AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene045397

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene045397.t1 MTR_3g083580 96.386 498 17 1 1 497 1 498 0.0 1000
MS.gene045397.t1 MTR_8g085720 71.457 501 135 5 1 497 1 497 0.0 743
MS.gene045397.t1 MTR_3g065460 49.663 445 221 2 11 453 9 452 1.43e-166 480
MS.gene045397.t1 MTR_1g031900 51.636 428 204 2 24 449 22 448 1.14e-165 478
MS.gene045397.t1 MTR_5g078200 51.756 427 203 2 25 449 22 447 3.16e-165 482
MS.gene045397.t1 MTR_1g031900 50.000 444 219 2 24 465 22 464 7.83e-165 476
MS.gene045397.t1 MTR_5g078200 51.325 415 199 2 37 449 1 414 2.91e-158 463
MS.gene045397.t1 MTR_4g132280 49.885 433 214 2 23 453 42 473 8.76e-158 459
MS.gene045397.t1 MTR_6g088885 36.226 461 275 6 6 454 9 462 1.22e-113 345
MS.gene045397.t1 MTR_1g056640 36.543 457 250 5 26 446 38 490 1.50e-108 332
MS.gene045397.t1 MTR_5g085580 35.874 446 257 5 26 446 25 466 4.06e-104 319
MS.gene045397.t1 MTR_8g102340 35.520 442 239 6 23 456 25 428 6.34e-97 301
MS.gene045397.t1 MTR_4g069940 35.147 441 268 5 24 450 27 463 6.69e-92 288
MS.gene045397.t1 MTR_3g116510 35.845 438 265 6 24 450 26 458 2.12e-90 284
MS.gene045397.t1 MTR_1g022160 34.716 458 261 7 25 448 23 476 7.28e-90 283
MS.gene045397.t1 MTR_8g012400 34.180 433 268 7 27 446 30 458 1.57e-89 281
MS.gene045397.t1 MTR_7g053500 33.790 438 266 8 27 446 27 458 3.77e-88 278
MS.gene045397.t1 MTR_4g088155 34.615 442 261 8 26 446 23 457 6.33e-88 277
MS.gene045397.t1 MTR_1g022160 34.205 459 264 7 25 449 23 477 3.34e-87 276
MS.gene045397.t1 MTR_1g022160 34.298 449 257 7 25 439 23 467 1.10e-84 270
MS.gene045397.t1 MTR_4g083500 34.667 450 257 10 26 446 44 485 8.10e-81 261
MS.gene045397.t1 MTR_3g080410 38.110 328 198 3 23 349 23 346 1.75e-80 255
MS.gene045397.t1 MTR_7g026340 34.554 437 255 13 26 444 23 446 1.11e-78 253
MS.gene045397.t1 MTR_7g053500 34.456 386 229 8 79 446 2 381 9.38e-77 246
MS.gene045397.t1 MTR_4g084480 36.827 353 216 5 24 375 23 369 2.18e-75 243
MS.gene045397.t1 MTR_4g084480 38.658 313 187 3 24 335 30 338 2.28e-75 243
MS.gene045397.t1 MTR_4g084480 38.658 313 187 3 24 335 30 338 4.49e-75 242
MS.gene045397.t1 MTR_8g012400 33.773 379 234 7 81 446 4 378 3.93e-74 239
MS.gene045397.t1 MTR_1g077990 37.231 325 197 5 26 349 31 349 7.32e-72 234
MS.gene045397.t1 MTR_4g010200 36.812 345 208 5 11 349 13 353 5.09e-71 231
MS.gene045397.t1 MTR_2g086530 36.364 330 202 5 23 351 5 327 8.62e-69 224
MS.gene045397.t1 MTR_2g086530 36.923 325 197 5 23 346 26 343 1.08e-68 225
MS.gene045397.t1 MTR_2g019345 35.952 331 206 4 6 335 4 329 1.25e-68 225
MS.gene045397.t1 MTR_4g052970 35.385 325 200 5 23 344 26 343 6.52e-68 223
MS.gene045397.t1 MTR_1g007810 38.019 313 183 6 26 335 16 320 1.17e-66 219
MS.gene045397.t1 MTR_1g022160 36.449 321 200 4 25 344 23 340 1.68e-66 220
MS.gene045397.t1 MTR_4g114850 34.862 327 208 3 27 352 27 349 8.81e-66 217
MS.gene045397.t1 MTR_4g114850 34.862 327 208 3 27 352 27 349 1.10e-65 216
MS.gene045397.t1 MTR_4g114850 34.862 327 208 3 27 352 27 349 1.93e-65 216
MS.gene045397.t1 MTR_3g116510 35.866 329 196 5 132 450 1 324 6.35e-64 211
MS.gene045397.t1 MTR_1g053320 30.617 454 285 14 9 444 13 454 2.24e-61 209
MS.gene045397.t1 MTR_3g108600 31.881 436 251 16 26 446 31 435 3.73e-60 205
MS.gene045397.t1 MTR_1g010120 29.935 461 295 16 1 446 1 448 2.98e-59 202
MS.gene045397.t1 MTR_4g076500 31.481 324 211 2 26 349 78 390 1.81e-55 190
MS.gene045397.t1 MTR_4g076490 32.903 310 193 5 26 335 97 391 6.57e-55 190
MS.gene045397.t1 MTR_2g034440 32.831 332 200 7 24 348 20 335 7.91e-55 187
MS.gene045397.t1 MTR_4g112025 29.186 442 282 15 23 446 28 456 3.02e-54 190
MS.gene045397.t1 MTR_7g081350 31.579 342 217 9 9 346 7 335 3.05e-54 186
MS.gene045397.t1 MTR_2g027560 30.046 436 273 16 26 444 28 448 4.21e-54 189
MS.gene045397.t1 MTR_4g076430 33.538 325 197 9 26 349 23 329 4.75e-54 185
MS.gene045397.t1 MTR_4g076570 32.903 310 199 4 26 335 22 322 5.91e-54 186
MS.gene045397.t1 MTR_4g076470 33.025 324 200 7 26 349 23 329 9.00e-54 184
MS.gene045397.t1 MTR_4g124440 28.664 464 296 18 1 444 1 449 4.71e-53 186
MS.gene045397.t1 MTR_4g076440 32.716 324 201 7 26 349 23 329 1.82e-52 181
MS.gene045397.t1 MTR_4g076255 33.642 324 198 7 26 349 25 331 2.30e-52 180
MS.gene045397.t1 MTR_2g034470 32.432 333 201 7 24 349 28 343 5.83e-52 180
MS.gene045397.t1 MTR_8g092070 29.047 451 286 17 26 455 34 471 2.83e-51 184
MS.gene045397.t1 MTR_2g034480 32.164 342 216 9 11 348 10 339 5.84e-51 177
MS.gene045397.t1 MTR_2g034470 32.399 321 193 7 36 349 5 308 8.83e-51 176
MS.gene045397.t1 MTR_7g085390 29.274 468 286 20 4 446 3 450 2.16e-49 176
MS.gene045397.t1 MTR_1g052430 31.290 310 204 4 26 335 32 332 2.46e-49 174
MS.gene045397.t1 MTR_3g031770 30.068 439 269 15 26 446 27 445 8.36e-48 172
MS.gene045397.t1 MTR_3g095050 29.806 463 284 22 7 446 11 455 1.32e-47 172
MS.gene045397.t1 MTR_7g081370 30.409 342 209 10 6 346 10 323 1.22e-46 165
MS.gene045397.t1 MTR_6g032820 29.176 425 266 17 26 429 26 436 2.14e-44 162
MS.gene045397.t1 MTR_5g081720 33.016 315 199 9 42 353 53 358 7.00e-39 145
MS.gene045397.t1 MTR_4g134280 29.683 347 217 14 114 446 3 336 1.07e-35 137
MS.gene045397.t1 MTR_5g097420 50.588 85 42 0 362 446 30 114 3.69e-26 103
MS.gene045397.t1 MTR_4g133730 42.574 101 53 1 346 446 17 112 2.13e-24 98.2
MS.gene045397.t1 MTR_8g089400 47.126 87 46 0 361 447 36 122 7.99e-23 95.1
MS.gene045397.t1 MTR_8g089400 47.126 87 46 0 361 447 56 142 2.34e-22 94.7
MS.gene045397.t1 MTR_8g085390 38.931 131 71 2 359 481 27 156 5.30e-22 94.0
MS.gene045397.t1 MTR_4g133735 41.584 101 54 1 346 446 17 112 7.12e-22 91.3
MS.gene045397.t1 MTR_4g079530 40.323 124 68 2 362 485 37 154 4.62e-21 90.9
MS.gene045397.t1 MTR_3g048280 41.509 106 61 1 341 446 91 195 2.73e-20 89.4
MS.gene045397.t1 MTR_5g091650 45.361 97 52 1 358 454 104 199 5.69e-20 90.1
MS.gene045397.t1 MTR_4g079530 44.706 85 47 0 362 446 37 121 1.16e-19 85.1
MS.gene045397.t1 MTR_5g091650 47.191 89 46 1 358 446 104 191 1.48e-19 87.0
MS.gene045397.t1 MTR_4g083070 43.519 108 56 3 343 449 5 108 4.35e-19 85.9
MS.gene045397.t1 MTR_4g109490 49.438 89 43 2 358 446 20 106 7.37e-19 85.9
MS.gene045397.t1 MTR_2g049670 46.739 92 47 2 362 453 158 247 8.22e-19 87.8
MS.gene045397.t1 MTR_5g015720 45.455 88 47 1 360 446 327 414 2.58e-18 87.4
MS.gene045397.t1 MTR_8g085400 42.697 89 47 2 352 440 23 107 3.02e-18 80.9
MS.gene045397.t1 MTR_7g111600 42.353 85 48 1 362 446 160 243 3.78e-18 84.7
MS.gene045397.t1 MTR_7g111600 42.353 85 48 1 362 446 160 243 4.88e-18 85.1
MS.gene045397.t1 MTR_7g111600 42.353 85 48 1 362 446 160 243 8.40e-18 84.7
MS.gene045397.t1 MTR_1g084820 45.783 83 43 2 360 442 418 498 1.27e-17 86.3
MS.gene045397.t1 MTR_1g084820 45.783 83 43 2 360 442 418 498 1.28e-17 86.3
MS.gene045397.t1 MTR_8g088120 46.835 79 41 1 374 452 60 137 7.36e-17 80.1
MS.gene045397.t1 MTR_8g085440 39.773 88 52 1 359 446 29 115 1.16e-16 76.3
MS.gene045397.t1 MTR_3g082080 46.835 79 41 1 362 440 157 234 1.16e-16 80.1
MS.gene045397.t1 MTR_1g116870 42.169 83 47 1 362 444 276 357 1.42e-16 81.6
MS.gene045397.t1 MTR_5g044530 41.111 90 50 2 362 449 22 110 8.46e-16 77.8
MS.gene045397.t1 MTR_2g072500 36.264 91 56 1 357 447 3 91 2.13e-14 69.3
MS.gene045397.t1 MTR_8g085420 36.905 84 52 1 359 442 29 111 8.57e-14 68.9
MS.gene045397.t1 MTR_4g036775 41.573 89 46 3 259 347 94 176 8.22e-13 68.2
MS.gene045397.t1 MTR_4g036680 43.333 90 43 5 259 347 94 176 8.95e-13 68.2
MS.gene045397.t1 MTR_2g449880 67.442 43 14 0 390 432 227 269 3.72e-11 65.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene045397.t1 AT3G13560 61.875 480 180 3 1 479 1 478 0.0 622
MS.gene045397.t1 AT3G13560 61.875 480 180 3 1 479 1 478 0.0 622
MS.gene045397.t1 AT3G13560 61.875 480 180 3 1 479 1 478 0.0 622
MS.gene045397.t1 AT3G13560 61.875 480 180 3 1 479 1 478 0.0 622
MS.gene045397.t1 AT3G13560 61.875 480 180 3 1 479 1 478 0.0 622
MS.gene045397.t1 AT2G01630 50.000 440 215 3 24 459 21 459 2.97e-165 477
MS.gene045397.t1 AT2G01630 50.358 419 205 2 24 440 21 438 3.22e-161 464
MS.gene045397.t1 AT1G66250 46.234 478 247 6 23 497 29 499 8.08e-158 458
MS.gene045397.t1 AT1G11820 49.302 430 215 2 25 452 43 471 6.98e-157 456
MS.gene045397.t1 AT1G11820 49.282 418 209 2 25 440 43 459 1.59e-150 438
MS.gene045397.t1 AT2G01630 50.136 367 180 2 24 388 21 386 2.64e-136 399
MS.gene045397.t1 AT2G05790 39.286 448 241 5 26 446 25 468 4.19e-117 353
MS.gene045397.t1 AT5G56590 39.908 436 245 6 23 446 23 453 5.08e-112 341
MS.gene045397.t1 AT4G29360 36.853 464 257 4 15 446 16 475 4.93e-108 332
MS.gene045397.t1 AT1G11820 48.318 327 168 1 25 351 43 368 1.60e-107 325
MS.gene045397.t1 AT4G29360 36.761 457 253 4 22 446 33 485 4.36e-107 330
MS.gene045397.t1 AT5G55180 36.927 436 258 5 24 446 25 456 4.72e-105 322
MS.gene045397.t1 AT5G55180 37.209 430 253 5 25 441 26 451 9.67e-103 316
MS.gene045397.t1 AT4G26830 35.841 452 274 6 6 446 5 451 1.95e-102 315
MS.gene045397.t1 AT4G26830 36.636 434 259 6 24 446 27 455 1.30e-101 313
MS.gene045397.t1 AT5G24318 36.009 461 267 11 1 446 8 455 2.58e-96 299
MS.gene045397.t1 AT4G34480 38.051 431 250 7 25 446 25 447 1.81e-95 298
MS.gene045397.t1 AT2G16230 36.323 446 266 5 24 461 23 458 1.65e-94 296
MS.gene045397.t1 AT5G24318 35.982 453 262 11 3 440 10 449 5.20e-93 290
MS.gene045397.t1 AT3G07320 33.638 437 266 9 27 446 26 455 2.30e-82 263
MS.gene045397.t1 AT4G14080 31.973 441 279 7 22 446 38 473 7.71e-80 257
MS.gene045397.t1 AT3G55430 33.186 452 270 15 9 446 16 449 3.91e-79 254
MS.gene045397.t1 AT3G23770 32.432 444 276 7 22 446 33 471 2.91e-77 250
MS.gene045397.t1 AT4G34480 38.889 342 192 7 114 446 3 336 1.85e-72 235
MS.gene045397.t1 AT1G32860 36.391 327 200 5 26 349 29 350 3.03e-72 236
MS.gene045397.t1 AT5G24318 36.615 325 184 7 135 446 1 316 7.01e-71 228
MS.gene045397.t1 AT1G30080 36.977 311 191 3 26 335 36 342 3.79e-69 226
MS.gene045397.t1 AT1G30080 36.977 311 191 3 26 335 36 342 8.16e-69 226
MS.gene045397.t1 AT2G27500 34.769 325 207 3 21 344 24 344 4.70e-68 223
MS.gene045397.t1 AT2G27500 34.769 325 207 3 21 344 24 344 6.95e-68 223
MS.gene045397.t1 AT4G18340 34.943 352 219 6 11 358 17 362 1.15e-67 222
MS.gene045397.t1 AT4G18340 34.943 352 219 6 11 358 17 362 3.40e-67 221
MS.gene045397.t1 AT3G15800 37.309 327 197 5 12 335 30 351 2.41e-66 219
MS.gene045397.t1 AT5G42720 37.380 313 191 3 25 335 25 334 3.09e-66 220
MS.gene045397.t1 AT2G26600 34.571 350 217 5 20 361 25 370 4.49e-65 216
MS.gene045397.t1 AT4G34480 36.170 329 205 4 25 352 25 349 9.54e-65 214
MS.gene045397.t1 AT5G24318 35.119 336 204 7 3 335 10 334 1.03e-63 211
MS.gene045397.t1 AT4G16260 36.994 346 205 8 6 351 5 337 9.81e-63 208
MS.gene045397.t1 AT5G42100 34.154 325 205 6 26 346 27 346 3.88e-61 206
MS.gene045397.t1 AT5G42100 34.154 325 205 6 26 346 27 346 5.99e-61 206
MS.gene045397.t1 AT4G16260 37.342 316 186 7 36 351 5 308 1.45e-60 201
MS.gene045397.t1 AT2G39640 32.301 452 265 17 11 444 12 440 4.03e-60 207
MS.gene045397.t1 AT2G39640 31.707 123 80 3 333 452 428 549 9.06e-12 67.8
MS.gene045397.t1 AT3G61810 33.939 330 200 6 26 349 55 372 6.89e-60 202
MS.gene045397.t1 AT4G31140 30.575 435 275 15 26 446 27 448 5.15e-58 199
MS.gene045397.t1 AT3G57270 34.848 330 203 7 20 348 21 339 8.11e-56 190
MS.gene045397.t1 AT5G20870 30.349 458 286 17 11 446 13 459 3.39e-55 192
MS.gene045397.t1 AT5G64790 28.782 476 299 16 11 466 14 469 6.58e-55 191
MS.gene045397.t1 AT5G58090 29.680 438 277 16 26 446 22 445 2.21e-53 187
MS.gene045397.t1 AT2G27500 34.074 270 173 3 76 344 1 266 2.59e-53 182
MS.gene045397.t1 AT2G19440 30.989 455 281 17 10 446 5 444 6.02e-52 183
MS.gene045397.t1 AT2G19440 30.989 455 281 17 10 446 5 444 6.02e-52 183
MS.gene045397.t1 AT3G24330 29.120 443 275 17 26 446 39 464 3.39e-51 182
MS.gene045397.t1 AT3G57260 33.333 339 210 7 11 349 17 339 1.02e-50 176
MS.gene045397.t1 AT3G57260 33.333 339 210 7 11 349 33 355 2.06e-50 176
MS.gene045397.t1 AT4G17180 30.512 449 277 17 13 446 12 440 2.17e-50 179
MS.gene045397.t1 AT5G58480 30.435 460 275 19 7 447 12 445 7.05e-50 177
MS.gene045397.t1 AT2G26600 35.165 273 168 4 94 361 8 276 8.20e-50 172
MS.gene045397.t1 AT1G64760 30.635 457 279 17 10 444 6 446 1.25e-49 177
MS.gene045397.t1 AT1G64760 30.635 457 279 17 10 444 6 446 1.25e-49 177
MS.gene045397.t1 AT3G46570 34.627 335 204 11 26 355 27 351 1.32e-48 171
MS.gene045397.t1 AT3G57240 34.516 310 187 8 26 335 35 328 1.63e-48 171
MS.gene045397.t1 AT3G04010 29.705 441 270 20 26 444 33 455 2.59e-48 174
MS.gene045397.t1 AT5G18220 27.564 468 300 18 2 446 4 455 2.90e-47 171
MS.gene045397.t1 AT3G55780 32.915 319 204 8 39 354 48 359 7.79e-45 162
MS.gene045397.t1 AT5G20330 29.721 323 213 7 26 346 34 344 7.13e-44 158
MS.gene045397.t1 AT5G20390 29.310 348 229 8 3 346 9 343 9.88e-44 158
MS.gene045397.t1 AT5G20340 30.462 325 208 9 26 346 43 353 5.15e-43 156
MS.gene045397.t1 AT1G77780 29.697 330 219 9 15 344 14 330 3.95e-42 154
MS.gene045397.t1 AT1G33220 28.239 301 201 6 26 323 34 322 9.08e-41 149
MS.gene045397.t1 AT1G77790 28.402 338 228 8 2 335 4 331 2.98e-40 148
MS.gene045397.t1 AT5G20560 26.061 330 230 8 9 335 16 334 7.81e-35 133
MS.gene045397.t1 AT5G35740 47.191 89 46 1 359 446 27 115 2.44e-26 103
MS.gene045397.t1 AT2G04910 48.193 83 43 0 362 444 15 97 4.76e-24 97.1
MS.gene045397.t1 AT1G66870 37.313 134 67 2 325 446 9 137 5.67e-24 97.8
MS.gene045397.t1 AT1G66870 44.944 89 49 0 358 446 22 110 3.56e-23 94.7
MS.gene045397.t1 AT5G67460 49.412 85 43 0 362 446 293 377 1.57e-22 99.8
MS.gene045397.t1 AT4G13600 40.541 111 64 2 362 472 61 169 9.56e-22 94.4
MS.gene045397.t1 AT2G30933 46.154 91 48 1 360 450 80 169 1.75e-21 93.6
MS.gene045397.t1 AT5G67460 51.899 79 38 0 362 440 293 371 3.04e-21 95.9
MS.gene045397.t1 AT1G66852 43.478 92 51 1 355 446 19 109 3.67e-21 89.0
MS.gene045397.t1 AT1G18650 43.750 96 53 1 356 451 15 109 6.36e-21 90.9
MS.gene045397.t1 AT1G66855 41.573 89 52 0 359 447 23 111 7.09e-21 88.2
MS.gene045397.t1 AT1G18650 43.750 96 53 1 356 451 15 109 1.37e-20 88.2
MS.gene045397.t1 AT5G63240 40.230 87 50 1 362 446 40 126 1.43e-20 87.8
MS.gene045397.t1 AT2G04910 45.679 81 44 0 361 441 14 94 1.49e-20 87.8
MS.gene045397.t1 AT3G58100 39.362 94 57 0 362 455 41 134 3.57e-20 88.6
MS.gene045397.t1 AT3G58100 39.362 94 57 0 362 455 117 210 5.51e-20 90.1
MS.gene045397.t1 AT1G29380 44.444 90 49 1 362 451 148 236 4.08e-19 87.4
MS.gene045397.t1 AT4G16165 38.710 93 57 0 355 447 19 111 4.94e-19 83.2
MS.gene045397.t1 AT4G05430 43.158 95 53 1 361 454 47 141 6.48e-19 84.3
MS.gene045397.t1 AT4G05430 43.158 95 53 1 361 454 22 116 6.65e-19 83.6
MS.gene045397.t1 AT2G30933 46.914 81 42 1 360 440 80 159 7.09e-19 84.0
MS.gene045397.t1 AT2G30933 46.914 81 42 1 360 440 80 159 7.09e-19 84.0
MS.gene045397.t1 AT1G29380 45.783 83 44 1 362 444 148 229 1.28e-18 87.0
MS.gene045397.t1 AT1G09460 44.792 96 50 2 358 453 133 225 4.05e-18 85.9
MS.gene045397.t1 AT5G61130 41.758 91 52 1 356 446 15 104 1.12e-17 82.0
MS.gene045397.t1 AT1G79480 42.529 87 49 1 358 444 307 392 1.61e-17 85.1
MS.gene045397.t1 AT4G09462 38.889 90 54 1 358 447 25 113 1.72e-17 79.0
MS.gene045397.t1 AT1G79480 42.529 87 49 1 358 444 306 391 1.73e-17 84.7
MS.gene045397.t1 AT4G09465 37.500 96 59 1 352 447 21 115 2.70e-17 78.2
MS.gene045397.t1 AT4G09467 37.500 96 59 1 352 447 21 115 2.78e-17 78.2
MS.gene045397.t1 AT4G09464 37.500 96 59 1 352 447 21 115 2.78e-17 78.2
MS.gene045397.t1 AT4G05430 42.500 80 46 0 361 440 47 126 2.16e-16 75.9
MS.gene045397.t1 AT1G29380 43.902 82 45 1 362 443 148 228 2.46e-16 78.6
MS.gene045397.t1 AT1G29380 43.902 82 45 1 362 443 148 228 2.46e-16 78.6
MS.gene045397.t1 AT2G43670 37.079 89 54 1 358 446 31 117 3.92e-16 75.1
MS.gene045397.t1 AT5G63225 39.326 89 53 1 358 446 21 108 5.96e-16 74.3
MS.gene045397.t1 AT4G09466 35.417 96 61 1 352 447 21 115 1.16e-15 73.6
MS.gene045397.t1 AT1G69295 42.222 90 50 2 354 443 13 100 1.71e-15 76.3
MS.gene045397.t1 AT4G09090 38.202 89 54 1 358 446 27 114 2.04e-15 72.8
MS.gene045397.t1 AT5G63250 35.185 108 62 2 341 446 27 128 2.63e-15 73.2
MS.gene045397.t1 AT1G69295 43.373 83 45 2 361 443 16 96 1.39e-14 73.6
MS.gene045397.t1 AT1G26450 45.679 81 42 2 354 434 13 91 1.74e-14 72.4
MS.gene045397.t1 AT2G03505 36.145 83 52 1 358 440 17 98 2.44e-14 70.1
MS.gene045397.t1 AT2G03505 35.106 94 58 2 358 449 17 109 2.81e-14 71.2
MS.gene045397.t1 AT2G03505 35.106 94 58 2 358 449 17 109 2.81e-14 71.2
MS.gene045397.t1 AT2G03505 35.106 94 58 2 358 449 17 109 2.81e-14 71.2
MS.gene045397.t1 AT2G29735 38.889 90 52 2 359 446 28 116 9.08e-14 68.2
MS.gene045397.t1 AT1G78520 35.227 88 55 1 359 446 29 114 1.36e-13 67.8
MS.gene045397.t1 AT5G53600 32.184 87 57 1 360 446 27 111 4.44e-13 66.2
MS.gene045397.t1 AT5G53610 32.584 89 58 1 358 446 24 110 8.13e-13 65.5
MS.gene045397.t1 AT5G63230 35.955 89 56 1 358 446 22 109 1.06e-12 65.1
MS.gene045397.t1 AT5G08000 37.363 91 56 1 356 446 15 104 5.79e-12 65.1
MS.gene045397.t1 AT2G43660 32.558 86 58 0 361 446 34 119 8.82e-12 62.8
MS.gene045397.t1 AT2G43660 32.558 86 58 0 361 446 33 118 9.21e-12 62.8
MS.gene045397.t1 AT5G08000 37.209 86 53 1 361 446 39 123 1.93e-11 63.9
MS.gene045397.t1 AT1G13830 35.632 87 53 2 362 446 35 120 2.37e-11 63.9
MS.gene045397.t1 AT1G13830 35.632 87 53 2 362 446 21 106 2.64e-11 63.2

Find 100 sgRNAs with CRISPR-Local

Find 186 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTAAATGCTCACCCTTATTA+TGG 0.209582 3.4:+78550413 MS.gene045397:CDS
CTCTTCTACTAGTCTACTTT+TGG 0.219586 3.4:+78552241 MS.gene045397:CDS
CCTTTAGTATATCCATAATA+AGG 0.275337 3.4:-78550425 None:intergenic
AGGAGAGTACTTAATGATTC+AGG 0.289249 3.4:+78550704 MS.gene045397:CDS
GCTACTGTAAACAATGTATT+AGG 0.301390 3.4:+78549273 MS.gene045397:CDS
CTTCAACGCCGGTGTTTGAT+AGG 0.307975 3.4:-78550025 None:intergenic
CATTAAATTTCAATGATATA+CGG 0.312439 3.4:+78550585 MS.gene045397:CDS
CCTAATCAAATTATTATTGT+AGG 0.316111 3.4:-78550684 None:intergenic
CGGATCATTGTCACAGAAAC+TGG 0.324873 3.4:+78550605 MS.gene045397:CDS
GAAACTGGTTGGCCACATTT+AGG 0.331009 3.4:+78550620 MS.gene045397:CDS
CCAGCACCAATAGGACTTAC+AGG 0.369992 3.4:-78552182 None:intergenic
ACAAGAACACGAGCAACATT+TGG 0.372068 3.4:-78550197 None:intergenic
TGAAAAGATGGAAGCTGGTT+TGG 0.374705 3.4:+78550937 MS.gene045397:CDS
CCTACAATAATAATTTGATT+AGG 0.390318 3.4:+78550684 MS.gene045397:CDS
CTGGGCTTGCGGAGAAGGCC+GGG 0.392967 3.4:+78550961 MS.gene045397:CDS
ACCTATATCTGAAAGACATT+GGG 0.397818 3.4:+78550799 MS.gene045397:CDS
GACGAAGAAATATTGAGAAT+TGG 0.401023 3.4:+78550065 MS.gene045397:CDS
ACTGGGCTTGCGGAGAAGGC+CGG 0.403590 3.4:+78550960 MS.gene045397:CDS
TTGGACTGGGCTTGCGGAGA+AGG 0.404683 3.4:+78550956 MS.gene045397:CDS
AAACTAGCGTCCGGTTCGTT+AGG 0.408986 3.4:-78550647 None:intergenic
CGAAGTAAAGCATATTCAAT+TGG 0.412645 3.4:-78550461 None:intergenic
AGATGGAAGCTGGTTTGGAC+TGG 0.413864 3.4:+78550942 MS.gene045397:CDS
TTTGGACCTGTAAGTCCTAT+TGG 0.417869 3.4:+78552176 MS.gene045397:CDS
GTAGAAGGAGGAAAAGGCTT+AGG 0.421008 3.4:-78550311 None:intergenic
TTTGATGAAGATAAGAGAAT+AGG 0.422141 3.4:+78550776 MS.gene045397:CDS
GAGTTAAAAGTGGCTGTAGA+AGG 0.422615 3.4:-78550326 None:intergenic
ATAATCATTATAAGCATAAG+AGG 0.428971 3.4:-78551047 None:intergenic
AACTTGAGCACGGGTGGTGA+TGG 0.431835 3.4:+78552134 MS.gene045397:CDS
TATGATGTAGGTGCATTTGT+GGG 0.437475 3.4:+78549882 MS.gene045397:intron
AAACTTTGACGCGGAAATGA+AGG 0.439597 3.4:-78550262 None:intergenic
CAAGAACACGAGCAACATTT+GGG 0.450275 3.4:-78550196 None:intergenic
AACTGTGCAGCTATTCAAGC+TGG 0.464051 3.4:+78550986 MS.gene045397:CDS
CCCCAATGTCTTTCAGATAT+AGG 0.465833 3.4:-78550800 None:intergenic
CCTGTAAGTCCTATTGGTGC+TGG 0.466516 3.4:+78552182 MS.gene045397:CDS
TGACAGTATGTTTGATGCTA+TGG 0.468256 3.4:+78550535 MS.gene045397:CDS
GGCACTGTGAAGATGATTCA+TGG 0.472035 3.4:-78550225 None:intergenic
GATGGAAGCTGGTTTGGACT+GGG 0.472061 3.4:+78550943 MS.gene045397:CDS
GTATGATGTAGGTGCATTTG+TGG 0.481676 3.4:+78549881 MS.gene045397:intron
CTTTAGTATATCCATAATAA+GGG 0.487078 3.4:-78550424 None:intergenic
AATTCTCAATATTTCTTCGT+CGG 0.489082 3.4:-78550063 None:intergenic
GACCTATATCTGAAAGACAT+TGG 0.495328 3.4:+78550798 MS.gene045397:CDS
ATCCATGTTGCAGCCACTGA+TGG 0.500653 3.4:-78550095 None:intergenic
TTCTCCTAGTCAACCGATGA+TGG 0.501901 3.4:+78550727 MS.gene045397:CDS
ATGAAGGTTTGAAGCAACTA+AGG 0.507056 3.4:-78550246 None:intergenic
ACCGGCGTTGAAGTCCTTGT+TGG 0.507660 3.4:+78550035 MS.gene045397:CDS
TTCAACGCCGGTGTTTGATA+GGG 0.509490 3.4:-78550024 None:intergenic
AACTTCAATCCAGCACCAAT+AGG 0.509537 3.4:-78552191 None:intergenic
AGTTTCGACGCCTCAGTCCA+TGG 0.513215 3.4:+78550280 MS.gene045397:CDS
AGGCTTAGGGATTAAATCCA+TGG 0.514185 3.4:-78550297 None:intergenic
TGGCGCGGACGCTGAAAAGA+TGG 0.514463 3.4:+78550925 MS.gene045397:CDS
TCATAACGGAATAATGTGTT+CGG 0.519391 3.4:-78550515 None:intergenic
GAATAGCTGCACAGTTTGCC+CGG 0.523260 3.4:-78550979 None:intergenic
CCTTATTATGGATATACTAA+AGG 0.527242 3.4:+78550425 MS.gene045397:CDS
CATGGATCATGTGTATATGC+AGG 0.527638 3.4:+78551997 MS.gene045397:CDS
TAGAAGAACTAAAACTCAAA+GGG 0.531024 3.4:-78550856 None:intergenic
TTAGAAGAACTAAAACTCAA+AGG 0.532144 3.4:-78550857 None:intergenic
CATCAAACATACTGTCATAA+CGG 0.533138 3.4:-78550529 None:intergenic
GCTGGTTTGGACTGGGCTTG+CGG 0.533574 3.4:+78550950 MS.gene045397:CDS
ACTTGAGCACGGGTGGTGAT+GGG 0.535349 3.4:+78552135 MS.gene045397:CDS
GACGCTGAAAAGATGGAAGC+TGG 0.535957 3.4:+78550932 MS.gene045397:CDS
AATATCACAACAATAGCAGT+TGG 0.540102 3.4:+78550152 MS.gene045397:CDS
CGTTAACTTACTTGGATCCT+CGG 0.542447 3.4:-78551131 None:intergenic
TAGAAGGAGGAAAAGGCTTA+GGG 0.544622 3.4:-78550310 None:intergenic
GTGGCTGTAGAAGGAGGAAA+AGG 0.545922 3.4:-78550317 None:intergenic
CTTCGTCGGTGACGCCAACA+AGG 0.546156 3.4:-78550049 None:intergenic
TTTAGGTGGACCTAACGAAC+CGG 0.547039 3.4:+78550637 MS.gene045397:CDS
CTCCATCAGTGGCTGCAACA+TGG 0.549987 3.4:+78550093 MS.gene045397:CDS
GCCAACAAGGACTTCAACGC+CGG 0.557159 3.4:-78550036 None:intergenic
GCAACAATATTTGAAGCTGA+TGG 0.558424 3.4:-78549936 None:intergenic
ATCAGTTCTAACTTGAGCAC+GGG 0.563571 3.4:+78552125 MS.gene045397:intron
TTAAAAGTGGCTGTAGAAGG+AGG 0.569222 3.4:-78550323 None:intergenic
CTGTGAAGATGATTCATGGC+AGG 0.571275 3.4:-78550221 None:intergenic
AACAATAGCAGTTGGAAGTG+AGG 0.580046 3.4:+78550160 MS.gene045397:CDS
ATAGCCATCATCGGTTGACT+AGG 0.580777 3.4:-78550731 None:intergenic
ATCAAACAATTCATATAAGT+AGG 0.587450 3.4:-78550759 None:intergenic
TATCAGTTCTAACTTGAGCA+CGG 0.590597 3.4:+78552124 MS.gene045397:intron
GTTCCATGATGAGTTAAAAG+TGG 0.590802 3.4:-78550336 None:intergenic
CATTATAAGCATAAGAGGCA+TGG 0.602398 3.4:-78551042 None:intergenic
ACATCATTGGGGAAATAGCA+AGG 0.603276 3.4:-78551013 None:intergenic
ACTGGTTGGCCACATTTAGG+TGG 0.605390 3.4:+78550623 MS.gene045397:CDS
AAGAGTGAGCAATAACGCAC+TGG 0.605830 3.4:-78549250 None:intergenic
TAGAAGAGAATGCATAGTGA+AGG 0.607869 3.4:-78552226 None:intergenic
TCATTGTCACAGAAACTGGT+TGG 0.608595 3.4:+78550609 MS.gene045397:CDS
TATGGATATACTAAAGGAGA+CGG 0.611436 3.4:+78550431 MS.gene045397:CDS
ACTGTGCAGCTATTCAAGCT+GGG 0.611715 3.4:+78550987 MS.gene045397:CDS
ATTGTTGTGATATTTGTGTG+AGG 0.612136 3.4:-78550143 None:intergenic
CAGTATGTTTGATGCTATGG+TGG 0.617131 3.4:+78550538 MS.gene045397:CDS
AGTTCTAACTTGAGCACGGG+TGG 0.632909 3.4:+78552128 MS.gene045397:intron
TAGGTATTAATAGCCATCAT+CGG 0.632912 3.4:-78550740 None:intergenic
TTGTGTGGCTAAAGATGGCG+CGG 0.639037 3.4:+78550910 MS.gene045397:CDS
ATGATGTAGGTGCATTTGTG+GGG 0.642405 3.4:+78549883 MS.gene045397:intron
GATCATGTGTATATGCAGGA+AGG 0.650405 3.4:+78552001 MS.gene045397:CDS
TCGTTAGGTCCACCTAAATG+TGG 0.659828 3.4:-78550632 None:intergenic
AATTGGAGAATCTCCATCAG+TGG 0.660534 3.4:+78550082 MS.gene045397:CDS
CCTATATCTGAAAGACATTG+GGG 0.668424 3.4:+78550800 MS.gene045397:CDS
CTACAAGCCCTATCAAACAC+CGG 0.677952 3.4:+78550017 MS.gene045397:CDS
GGGATTAAATCCATGGACTG+AGG 0.686707 3.4:-78550290 None:intergenic
TGATGTAGGTGCATTTGTGG+GGG 0.706821 3.4:+78549884 MS.gene045397:intron
TACAGCTATGATAACTACCG+AGG 0.729167 3.4:+78551114 MS.gene045397:CDS
GAGGCGTCGAAACTTTGACG+CGG 0.779048 3.4:-78550271 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTGTTATATAAAACTAATAT+TGG + chr3.4:78552086-78552105 MS.gene045397:intron 10.0%
!! CATTAAATTTCAATGATATA+CGG + chr3.4:78550585-78550604 MS.gene045397:CDS 15.0%
!!! TAAAATTTGTTAGCTTATTT+AGG + chr3.4:78551335-78551354 MS.gene045397:intron 15.0%
!!! TATACTATGTTCTTTTTTTT+TGG + chr3.4:78549387-78549406 MS.gene045397:intron 15.0%
!!! TTGTATTTTGACTAAAAAAA+TGG - chr3.4:78549499-78549518 None:intergenic 15.0%
!! ATAATCATTATAAGCATAAG+AGG - chr3.4:78551050-78551069 None:intergenic 20.0%
!! ATCAAACAATTCATATAAGT+AGG - chr3.4:78550762-78550781 None:intergenic 20.0%
!! CATTTAATCTGAATATTTCA+TGG + chr3.4:78551843-78551862 MS.gene045397:intron 20.0%
!! CCTAATCAAATTATTATTGT+AGG - chr3.4:78550687-78550706 None:intergenic 20.0%
!! CCTACAATAATAATTTGATT+AGG + chr3.4:78550684-78550703 MS.gene045397:CDS 20.0%
!! CTTTAGTATATCCATAATAA+GGG - chr3.4:78550427-78550446 None:intergenic 20.0%
!! GTAACTCTAATTCATTATAA+TGG - chr3.4:78552051-78552070 None:intergenic 20.0%
!! TATCAAAAAATGAATAGTGT+GGG + chr3.4:78551070-78551089 MS.gene045397:CDS 20.0%
!! TCTATACAAATCTTCAATAT+AGG - chr3.4:78551938-78551957 None:intergenic 20.0%
!! TTAGTGATAATCACAAAAAA+AGG - chr3.4:78551889-78551908 None:intergenic 20.0%
!! TTATCAAAAAATGAATAGTG+TGG + chr3.4:78551069-78551088 MS.gene045397:CDS 20.0%
!! TTATTTATCATGTATGATGT+AGG + chr3.4:78549870-78549889 MS.gene045397:intron 20.0%
!! TTTGAGAAAATCACATAATT+CGG + chr3.4:78549620-78549639 MS.gene045397:intron 20.0%
!!! AATTTTAAAGAATAACATCC+TGG + chr3.4:78549754-78549773 MS.gene045397:intron 20.0%
!!! TGATTTTCTCAAATTATTAG+CGG - chr3.4:78549613-78549632 None:intergenic 20.0%
! AATTCTCAATATTTCTTCGT+CGG - chr3.4:78550066-78550085 None:intergenic 25.0%
! ACTTGAAAAAAATGGTGTTT+AGG + chr3.4:78551218-78551237 MS.gene045397:intron 25.0%
! AGAATAATTGAGATTGACAA+AGG - chr3.4:78549315-78549334 None:intergenic 25.0%
! CCTTATTATGGATATACTAA+AGG + chr3.4:78550425-78550444 MS.gene045397:CDS 25.0%
! CCTTTAGTATATCCATAATA+AGG - chr3.4:78550428-78550447 None:intergenic 25.0%
! GAAAAGATTACAAGAATACA+TGG - chr3.4:78549535-78549554 None:intergenic 25.0%
! GGTTATAAGTAATTACTTGT+TGG + chr3.4:78551175-78551194 MS.gene045397:intron 25.0%
! GTGGTTATATGACATTATAA+AGG - chr3.4:78551458-78551477 None:intergenic 25.0%
! TAATGTGATCTAATATCAAC+TGG - chr3.4:78549853-78549872 None:intergenic 25.0%
! TAGAAGAACTAAAACTCAAA+GGG - chr3.4:78550859-78550878 None:intergenic 25.0%
! TCTTTACAAATGAAAAACCA+TGG - chr3.4:78549423-78549442 None:intergenic 25.0%
! TGCAAGTTACTTGAAAAAAA+TGG + chr3.4:78551210-78551229 MS.gene045397:intron 25.0%
! TTAGAAGAACTAAAACTCAA+AGG - chr3.4:78550860-78550879 None:intergenic 25.0%
! TTTGATGAAGATAAGAGAAT+AGG + chr3.4:78550776-78550795 MS.gene045397:CDS 25.0%
!! AATTTTCTTTGTTGAAGGAA+GGG - chr3.4:78550489-78550508 None:intergenic 25.0%
!! AGAATAATTTGAAAAGCATG+TGG - chr3.4:78551477-78551496 None:intergenic 25.0%
!! AGTTCTTCTAACAAGATTTT+CGG + chr3.4:78550869-78550888 MS.gene045397:CDS 25.0%
!! GAATATTTCATGGTTTTTCA+AGG + chr3.4:78551853-78551872 MS.gene045397:intron 25.0%
!! GGTTTTTCATTTGTAAAGAT+CGG + chr3.4:78549424-78549443 MS.gene045397:intron 25.0%
!! GTTTTTCATTTGTAAAGATC+GGG + chr3.4:78549425-78549444 MS.gene045397:intron 25.0%
!! TAATGAGTACTTTGTTATAC+AGG + chr3.4:78551973-78551992 MS.gene045397:intron 25.0%
!! TCAACAATTTTCTTTGTTGA+AGG - chr3.4:78550494-78550513 None:intergenic 25.0%
!! TCATTTTCTCAAATCATAAC+CGG - chr3.4:78551705-78551724 None:intergenic 25.0%
!! TCATTTTCTCAAATCATTAC+CGG - chr3.4:78551631-78551650 None:intergenic 25.0%
!!! TTGAAAATTACGTCACTTTT+GGG - chr3.4:78551553-78551572 None:intergenic 25.0%
!!! TTTTTGGTTTCATTATACCA+TGG + chr3.4:78549403-78549422 MS.gene045397:intron 25.0%
AAGTCCTCTAAATTATGCAA+TGG - chr3.4:78551505-78551524 None:intergenic 30.0%
AATATCACAACAATAGCAGT+TGG + chr3.4:78550152-78550171 MS.gene045397:CDS 30.0%
AATCACAAAAAAAGGTGAAC+TGG - chr3.4:78551881-78551900 None:intergenic 30.0%
ACCTATATCTGAAAGACATT+GGG + chr3.4:78550799-78550818 MS.gene045397:CDS 30.0%
AGTTTGTGTTCTTCAAAAAC+TGG - chr3.4:78550382-78550401 None:intergenic 30.0%
ATCACAAAAAAAGGTGAACT+GGG - chr3.4:78551880-78551899 None:intergenic 30.0%
ATTGTTGTGATATTTGTGTG+AGG - chr3.4:78550146-78550165 None:intergenic 30.0%
CATCAAACATACTGTCATAA+CGG - chr3.4:78550532-78550551 None:intergenic 30.0%
CGAAGTAAAGCATATTCAAT+TGG - chr3.4:78550464-78550483 None:intergenic 30.0%
GACGAAGAAATATTGAGAAT+TGG + chr3.4:78550065-78550084 MS.gene045397:CDS 30.0%
GCTACTGTAAACAATGTATT+AGG + chr3.4:78549273-78549292 MS.gene045397:CDS 30.0%
TACACCATTGCATAATTTAG+AGG + chr3.4:78551498-78551517 MS.gene045397:intron 30.0%
TAGGTATTAATAGCCATCAT+CGG - chr3.4:78550743-78550762 None:intergenic 30.0%
TATGGATATACTAAAGGAGA+CGG + chr3.4:78550431-78550450 MS.gene045397:CDS 30.0%
TTAAATGCTCACCCTTATTA+TGG + chr3.4:78550413-78550432 MS.gene045397:CDS 30.0%
! AGCTTTTCTTCTATTGCATT+TGG + chr3.4:78552158-78552177 MS.gene045397:CDS 30.0%
! CAATTTTCTTTGTTGAAGGA+AGG - chr3.4:78550490-78550509 None:intergenic 30.0%
! CATTTTTCTAACGAAGTAGT+TGG + chr3.4:78549778-78549797 MS.gene045397:intron 30.0%
! TCATAACGGAATAATGTGTT+CGG - chr3.4:78550518-78550537 None:intergenic 30.0%
! TTCGGTGTAATTATATGTGT+CGG + chr3.4:78549638-78549657 MS.gene045397:intron 30.0%
!! GTTGAAAATTACGTCACTTT+TGG - chr3.4:78551554-78551573 None:intergenic 30.0%
!!! GGACTTTTTTACACTACTAA+TGG + chr3.4:78550821-78550840 MS.gene045397:CDS 30.0%
ACATAGTATAACGCTGAACA+TGG - chr3.4:78549377-78549396 None:intergenic 35.0%
ACTTCGTTAGAAAAATGTCC+AGG - chr3.4:78549775-78549794 None:intergenic 35.0%
AGTGCTTCATAGCTCATTAA+CGG - chr3.4:78551576-78551595 None:intergenic 35.0%
CAAAAAATGAATAGTGTGGG+AGG + chr3.4:78551073-78551092 MS.gene045397:CDS 35.0%
CATTATAAGCATAAGAGGCA+TGG - chr3.4:78551045-78551064 None:intergenic 35.0%
CCTATATCTGAAAGACATTG+GGG + chr3.4:78550800-78550819 MS.gene045397:CDS 35.0%
CTGAATGTAACCTTATGTGT+CGG + chr3.4:78551730-78551749 MS.gene045397:intron 35.0%
CTGTTAGAATTAGTTGCAGT+TGG + chr3.4:78551154-78551173 MS.gene045397:intron 35.0%
GACCTATATCTGAAAGACAT+TGG + chr3.4:78550798-78550817 MS.gene045397:CDS 35.0%
GTTCCATGATGAGTTAAAAG+TGG - chr3.4:78550339-78550358 None:intergenic 35.0%
TAGAAGAGAATGCATAGTGA+AGG - chr3.4:78552229-78552248 None:intergenic 35.0%
TATGATGTAGGTGCATTTGT+GGG + chr3.4:78549882-78549901 MS.gene045397:intron 35.0%
TCTAACAGCGTTAACTTACT+TGG - chr3.4:78551142-78551161 None:intergenic 35.0%
TGACAGTATGTTTGATGCTA+TGG + chr3.4:78550535-78550554 MS.gene045397:CDS 35.0%
TTGTGTTCTTCAAAAACTGG+AGG - chr3.4:78550379-78550398 None:intergenic 35.0%
! ATGAAGGTTTGAAGCAACTA+AGG - chr3.4:78550249-78550268 None:intergenic 35.0%
! CTCAACAAGTAGCTTCTTTT+AGG + chr3.4:78551264-78551283 MS.gene045397:intron 35.0%
! GCAACAATATTTGAAGCTGA+TGG - chr3.4:78549939-78549958 None:intergenic 35.0%
! GTAATTATATGTGTCGGTGT+CGG + chr3.4:78549644-78549663 MS.gene045397:intron 35.0%
! GTACTTTGTTATACAGGTCA+TGG + chr3.4:78551979-78551998 MS.gene045397:intron 35.0%
! TATCAGTTCTAACTTGAGCA+CGG + chr3.4:78552124-78552143 MS.gene045397:intron 35.0%
! TCTTTTTGTGTGGCTAAAGA+TGG + chr3.4:78550905-78550924 MS.gene045397:CDS 35.0%
! TTCTTCGAAGTCTTTTTGTG+TGG + chr3.4:78550895-78550914 MS.gene045397:CDS 35.0%
!! AATTGAGTTAGAGTGTTGCA+AGG + chr3.4:78549818-78549837 MS.gene045397:intron 35.0%
!! AGGAGAGTACTTAATGATTC+AGG + chr3.4:78550704-78550723 MS.gene045397:CDS 35.0%
!! CTCTTCTACTAGTCTACTTT+TGG + chr3.4:78552241-78552260 MS.gene045397:CDS 35.0%
AAACTTTGACGCGGAAATGA+AGG - chr3.4:78550265-78550284 None:intergenic 40.0%
AACAATAGCAGTTGGAAGTG+AGG + chr3.4:78550160-78550179 MS.gene045397:CDS 40.0%
AACTTCAATCCAGCACCAAT+AGG - chr3.4:78552194-78552213 None:intergenic 40.0%
AATTGACACGTGTCAGACAT+TGG + chr3.4:78551773-78551792 MS.gene045397:intron 40.0%
AATTGGAGAATCTCCATCAG+TGG + chr3.4:78550082-78550101 MS.gene045397:CDS 40.0%
ACAAGAACACGAGCAACATT+TGG - chr3.4:78550200-78550219 None:intergenic 40.0%
ACATCATTGGGGAAATAGCA+AGG - chr3.4:78551016-78551035 None:intergenic 40.0%
AGGCTTAGGGATTAAATCCA+TGG - chr3.4:78550300-78550319 None:intergenic 40.0%
ATGATGTAGGTGCATTTGTG+GGG + chr3.4:78549883-78549902 MS.gene045397:intron 40.0%
ATTGACACGTGTCAGACATT+GGG + chr3.4:78551774-78551793 MS.gene045397:intron 40.0%
CAACATTGACACGTTAACAC+CGG + chr3.4:78551683-78551702 MS.gene045397:intron 40.0%
CAAGAACACGAGCAACATTT+GGG - chr3.4:78550199-78550218 None:intergenic 40.0%
CAGTATGTTTGATGCTATGG+TGG + chr3.4:78550538-78550557 MS.gene045397:CDS 40.0%
CATGGATCATGTGTATATGC+AGG + chr3.4:78551997-78552016 MS.gene045397:CDS 40.0%
CCCCAATGTCTTTCAGATAT+AGG - chr3.4:78550803-78550822 None:intergenic 40.0%
CGTTAACTTACTTGGATCCT+CGG - chr3.4:78551134-78551153 None:intergenic 40.0%
GAGTTAAAAGTGGCTGTAGA+AGG - chr3.4:78550329-78550348 None:intergenic 40.0%
GATCATGTGTATATGCAGGA+AGG + chr3.4:78552001-78552020 MS.gene045397:CDS 40.0%
GTATGATGTAGGTGCATTTG+TGG + chr3.4:78549881-78549900 MS.gene045397:intron 40.0%
TAATCGATGAAGCACGGATA+CGG + chr3.4:78549570-78549589 MS.gene045397:intron 40.0%
TACAGCTATGATAACTACCG+AGG + chr3.4:78551114-78551133 MS.gene045397:CDS 40.0%
TAGAAGGAGGAAAAGGCTTA+GGG - chr3.4:78550313-78550332 None:intergenic 40.0%
TCATTGTCACAGAAACTGGT+TGG + chr3.4:78550609-78550628 MS.gene045397:CDS 40.0%
TCTTCAAAAACTGGAGGACT+TGG - chr3.4:78550373-78550392 None:intergenic 40.0%
TGAAAAGATGGAAGCTGGTT+TGG + chr3.4:78550937-78550956 MS.gene045397:CDS 40.0%
TGAGCATAATCGATGAAGCA+CGG + chr3.4:78549564-78549583 MS.gene045397:intron 40.0%
TTAAAAGTGGCTGTAGAAGG+AGG - chr3.4:78550326-78550345 None:intergenic 40.0%
TTGAGATTGACAAAGGAGTG+TGG - chr3.4:78549308-78549327 None:intergenic 40.0%
TTTGGACCTGTAAGTCCTAT+TGG + chr3.4:78552176-78552195 MS.gene045397:CDS 40.0%
! AGAAGCTACTTGTTGAGTGT+AGG - chr3.4:78551261-78551280 None:intergenic 40.0%
! ATCAGTTCTAACTTGAGCAC+GGG + chr3.4:78552125-78552144 MS.gene045397:intron 40.0%
! CATGGCTTTTCACATCATTG+GGG - chr3.4:78551027-78551046 None:intergenic 40.0%
! GCATGGCTTTTCACATCATT+GGG - chr3.4:78551028-78551047 None:intergenic 40.0%
! GCATTTTCTAAACTAGCGTC+CGG - chr3.4:78550659-78550678 None:intergenic 40.0%
!!! CAGCCACTTTTAACTCATCA+TGG + chr3.4:78550333-78550352 MS.gene045397:CDS 40.0%
AACTGTGCAGCTATTCAAGC+TGG + chr3.4:78550986-78551005 MS.gene045397:CDS 45.0%
AAGAGTGAGCAATAACGCAC+TGG - chr3.4:78549253-78549272 None:intergenic 45.0%
ACTGTGCAGCTATTCAAGCT+GGG + chr3.4:78550987-78551006 MS.gene045397:CDS 45.0%
CGGATCATTGTCACAGAAAC+TGG + chr3.4:78550605-78550624 MS.gene045397:CDS 45.0%
CTACAAGCCCTATCAAACAC+CGG + chr3.4:78550017-78550036 MS.gene045397:CDS 45.0%
CTGGAACACAACATTGACAC+CGG + chr3.4:78551609-78551628 MS.gene045397:intron 45.0%
CTGTGAAGATGATTCATGGC+AGG - chr3.4:78550224-78550243 None:intergenic 45.0%
GCATATGCTCCTATGAAGCA+CGG - chr3.4:78549707-78549726 None:intergenic 45.0%
GCATTTGTGGGGGTAAACAT+TGG + chr3.4:78549894-78549913 MS.gene045397:CDS 45.0%
GGCACTGTGAAGATGATTCA+TGG - chr3.4:78550228-78550247 None:intergenic 45.0%
GTAGAAGGAGGAAAAGGCTT+AGG - chr3.4:78550314-78550333 None:intergenic 45.0%
TCGTTAGGTCCACCTAAATG+TGG - chr3.4:78550635-78550654 None:intergenic 45.0%
TGATGTAGGTGCATTTGTGG+GGG + chr3.4:78549884-78549903 MS.gene045397:intron 45.0%
TTCAACGCCGGTGTTTGATA+GGG - chr3.4:78550027-78550046 None:intergenic 45.0%
TTCTCCTAGTCAACCGATGA+TGG + chr3.4:78550727-78550746 MS.gene045397:CDS 45.0%
TTTAGGTGGACCTAACGAAC+CGG + chr3.4:78550637-78550656 MS.gene045397:CDS 45.0%
! ACACCTTCGATCAGAAGTGT+CGG + chr3.4:78551798-78551817 MS.gene045397:intron 45.0%
! ATAGCCATCATCGGTTGACT+AGG - chr3.4:78550734-78550753 None:intergenic 45.0%
! GAAACTGGTTGGCCACATTT+AGG + chr3.4:78550620-78550639 MS.gene045397:CDS 45.0%
! GGCATGGCTTTTCACATCAT+TGG - chr3.4:78551029-78551048 None:intergenic 45.0%
! GGGATTAAATCCATGGACTG+AGG - chr3.4:78550293-78550312 None:intergenic 45.0%
!! AAGAAGTGTCCGTGCTTCAT+AGG + chr3.4:78549695-78549714 MS.gene045397:intron 45.0%
!! CACTTTTGGGTGCGAATTTC+TGG - chr3.4:78551540-78551559 None:intergenic 45.0%
!! CTTATGTGTCGGTGTTGTGT+CGG + chr3.4:78551741-78551760 MS.gene045397:intron 45.0%
ATCCATGTTGCAGCCACTGA+TGG - chr3.4:78550098-78550117 None:intergenic 50.0%
ATGAAGCACGGATACGGACA+CGG + chr3.4:78549576-78549595 MS.gene045397:intron 50.0%
CACAACACATGTCCTACACC+AGG + chr3.4:78549668-78549687 MS.gene045397:intron 50.0%
CACTTCTTGTGTCCTGGTGT+AGG - chr3.4:78549683-78549702 None:intergenic 50.0%
CCAGCACCAATAGGACTTAC+AGG - chr3.4:78552185-78552204 None:intergenic 50.0%
CCTGTAAGTCCTATTGGTGC+TGG + chr3.4:78552182-78552201 MS.gene045397:CDS 50.0%
CGACACAACACCGACACATA+AGG - chr3.4:78551743-78551762 None:intergenic 50.0%
CTTCAACGCCGGTGTTTGAT+AGG - chr3.4:78550028-78550047 None:intergenic 50.0%
GAATAGCTGCACAGTTTGCC+CGG - chr3.4:78550982-78551001 None:intergenic 50.0%
GACGCTGAAAAGATGGAAGC+TGG + chr3.4:78550932-78550951 MS.gene045397:CDS 50.0%
GTGGCTGTAGAAGGAGGAAA+AGG - chr3.4:78550320-78550339 None:intergenic 50.0%
TTGTGTGGCTAAAGATGGCG+CGG + chr3.4:78550910-78550929 MS.gene045397:CDS 50.0%
! AAACTAGCGTCCGGTTCGTT+AGG - chr3.4:78550650-78550669 None:intergenic 50.0%
! ACTGGTTGGCCACATTTAGG+TGG + chr3.4:78550623-78550642 MS.gene045397:CDS 50.0%
! AGTTCTAACTTGAGCACGGG+TGG + chr3.4:78552128-78552147 MS.gene045397:intron 50.0%
!! AGATGGAAGCTGGTTTGGAC+TGG + chr3.4:78550942-78550961 MS.gene045397:CDS 50.0%
!! AGCACTGACACAACACAGAC+TGG + chr3.4:78551590-78551609 MS.gene045397:intron 50.0%
!! GATGGAAGCTGGTTTGGACT+GGG + chr3.4:78550943-78550962 MS.gene045397:CDS 50.0%
AACTTGAGCACGGGTGGTGA+TGG + chr3.4:78552134-78552153 MS.gene045397:CDS 55.0%
ACTTGAGCACGGGTGGTGAT+GGG + chr3.4:78552135-78552154 MS.gene045397:CDS 55.0%
AGTTTCGACGCCTCAGTCCA+TGG + chr3.4:78550280-78550299 MS.gene045397:CDS 55.0%
CACGGACACTTCTTGTGTCC+TGG - chr3.4:78549689-78549708 None:intergenic 55.0%
CTCCATCAGTGGCTGCAACA+TGG + chr3.4:78550093-78550112 MS.gene045397:CDS 55.0%
GCCAACAAGGACTTCAACGC+CGG - chr3.4:78550039-78550058 None:intergenic 55.0%
! ACCGGCGTTGAAGTCCTTGT+TGG + chr3.4:78550035-78550054 MS.gene045397:CDS 55.0%
! GCACCGACACTTCTGATCGA+AGG - chr3.4:78551804-78551823 None:intergenic 55.0%
!! GAGGCGTCGAAACTTTGACG+CGG - chr3.4:78550274-78550293 None:intergenic 55.0%
CTTCGTCGGTGACGCCAACA+AGG - chr3.4:78550052-78550071 None:intergenic 60.0%
TGGCGCGGACGCTGAAAAGA+TGG + chr3.4:78550925-78550944 MS.gene045397:CDS 60.0%
! TTGGACTGGGCTTGCGGAGA+AGG + chr3.4:78550956-78550975 MS.gene045397:CDS 60.0%
!! GCTGGTTTGGACTGGGCTTG+CGG + chr3.4:78550950-78550969 MS.gene045397:CDS 60.0%
ACTGGGCTTGCGGAGAAGGC+CGG + chr3.4:78550960-78550979 MS.gene045397:CDS 65.0%
CTGGGCTTGCGGAGAAGGCC+GGG + chr3.4:78550961-78550980 MS.gene045397:CDS 70.0%


Chromosome Type Strat End Strand Name
chr3.4 gene 78549228 78552277 78549228 ID=MS.gene045397
chr3.4 mRNA 78549228 78552277 78549228 ID=MS.gene045397.t1;Parent=MS.gene045397
chr3.4 exon 78549228 78549294 78549228 ID=MS.gene045397.t1.exon1;Parent=MS.gene045397.t1
chr3.4 CDS 78549228 78549294 78549228 ID=cds.MS.gene045397.t1;Parent=MS.gene045397.t1
chr3.4 exon 78549892 78551142 78549892 ID=MS.gene045397.t1.exon2;Parent=MS.gene045397.t1
chr3.4 CDS 78549892 78551142 78549892 ID=cds.MS.gene045397.t1;Parent=MS.gene045397.t1
chr3.4 exon 78551995 78552022 78551995 ID=MS.gene045397.t1.exon3;Parent=MS.gene045397.t1
chr3.4 CDS 78551995 78552022 78551995 ID=cds.MS.gene045397.t1;Parent=MS.gene045397.t1
chr3.4 exon 78552130 78552277 78552130 ID=MS.gene045397.t1.exon4;Parent=MS.gene045397.t1
chr3.4 CDS 78552130 78552277 78552130 ID=cds.MS.gene045397.t1;Parent=MS.gene045397.t1
Gene Sequence

>MS.gene045397

ATGAAGCTTCAAAAATGGCTCACCAGTGCGTTATTGCTCACTCTTGCTACTGTAAACAATGTATTAGGTAATTTATGCCACACTCCTTTGTCAATCTCAATTATTCTGTTCATTTTTGCTTTGAGTTGAAAAAACTATTATTATTACCATGTTCAGCGTTATACTATGTTCTTTTTTTTTGGTTTCATTATACCATGGTTTTTCATTTGTAAAGATCGGGTTATGTGTTATCAGTTAACTTTTATTCGCAGTTACAGATATTTCTAAACCATTTTTTTAGTCAAAATACAATGTTTGATAGTAGCCATGTATTCTTGTAATCTTTTCTTCATACTATGAGCATAATCGATGAAGCACGGATACGGACACGGACACTCTGACACCGCTAATAATTTGAGAAAATCACATAATTCGGTGTAATTATATGTGTCGGTGTCGGACACAACACATGTCCTACACCAGGACACAAGAAGTGTCCGTGCTTCATAGGAGCATATGCTACTTTATTATTTAACTTCATAGTTAGAATTTTAAAGAATAACATCCTGGACATTTTTCTAACGAAGTAGTTGGTTTTGAAACTTAATAATAATTGAGTTAGAGTGTTGCAAGGAATATTTTTCCAGTTGATATTAGATCACATTATTTATCATGTATGATGTAGGTGCATTTGTGGGGGTAAACATTGGCACTCATGTTACTGATCTACCATCAGCTTCAAATATTGTTGCTATTCTAAAATCTCATCAAATTACTCATGTGCGTCTCTATGATGCTAATGCTCACATGCTACAAGCCCTATCAAACACCGGCGTTGAAGTCCTTGTTGGCGTCACCGACGAAGAAATATTGAGAATTGGAGAATCTCCATCAGTGGCTGCAACATGGATTAGCAAAAACGTAGCTGCTTACATGCCTCACACAAATATCACAACAATAGCAGTTGGAAGTGAGGTTCTAACTTCAATCCCAAATGTTGCTCGTGTTCTTGTTCCTGCCATGAATCATCTTCACAGTGCCTTAGTTGCTTCAAACCTTCATTTCCGCGTCAAAGTTTCGACGCCTCAGTCCATGGATTTAATCCCTAAGCCTTTTCCTCCTTCTACAGCCACTTTTAACTCATCATGGAACTCAACAATTCACCAAGTCCTCCAGTTTTTGAAGAACACAAACTCTTCTTATATGTTAAATGCTCACCCTTATTATGGATATACTAAAGGAGACGGCATTTTTCCAATTGAATATGCTTTACTTCGATCCCTTCCTTCAACAAAGAAAATTGTTGATCCGAACACATTATTCCGTTATGACAGTATGTTTGATGCTATGGTGGATGCTACTTATTATTCAATACAAGCATTAAATTTCAATGATATACGGATCATTGTCACAGAAACTGGTTGGCCACATTTAGGTGGACCTAACGAACCGGACGCTAGTTTAGAAAATGCTGAGACCTACAATAATAATTTGATTAGGAGAGTACTTAATGATTCAGGTTCTCCTAGTCAACCGATGATGGCTATTAATACCTACTTATATGAATTGTTTGATGAAGATAAGAGAATAGGACCTATATCTGAAAGACATTGGGGACTTTTTTACACTACTAATGGAAGTAGTGTTTACCCTTTGAGTTTTAGTTCTTCTAACAAGATTTTCGGAAATTCTTCGAAGTCTTTTTGTGTGGCTAAAGATGGCGCGGACGCTGAAAAGATGGAAGCTGGTTTGGACTGGGCTTGCGGAGAAGGCCGGGCAAACTGTGCAGCTATTCAAGCTGGGAGACCTTGCTATTTCCCCAATGATGTGAAAAGCCATGCCTCTTATGCTTATAATGATTATTATCAAAAAATGAATAGTGTGGGAGGAACATGTGACTTTGATGATACAGCTATGATAACTACCGAGGATCCAAGTAAGTTAACGCTGTTAGAATTAGTTGCAGTTGGTTATAAGTAATTACTTGTTGGTTTAGTATTAATTGCAAGTTACTTGAAAAAAATGGTGTTTAGGATTGCTGTATAGTGTATCCTACACTCAACAAGTAGCTTCTTTTAGGATTGTTATAAAGTAATTTTGATGATACAGCTATGTACTTTTATTTTAGTAAAATTTGTTAGCTTATTTAGGATTGTTATATAGTGTATTACACTCAACAAGTAGCTTCTTATAATCTGTTTTAATTCAAATCTTTCTGTATGTCACTTTTGTAACATATCAACTCATTCCTTTATAATGTCATATAACCACATGCTTTTCAAATTATTCTATACACCATTGCATAATTTAGAGGACTTGCTCTTGCGAAGCCAGAAATTCGCACCCAAAAGTGACGTAATTTTCAACCGTTAATGAGCTATGAAGCACTGACACAACACAGACTGGAACACAACATTGACACCGGTAATGATTTGAGAAAATGACATTAATGAGCTATGAAGCACAAACACGAACACAACATTGACACGTTAACACCGGTTATGATTTGAGAAAATGACAAAACTGAATGTAACCTTATGTGTCGGTGTTGTGTCGGTCTGTCAAAAATTGACACGTGTCAGACATTGGGCACACCTTCGATCAGAAGTGTCGGTGCTACAAAGTTAGTGAGCAAACATTTAATCTGAATATTTCATGGTTTTTCAAGGTCCCAGTTCACCTTTTTTTGTGATTATCACTAAAATGTTTGTTTGTGAATAATGACATGCCTATATTGAAGATTTGTATAGAGAATAAAGCAACTAATAATGAGTACTTTGTTATACAGGTCATGGATCATGTGTATATGCAGGAAGGTAAGAATGTGACTCTTTTGTACATCCATTATAATGAATTAGAGTTACAAGTAAACTTTTACATTGTTATATAAAACTAATATTGGTATTGAATATTTTCATATCAGTTCTAACTTGAGCACGGGTGGTGATGGGAGCTTTTCTTCTATTGCATTTGGACCTGTAAGTCCTATTGGTGCTGGATTGAAGTTGCAACTGTCTAACCTTCACTATGCATTCTCTTCTACTAGTCTACTTTTGGCTCTGATGTTGTAA
Protein sequence

>MS.gene045397.t1

MKLQKWLTSALLLTLATVNNVLGAFVGVNIGTHVTDLPSASNIVAILKSHQITHVRLYDANAHMLQALSNTGVEVLVGVTDEEILRIGESPSVAATWISKNVAAYMPHTNITTIAVGSEVLTSIPNVARVLVPAMNHLHSALVASNLHFRVKVSTPQSMDLIPKPFPPSTATFNSSWNSTIHQVLQFLKNTNSSYMLNAHPYYGYTKGDGIFPIEYALLRSLPSTKKIVDPNTLFRYDSMFDAMVDATYYSIQALNFNDIRIIVTETGWPHLGGPNEPDASLENAETYNNNLIRRVLNDSGSPSQPMMAINTYLYELFDEDKRIGPISERHWGLFYTTNGSSVYPLSFSSSNKIFGNSSKSFCVAKDGADAEKMEAGLDWACGEGRANCAAIQAGRPCYFPNDVKSHASYAYNDYYQKMNSVGGTCDFDDTAMITTEDPSHGSCVYAGSSNLSTGGDGSFSSIAFGPVSPIGAGLKLQLSNLHYAFSSTSLLLALML