + | chr3.4:70385124-70385143 | MS.gene031958:intron | 50.0% | |
| CACTCGTAAAAGAGGCAAGG+GGG | - | chr3.4:70385724-70385743 | None:intergenic | 50.0% | |
| CCACTCGTAAAAGAGGCAAG+GGG | - | chr3.4:70385725-70385744 | None:intergenic | 50.0% | |
| CGTGTGGGAAGAGAGTTTAG+TGG | + | chr3.4:70385634-70385653 | MS.gene031958:intron | 50.0% | |
| CTCCCAAACCTCCTAAAGAC+CGG | - | chr3.4:70385196-70385215 | None:intergenic | 50.0% | |
| CTGCTTCTGTCATGACAGCA+GGG | + | chr3.4:70385836-70385855 | MS.gene031958:intron | 50.0% | |
| CTGGTAGATAGTGCAAAGGG+TGG | + | chr3.4:70386647-70386666 | MS.gene031958:CDS | 50.0% | |
| GAGGCGAAAACTGTTCGTGT+GGG | + | chr3.4:70385619-70385638 | MS.gene031958:intron | 50.0% | |
| GAGGTGGAGGCTAATACAAC+CGG | + | chr3.4:70385259-70385278 | MS.gene031958:intron | 50.0% | |
| GGAGCGAATCCGAAGAAGAT+GGG | + | chr3.4:70384918-70384937 | MS.gene031958:intron | 50.0% | |
| GGGAGTTAGAGATGTTAGGG+TGG | + | chr3.4:70385211-70385230 | MS.gene031958:intron | 50.0% | |
| GGTGGTGAATGTGAGTCGTT+TGG | + | chr3.4:70385229-70385248 | MS.gene031958:intron | 50.0% | |
| TAATACGGAGGTTGTGCGGA+AGG | + | chr3.4:70385433-70385452 | MS.gene031958:intron | 50.0% | |
| TAGATAGTGCAAAGGGTGGC+AGG | + | chr3.4:70386651-70386670 | MS.gene031958:CDS | 50.0% | |
| TATGGGGGATTTAGAGGGGT+GGG | + | chr3.4:70385664-70385683 | MS.gene031958:intron | 50.0% | |
| TCCCAAACCTCCTAAAGACC+GGG | - | chr3.4:70385195-70385214 | None:intergenic | 50.0% | |
| TGTAAATACGGGAGCCGGAT+TGG | + | chr3.4:70385311-70385330 | MS.gene031958:intron | 50.0% | |
| TGTGAGTCTAGGAGGAAGGA+TGG | + | chr3.4:70385001-70385020 | MS.gene031958:intron | 50.0% | |
| TTATGGGGGATTTAGAGGGG+TGG | + | chr3.4:70385663-70385682 | MS.gene031958:intron | 50.0% | |
| TTCTTCGGATTCGCTCCCAT+CGG | - | chr3.4:70384915-70384934 | None:intergenic | 50.0% | |
| TTGTGCGGAAGGTGGGAAAT+GGG | + | chr3.4:70385444-70385463 | MS.gene031958:intron | 50.0% | |
| TTTAGAGGGGTGGGTGTGTT+CGG | + | chr3.4:70385673-70385692 | MS.gene031958:intron | 50.0% | |
| TTTCTATGGGGAGCGGTGAA+GGG | + | chr3.4:70385125-70385144 | MS.gene031958:intron | 50.0% | |
| ! | AAGACCGATTCCAGGTAGTC+TGG | + | chr3.4:70384442-70384461 | MS.gene031958:intron | 50.0% |
| ! | ACCGGAGCATTCACTTTGGA+AGG | + | chr3.4:70385277-70385296 | MS.gene031958:intron | 50.0% |
| ! | AGCTTCATGGATCTGGTTCG+CGG | + | chr3.4:70386507-70386526 | MS.gene031958:intron | 50.0% |
| ! | GCAGTGGTGAAGCATTCGAT+TGG | + | chr3.4:70386768-70386787 | MS.gene031958:intron | 50.0% |
| ! | GGTAACTTTGGAAGGAGTGG+CGG | + | chr3.4:70385397-70385416 | MS.gene031958:intron | 50.0% |
| ! | GTAACTTTGGAAGGAGTGGC+GGG | + | chr3.4:70385398-70385417 | MS.gene031958:intron | 50.0% |
| ! | TGAGATGGTGTCGGGTTTGA+AGG | + | chr3.4:70384773-70384792 | MS.gene031958:intron | 50.0% |
| !! | GATAGCTGGGGCAGTTTTAG+AGG | + | chr3.4:70385773-70385792 | MS.gene031958:CDS | 50.0% |
| !! | GATCTTTTGGAGGCAACCGT+AGG | + | chr3.4:70385572-70385591 | MS.gene031958:intron | 50.0% |
| !! | GTTCGGATATGGTGGATTCG+TGG | + | chr3.4:70385690-70385709 | MS.gene031958:CDS | 50.0% |
| !! | TAAGCATCAATGCGGGTTGG+TGG | + | chr3.4:70384659-70384678 | MS.gene031958:intron | 50.0% |
| !! | TTTTGCTTCGAGGTGGTGGT+TGG | + | chr3.4:70385370-70385389 | MS.gene031958:intron | 50.0% |
| AGCGGTGAAGGGAGGAAAGA+AGG | + | chr3.4:70385136-70385155 | MS.gene031958:intron | 55.0% | |
| CACCACCTCGAAGCAAAAGC+TGG | - | chr3.4:70385368-70385387 | None:intergenic | 55.0% | |
| CCCAAACCTCCTAAAGACCG+GGG | - | chr3.4:70385194-70385213 | None:intergenic | 55.0% | |
| CTACTGACATCCACTCCTCC+AGG | - | chr3.4:70386893-70386912 | None:intergenic | 55.0% | |
| GATTGTGGAGCAGAGCCTGT+TGG | + | chr3.4:70386333-70386352 | MS.gene031958:CDS | 55.0% | |
| GGAGGAGTGGATGTCAGTAG+CGG | + | chr3.4:70386893-70386912 | MS.gene031958:CDS | 55.0% | |
| GGAGGCGAAAACTGTTCGTG+TGG | + | chr3.4:70385618-70385637 | MS.gene031958:intron | 55.0% | |
| GGCTCCCATCAGCATTTGCA+TGG | - | chr3.4:70386580-70386599 | None:intergenic | 55.0% | |
| GGGAGCGAATCCGAAGAAGA+TGG | + | chr3.4:70384917-70384936 | MS.gene031958:intron | 55.0% | |
| GTGGGTGTGTTCGGATATGG+TGG | + | chr3.4:70385682-70385701 | MS.gene031958:CDS | 55.0% | |
| GTGTGTCAACCCCGGTCTTT+AGG | + | chr3.4:70385182-70385201 | MS.gene031958:intron | 55.0% | |
| GTTGTGCGGAAGGTGGGAAA+TGG | + | chr3.4:70385443-70385462 | MS.gene031958:intron | 55.0% | |
| TGAGTCGTTTGGCGAAGTGG+AGG | + | chr3.4:70385240-70385259 | MS.gene031958:intron | 55.0% | |
| TGTCAACCCCGGTCTTTAGG+AGG | + | chr3.4:70385185-70385204 | MS.gene031958:intron | 55.0% | |
| ! | ACCCCGGTCTTTAGGAGGTT+TGG | + | chr3.4:70385190-70385209 | MS.gene031958:intron | 55.0% |
| ! | ATGGTTGGCTCTTGGCAGGA+GGG | + | chr3.4:70386825-70386844 | MS.gene031958:CDS | 55.0% |
| ! | CAGCTTTTGCTTCGAGGTGG+TGG | + | chr3.4:70385366-70385385 | MS.gene031958:intron | 55.0% |
| ! | CCCCGGTCTTTAGGAGGTTT+GGG | + | chr3.4:70385191-70385210 | MS.gene031958:intron | 55.0% |
| ! | CCCCTTGCCTCTTTTACGAG+TGG | + | chr3.4:70385722-70385741 | MS.gene031958:CDS | 55.0% |
| ! | GCTTCATGGATCTGGTTCGC+GGG | + | chr3.4:70386508-70386527 | MS.gene031958:intron | 55.0% |
| ! | TATGGTTGGCTCTTGGCAGG+AGG | + | chr3.4:70386824-70386843 | MS.gene031958:CDS | 55.0% |
| ! | TGTGGCCAGCTTTTGCTTCG+AGG | + | chr3.4:70385360-70385379 | MS.gene031958:intron | 55.0% |
| ! | TTCGAGGTGGTGGTTGGATG+TGG | + | chr3.4:70385376-70385395 | MS.gene031958:intron | 55.0% |
| !! | CTTTTGGAGGCAACCGTAGG+AGG | + | chr3.4:70385575-70385594 | MS.gene031958:intron | 55.0% |
| ACGGAGGTTGTGCGGAAGGT+GGG | + | chr3.4:70385437-70385456 | MS.gene031958:intron | 60.0% | |
| GGAAGACGGTGTGTCAACCC+CGG | + | chr3.4:70385174-70385193 | MS.gene031958:intron | 60.0% | |
| GGGGTGGGTGTGTTCGGATA+TGG | + | chr3.4:70385679-70385698 | MS.gene031958:CDS | 60.0% | |
| GTCGTTTGGCGAAGTGGAGG+TGG | + | chr3.4:70385243-70385262 | MS.gene031958:intron | 60.0% | |
| GTTTGGCGAAGTGGAGGTGG+AGG | + | chr3.4:70385246-70385265 | MS.gene031958:intron | 60.0% | |
| TACGGAGGTTGTGCGGAAGG+TGG | + | chr3.4:70385436-70385455 | MS.gene031958:intron | 60.0% | |
| TTGGAGGCAACCGTAGGAGG+AGG | + | chr3.4:70385578-70385597 | MS.gene031958:intron | 60.0% | |
| ! | GGCCAGCTTTTGCTTCGAGG+TGG | + | chr3.4:70385363-70385382 | MS.gene031958:intron | 60.0% |
| !! | AAGGAGTGGCGGGTGCGAAT+TGG | + | chr3.4:70385408-70385427 | MS.gene031958:intron | 60.0% |
| !! | CAACCGTAGGAGGAGGCACT+TGG | + | chr3.4:70385585-70385604 | MS.gene031958:intron | 60.0% |
| CTATGGGGAGCGGTGAAGGG+AGG | + | chr3.4:70385128-70385147 | MS.gene031958:intron | 65.0% | |
| GCTGCTATGGCGGCAGAAGC+TGG | + | chr3.4:70386222-70386241 | MS.gene031958:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.4 | gene | 70384013 | 70386997 | 70384013 | ID=MS.gene031958 |
| chr3.4 | mRNA | 70384013 | 70386997 | 70384013 | ID=MS.gene031958.t1;Parent=MS.gene031958 |
| chr3.4 | exon | 70384013 | 70384105 | 70384013 | ID=MS.gene031958.t1.exon1;Parent=MS.gene031958.t1 |
| chr3.4 | CDS | 70384013 | 70384105 | 70384013 | ID=cds.MS.gene031958.t1;Parent=MS.gene031958.t1 |
| chr3.4 | exon | 70384393 | 70384455 | 70384393 | ID=MS.gene031958.t1.exon2;Parent=MS.gene031958.t1 |
| chr3.4 | CDS | 70384393 | 70384455 | 70384393 | ID=cds.MS.gene031958.t1;Parent=MS.gene031958.t1 |
| chr3.4 | exon | 70385678 | 70385794 | 70385678 | ID=MS.gene031958.t1.exon3;Parent=MS.gene031958.t1 |
| chr3.4 | CDS | 70385678 | 70385794 | 70385678 | ID=cds.MS.gene031958.t1;Parent=MS.gene031958.t1 |
| chr3.4 | exon | 70385893 | 70385971 | 70385893 | ID=MS.gene031958.t1.exon4;Parent=MS.gene031958.t1 |
| chr3.4 | CDS | 70385893 | 70385971 | 70385893 | ID=cds.MS.gene031958.t1;Parent=MS.gene031958.t1 |
| chr3.4 | exon | 70386061 | 70386425 | 70386061 | ID=MS.gene031958.t1.exon5;Parent=MS.gene031958.t1 |
| chr3.4 | CDS | 70386061 | 70386425 | 70386061 | ID=cds.MS.gene031958.t1;Parent=MS.gene031958.t1 |
| chr3.4 | exon | 70386509 | 70386672 | 70386509 | ID=MS.gene031958.t1.exon6;Parent=MS.gene031958.t1 |
| chr3.4 | CDS | 70386509 | 70386672 | 70386509 | ID=cds.MS.gene031958.t1;Parent=MS.gene031958.t1 |
| chr3.4 | exon | 70386772 | 70386997 | 70386772 | ID=MS.gene031958.t1.exon7;Parent=MS.gene031958.t1 |
| chr3.4 | CDS | 70386772 | 70386997 | 70386772 | ID=cds.MS.gene031958.t1;Parent=MS.gene031958.t1 |
| Gene Sequence |
| Protein sequence |
