Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene008280.t1 | XP_003600716.2 | 95.5 | 491 | 22 | 0 | 1 | 491 | 1 | 491 | 1.60E-268 | 934.9 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene008280.t1 | Q9C7U5 | 66.9 | 477 | 151 | 2 | 18 | 488 | 26 | 501 | 6.8e-188 | 658.3 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene008280.t1 | G7J9D2 | 95.5 | 491 | 22 | 0 | 1 | 491 | 1 | 491 | 1.1e-268 | 934.9 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene008280 | MS.gene049885 | PPI |
MS.gene77492 | MS.gene008280 | PPI |
MS.gene08923 | MS.gene008280 | PPI |
MS.gene08772 | MS.gene008280 | PPI |
MS.gene79856 | MS.gene008280 | PPI |
MS.gene045397 | MS.gene008280 | PPI |
MS.gene08924 | MS.gene008280 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene008280.t1 | MTR_3g065460 | 95.519 | 491 | 22 | 0 | 1 | 491 | 1 | 491 | 0.0 | 964 |
MS.gene008280.t1 | MTR_5g078200 | 76.531 | 490 | 107 | 3 | 1 | 483 | 1 | 489 | 0.0 | 785 |
MS.gene008280.t1 | MTR_5g078200 | 76.754 | 456 | 99 | 2 | 35 | 483 | 1 | 456 | 0.0 | 739 |
MS.gene008280.t1 | MTR_1g031900 | 67.556 | 450 | 146 | 0 | 1 | 450 | 1 | 450 | 0.0 | 651 |
MS.gene008280.t1 | MTR_1g031900 | 67.562 | 447 | 145 | 0 | 1 | 447 | 1 | 447 | 0.0 | 646 |
MS.gene008280.t1 | MTR_4g132280 | 53.797 | 474 | 214 | 2 | 19 | 490 | 40 | 510 | 0.0 | 520 |
MS.gene008280.t1 | MTR_8g085720 | 50.307 | 489 | 233 | 3 | 8 | 486 | 10 | 498 | 8.96e-169 | 485 |
MS.gene008280.t1 | MTR_3g083580 | 49.776 | 446 | 221 | 2 | 8 | 452 | 10 | 453 | 3.09e-165 | 476 |
MS.gene008280.t1 | MTR_6g088885 | 40.972 | 432 | 243 | 4 | 23 | 445 | 26 | 454 | 5.17e-118 | 356 |
MS.gene008280.t1 | MTR_5g085580 | 40.807 | 446 | 238 | 3 | 24 | 446 | 25 | 467 | 2.10e-115 | 348 |
MS.gene008280.t1 | MTR_1g056640 | 39.262 | 461 | 243 | 3 | 20 | 446 | 34 | 491 | 2.08e-110 | 336 |
MS.gene008280.t1 | MTR_8g102340 | 40.440 | 455 | 224 | 6 | 1 | 445 | 1 | 418 | 1.33e-107 | 328 |
MS.gene008280.t1 | MTR_8g012400 | 37.037 | 459 | 271 | 8 | 1 | 446 | 6 | 459 | 8.39e-98 | 303 |
MS.gene008280.t1 | MTR_4g069940 | 36.264 | 455 | 274 | 4 | 5 | 446 | 9 | 460 | 1.76e-97 | 302 |
MS.gene008280.t1 | MTR_4g088155 | 36.761 | 457 | 266 | 7 | 7 | 446 | 8 | 458 | 4.96e-97 | 301 |
MS.gene008280.t1 | MTR_7g053500 | 36.009 | 436 | 262 | 6 | 25 | 446 | 27 | 459 | 1.49e-93 | 292 |
MS.gene008280.t1 | MTR_3g116510 | 35.762 | 453 | 277 | 5 | 5 | 447 | 8 | 456 | 1.99e-92 | 289 |
MS.gene008280.t1 | MTR_1g022160 | 34.783 | 460 | 263 | 5 | 21 | 447 | 21 | 476 | 3.22e-87 | 276 |
MS.gene008280.t1 | MTR_1g022160 | 34.716 | 458 | 262 | 5 | 21 | 445 | 21 | 474 | 2.10e-85 | 271 |
MS.gene008280.t1 | MTR_4g083500 | 36.089 | 496 | 280 | 13 | 24 | 490 | 44 | 531 | 1.17e-84 | 271 |
MS.gene008280.t1 | MTR_3g080410 | 42.508 | 327 | 184 | 2 | 24 | 349 | 26 | 349 | 7.51e-84 | 263 |
MS.gene008280.t1 | MTR_1g022160 | 34.368 | 451 | 259 | 5 | 21 | 438 | 21 | 467 | 7.36e-83 | 265 |
MS.gene008280.t1 | MTR_7g053500 | 36.979 | 384 | 225 | 6 | 77 | 446 | 2 | 382 | 1.26e-82 | 261 |
MS.gene008280.t1 | MTR_7g026340 | 36.092 | 435 | 252 | 10 | 24 | 443 | 23 | 446 | 3.02e-82 | 262 |
MS.gene008280.t1 | MTR_8g012400 | 37.008 | 381 | 226 | 6 | 77 | 446 | 2 | 379 | 1.14e-80 | 256 |
MS.gene008280.t1 | MTR_4g010200 | 37.057 | 367 | 218 | 4 | 7 | 363 | 13 | 376 | 4.47e-74 | 239 |
MS.gene008280.t1 | MTR_4g114850 | 40.061 | 327 | 192 | 2 | 25 | 350 | 27 | 350 | 9.16e-74 | 238 |
MS.gene008280.t1 | MTR_4g114850 | 40.061 | 327 | 192 | 2 | 25 | 350 | 27 | 350 | 1.18e-73 | 237 |
MS.gene008280.t1 | MTR_4g114850 | 40.061 | 327 | 192 | 2 | 25 | 350 | 27 | 350 | 2.35e-73 | 237 |
MS.gene008280.t1 | MTR_4g052970 | 37.920 | 327 | 194 | 4 | 24 | 347 | 29 | 349 | 1.47e-70 | 229 |
MS.gene008280.t1 | MTR_1g007810 | 39.875 | 321 | 182 | 6 | 24 | 341 | 16 | 328 | 7.99e-69 | 224 |
MS.gene008280.t1 | MTR_1g077990 | 37.963 | 324 | 195 | 4 | 24 | 346 | 31 | 349 | 9.59e-68 | 223 |
MS.gene008280.t1 | MTR_4g084480 | 35.260 | 346 | 219 | 3 | 2 | 346 | 3 | 344 | 5.23e-67 | 220 |
MS.gene008280.t1 | MTR_4g084480 | 35.928 | 334 | 209 | 3 | 2 | 334 | 10 | 339 | 8.49e-67 | 220 |
MS.gene008280.t1 | MTR_4g084480 | 35.928 | 334 | 209 | 3 | 2 | 334 | 10 | 339 | 9.26e-67 | 220 |
MS.gene008280.t1 | MTR_1g022160 | 38.080 | 323 | 195 | 3 | 21 | 341 | 21 | 340 | 1.46e-66 | 220 |
MS.gene008280.t1 | MTR_2g086530 | 37.771 | 323 | 194 | 3 | 24 | 345 | 8 | 324 | 1.23e-64 | 214 |
MS.gene008280.t1 | MTR_2g086530 | 37.771 | 323 | 194 | 3 | 24 | 345 | 29 | 345 | 1.60e-64 | 214 |
MS.gene008280.t1 | MTR_4g076490 | 36.810 | 326 | 187 | 6 | 24 | 347 | 97 | 405 | 1.38e-63 | 213 |
MS.gene008280.t1 | MTR_2g019345 | 35.207 | 338 | 205 | 4 | 1 | 333 | 1 | 329 | 5.22e-63 | 210 |
MS.gene008280.t1 | MTR_4g076255 | 37.888 | 322 | 184 | 6 | 24 | 345 | 25 | 330 | 5.55e-63 | 208 |
MS.gene008280.t1 | MTR_4g076500 | 36.086 | 327 | 197 | 3 | 20 | 345 | 74 | 389 | 6.81e-63 | 210 |
MS.gene008280.t1 | MTR_4g076470 | 37.168 | 339 | 186 | 9 | 1 | 334 | 1 | 317 | 7.59e-62 | 205 |
MS.gene008280.t1 | MTR_3g116510 | 35.185 | 324 | 198 | 3 | 132 | 447 | 3 | 322 | 1.55e-61 | 204 |
MS.gene008280.t1 | MTR_1g053320 | 31.808 | 459 | 284 | 15 | 5 | 446 | 11 | 457 | 3.66e-61 | 208 |
MS.gene008280.t1 | MTR_4g076440 | 35.484 | 341 | 203 | 7 | 1 | 341 | 1 | 324 | 7.24e-61 | 202 |
MS.gene008280.t1 | MTR_4g076430 | 34.870 | 347 | 205 | 8 | 1 | 345 | 1 | 328 | 1.45e-58 | 196 |
MS.gene008280.t1 | MTR_7g081350 | 35.826 | 321 | 193 | 7 | 24 | 343 | 27 | 335 | 1.17e-57 | 194 |
MS.gene008280.t1 | MTR_4g112025 | 30.736 | 462 | 288 | 17 | 4 | 446 | 9 | 457 | 1.27e-57 | 199 |
MS.gene008280.t1 | MTR_4g076570 | 36.129 | 310 | 189 | 3 | 24 | 333 | 22 | 322 | 3.01e-57 | 194 |
MS.gene008280.t1 | MTR_1g010120 | 31.250 | 464 | 275 | 17 | 3 | 445 | 8 | 448 | 3.16e-57 | 197 |
MS.gene008280.t1 | MTR_2g027560 | 32.346 | 439 | 270 | 14 | 21 | 445 | 25 | 450 | 1.04e-56 | 196 |
MS.gene008280.t1 | MTR_1g052430 | 36.774 | 310 | 187 | 4 | 24 | 333 | 32 | 332 | 4.49e-56 | 192 |
MS.gene008280.t1 | MTR_8g092070 | 30.385 | 441 | 277 | 16 | 22 | 446 | 32 | 458 | 2.63e-55 | 194 |
MS.gene008280.t1 | MTR_2g034470 | 37.309 | 327 | 192 | 7 | 24 | 348 | 30 | 345 | 1.50e-54 | 187 |
MS.gene008280.t1 | MTR_2g034440 | 37.460 | 315 | 184 | 7 | 24 | 336 | 22 | 325 | 5.32e-54 | 185 |
MS.gene008280.t1 | MTR_2g034470 | 37.107 | 318 | 187 | 7 | 33 | 348 | 4 | 310 | 7.42e-54 | 184 |
MS.gene008280.t1 | MTR_2g034480 | 34.582 | 347 | 211 | 9 | 5 | 348 | 9 | 342 | 1.85e-53 | 184 |
MS.gene008280.t1 | MTR_7g085390 | 30.023 | 443 | 271 | 16 | 24 | 445 | 26 | 450 | 1.09e-52 | 185 |
MS.gene008280.t1 | MTR_4g124440 | 30.172 | 464 | 279 | 21 | 5 | 445 | 10 | 451 | 1.31e-52 | 185 |
MS.gene008280.t1 | MTR_3g031770 | 31.333 | 450 | 266 | 15 | 24 | 453 | 27 | 453 | 1.77e-52 | 185 |
MS.gene008280.t1 | MTR_3g095050 | 29.336 | 467 | 296 | 17 | 7 | 454 | 13 | 464 | 1.28e-51 | 182 |
MS.gene008280.t1 | MTR_3g108600 | 30.612 | 441 | 251 | 16 | 24 | 445 | 31 | 435 | 1.09e-50 | 179 |
MS.gene008280.t1 | MTR_6g032820 | 29.977 | 427 | 259 | 16 | 24 | 427 | 26 | 435 | 1.23e-47 | 171 |
MS.gene008280.t1 | MTR_7g081370 | 31.287 | 342 | 207 | 9 | 3 | 343 | 9 | 323 | 4.45e-45 | 160 |
MS.gene008280.t1 | MTR_5g081720 | 33.553 | 304 | 192 | 7 | 40 | 341 | 53 | 348 | 1.83e-41 | 152 |
MS.gene008280.t1 | MTR_4g134280 | 30.154 | 325 | 195 | 14 | 136 | 445 | 29 | 336 | 5.35e-32 | 126 |
MS.gene008280.t1 | MTR_8g089400 | 41.935 | 124 | 65 | 3 | 358 | 479 | 34 | 152 | 3.03e-26 | 104 |
MS.gene008280.t1 | MTR_8g089400 | 41.935 | 124 | 65 | 3 | 358 | 479 | 54 | 172 | 5.72e-26 | 104 |
MS.gene008280.t1 | MTR_4g079530 | 39.437 | 142 | 74 | 3 | 357 | 488 | 33 | 172 | 1.21e-25 | 103 |
MS.gene008280.t1 | MTR_4g079530 | 45.745 | 94 | 51 | 0 | 357 | 450 | 33 | 126 | 8.77e-24 | 97.1 |
MS.gene008280.t1 | MTR_8g085390 | 37.815 | 119 | 71 | 2 | 339 | 455 | 6 | 123 | 1.20e-20 | 90.1 |
MS.gene008280.t1 | MTR_4g083070 | 42.202 | 109 | 53 | 3 | 343 | 450 | 11 | 110 | 3.48e-20 | 89.0 |
MS.gene008280.t1 | MTR_8g085440 | 38.889 | 90 | 54 | 1 | 357 | 446 | 28 | 116 | 5.68e-20 | 85.9 |
MS.gene008280.t1 | MTR_7g111600 | 46.512 | 86 | 45 | 1 | 361 | 446 | 160 | 244 | 2.48e-19 | 88.2 |
MS.gene008280.t1 | MTR_7g111600 | 46.512 | 86 | 45 | 1 | 361 | 446 | 160 | 244 | 3.85e-19 | 88.6 |
MS.gene008280.t1 | MTR_7g111600 | 46.512 | 86 | 45 | 1 | 361 | 446 | 160 | 244 | 3.97e-19 | 88.6 |
MS.gene008280.t1 | MTR_4g109490 | 48.235 | 85 | 42 | 2 | 361 | 445 | 24 | 106 | 9.42e-19 | 85.5 |
MS.gene008280.t1 | MTR_5g097420 | 42.353 | 85 | 49 | 0 | 359 | 443 | 28 | 112 | 1.69e-18 | 81.6 |
MS.gene008280.t1 | MTR_5g091650 | 40.860 | 93 | 54 | 1 | 356 | 448 | 103 | 194 | 1.25e-17 | 81.6 |
MS.gene008280.t1 | MTR_4g133735 | 44.444 | 99 | 51 | 3 | 350 | 445 | 15 | 112 | 1.35e-17 | 79.0 |
MS.gene008280.t1 | MTR_5g091650 | 40.860 | 93 | 54 | 1 | 356 | 448 | 103 | 194 | 1.46e-17 | 83.2 |
MS.gene008280.t1 | MTR_5g044530 | 41.053 | 95 | 53 | 2 | 356 | 448 | 17 | 110 | 1.83e-17 | 82.4 |
MS.gene008280.t1 | MTR_4g133730 | 39.175 | 97 | 57 | 1 | 351 | 445 | 16 | 112 | 2.88e-17 | 78.2 |
MS.gene008280.t1 | MTR_8g085420 | 37.647 | 85 | 52 | 1 | 357 | 441 | 28 | 111 | 2.94e-17 | 79.0 |
MS.gene008280.t1 | MTR_2g049670 | 45.263 | 95 | 50 | 2 | 361 | 455 | 158 | 250 | 2.64e-16 | 80.5 |
MS.gene008280.t1 | MTR_1g084820 | 44.706 | 85 | 45 | 2 | 357 | 441 | 416 | 498 | 5.08e-16 | 81.3 |
MS.gene008280.t1 | MTR_1g084820 | 44.706 | 85 | 45 | 2 | 357 | 441 | 416 | 498 | 6.77e-16 | 80.9 |
MS.gene008280.t1 | MTR_3g048280 | 38.889 | 90 | 54 | 1 | 356 | 445 | 107 | 195 | 1.77e-15 | 75.5 |
MS.gene008280.t1 | MTR_5g015720 | 42.529 | 87 | 47 | 2 | 361 | 445 | 329 | 414 | 2.62e-14 | 75.1 |
MS.gene008280.t1 | MTR_2g072500 | 36.782 | 87 | 53 | 1 | 359 | 445 | 6 | 90 | 1.04e-13 | 67.0 |
MS.gene008280.t1 | MTR_4g036775 | 27.473 | 182 | 120 | 5 | 202 | 381 | 41 | 212 | 3.51e-13 | 69.3 |
MS.gene008280.t1 | MTR_4g036680 | 27.473 | 182 | 120 | 5 | 202 | 381 | 41 | 212 | 1.49e-12 | 67.4 |
MS.gene008280.t1 | MTR_1g116870 | 36.471 | 85 | 53 | 1 | 361 | 445 | 276 | 359 | 1.97e-12 | 68.9 |
MS.gene008280.t1 | MTR_8g085400 | 39.506 | 81 | 45 | 2 | 359 | 439 | 31 | 107 | 2.57e-12 | 63.9 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene008280.t1 | AT1G66250 | 66.876 | 477 | 151 | 2 | 18 | 488 | 26 | 501 | 0.0 | 674 |
MS.gene008280.t1 | AT2G01630 | 66.154 | 455 | 144 | 3 | 20 | 465 | 19 | 472 | 0.0 | 641 |
MS.gene008280.t1 | AT2G01630 | 67.857 | 420 | 135 | 0 | 20 | 439 | 19 | 438 | 0.0 | 624 |
MS.gene008280.t1 | AT2G01630 | 68.548 | 372 | 117 | 0 | 20 | 391 | 19 | 390 | 0.0 | 550 |
MS.gene008280.t1 | AT1G11820 | 55.862 | 435 | 192 | 0 | 19 | 453 | 39 | 473 | 0.0 | 531 |
MS.gene008280.t1 | AT1G11820 | 55.344 | 421 | 188 | 0 | 19 | 439 | 39 | 459 | 4.03e-178 | 508 |
MS.gene008280.t1 | AT3G13560 | 51.606 | 436 | 210 | 1 | 14 | 449 | 16 | 450 | 3.93e-157 | 456 |
MS.gene008280.t1 | AT3G13560 | 51.606 | 436 | 210 | 1 | 14 | 449 | 16 | 450 | 3.93e-157 | 456 |
MS.gene008280.t1 | AT3G13560 | 51.606 | 436 | 210 | 1 | 14 | 449 | 16 | 450 | 3.93e-157 | 456 |
MS.gene008280.t1 | AT3G13560 | 51.606 | 436 | 210 | 1 | 14 | 449 | 16 | 450 | 3.93e-157 | 456 |
MS.gene008280.t1 | AT3G13560 | 51.606 | 436 | 210 | 1 | 14 | 449 | 16 | 450 | 3.93e-157 | 456 |
MS.gene008280.t1 | AT1G11820 | 56.193 | 331 | 145 | 0 | 19 | 349 | 39 | 369 | 2.81e-135 | 396 |
MS.gene008280.t1 | AT2G05790 | 41.964 | 448 | 232 | 4 | 24 | 446 | 25 | 469 | 2.21e-119 | 358 |
MS.gene008280.t1 | AT4G26830 | 39.693 | 456 | 261 | 5 | 1 | 446 | 1 | 452 | 1.02e-113 | 343 |
MS.gene008280.t1 | AT4G26830 | 39.783 | 460 | 254 | 5 | 6 | 446 | 1 | 456 | 1.77e-113 | 343 |
MS.gene008280.t1 | AT4G29360 | 39.270 | 466 | 247 | 3 | 24 | 456 | 27 | 489 | 7.96e-113 | 344 |
MS.gene008280.t1 | AT4G29360 | 39.270 | 466 | 247 | 3 | 24 | 456 | 37 | 499 | 1.38e-112 | 343 |
MS.gene008280.t1 | AT5G55180 | 40.690 | 435 | 244 | 3 | 23 | 446 | 26 | 457 | 1.42e-111 | 338 |
MS.gene008280.t1 | AT5G56590 | 39.815 | 432 | 246 | 5 | 24 | 445 | 26 | 453 | 8.88e-110 | 335 |
MS.gene008280.t1 | AT5G55180 | 40.559 | 429 | 241 | 3 | 23 | 440 | 26 | 451 | 5.81e-108 | 329 |
MS.gene008280.t1 | AT4G34480 | 37.748 | 453 | 262 | 6 | 3 | 446 | 7 | 448 | 8.73e-95 | 296 |
MS.gene008280.t1 | AT3G23770 | 36.591 | 440 | 258 | 6 | 24 | 446 | 37 | 472 | 1.89e-94 | 295 |
MS.gene008280.t1 | AT2G16230 | 36.927 | 436 | 264 | 4 | 18 | 446 | 19 | 450 | 8.05e-93 | 291 |
MS.gene008280.t1 | AT5G24318 | 36.166 | 459 | 267 | 10 | 2 | 443 | 4 | 453 | 1.64e-91 | 286 |
MS.gene008280.t1 | AT3G07320 | 35.862 | 435 | 262 | 8 | 25 | 446 | 26 | 456 | 1.44e-89 | 281 |
MS.gene008280.t1 | AT4G14080 | 34.325 | 437 | 269 | 6 | 24 | 446 | 42 | 474 | 2.75e-89 | 281 |
MS.gene008280.t1 | AT5G24318 | 36.044 | 455 | 265 | 10 | 2 | 439 | 4 | 449 | 3.84e-89 | 280 |
MS.gene008280.t1 | AT3G55430 | 36.175 | 434 | 252 | 12 | 24 | 445 | 29 | 449 | 1.01e-79 | 255 |
MS.gene008280.t1 | AT3G15800 | 38.769 | 325 | 194 | 3 | 25 | 347 | 44 | 365 | 1.94e-73 | 238 |
MS.gene008280.t1 | AT2G26600 | 38.245 | 319 | 191 | 3 | 25 | 341 | 35 | 349 | 7.09e-70 | 228 |
MS.gene008280.t1 | AT2G39640 | 33.626 | 455 | 274 | 16 | 1 | 446 | 8 | 443 | 1.07e-69 | 232 |
MS.gene008280.t1 | AT2G39640 | 35.106 | 94 | 60 | 1 | 356 | 449 | 455 | 547 | 1.42e-15 | 79.7 |
MS.gene008280.t1 | AT4G18340 | 36.888 | 347 | 206 | 4 | 2 | 343 | 12 | 350 | 4.75e-69 | 226 |
MS.gene008280.t1 | AT4G18340 | 36.888 | 347 | 206 | 4 | 2 | 343 | 12 | 350 | 1.35e-68 | 225 |
MS.gene008280.t1 | AT2G27500 | 34.897 | 341 | 218 | 2 | 24 | 363 | 29 | 366 | 8.30e-68 | 222 |
MS.gene008280.t1 | AT2G27500 | 34.604 | 341 | 219 | 2 | 24 | 363 | 29 | 366 | 1.82e-67 | 222 |
MS.gene008280.t1 | AT4G34480 | 38.372 | 344 | 194 | 5 | 112 | 446 | 3 | 337 | 4.09e-67 | 221 |
MS.gene008280.t1 | AT5G24318 | 37.695 | 321 | 181 | 6 | 136 | 445 | 4 | 316 | 5.35e-67 | 218 |
MS.gene008280.t1 | AT5G42720 | 36.152 | 343 | 214 | 3 | 6 | 346 | 8 | 347 | 9.93e-67 | 221 |
MS.gene008280.t1 | AT4G16260 | 37.069 | 348 | 208 | 6 | 1 | 348 | 1 | 337 | 1.37e-66 | 218 |
MS.gene008280.t1 | AT4G34480 | 37.464 | 347 | 211 | 3 | 3 | 348 | 7 | 348 | 1.73e-66 | 218 |
MS.gene008280.t1 | AT1G32860 | 37.771 | 323 | 194 | 4 | 24 | 343 | 29 | 347 | 2.17e-66 | 220 |
MS.gene008280.t1 | AT5G42100 | 38.235 | 340 | 198 | 6 | 10 | 345 | 17 | 348 | 2.90e-66 | 219 |
MS.gene008280.t1 | AT5G42100 | 38.235 | 340 | 198 | 6 | 10 | 345 | 17 | 348 | 3.94e-66 | 219 |
MS.gene008280.t1 | AT3G61810 | 36.012 | 336 | 204 | 4 | 14 | 346 | 45 | 372 | 2.27e-65 | 216 |
MS.gene008280.t1 | AT5G24318 | 36.311 | 347 | 206 | 7 | 2 | 341 | 4 | 342 | 5.36e-65 | 215 |
MS.gene008280.t1 | AT1G30080 | 36.070 | 341 | 213 | 3 | 2 | 341 | 14 | 350 | 6.18e-65 | 215 |
MS.gene008280.t1 | AT1G30080 | 36.070 | 341 | 213 | 3 | 2 | 341 | 14 | 350 | 8.92e-65 | 215 |
MS.gene008280.t1 | AT3G57270 | 38.558 | 319 | 185 | 5 | 24 | 341 | 27 | 335 | 1.17e-63 | 210 |
MS.gene008280.t1 | AT4G16260 | 37.975 | 316 | 185 | 6 | 33 | 348 | 4 | 308 | 1.84e-63 | 209 |
MS.gene008280.t1 | AT5G58090 | 31.973 | 441 | 266 | 17 | 24 | 446 | 22 | 446 | 3.19e-60 | 205 |
MS.gene008280.t1 | AT3G24330 | 33.258 | 442 | 261 | 17 | 24 | 446 | 39 | 465 | 1.25e-58 | 201 |
MS.gene008280.t1 | AT3G57260 | 37.419 | 310 | 179 | 6 | 24 | 333 | 32 | 326 | 7.29e-58 | 195 |
MS.gene008280.t1 | AT3G57260 | 37.419 | 310 | 179 | 6 | 24 | 333 | 48 | 342 | 1.29e-57 | 195 |
MS.gene008280.t1 | AT4G31140 | 31.155 | 459 | 285 | 17 | 1 | 445 | 7 | 448 | 2.32e-57 | 198 |
MS.gene008280.t1 | AT3G04010 | 28.931 | 477 | 301 | 17 | 24 | 481 | 33 | 490 | 6.32e-56 | 194 |
MS.gene008280.t1 | AT2G27500 | 35.417 | 288 | 182 | 2 | 74 | 360 | 1 | 285 | 8.02e-56 | 189 |
MS.gene008280.t1 | AT5G18220 | 28.510 | 463 | 297 | 13 | 7 | 450 | 13 | 460 | 1.42e-55 | 193 |
MS.gene008280.t1 | AT5G20870 | 32.522 | 452 | 255 | 20 | 24 | 446 | 30 | 460 | 1.33e-54 | 191 |
MS.gene008280.t1 | AT2G19440 | 31.222 | 442 | 268 | 17 | 24 | 446 | 21 | 445 | 1.91e-54 | 190 |
MS.gene008280.t1 | AT2G19440 | 31.222 | 442 | 268 | 17 | 24 | 446 | 21 | 445 | 1.91e-54 | 190 |
MS.gene008280.t1 | AT2G26600 | 39.286 | 252 | 147 | 3 | 92 | 341 | 8 | 255 | 3.38e-53 | 181 |
MS.gene008280.t1 | AT1G77780 | 31.965 | 341 | 219 | 7 | 3 | 341 | 1 | 330 | 1.80e-52 | 181 |
MS.gene008280.t1 | AT5G58480 | 31.637 | 452 | 280 | 14 | 24 | 462 | 26 | 461 | 4.44e-52 | 183 |
MS.gene008280.t1 | AT4G17180 | 32.112 | 464 | 259 | 19 | 8 | 445 | 7 | 440 | 1.10e-51 | 182 |
MS.gene008280.t1 | AT3G55780 | 33.956 | 321 | 203 | 7 | 38 | 355 | 49 | 363 | 1.72e-51 | 179 |
MS.gene008280.t1 | AT1G64760 | 30.248 | 443 | 271 | 17 | 24 | 446 | 25 | 449 | 1.38e-50 | 179 |
MS.gene008280.t1 | AT1G64760 | 30.248 | 443 | 271 | 17 | 24 | 446 | 25 | 449 | 1.38e-50 | 179 |
MS.gene008280.t1 | AT5G20340 | 34.462 | 325 | 194 | 8 | 24 | 343 | 43 | 353 | 1.72e-50 | 176 |
MS.gene008280.t1 | AT3G57240 | 35.294 | 323 | 191 | 8 | 24 | 345 | 35 | 340 | 8.61e-50 | 174 |
MS.gene008280.t1 | AT5G20330 | 34.568 | 324 | 195 | 7 | 24 | 343 | 34 | 344 | 1.28e-49 | 173 |
MS.gene008280.t1 | AT3G46570 | 36.842 | 323 | 190 | 9 | 24 | 341 | 27 | 340 | 7.98e-49 | 172 |
MS.gene008280.t1 | AT5G20390 | 33.232 | 328 | 194 | 8 | 24 | 343 | 33 | 343 | 2.88e-48 | 170 |
MS.gene008280.t1 | AT1G33220 | 32.792 | 308 | 192 | 5 | 24 | 328 | 34 | 329 | 1.77e-47 | 167 |
MS.gene008280.t1 | AT5G64790 | 27.397 | 438 | 290 | 14 | 24 | 446 | 28 | 452 | 1.62e-44 | 163 |
MS.gene008280.t1 | AT1G77790 | 31.884 | 345 | 220 | 8 | 1 | 343 | 10 | 341 | 2.51e-44 | 159 |
MS.gene008280.t1 | AT5G20560 | 33.333 | 315 | 193 | 6 | 24 | 334 | 34 | 335 | 3.45e-43 | 156 |
MS.gene008280.t1 | AT3G58100 | 45.833 | 96 | 52 | 0 | 359 | 454 | 39 | 134 | 9.40e-26 | 103 |
MS.gene008280.t1 | AT3G58100 | 45.833 | 96 | 52 | 0 | 359 | 454 | 115 | 210 | 3.08e-25 | 104 |
MS.gene008280.t1 | AT4G05430 | 44.565 | 92 | 51 | 0 | 357 | 448 | 19 | 110 | 2.73e-24 | 99.0 |
MS.gene008280.t1 | AT1G66870 | 35.338 | 133 | 72 | 2 | 323 | 445 | 9 | 137 | 5.64e-24 | 97.8 |
MS.gene008280.t1 | AT1G66870 | 43.820 | 89 | 50 | 0 | 357 | 445 | 22 | 110 | 8.62e-24 | 96.3 |
MS.gene008280.t1 | AT4G05430 | 44.565 | 92 | 51 | 0 | 357 | 448 | 44 | 135 | 1.09e-23 | 97.8 |
MS.gene008280.t1 | AT1G66852 | 44.565 | 92 | 50 | 1 | 354 | 445 | 19 | 109 | 1.47e-23 | 95.9 |
MS.gene008280.t1 | AT5G63240 | 45.263 | 95 | 49 | 2 | 353 | 445 | 33 | 126 | 1.34e-22 | 93.6 |
MS.gene008280.t1 | AT1G18650 | 44.944 | 89 | 48 | 1 | 360 | 448 | 20 | 107 | 7.63e-22 | 91.7 |
MS.gene008280.t1 | AT4G05430 | 45.783 | 83 | 45 | 0 | 357 | 439 | 44 | 126 | 1.36e-21 | 90.9 |
MS.gene008280.t1 | AT1G18650 | 44.944 | 89 | 48 | 1 | 360 | 448 | 20 | 107 | 1.50e-21 | 92.4 |
MS.gene008280.t1 | AT5G35740 | 40.217 | 92 | 54 | 1 | 355 | 445 | 24 | 115 | 3.52e-20 | 86.7 |
MS.gene008280.t1 | AT5G61130 | 45.977 | 87 | 46 | 1 | 360 | 446 | 20 | 105 | 5.61e-20 | 88.6 |
MS.gene008280.t1 | AT1G29380 | 44.444 | 90 | 49 | 1 | 361 | 450 | 148 | 236 | 7.74e-20 | 89.7 |
MS.gene008280.t1 | AT1G29380 | 44.706 | 85 | 46 | 1 | 361 | 445 | 148 | 231 | 1.95e-19 | 89.4 |
MS.gene008280.t1 | AT1G66855 | 40.909 | 88 | 52 | 0 | 358 | 445 | 23 | 110 | 2.32e-19 | 84.0 |
MS.gene008280.t1 | AT5G08000 | 46.067 | 89 | 47 | 1 | 358 | 446 | 37 | 124 | 2.35e-19 | 87.0 |
MS.gene008280.t1 | AT2G30933 | 39.130 | 115 | 68 | 2 | 334 | 448 | 56 | 168 | 4.79e-19 | 86.7 |
MS.gene008280.t1 | AT4G13600 | 41.573 | 89 | 51 | 1 | 361 | 449 | 61 | 148 | 6.59e-19 | 86.3 |
MS.gene008280.t1 | AT2G04910 | 42.353 | 85 | 49 | 0 | 361 | 445 | 15 | 99 | 2.15e-18 | 80.9 |
MS.gene008280.t1 | AT4G09462 | 32.710 | 107 | 71 | 1 | 339 | 445 | 7 | 112 | 2.26e-18 | 81.3 |
MS.gene008280.t1 | AT5G67460 | 23.684 | 380 | 222 | 11 | 79 | 445 | 53 | 377 | 3.22e-18 | 86.7 |
MS.gene008280.t1 | AT5G08000 | 45.977 | 87 | 46 | 1 | 360 | 446 | 20 | 105 | 3.39e-18 | 83.2 |
MS.gene008280.t1 | AT1G78520 | 36.893 | 103 | 63 | 1 | 343 | 445 | 14 | 114 | 6.04e-18 | 80.1 |
MS.gene008280.t1 | AT2G03505 | 40.426 | 94 | 53 | 2 | 360 | 451 | 20 | 112 | 6.30e-18 | 80.1 |
MS.gene008280.t1 | AT4G16165 | 33.019 | 106 | 68 | 1 | 340 | 445 | 8 | 110 | 7.34e-18 | 79.7 |
MS.gene008280.t1 | AT2G43670 | 37.895 | 95 | 57 | 1 | 351 | 445 | 25 | 117 | 8.63e-18 | 79.7 |
MS.gene008280.t1 | AT4G09467 | 36.782 | 87 | 54 | 1 | 359 | 445 | 29 | 114 | 9.26e-18 | 79.7 |
MS.gene008280.t1 | AT4G09464 | 36.782 | 87 | 54 | 1 | 359 | 445 | 29 | 114 | 9.26e-18 | 79.7 |
MS.gene008280.t1 | AT4G09465 | 36.782 | 87 | 54 | 1 | 359 | 445 | 29 | 114 | 1.33e-17 | 79.0 |
MS.gene008280.t1 | AT1G09460 | 44.944 | 89 | 46 | 2 | 357 | 445 | 133 | 218 | 2.68e-17 | 83.6 |
MS.gene008280.t1 | AT5G63250 | 40.230 | 87 | 50 | 1 | 361 | 445 | 42 | 128 | 4.64e-17 | 78.2 |
MS.gene008280.t1 | AT1G29380 | 42.683 | 82 | 46 | 1 | 361 | 442 | 148 | 228 | 7.19e-17 | 80.1 |
MS.gene008280.t1 | AT1G29380 | 42.683 | 82 | 46 | 1 | 361 | 442 | 148 | 228 | 7.19e-17 | 80.1 |
MS.gene008280.t1 | AT2G03505 | 40.659 | 91 | 51 | 2 | 360 | 448 | 20 | 109 | 1.19e-16 | 78.2 |
MS.gene008280.t1 | AT2G03505 | 40.659 | 91 | 51 | 2 | 360 | 448 | 20 | 109 | 1.19e-16 | 78.2 |
MS.gene008280.t1 | AT2G03505 | 40.659 | 91 | 51 | 2 | 360 | 448 | 20 | 109 | 1.19e-16 | 78.2 |
MS.gene008280.t1 | AT4G09090 | 37.647 | 85 | 52 | 1 | 361 | 445 | 31 | 114 | 1.28e-16 | 76.3 |
MS.gene008280.t1 | AT5G63225 | 39.080 | 87 | 52 | 1 | 359 | 445 | 23 | 108 | 3.27e-16 | 75.1 |
MS.gene008280.t1 | AT5G67460 | 23.262 | 374 | 219 | 11 | 79 | 439 | 53 | 371 | 8.07e-16 | 79.7 |
MS.gene008280.t1 | AT2G04910 | 40.000 | 80 | 48 | 0 | 361 | 440 | 15 | 94 | 1.03e-15 | 73.9 |
MS.gene008280.t1 | AT4G09466 | 34.483 | 87 | 56 | 1 | 359 | 445 | 29 | 114 | 1.20e-15 | 73.6 |
MS.gene008280.t1 | AT2G30933 | 41.975 | 81 | 46 | 1 | 359 | 439 | 80 | 159 | 1.62e-15 | 74.3 |
MS.gene008280.t1 | AT2G30933 | 41.975 | 81 | 46 | 1 | 359 | 439 | 80 | 159 | 1.62e-15 | 74.3 |
MS.gene008280.t1 | AT5G63230 | 37.931 | 87 | 53 | 1 | 359 | 445 | 24 | 109 | 2.50e-15 | 72.4 |
MS.gene008280.t1 | AT5G53610 | 36.782 | 87 | 53 | 1 | 359 | 445 | 26 | 110 | 4.45e-15 | 71.6 |
MS.gene008280.t1 | AT5G53600 | 37.778 | 90 | 54 | 1 | 356 | 445 | 24 | 111 | 2.13e-14 | 69.7 |
MS.gene008280.t1 | AT1G13830 | 36.667 | 90 | 54 | 2 | 358 | 445 | 32 | 120 | 1.99e-12 | 67.0 |
MS.gene008280.t1 | AT1G69295 | 40.244 | 82 | 47 | 2 | 361 | 442 | 21 | 100 | 2.96e-12 | 66.6 |
MS.gene008280.t1 | AT1G69295 | 40.244 | 82 | 47 | 2 | 361 | 442 | 17 | 96 | 3.69e-12 | 66.2 |
MS.gene008280.t1 | AT2G29735 | 31.868 | 91 | 59 | 2 | 357 | 445 | 27 | 116 | 4.80e-12 | 63.2 |
MS.gene008280.t1 | AT2G43660 | 30.000 | 110 | 74 | 1 | 339 | 445 | 9 | 118 | 6.16e-12 | 63.2 |
MS.gene008280.t1 | AT1G13830 | 36.782 | 87 | 52 | 2 | 361 | 445 | 21 | 106 | 1.08e-11 | 64.3 |
MS.gene008280.t1 | AT2G43660 | 33.721 | 86 | 57 | 0 | 360 | 445 | 34 | 119 | 2.34e-11 | 61.6 |
MS.gene008280.t1 | AT1G79480 | 32.941 | 85 | 56 | 1 | 361 | 445 | 311 | 394 | 3.99e-11 | 65.1 |
MS.gene008280.t1 | AT1G79480 | 32.941 | 85 | 56 | 1 | 361 | 445 | 310 | 393 | 4.35e-11 | 65.1 |
Find 99 sgRNAs with CRISPR-Local
Find 225 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CGAATTCCACAGCTTCAAAT+TGG | 0.180168 | 3.1:+54856791 | MS.gene008280:CDS |
TGCATTGCAGAACCATTTAT+TGG | 0.207713 | 3.1:+54856580 | MS.gene008280:intron |
CCCGGGGCGCTTTGGAGTTC+CGG | 0.235746 | 3.1:-54857421 | None:intergenic |
GATTCTTTGTTTGGTGGAAT+TGG | 0.284643 | 3.1:-54857183 | None:intergenic |
GACAGGTTCAGGTGCAGTTT+TGG | 0.289322 | 3.1:+54857563 | MS.gene008280:CDS |
ATTCCGGCCTGCAGCATCTT+TGG | 0.306131 | 3.1:-54857636 | None:intergenic |
CCAATGTTCACCCCAATAAA+TGG | 0.317808 | 3.1:-54856592 | None:intergenic |
ATTGCTAGAAGCTCTTCATT+AGG | 0.318741 | 3.1:-54856760 | None:intergenic |
TGTGATAGGACTTCTAATAT+TGG | 0.322418 | 3.1:+54858524 | MS.gene008280:CDS |
GCATTGCAGAACCATTTATT+GGG | 0.336407 | 3.1:+54856581 | MS.gene008280:intron |
GCATGAGCAACAACATTATC+AGG | 0.341654 | 3.1:-54857726 | None:intergenic |
GAATCAATAGATTCTTTGTT+TGG | 0.344151 | 3.1:-54857192 | None:intergenic |
AGTGTTGCATTAGGCTCATT+AGG | 0.359603 | 3.1:-54857345 | None:intergenic |
CATTTATTGGGGTGAACATT+GGG | 0.360165 | 3.1:+54856593 | MS.gene008280:CDS |
CACGGTTCTTGTATATTTCC+AGG | 0.363901 | 3.1:+54858309 | MS.gene008280:CDS |
TTGCTAGAAGCTCTTCATTA+GGG | 0.364621 | 3.1:-54856759 | None:intergenic |
CTCAAATGGTATAATCCCTT+TGG | 0.365063 | 3.1:+54857143 | MS.gene008280:CDS |
CCCGTGGTGGTGACCGAAAC+CGG | 0.365853 | 3.1:+54857303 | MS.gene008280:CDS |
AAATGTGATGGTGCAGGGGC+AGG | 0.372606 | 3.1:-54858450 | None:intergenic |
AGAAGCCTTCTAATTGTGAT+AGG | 0.384591 | 3.1:+54858510 | MS.gene008280:CDS |
TGATGCTTATTATCATAAGA+TGG | 0.388926 | 3.1:+54857761 | MS.gene008280:CDS |
ACACCAATCCCGGGGCGCTT+TGG | 0.391176 | 3.1:-54857429 | None:intergenic |
TGCTGCAGGCCGGAATAGAT+TGG | 0.408046 | 3.1:+54857643 | MS.gene008280:CDS |
ATGTGATGGTGCAGGGGCAG+GGG | 0.412267 | 3.1:-54858448 | None:intergenic |
TCCACAAGCCCAATCTATTC+CGG | 0.415626 | 3.1:-54857652 | None:intergenic |
GGATTGTTCTCCATTGTTGC+AGG | 0.417343 | 3.1:+54857686 | MS.gene008280:CDS |
GTCAATTGCAAAACATAAAC+AGG | 0.426258 | 3.1:-54857543 | None:intergenic |
GAAGTCCTATCACAATTAGA+AGG | 0.426705 | 3.1:-54858515 | None:intergenic |
CTAACAGCACTATCAAAATC+AGG | 0.428623 | 3.1:+54856715 | MS.gene008280:CDS |
AATGAAGAGCTTCTAGCAAT+TGG | 0.431558 | 3.1:+54856763 | MS.gene008280:CDS |
AATGTGATGGTGCAGGGGCA+GGG | 0.433832 | 3.1:-54858449 | None:intergenic |
GAGTCCATGCAGTCATAGTA+AGG | 0.440993 | 3.1:-54857123 | None:intergenic |
GAATCAAGTATGATGGTAGA+AGG | 0.444776 | 3.1:-54856994 | None:intergenic |
TACAACGAGGACAAACAGCC+AGG | 0.445369 | 3.1:+54857474 | MS.gene008280:CDS |
CCATTTATTGGGGTGAACAT+TGG | 0.447812 | 3.1:+54856592 | MS.gene008280:CDS |
TGATTCATTTCCACCTTCAC+AGG | 0.448300 | 3.1:+54857011 | MS.gene008280:CDS |
AAGCATGTGTTGAATAAAAC+CGG | 0.449451 | 3.1:+54857402 | MS.gene008280:CDS |
GCATTGACAAGTGTTGCATT+AGG | 0.454856 | 3.1:-54857354 | None:intergenic |
ATAGATTGGGCTTGTGGACC+TGG | 0.458565 | 3.1:+54857657 | MS.gene008280:CDS |
CCGGAACTCCAAAGCGCCCC+GGG | 0.463307 | 3.1:+54857421 | MS.gene008280:CDS |
ACTCCAAAGCGCCCCGGGAT+TGG | 0.468053 | 3.1:+54857426 | MS.gene008280:CDS |
ATAGTGCTGTTAGCATAGCT+TGG | 0.468643 | 3.1:-54856705 | None:intergenic |
GAATTCCACAGCTTCAAATT+GGG | 0.472855 | 3.1:+54856792 | MS.gene008280:CDS |
AGCAATCTGTGTTGGTTCTG+AGG | 0.477136 | 3.1:+54856858 | MS.gene008280:CDS |
GATGCTTATTATCATAAGAT+GGG | 0.483558 | 3.1:+54857762 | MS.gene008280:CDS |
CCGGTTTCGGTCACCACCAC+GGG | 0.484683 | 3.1:-54857303 | None:intergenic |
ATTCAGTGATGTGTTAAAGA+AGG | 0.489701 | 3.1:-54857034 | None:intergenic |
TATGACTGCATGGACTCAAA+TGG | 0.493197 | 3.1:+54857129 | MS.gene008280:CDS |
AGGACTTCTAATATTGGAAG+TGG | 0.502042 | 3.1:+54858530 | MS.gene008280:CDS |
ATTGCTGTGATATTTGTGTC+TGG | 0.511110 | 3.1:-54856841 | None:intergenic |
GCTGCAGGCCGGAATAGATT+GGG | 0.515672 | 3.1:+54857644 | MS.gene008280:CDS |
GCCGGAATAGATTGGGCTTG+TGG | 0.517366 | 3.1:+54857651 | MS.gene008280:CDS |
ACCGGAACTCCAAAGCGCCC+CGG | 0.518430 | 3.1:+54857420 | MS.gene008280:CDS |
TGGTGGTGACCGAAACCGGC+TGG | 0.522429 | 3.1:+54857307 | MS.gene008280:CDS |
TGGAAATGAATCAAGTATGA+TGG | 0.522752 | 3.1:-54857001 | None:intergenic |
TCAATAGATTCTTTGTTTGG+TGG | 0.525317 | 3.1:-54857189 | None:intergenic |
ATAAGTACTAACACCAATCC+CGG | 0.532396 | 3.1:-54857439 | None:intergenic |
TCTACTGTTGTGGCTGATGA+AGG | 0.533308 | 3.1:+54855216 | MS.gene008280:CDS |
GGCTTGTGGACCTGGAAAAG+TGG | 0.537036 | 3.1:+54857665 | MS.gene008280:CDS |
TGAAGAGTGCATAATCCAAA+GGG | 0.538133 | 3.1:-54857158 | None:intergenic |
GTGAGGCATGTCTGAGAGAT+CGG | 0.540893 | 3.1:-54856617 | None:intergenic |
TGGGGACTATTTGATTCGAA+TGG | 0.540995 | 3.1:+54857516 | MS.gene008280:CDS |
TTGGGTTTCTCGCAATGTGT+TGG | 0.542236 | 3.1:+54856810 | MS.gene008280:CDS |
ACTTACTGTGTTGCTAAAGA+TGG | 0.553819 | 3.1:+54857606 | MS.gene008280:CDS |
GAAACCGGCTGGCCTTCAAA+AGG | 0.554209 | 3.1:+54857318 | MS.gene008280:CDS |
GATTGTTCTCCATTGTTGCA+GGG | 0.554686 | 3.1:+54857687 | MS.gene008280:CDS |
GTTCTTGTATATTTCCAGGA+AGG | 0.555329 | 3.1:+54858313 | MS.gene008280:CDS |
TGAGTAATGAAGAAGTGTGT+TGG | 0.555345 | 3.1:-54857214 | None:intergenic |
GATTGCAAGAAATCAAGCAT+TGG | 0.564353 | 3.1:-54857069 | None:intergenic |
AGAAACCCAATTTGAAGCTG+TGG | 0.569539 | 3.1:-54856797 | None:intergenic |
AGCAGTGCTACTACTTGAGT+AGG | 0.573355 | 3.1:-54856640 | None:intergenic |
GGTCACCACCACGGGAATGT+TGG | 0.573862 | 3.1:-54857295 | None:intergenic |
TAAGTACTAACACCAATCCC+GGG | 0.577513 | 3.1:-54857438 | None:intergenic |
TGACTTACTTGGATCTGAAG+TGG | 0.578075 | 3.1:-54857829 | None:intergenic |
GATCCAAAGATGCTGCAGGC+CGG | 0.581893 | 3.1:+54857633 | MS.gene008280:CDS |
ACCGGCTGGCCTTCAAAAGG+TGG | 0.585432 | 3.1:+54857321 | MS.gene008280:CDS |
TTACCCTTACTATGACTGCA+TGG | 0.586860 | 3.1:+54857119 | MS.gene008280:CDS |
TTGAAGAGTGCATAATCCAA+AGG | 0.590631 | 3.1:-54857159 | None:intergenic |
GATCAATATTCGATGCGACA+AGG | 0.591217 | 3.1:-54856945 | None:intergenic |
CATTGCAGAACCATTTATTG+GGG | 0.592068 | 3.1:+54856582 | MS.gene008280:intron |
TGCTGATCCAAAGATGCTGC+AGG | 0.594791 | 3.1:+54857629 | MS.gene008280:CDS |
GCCGGTTTCGGTCACCACCA+CGG | 0.596875 | 3.1:-54857304 | None:intergenic |
AATATCACAGCAATCTGTGT+TGG | 0.603144 | 3.1:+54856850 | MS.gene008280:CDS |
ATCAATATTCGATGCGACAA+GGG | 0.606226 | 3.1:-54856944 | None:intergenic |
TTAAAGAAGGCCTGTGAAGG+TGG | 0.612595 | 3.1:-54857021 | None:intergenic |
GCAGTGCTACTACTTGAGTA+GGG | 0.617916 | 3.1:-54856639 | None:intergenic |
GCTACTACTTGAGTAGGGTG+AGG | 0.620961 | 3.1:-54856634 | None:intergenic |
ACATTATCAGGATCATAGCA+TGG | 0.626154 | 3.1:-54857714 | None:intergenic |
AAGCATGAGATAAGATTGAG+TGG | 0.629287 | 3.1:-54857091 | None:intergenic |
ACAACGAGGACAAACAGCCA+GGG | 0.633838 | 3.1:+54857475 | MS.gene008280:CDS |
AGTCCATGCAGTCATAGTAA+GGG | 0.634112 | 3.1:-54857122 | None:intergenic |
AAGAAGAAAATGCATAACCA+TGG | 0.646101 | 3.1:-54855175 | None:intergenic |
AGTATGATGGTAGAAGGAAG+CGG | 0.649247 | 3.1:-54856988 | None:intergenic |
GTGTTAAAGAAGGCCTGTGA+AGG | 0.655577 | 3.1:-54857024 | None:intergenic |
CAACGAGGACAAACAGCCAG+GGG | 0.691863 | 3.1:+54857476 | MS.gene008280:CDS |
TTACACCAACATTCCCGTGG+TGG | 0.695713 | 3.1:+54857290 | MS.gene008280:CDS |
AAATTACACCAACATTCCCG+TGG | 0.711078 | 3.1:+54857287 | MS.gene008280:CDS |
AAGTACTAACACCAATCCCG+GGG | 0.721527 | 3.1:-54857437 | None:intergenic |
TATCTACGAGCTCTACAACG+AGG | 0.790392 | 3.1:+54857461 | MS.gene008280:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | ATCTATTAAATATGATGATA+AGG | + | chr3.1:54856026-54856045 | MS.gene008280:intron | 15.0% |
!! | GTATCAAAATAAAACTATTT+AGG | - | chr3.1:54858044-54858063 | None:intergenic | 15.0% |
!! | TCTATTAAATATGATGATAA+GGG | + | chr3.1:54856027-54856046 | MS.gene008280:intron | 15.0% |
!!! | AATAAAACATGTTTATGTTT+TGG | + | chr3.1:54855324-54855343 | MS.gene008280:intron | 15.0% |
!!! | TTTTTGAGAATTTTTTAACT+CGG | + | chr3.1:54857959-54857978 | MS.gene008280:intron | 15.0% |
!! | ATGTGAGTATTTGAAAAATA+TGG | - | chr3.1:54856210-54856229 | None:intergenic | 20.0% |
!! | CTAAAATAGCTCAAAAAAAT+TGG | + | chr3.1:54855845-54855864 | MS.gene008280:intron | 20.0% |
!! | GAAAGAAAATTCGATAAAAA+AGG | + | chr3.1:54855445-54855464 | MS.gene008280:intron | 20.0% |
!! | TATTCTTGATAAATTATTGC+AGG | + | chr3.1:54856165-54856184 | MS.gene008280:intron | 20.0% |
!! | TATTTGAAAAATATGGTTGA+AGG | - | chr3.1:54856203-54856222 | None:intergenic | 20.0% |
!!! | TTCAAATATAGTCAAGTTTT+CGG | - | chr3.1:54856521-54856540 | None:intergenic | 20.0% |
!!! | TTTTGTTCTTAAATGTGTAA+AGG | + | chr3.1:54856294-54856313 | MS.gene008280:intron | 20.0% |
! | AAAATCCTACAAAAAAAGGT+GGG | - | chr3.1:54855522-54855541 | None:intergenic | 25.0% |
! | AAACATGCTTTCTAACAAAA+GGG | - | chr3.1:54855395-54855414 | None:intergenic | 25.0% |
! | AAGTAAAGTTGAAATGAAGA+TGG | + | chr3.1:54855941-54855960 | MS.gene008280:intron | 25.0% |
! | ACTAATGAAAGATACATTTG+AGG | - | chr3.1:54856427-54856446 | None:intergenic | 25.0% |
! | AGAAAATTCGATAAAAAAGG+AGG | + | chr3.1:54855448-54855467 | MS.gene008280:intron | 25.0% |
! | AGTAAAGTTGAAATGAAGAT+GGG | + | chr3.1:54855942-54855961 | MS.gene008280:intron | 25.0% |
! | ATCCAATTCATATGTATTGT+CGG | - | chr3.1:54858204-54858223 | None:intergenic | 25.0% |
! | ATTAAATATGATGATAAGGG+TGG | + | chr3.1:54856030-54856049 | MS.gene008280:intron | 25.0% |
! | CCAACAAGGAATAATATATA+TGG | - | chr3.1:54855266-54855285 | None:intergenic | 25.0% |
! | CCATATATATTATTCCTTGT+TGG | + | chr3.1:54855263-54855282 | MS.gene008280:intron | 25.0% |
! | GAATCAATAGATTCTTTGTT+TGG | - | chr3.1:54857195-54857214 | None:intergenic | 25.0% |
! | GATGCTTATTATCATAAGAT+GGG | + | chr3.1:54857762-54857781 | MS.gene008280:CDS | 25.0% |
! | TAAACATGCTTTCTAACAAA+AGG | - | chr3.1:54855396-54855415 | None:intergenic | 25.0% |
! | TGATGCTTATTATCATAAGA+TGG | + | chr3.1:54857761-54857780 | MS.gene008280:CDS | 25.0% |
! | TTTCGTAATATCAAAGTGAA+AGG | - | chr3.1:54857855-54857874 | None:intergenic | 25.0% |
!! | AAAGTTTGAAACCCTAATTA+GGG | + | chr3.1:54855658-54855677 | MS.gene008280:intron | 25.0% |
!! | AATGATTTATCGATTGTGAT+TGG | + | chr3.1:54858154-54858173 | MS.gene008280:intron | 25.0% |
!! | AGATGCATTTATGTATGTTT+TGG | - | chr3.1:54856355-54856374 | None:intergenic | 25.0% |
!! | CAAGTTTTCGGTAAAATATA+TGG | - | chr3.1:54856509-54856528 | None:intergenic | 25.0% |
!! | TTCTTTCTTTATTGCACTTT+TGG | - | chr3.1:54855902-54855921 | None:intergenic | 25.0% |
!!! | AAATTTTGGAGAAAATTGGT+AGG | + | chr3.1:54855786-54855805 | MS.gene008280:intron | 25.0% |
!!! | AATTTTGGAGAAAATTGGTA+GGG | + | chr3.1:54855787-54855806 | MS.gene008280:intron | 25.0% |
!!! | GTGTAAATTTTGGAGAAAAT+TGG | + | chr3.1:54855782-54855801 | MS.gene008280:intron | 25.0% |
AAATCCTACAAAAAAAGGTG+GGG | - | chr3.1:54855521-54855540 | None:intergenic | 30.0% | |
AACATGCTTTCTAACAAAAG+GGG | - | chr3.1:54855394-54855413 | None:intergenic | 30.0% | |
AAGCATGTGTTGAATAAAAC+CGG | + | chr3.1:54857402-54857421 | MS.gene008280:CDS | 30.0% | |
AATAGATCTAAATACTGCAG+TGG | - | chr3.1:54856013-54856032 | None:intergenic | 30.0% | |
ACTACATATATCAAACTGTG+AGG | - | chr3.1:54856081-54856100 | None:intergenic | 30.0% | |
AGGATATTCTGAATGATTGT+AGG | + | chr3.1:54858285-54858304 | MS.gene008280:intron | 30.0% | |
ATCACAAAGAGAAAAACACA+AGG | - | chr3.1:54855548-54855567 | None:intergenic | 30.0% | |
ATTCAGTGATGTGTTAAAGA+AGG | - | chr3.1:54857037-54857056 | None:intergenic | 30.0% | |
CAAAATCCTACAAAAAAAGG+TGG | - | chr3.1:54855523-54855542 | None:intergenic | 30.0% | |
CACTTTGATATTACGAAAGA+GGG | + | chr3.1:54857857-54857876 | MS.gene008280:intron | 30.0% | |
CTAATTAGGGTTTCAAACTT+TGG | - | chr3.1:54855659-54855678 | None:intergenic | 30.0% | |
CTACATATATCAAACTGTGA+GGG | - | chr3.1:54856080-54856099 | None:intergenic | 30.0% | |
GGTCAAAATCCTACAAAAAA+AGG | - | chr3.1:54855526-54855545 | None:intergenic | 30.0% | |
GTAAAGTTGAAATGAAGATG+GGG | + | chr3.1:54855943-54855962 | MS.gene008280:intron | 30.0% | |
GTCAATAAATTACACCATCT+CGG | + | chr3.1:54855760-54855779 | MS.gene008280:intron | 30.0% | |
GTCAATTGCAAAACATAAAC+AGG | - | chr3.1:54857546-54857565 | None:intergenic | 30.0% | |
TCACAAAGAGAAAAACACAA+GGG | - | chr3.1:54855547-54855566 | None:intergenic | 30.0% | |
TCACTTTGATATTACGAAAG+AGG | + | chr3.1:54857856-54857875 | MS.gene008280:intron | 30.0% | |
TGGAAATGAATCAAGTATGA+TGG | - | chr3.1:54857004-54857023 | None:intergenic | 30.0% | |
TGTGATAGGACTTCTAATAT+TGG | + | chr3.1:54858524-54858543 | MS.gene008280:CDS | 30.0% | |
! | AAGGAGGTTAATTGTGTTTT+TGG | + | chr3.1:54855464-54855483 | MS.gene008280:intron | 30.0% |
! | ACTAAGACTTTTGCTACATT+TGG | - | chr3.1:54856898-54856917 | None:intergenic | 30.0% |
! | CAAAGTTTGAAACCCTAATT+AGG | + | chr3.1:54855657-54855676 | MS.gene008280:intron | 30.0% |
! | CTAAGACTTTTGCTACATTT+GGG | - | chr3.1:54856897-54856916 | None:intergenic | 30.0% |
! | GTTTATGTTTTGCAATTGAC+AGG | + | chr3.1:54857546-54857565 | MS.gene008280:CDS | 30.0% |
! | TCAATAGATTCTTTGTTTGG+TGG | - | chr3.1:54857192-54857211 | None:intergenic | 30.0% |
! | TGCGTCTTTTATAGTTAGTT+TGG | + | chr3.1:54856400-54856419 | MS.gene008280:intron | 30.0% |
!! | ATTTTGGAGAAAATTGGTAG+GGG | + | chr3.1:54855788-54855807 | MS.gene008280:intron | 30.0% |
!! | GAAAAATGTTTTTACCTTCC+TGG | - | chr3.1:54858330-54858349 | None:intergenic | 30.0% |
!!! | CATGTTTATGTTTTGGTGTT+TGG | + | chr3.1:54855331-54855350 | MS.gene008280:intron | 30.0% |
!!! | GTTTTGGCTTATGATACAAA+AGG | + | chr3.1:54857579-54857598 | MS.gene008280:CDS | 30.0% |
!!! | TCAGAAAAGCTTACTTTTTG+AGG | + | chr3.1:54856132-54856151 | MS.gene008280:intron | 30.0% |
AAAGTGAAAGGTGACTTACT+TGG | - | chr3.1:54857843-54857862 | None:intergenic | 35.0% | |
AACGATGTCAAGCACAAATT+TGG | - | chr3.1:54855591-54855610 | None:intergenic | 35.0% | |
AACTCGATAGAAAAGCTGTT+TGG | - | chr3.1:54855628-54855647 | None:intergenic | 35.0% | |
AAGCATGAGATAAGATTGAG+TGG | - | chr3.1:54857094-54857113 | None:intergenic | 35.0% | |
AATATCACAGCAATCTGTGT+TGG | + | chr3.1:54856850-54856869 | MS.gene008280:CDS | 35.0% | |
AATCGCACAATTGTGATACT+TGG | + | chr3.1:54855874-54855893 | MS.gene008280:intron | 35.0% | |
AATGAAGAGCTTCTAGCAAT+TGG | + | chr3.1:54856763-54856782 | MS.gene008280:CDS | 35.0% | |
AATTAGGGATTTCGCTTTCA+TGG | + | chr3.1:54855673-54855692 | MS.gene008280:intron | 35.0% | |
ACAGAAAAAACACACCAACA+AGG | - | chr3.1:54855280-54855299 | None:intergenic | 35.0% | |
ACATTATCAGGATCATAGCA+TGG | - | chr3.1:54857717-54857736 | None:intergenic | 35.0% | |
ACGATGTCAAGCACAAATTT+GGG | - | chr3.1:54855590-54855609 | None:intergenic | 35.0% | |
ACGCTTGTAAGCGAAAATAT+TGG | - | chr3.1:54858390-54858409 | None:intergenic | 35.0% | |
ACTCGATAGAAAAGCTGTTT+GGG | - | chr3.1:54855627-54855646 | None:intergenic | 35.0% | |
AGAAGCCTTCTAATTGTGAT+AGG | + | chr3.1:54858510-54858529 | MS.gene008280:CDS | 35.0% | |
AGGACTTCTAATATTGGAAG+TGG | + | chr3.1:54858530-54858549 | MS.gene008280:CDS | 35.0% | |
AGGGGACTACAAAATTACAA+AGG | + | chr3.1:54855806-54855825 | MS.gene008280:intron | 35.0% | |
ATAAGTACTAACACCAATCC+CGG | - | chr3.1:54857442-54857461 | None:intergenic | 35.0% | |
ATCAATATTCGATGCGACAA+GGG | - | chr3.1:54856947-54856966 | None:intergenic | 35.0% | |
ATCGCACAATTGTGATACTT+GGG | + | chr3.1:54855875-54855894 | MS.gene008280:intron | 35.0% | |
ATTAGGGATTTCGCTTTCAT+GGG | + | chr3.1:54855674-54855693 | MS.gene008280:intron | 35.0% | |
ATTGCTAGAAGCTCTTCATT+AGG | - | chr3.1:54856763-54856782 | None:intergenic | 35.0% | |
ATTGCTGTGATATTTGTGTC+TGG | - | chr3.1:54856844-54856863 | None:intergenic | 35.0% | |
CATTGCAGAACCATTTATTG+GGG | + | chr3.1:54856582-54856601 | MS.gene008280:intron | 35.0% | |
CATTTATTGGGGTGAACATT+GGG | + | chr3.1:54856593-54856612 | MS.gene008280:CDS | 35.0% | |
CTAACAGCACTATCAAAATC+AGG | + | chr3.1:54856715-54856734 | MS.gene008280:CDS | 35.0% | |
CTAGTATCATAGTCTGACTA+AGG | + | chr3.1:54858265-54858284 | MS.gene008280:intron | 35.0% | |
CTCAAATGGTATAATCCCTT+TGG | + | chr3.1:54857143-54857162 | MS.gene008280:CDS | 35.0% | |
CTCCGACAATACATATGAAT+TGG | + | chr3.1:54858199-54858218 | MS.gene008280:intron | 35.0% | |
GAAAGCGAAATCCCTAATTA+GGG | - | chr3.1:54855672-54855691 | None:intergenic | 35.0% | |
GAAGTCCTATCACAATTAGA+AGG | - | chr3.1:54858518-54858537 | None:intergenic | 35.0% | |
GAATCAAGTATGATGGTAGA+AGG | - | chr3.1:54856997-54857016 | None:intergenic | 35.0% | |
GAATTCCACAGCTTCAAATT+GGG | + | chr3.1:54856792-54856811 | MS.gene008280:CDS | 35.0% | |
GATTGCAAGAAATCAAGCAT+TGG | - | chr3.1:54857072-54857091 | None:intergenic | 35.0% | |
GCATCTTTCGTTAGTCAATT+TGG | + | chr3.1:54856369-54856388 | MS.gene008280:intron | 35.0% | |
GCATTGCAGAACCATTTATT+GGG | + | chr3.1:54856581-54856600 | MS.gene008280:intron | 35.0% | |
GCATTGTCAGAGAAAAATTG+GGG | + | chr3.1:54857498-54857517 | MS.gene008280:CDS | 35.0% | |
GGCATTGTCAGAGAAAAATT+GGG | + | chr3.1:54857497-54857516 | MS.gene008280:CDS | 35.0% | |
GGGACTACAAAATTACAAAG+GGG | + | chr3.1:54855808-54855827 | MS.gene008280:intron | 35.0% | |
GGGGACTACAAAATTACAAA+GGG | + | chr3.1:54855807-54855826 | MS.gene008280:intron | 35.0% | |
GTTCTTGTATATTTCCAGGA+AGG | + | chr3.1:54858313-54858332 | MS.gene008280:CDS | 35.0% | |
TCGGTAAAATATATGGAACG+AGG | - | chr3.1:54856502-54856521 | None:intergenic | 35.0% | |
TGAAAGCGAAATCCCTAATT+AGG | - | chr3.1:54855673-54855692 | None:intergenic | 35.0% | |
TGCATTGCAGAACCATTTAT+TGG | + | chr3.1:54856580-54856599 | MS.gene008280:intron | 35.0% | |
TGGTGTTTGGATATTGCATT+AGG | + | chr3.1:54855344-54855363 | MS.gene008280:intron | 35.0% | |
TTCTGAATGATTGTAGGTCA+CGG | + | chr3.1:54858291-54858310 | MS.gene008280:intron | 35.0% | |
TTGCTAGAAGCTCTTCATTA+GGG | - | chr3.1:54856762-54856781 | None:intergenic | 35.0% | |
TTTAGGCAAAATTGCACTTG+CGG | - | chr3.1:54858027-54858046 | None:intergenic | 35.0% | |
! | ACTTACTGTGTTGCTAAAGA+TGG | + | chr3.1:54857606-54857625 | MS.gene008280:CDS | 35.0% |
! | ATAAATGGTTCTGCAATGCA+AGG | - | chr3.1:54856580-54856599 | None:intergenic | 35.0% |
! | GATTCTTTGTTTGGTGGAAT+TGG | - | chr3.1:54857186-54857205 | None:intergenic | 35.0% |
! | TGAAGAGTGCATAATCCAAA+GGG | - | chr3.1:54857161-54857180 | None:intergenic | 35.0% |
! | TGAGTAATGAAGAAGTGTGT+TGG | - | chr3.1:54857217-54857236 | None:intergenic | 35.0% |
! | TTGAAGAGTGCATAATCCAA+AGG | - | chr3.1:54857162-54857181 | None:intergenic | 35.0% |
! | TTTTGCAGTATCTACTGTTG+TGG | + | chr3.1:54855206-54855225 | MS.gene008280:CDS | 35.0% |
! | TTTTGCTACATTTGGGAGTA+TGG | - | chr3.1:54856890-54856909 | None:intergenic | 35.0% |
!! | CGGTCACATTAGTGTTTTTA+AGG | + | chr3.1:54857979-54857998 | MS.gene008280:intron | 35.0% |
AAATTACACCAACATTCCCG+TGG | + | chr3.1:54857287-54857306 | MS.gene008280:CDS | 40.0% | |
AGTATGATGGTAGAAGGAAG+CGG | - | chr3.1:54856991-54857010 | None:intergenic | 40.0% | |
AGTCCATGCAGTCATAGTAA+GGG | - | chr3.1:54857125-54857144 | None:intergenic | 40.0% | |
AGTGTTGCATTAGGCTCATT+AGG | - | chr3.1:54857348-54857367 | None:intergenic | 40.0% | |
ATTCAGCGTCTCACACATTT+GGG | + | chr3.1:54856459-54856478 | MS.gene008280:intron | 40.0% | |
CACGGTTCTTGTATATTTCC+AGG | + | chr3.1:54858309-54858328 | MS.gene008280:CDS | 40.0% | |
CCAATGTTCACCCCAATAAA+TGG | - | chr3.1:54856595-54856614 | None:intergenic | 40.0% | |
CCATTTATTGGGGTGAACAT+TGG | + | chr3.1:54856592-54856611 | MS.gene008280:CDS | 40.0% | |
CGAATTCCACAGCTTCAAAT+TGG | + | chr3.1:54856791-54856810 | MS.gene008280:CDS | 40.0% | |
CGATGTCAAGCACAAATTTG+GGG | - | chr3.1:54855589-54855608 | None:intergenic | 40.0% | |
CTCCAAAATTTACACCGAGA+TGG | - | chr3.1:54855777-54855796 | None:intergenic | 40.0% | |
GACTTTCTTGAATAGCACTG+AGG | + | chr3.1:54855986-54856005 | MS.gene008280:intron | 40.0% | |
GATCAATATTCGATGCGACA+AGG | - | chr3.1:54856948-54856967 | None:intergenic | 40.0% | |
GATGTCAAGCACAAATTTGG+GGG | - | chr3.1:54855588-54855607 | None:intergenic | 40.0% | |
GATTGTTCTCCATTGTTGCA+GGG | + | chr3.1:54857687-54857706 | MS.gene008280:CDS | 40.0% | |
GCATGAGCAACAACATTATC+AGG | - | chr3.1:54857729-54857748 | None:intergenic | 40.0% | |
TAAGTACTAACACCAATCCC+GGG | - | chr3.1:54857441-54857460 | None:intergenic | 40.0% | |
TACAAAGGGGAAAAACACGA+GGG | + | chr3.1:54855821-54855840 | MS.gene008280:intron | 40.0% | |
TATGACTGCATGGACTCAAA+TGG | + | chr3.1:54857129-54857148 | MS.gene008280:CDS | 40.0% | |
TCGCACAATTGTGATACTTG+GGG | + | chr3.1:54855876-54855895 | MS.gene008280:intron | 40.0% | |
TGACTTACTTGGATCTGAAG+TGG | - | chr3.1:54857832-54857851 | None:intergenic | 40.0% | |
TGATTCATTTCCACCTTCAC+AGG | + | chr3.1:54857011-54857030 | MS.gene008280:CDS | 40.0% | |
TTACAAAGGGGAAAAACACG+AGG | + | chr3.1:54855820-54855839 | MS.gene008280:intron | 40.0% | |
TTACCCTTACTATGACTGCA+TGG | + | chr3.1:54857119-54857138 | MS.gene008280:CDS | 40.0% | |
TTGCACCCAGAAAAATGTGA+TGG | - | chr3.1:54858465-54858484 | None:intergenic | 40.0% | |
TTTGTGGTTATGTGCAGTCT+CGG | + | chr3.1:54858414-54858433 | MS.gene008280:intron | 40.0% | |
! | AGAAAAATGTGATGGTGCAG+GGG | - | chr3.1:54858457-54858476 | None:intergenic | 40.0% |
! | AGAAACCCAATTTGAAGCTG+TGG | - | chr3.1:54856800-54856819 | None:intergenic | 40.0% |
! | ATAGTGCTGTTAGCATAGCT+TGG | - | chr3.1:54856708-54856727 | None:intergenic | 40.0% |
! | CAGAAAAATGTGATGGTGCA+GGG | - | chr3.1:54858458-54858477 | None:intergenic | 40.0% |
! | CTGCACCATCACATTTTTCT+GGG | + | chr3.1:54858457-54858476 | MS.gene008280:CDS | 40.0% |
! | GCATTGACAAGTGTTGCATT+AGG | - | chr3.1:54857357-54857376 | None:intergenic | 40.0% |
! | GCTTGATCGTTTTCCAGTAT+TGG | + | chr3.1:54857905-54857924 | MS.gene008280:intron | 40.0% |
! | GGGCATTGTCAGAGAAAAAT+TGG | + | chr3.1:54857496-54857515 | MS.gene008280:CDS | 40.0% |
! | GTTTTGCAATTGACAGGTTC+AGG | + | chr3.1:54857552-54857571 | MS.gene008280:CDS | 40.0% |
! | TCATTAGGACCACCTTTTGA+AGG | - | chr3.1:54857333-54857352 | None:intergenic | 40.0% |
! | TGGGGACTATTTGATTCGAA+TGG | + | chr3.1:54857516-54857535 | MS.gene008280:CDS | 40.0% |
!! | CACCATCTCGGTGTAAATTT+TGG | + | chr3.1:54855772-54855791 | MS.gene008280:intron | 40.0% |
!! | GCTTACAAGCGTTTGATTTG+TGG | + | chr3.1:54858398-54858417 | MS.gene008280:intron | 40.0% |
!!! | CGCTTTCATGGGTGATTTTT+TGG | + | chr3.1:54855685-54855704 | MS.gene008280:intron | 40.0% |
!!! | TTAGCCCCACCTTTTTTTGT+AGG | + | chr3.1:54855514-54855533 | MS.gene008280:intron | 40.0% |
AAGTACTAACACCAATCCCG+GGG | - | chr3.1:54857440-54857459 | None:intergenic | 45.0% | |
ACAAAGGGGAAAAACACGAG+GGG | + | chr3.1:54855822-54855841 | MS.gene008280:intron | 45.0% | |
ACACAATCGCGATACTTGAG+GGG | - | chr3.1:54855490-54855509 | None:intergenic | 45.0% | |
CACACAATCGCGATACTTGA+GGG | - | chr3.1:54855491-54855510 | None:intergenic | 45.0% | |
CATTCAGCGTCTCACACATT+TGG | + | chr3.1:54856458-54856477 | MS.gene008280:intron | 45.0% | |
GAAATGAAGATGGGGCAGAT+AGG | + | chr3.1:54855951-54855970 | MS.gene008280:intron | 45.0% | |
GAGACTTCAAGGACCAATAC+TGG | - | chr3.1:54857921-54857940 | None:intergenic | 45.0% | |
GAGTCCATGCAGTCATAGTA+AGG | - | chr3.1:54857126-54857145 | None:intergenic | 45.0% | |
GGATACATTGTCGTACCTGA+AGG | + | chr3.1:54858000-54858019 | MS.gene008280:intron | 45.0% | |
GGATTGTTCTCCATTGTTGC+AGG | + | chr3.1:54857686-54857705 | MS.gene008280:CDS | 45.0% | |
GTGTTAAAGAAGGCCTGTGA+AGG | - | chr3.1:54857027-54857046 | None:intergenic | 45.0% | |
TATCTACGAGCTCTACAACG+AGG | + | chr3.1:54857461-54857480 | MS.gene008280:CDS | 45.0% | |
TCACACAATCGCGATACTTG+AGG | - | chr3.1:54855492-54855511 | None:intergenic | 45.0% | |
TCCACAAGCCCAATCTATTC+CGG | - | chr3.1:54857655-54857674 | None:intergenic | 45.0% | |
TCTACTGTTGTGGCTGATGA+AGG | + | chr3.1:54855216-54855235 | MS.gene008280:CDS | 45.0% | |
TTAAAGAAGGCCTGTGAAGG+TGG | - | chr3.1:54857024-54857043 | None:intergenic | 45.0% | |
TTCAGCGTCTCACACATTTG+GGG | + | chr3.1:54856460-54856479 | MS.gene008280:intron | 45.0% | |
TTGGGTTTCTCGCAATGTGT+TGG | + | chr3.1:54856810-54856829 | MS.gene008280:CDS | 45.0% | |
! | AGCAGTGCTACTACTTGAGT+AGG | - | chr3.1:54856643-54856662 | None:intergenic | 45.0% |
! | CATGGTTTTCCCTGCAACAA+TGG | - | chr3.1:54857699-54857718 | None:intergenic | 45.0% |
! | CCAGAAAAATGTGATGGTGC+AGG | - | chr3.1:54858459-54858478 | None:intergenic | 45.0% |
! | CCTGCACCATCACATTTTTC+TGG | + | chr3.1:54858456-54858475 | MS.gene008280:CDS | 45.0% |
! | GACGTGTTACTCAACTCTCA+TGG | - | chr3.1:54855743-54855762 | None:intergenic | 45.0% |
! | GCAGTGCTACTACTTGAGTA+GGG | - | chr3.1:54856642-54856661 | None:intergenic | 45.0% |
! | TTTTTCTCTGACAATGCCCC+TGG | - | chr3.1:54857495-54857514 | None:intergenic | 45.0% |
!! | AGCAATCTGTGTTGGTTCTG+AGG | + | chr3.1:54856858-54856877 | MS.gene008280:CDS | 45.0% |
!! | GGAGAACAATCCACTTTTCC+AGG | - | chr3.1:54857678-54857697 | None:intergenic | 45.0% |
!!! | GTGCACGTTTTGAGACTTCA+AGG | - | chr3.1:54857932-54857951 | None:intergenic | 45.0% |
AATTGCACTTGCGGTCCTTC+AGG | - | chr3.1:54858018-54858037 | None:intergenic | 50.0% | |
ACAACGAGGACAAACAGCCA+GGG | + | chr3.1:54857475-54857494 | MS.gene008280:CDS | 50.0% | |
ATAGATTGGGCTTGTGGACC+TGG | + | chr3.1:54857657-54857676 | MS.gene008280:CDS | 50.0% | |
GCTACTACTTGAGTAGGGTG+AGG | - | chr3.1:54856637-54856656 | None:intergenic | 50.0% | |
GTGAGGCATGTCTGAGAGAT+CGG | - | chr3.1:54856620-54856639 | None:intergenic | 50.0% | |
TACAACGAGGACAAACAGCC+AGG | + | chr3.1:54857474-54857493 | MS.gene008280:CDS | 50.0% | |
TGCTGATCCAAAGATGCTGC+AGG | + | chr3.1:54857629-54857648 | MS.gene008280:CDS | 50.0% | |
TTACACCAACATTCCCGTGG+TGG | + | chr3.1:54857290-54857309 | MS.gene008280:CDS | 50.0% | |
! | GACAGGTTCAGGTGCAGTTT+TGG | + | chr3.1:54857563-54857582 | MS.gene008280:CDS | 50.0% |
!! | TTTTGAAGGCCAGCCGGTTT+CGG | - | chr3.1:54857319-54857338 | None:intergenic | 50.0% |
ATTCCGGCCTGCAGCATCTT+TGG | - | chr3.1:54857639-54857658 | None:intergenic | 55.0% | |
CAACGAGGACAAACAGCCAG+GGG | + | chr3.1:54857476-54857495 | MS.gene008280:CDS | 55.0% | |
GATCCAAAGATGCTGCAGGC+CGG | + | chr3.1:54857633-54857652 | MS.gene008280:CDS | 55.0% | |
GCCGGAATAGATTGGGCTTG+TGG | + | chr3.1:54857651-54857670 | MS.gene008280:CDS | 55.0% | |
GCTGCAGGCCGGAATAGATT+GGG | + | chr3.1:54857644-54857663 | MS.gene008280:CDS | 55.0% | |
GGCTTGTGGACCTGGAAAAG+TGG | + | chr3.1:54857665-54857684 | MS.gene008280:CDS | 55.0% | |
TGCTGCAGGCCGGAATAGAT+TGG | + | chr3.1:54857643-54857662 | MS.gene008280:CDS | 55.0% | |
! | AAATGTGATGGTGCAGGGGC+AGG | - | chr3.1:54858453-54858472 | None:intergenic | 55.0% |
! | AATGTGATGGTGCAGGGGCA+GGG | - | chr3.1:54858452-54858471 | None:intergenic | 55.0% |
!! | ACCACCTTTTGAAGGCCAGC+CGG | - | chr3.1:54857325-54857344 | None:intergenic | 55.0% |
!! | GAAACCGGCTGGCCTTCAAA+AGG | + | chr3.1:54857318-54857337 | MS.gene008280:CDS | 55.0% |
GGTCACCACCACGGGAATGT+TGG | - | chr3.1:54857298-54857317 | None:intergenic | 60.0% | |
! | ATGTGATGGTGCAGGGGCAG+GGG | - | chr3.1:54858451-54858470 | None:intergenic | 60.0% |
!! | ACCGGCTGGCCTTCAAAAGG+TGG | + | chr3.1:54857321-54857340 | MS.gene008280:CDS | 60.0% |
CCGGTTTCGGTCACCACCAC+GGG | - | chr3.1:54857306-54857325 | None:intergenic | 65.0% | |
! | ACACCAATCCCGGGGCGCTT+TGG | - | chr3.1:54857432-54857451 | None:intergenic | 65.0% |
! | ACCGGAACTCCAAAGCGCCC+CGG | + | chr3.1:54857420-54857439 | MS.gene008280:CDS | 65.0% |
! | ACTCCAAAGCGCCCCGGGAT+TGG | + | chr3.1:54857426-54857445 | MS.gene008280:CDS | 65.0% |
! | CCCGTGGTGGTGACCGAAAC+CGG | + | chr3.1:54857303-54857322 | MS.gene008280:CDS | 65.0% |
! | GCCGGTTTCGGTCACCACCA+CGG | - | chr3.1:54857307-54857326 | None:intergenic | 65.0% |
! | TGGTGGTGACCGAAACCGGC+TGG | + | chr3.1:54857307-54857326 | MS.gene008280:CDS | 65.0% |
! | CCGGAACTCCAAAGCGCCCC+GGG | + | chr3.1:54857421-54857440 | MS.gene008280:CDS | 70.0% |
!! | CCCGGGGCGCTTTGGAGTTC+CGG | - | chr3.1:54857424-54857443 | None:intergenic | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr3.1 | gene | 54855177 | 54858563 | 54855177 | ID=MS.gene008280 |
chr3.1 | mRNA | 54855177 | 54858563 | 54855177 | ID=MS.gene008280.t1;Parent=MS.gene008280 |
chr3.1 | exon | 54855177 | 54855237 | 54855177 | ID=MS.gene008280.t1.exon1;Parent=MS.gene008280.t1 |
chr3.1 | CDS | 54855177 | 54855237 | 54855177 | ID=cds.MS.gene008280.t1;Parent=MS.gene008280.t1 |
chr3.1 | exon | 54856590 | 54857843 | 54856590 | ID=MS.gene008280.t1.exon2;Parent=MS.gene008280.t1 |
chr3.1 | CDS | 54856590 | 54857843 | 54856590 | ID=cds.MS.gene008280.t1;Parent=MS.gene008280.t1 |
chr3.1 | exon | 54858307 | 54858334 | 54858307 | ID=MS.gene008280.t1.exon3;Parent=MS.gene008280.t1 |
chr3.1 | CDS | 54858307 | 54858334 | 54858307 | ID=cds.MS.gene008280.t1;Parent=MS.gene008280.t1 |
chr3.1 | exon | 54858431 | 54858563 | 54858431 | ID=MS.gene008280.t1.exon4;Parent=MS.gene008280.t1 |
chr3.1 | CDS | 54858431 | 54858563 | 54858431 | ID=cds.MS.gene008280.t1;Parent=MS.gene008280.t1 |
Gene Sequence |
Protein sequence |