Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene79856.t1 | XP_003601614.1 | 96.4 | 498 | 17 | 1 | 1 | 497 | 1 | 498 | 1.00E-275 | 958.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene79856.t1 | Q94CD8 | 61.0 | 497 | 191 | 3 | 1 | 496 | 1 | 495 | 1.6e-173 | 610.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene79856.t1 | G7JA37 | 96.4 | 498 | 17 | 1 | 1 | 497 | 1 | 498 | 7.3e-276 | 958.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049171 | MS.gene79856 | -0.81931 | 1.24E-52 | -1.69E-46 |
| MS.gene050170 | MS.gene79856 | -0.804184 | 2.44E-49 | -1.69E-46 |
| MS.gene050338 | MS.gene79856 | 0.854913 | 8.97E-62 | -1.69E-46 |
| MS.gene050577 | MS.gene79856 | -0.8201 | 8.20E-53 | -1.69E-46 |
| MS.gene050612 | MS.gene79856 | -0.807986 | 3.87E-50 | -1.69E-46 |
| MS.gene051517 | MS.gene79856 | 0.802695 | 4.97E-49 | -1.69E-46 |
| MS.gene051651 | MS.gene79856 | 0.815778 | 7.76E-52 | -1.69E-46 |
| MS.gene052129 | MS.gene79856 | 0.819261 | 1.27E-52 | -1.69E-46 |
| MS.gene052143 | MS.gene79856 | 0.803419 | 3.52E-49 | -1.69E-46 |
| MS.gene053218 | MS.gene79856 | 0.820515 | 6.58E-53 | -1.69E-46 |
| MS.gene05470 | MS.gene79856 | -0.849002 | 4.27E-60 | -1.69E-46 |
| MS.gene055134 | MS.gene79856 | 0.80287 | 4.57E-49 | -1.69E-46 |
| MS.gene055251 | MS.gene79856 | 0.859356 | 4.38E-63 | -1.69E-46 |
| MS.gene055729 | MS.gene79856 | 0.822421 | 2.39E-53 | -1.69E-46 |
| MS.gene055730 | MS.gene79856 | 0.820974 | 5.17E-53 | -1.69E-46 |
| MS.gene055731 | MS.gene79856 | 0.830532 | 2.79E-55 | -1.69E-46 |
| MS.gene055748 | MS.gene79856 | -0.856902 | 2.35E-62 | -1.69E-46 |
| MS.gene055750 | MS.gene79856 | -0.812812 | 3.51E-51 | -1.69E-46 |
| MS.gene055751 | MS.gene79856 | -0.860996 | 1.40E-63 | -1.69E-46 |
| MS.gene05589 | MS.gene79856 | -0.852402 | 4.73E-61 | -1.69E-46 |
| MS.gene056266 | MS.gene79856 | -0.857864 | 1.22E-62 | -1.69E-46 |
| MS.gene056504 | MS.gene79856 | -0.809359 | 1.97E-50 | -1.69E-46 |
| MS.gene056694 | MS.gene79856 | 0.805911 | 1.06E-49 | -1.69E-46 |
| MS.gene058334 | MS.gene79856 | 0.829683 | 4.49E-55 | -1.69E-46 |
| MS.gene058838 | MS.gene79856 | -0.815523 | 8.85E-52 | -1.69E-46 |
| MS.gene059667 | MS.gene79856 | -0.804725 | 1.88E-49 | -1.69E-46 |
| MS.gene060076 | MS.gene79856 | 0.808053 | 3.74E-50 | -1.69E-46 |
| MS.gene060762 | MS.gene79856 | -0.813973 | 1.95E-51 | -1.69E-46 |
| MS.gene06084 | MS.gene79856 | 0.801463 | 8.90E-49 | -1.69E-46 |
| MS.gene060982 | MS.gene79856 | -0.826218 | 3.06E-54 | -1.69E-46 |
| MS.gene061044 | MS.gene79856 | 0.860139 | 2.54E-63 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene79856 | MS.gene017394 | PPI |
| MS.gene79856 | MS.gene04978 | PPI |
| MS.gene79856 | MS.gene064517 | PPI |
| MS.gene79856 | MS.gene048701 | PPI |
| MS.gene79856 | MS.gene008280 | PPI |
| MS.gene79856 | MS.gene048741 | PPI |
| MS.gene79856 | MS.gene78534 | PPI |
| MS.gene79856 | MS.gene26114 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene79856.t1 | MTR_3g083580 | 96.386 | 498 | 17 | 1 | 1 | 497 | 1 | 498 | 0.0 | 1001 |
| MS.gene79856.t1 | MTR_8g085720 | 71.457 | 501 | 135 | 5 | 1 | 497 | 1 | 497 | 0.0 | 744 |
| MS.gene79856.t1 | MTR_3g065460 | 49.663 | 445 | 221 | 2 | 11 | 453 | 9 | 452 | 7.46e-167 | 481 |
| MS.gene79856.t1 | MTR_1g031900 | 51.636 | 428 | 204 | 2 | 24 | 449 | 22 | 448 | 6.15e-166 | 478 |
| MS.gene79856.t1 | MTR_5g078200 | 51.756 | 427 | 203 | 2 | 25 | 449 | 22 | 447 | 2.18e-165 | 482 |
| MS.gene79856.t1 | MTR_1g031900 | 50.000 | 444 | 219 | 2 | 24 | 465 | 22 | 464 | 6.87e-165 | 476 |
| MS.gene79856.t1 | MTR_5g078200 | 51.325 | 415 | 199 | 2 | 37 | 449 | 1 | 414 | 2.15e-158 | 463 |
| MS.gene79856.t1 | MTR_4g132280 | 50.115 | 433 | 213 | 2 | 23 | 453 | 42 | 473 | 2.80e-158 | 460 |
| MS.gene79856.t1 | MTR_6g088885 | 36.009 | 461 | 276 | 6 | 6 | 454 | 9 | 462 | 3.92e-113 | 344 |
| MS.gene79856.t1 | MTR_1g056640 | 36.324 | 457 | 251 | 5 | 26 | 446 | 38 | 490 | 5.01e-108 | 330 |
| MS.gene79856.t1 | MTR_5g085580 | 36.099 | 446 | 256 | 5 | 26 | 446 | 25 | 466 | 1.62e-104 | 320 |
| MS.gene79856.t1 | MTR_8g102340 | 35.520 | 442 | 239 | 6 | 23 | 456 | 25 | 428 | 4.36e-97 | 301 |
| MS.gene79856.t1 | MTR_4g069940 | 35.147 | 441 | 268 | 5 | 24 | 450 | 27 | 463 | 5.40e-92 | 288 |
| MS.gene79856.t1 | MTR_3g116510 | 35.845 | 438 | 265 | 6 | 24 | 450 | 26 | 458 | 1.06e-90 | 285 |
| MS.gene79856.t1 | MTR_8g012400 | 34.180 | 433 | 268 | 7 | 27 | 446 | 30 | 458 | 1.64e-89 | 281 |
| MS.gene79856.t1 | MTR_1g022160 | 34.498 | 458 | 262 | 7 | 25 | 448 | 23 | 476 | 2.03e-89 | 282 |
| MS.gene79856.t1 | MTR_7g053500 | 33.790 | 438 | 266 | 8 | 27 | 446 | 27 | 458 | 3.18e-88 | 278 |
| MS.gene79856.t1 | MTR_4g088155 | 34.615 | 442 | 261 | 8 | 26 | 446 | 23 | 457 | 4.84e-88 | 278 |
| MS.gene79856.t1 | MTR_1g022160 | 33.987 | 459 | 265 | 7 | 25 | 449 | 23 | 477 | 1.17e-86 | 275 |
| MS.gene79856.t1 | MTR_1g022160 | 34.076 | 449 | 258 | 7 | 25 | 439 | 23 | 467 | 3.24e-84 | 268 |
| MS.gene79856.t1 | MTR_4g083500 | 34.667 | 450 | 257 | 10 | 26 | 446 | 44 | 485 | 6.84e-81 | 261 |
| MS.gene79856.t1 | MTR_3g080410 | 37.805 | 328 | 199 | 3 | 23 | 349 | 23 | 346 | 6.96e-80 | 253 |
| MS.gene79856.t1 | MTR_7g026340 | 34.554 | 437 | 255 | 13 | 26 | 444 | 23 | 446 | 1.04e-78 | 253 |
| MS.gene79856.t1 | MTR_7g053500 | 34.456 | 386 | 229 | 8 | 79 | 446 | 2 | 381 | 6.25e-77 | 246 |
| MS.gene79856.t1 | MTR_4g084480 | 38.658 | 313 | 187 | 3 | 24 | 335 | 30 | 338 | 1.44e-75 | 243 |
| MS.gene79856.t1 | MTR_4g084480 | 36.827 | 353 | 216 | 5 | 24 | 375 | 23 | 369 | 2.04e-75 | 243 |
| MS.gene79856.t1 | MTR_4g084480 | 38.658 | 313 | 187 | 3 | 24 | 335 | 30 | 338 | 3.37e-75 | 242 |
| MS.gene79856.t1 | MTR_8g012400 | 33.773 | 379 | 234 | 7 | 81 | 446 | 4 | 378 | 3.35e-74 | 239 |
| MS.gene79856.t1 | MTR_1g077990 | 37.231 | 325 | 197 | 5 | 26 | 349 | 31 | 349 | 5.38e-72 | 234 |
| MS.gene79856.t1 | MTR_4g010200 | 36.812 | 345 | 208 | 5 | 11 | 349 | 13 | 353 | 3.51e-71 | 231 |
| MS.gene79856.t1 | MTR_2g086530 | 36.667 | 330 | 201 | 5 | 23 | 351 | 5 | 327 | 3.14e-69 | 226 |
| MS.gene79856.t1 | MTR_2g086530 | 37.231 | 325 | 196 | 5 | 23 | 346 | 26 | 343 | 4.28e-69 | 226 |
| MS.gene79856.t1 | MTR_2g019345 | 35.952 | 331 | 206 | 4 | 6 | 335 | 4 | 329 | 1.06e-68 | 225 |
| MS.gene79856.t1 | MTR_4g052970 | 35.385 | 325 | 200 | 5 | 23 | 344 | 26 | 343 | 5.22e-68 | 223 |
| MS.gene79856.t1 | MTR_1g007810 | 38.019 | 313 | 183 | 6 | 26 | 335 | 16 | 320 | 8.33e-67 | 219 |
| MS.gene79856.t1 | MTR_1g022160 | 36.137 | 321 | 201 | 4 | 25 | 344 | 23 | 340 | 5.72e-66 | 219 |
| MS.gene79856.t1 | MTR_4g114850 | 34.862 | 327 | 208 | 3 | 27 | 352 | 27 | 349 | 6.41e-66 | 217 |
| MS.gene79856.t1 | MTR_4g114850 | 34.862 | 327 | 208 | 3 | 27 | 352 | 27 | 349 | 6.89e-66 | 217 |
| MS.gene79856.t1 | MTR_4g114850 | 34.862 | 327 | 208 | 3 | 27 | 352 | 27 | 349 | 1.24e-65 | 217 |
| MS.gene79856.t1 | MTR_3g116510 | 35.866 | 329 | 196 | 5 | 132 | 450 | 1 | 324 | 6.63e-64 | 211 |
| MS.gene79856.t1 | MTR_1g053320 | 30.837 | 454 | 284 | 14 | 9 | 444 | 13 | 454 | 8.13e-62 | 210 |
| MS.gene79856.t1 | MTR_3g108600 | 31.881 | 436 | 251 | 16 | 26 | 446 | 31 | 435 | 3.19e-60 | 205 |
| MS.gene79856.t1 | MTR_1g010120 | 29.935 | 461 | 295 | 16 | 1 | 446 | 1 | 448 | 2.74e-59 | 203 |
| MS.gene79856.t1 | MTR_4g076500 | 31.481 | 324 | 211 | 2 | 26 | 349 | 78 | 390 | 1.54e-55 | 191 |
| MS.gene79856.t1 | MTR_4g076490 | 32.903 | 310 | 193 | 5 | 26 | 335 | 97 | 391 | 4.96e-55 | 190 |
| MS.gene79856.t1 | MTR_2g034440 | 32.831 | 332 | 200 | 7 | 24 | 348 | 20 | 335 | 5.59e-55 | 187 |
| MS.gene79856.t1 | MTR_4g112025 | 29.412 | 442 | 281 | 15 | 23 | 446 | 28 | 456 | 1.21e-54 | 191 |
| MS.gene79856.t1 | MTR_7g081350 | 31.579 | 342 | 217 | 9 | 9 | 346 | 7 | 335 | 2.50e-54 | 186 |
| MS.gene79856.t1 | MTR_2g027560 | 30.046 | 436 | 273 | 16 | 26 | 444 | 28 | 448 | 3.06e-54 | 189 |
| MS.gene79856.t1 | MTR_4g076430 | 33.538 | 325 | 197 | 9 | 26 | 349 | 23 | 329 | 4.32e-54 | 185 |
| MS.gene79856.t1 | MTR_4g076570 | 32.903 | 310 | 199 | 4 | 26 | 335 | 22 | 322 | 4.36e-54 | 186 |
| MS.gene79856.t1 | MTR_4g076470 | 33.025 | 324 | 200 | 7 | 26 | 349 | 23 | 329 | 8.02e-54 | 184 |
| MS.gene79856.t1 | MTR_4g124440 | 28.664 | 464 | 296 | 18 | 1 | 444 | 1 | 449 | 3.95e-53 | 187 |
| MS.gene79856.t1 | MTR_4g076440 | 32.716 | 324 | 201 | 7 | 26 | 349 | 23 | 329 | 1.57e-52 | 181 |
| MS.gene79856.t1 | MTR_4g076255 | 33.642 | 324 | 198 | 7 | 26 | 349 | 25 | 331 | 2.00e-52 | 181 |
| MS.gene79856.t1 | MTR_2g034470 | 32.432 | 333 | 201 | 7 | 24 | 349 | 28 | 343 | 4.99e-52 | 180 |
| MS.gene79856.t1 | MTR_8g092070 | 29.047 | 451 | 286 | 17 | 26 | 455 | 34 | 471 | 2.56e-51 | 184 |
| MS.gene79856.t1 | MTR_2g034480 | 32.164 | 342 | 216 | 9 | 11 | 348 | 10 | 339 | 5.61e-51 | 177 |
| MS.gene79856.t1 | MTR_2g034470 | 32.399 | 321 | 193 | 7 | 36 | 349 | 5 | 308 | 7.79e-51 | 176 |
| MS.gene79856.t1 | MTR_7g085390 | 29.274 | 468 | 286 | 20 | 4 | 446 | 3 | 450 | 1.54e-49 | 177 |
| MS.gene79856.t1 | MTR_1g052430 | 31.290 | 310 | 204 | 4 | 26 | 335 | 32 | 332 | 2.85e-49 | 174 |
| MS.gene79856.t1 | MTR_3g095050 | 29.806 | 463 | 284 | 22 | 7 | 446 | 11 | 455 | 1.03e-47 | 172 |
| MS.gene79856.t1 | MTR_3g031770 | 29.841 | 439 | 270 | 15 | 26 | 446 | 27 | 445 | 2.18e-47 | 171 |
| MS.gene79856.t1 | MTR_7g081370 | 30.409 | 342 | 209 | 10 | 6 | 346 | 10 | 323 | 1.11e-46 | 165 |
| MS.gene79856.t1 | MTR_6g032820 | 29.176 | 425 | 266 | 17 | 26 | 429 | 26 | 436 | 1.99e-44 | 162 |
| MS.gene79856.t1 | MTR_5g081720 | 32.915 | 319 | 202 | 9 | 42 | 357 | 53 | 362 | 4.86e-39 | 146 |
| MS.gene79856.t1 | MTR_4g134280 | 29.683 | 347 | 217 | 14 | 114 | 446 | 3 | 336 | 9.65e-36 | 137 |
| MS.gene79856.t1 | MTR_5g097420 | 50.588 | 85 | 42 | 0 | 362 | 446 | 30 | 114 | 3.69e-26 | 103 |
| MS.gene79856.t1 | MTR_4g133730 | 42.574 | 101 | 53 | 1 | 346 | 446 | 17 | 112 | 2.08e-24 | 98.2 |
| MS.gene79856.t1 | MTR_8g089400 | 47.126 | 87 | 46 | 0 | 361 | 447 | 36 | 122 | 8.07e-23 | 95.1 |
| MS.gene79856.t1 | MTR_8g085390 | 39.695 | 131 | 70 | 2 | 359 | 481 | 27 | 156 | 2.22e-22 | 94.7 |
| MS.gene79856.t1 | MTR_8g089400 | 47.126 | 87 | 46 | 0 | 361 | 447 | 56 | 142 | 2.43e-22 | 94.4 |
| MS.gene79856.t1 | MTR_4g133735 | 41.584 | 101 | 54 | 1 | 346 | 446 | 17 | 112 | 7.12e-22 | 91.3 |
| MS.gene79856.t1 | MTR_4g079530 | 40.323 | 124 | 68 | 2 | 362 | 485 | 37 | 154 | 4.27e-21 | 90.9 |
| MS.gene79856.t1 | MTR_3g048280 | 41.509 | 106 | 61 | 1 | 341 | 446 | 91 | 195 | 2.78e-20 | 89.4 |
| MS.gene79856.t1 | MTR_5g091650 | 45.361 | 97 | 52 | 1 | 358 | 454 | 104 | 199 | 6.08e-20 | 90.1 |
| MS.gene79856.t1 | MTR_4g079530 | 44.706 | 85 | 47 | 0 | 362 | 446 | 37 | 121 | 1.02e-19 | 85.5 |
| MS.gene79856.t1 | MTR_5g091650 | 47.191 | 89 | 46 | 1 | 358 | 446 | 104 | 191 | 1.41e-19 | 87.0 |
| MS.gene79856.t1 | MTR_4g083070 | 43.519 | 108 | 56 | 3 | 343 | 449 | 5 | 108 | 4.39e-19 | 85.9 |
| MS.gene79856.t1 | MTR_4g109490 | 49.438 | 89 | 43 | 2 | 358 | 446 | 20 | 106 | 7.37e-19 | 85.9 |
| MS.gene79856.t1 | MTR_2g049670 | 46.739 | 92 | 47 | 2 | 362 | 453 | 158 | 247 | 8.22e-19 | 87.8 |
| MS.gene79856.t1 | MTR_5g015720 | 45.455 | 88 | 47 | 1 | 360 | 446 | 327 | 414 | 2.49e-18 | 87.4 |
| MS.gene79856.t1 | MTR_8g085400 | 42.697 | 89 | 47 | 2 | 352 | 440 | 23 | 107 | 2.90e-18 | 80.9 |
| MS.gene79856.t1 | MTR_7g111600 | 42.353 | 85 | 48 | 1 | 362 | 446 | 160 | 243 | 3.67e-18 | 84.7 |
| MS.gene79856.t1 | MTR_7g111600 | 42.353 | 85 | 48 | 1 | 362 | 446 | 160 | 243 | 4.97e-18 | 85.1 |
| MS.gene79856.t1 | MTR_7g111600 | 42.353 | 85 | 48 | 1 | 362 | 446 | 160 | 243 | 8.40e-18 | 84.7 |
| MS.gene79856.t1 | MTR_1g084820 | 45.783 | 83 | 43 | 2 | 360 | 442 | 418 | 498 | 1.30e-17 | 86.3 |
| MS.gene79856.t1 | MTR_1g084820 | 45.783 | 83 | 43 | 2 | 360 | 442 | 418 | 498 | 1.35e-17 | 86.3 |
| MS.gene79856.t1 | MTR_8g088120 | 46.835 | 79 | 41 | 1 | 374 | 452 | 60 | 137 | 6.44e-17 | 80.1 |
| MS.gene79856.t1 | MTR_3g082080 | 46.835 | 79 | 41 | 1 | 362 | 440 | 157 | 234 | 1.11e-16 | 80.1 |
| MS.gene79856.t1 | MTR_8g085440 | 39.773 | 88 | 52 | 1 | 359 | 446 | 29 | 115 | 1.12e-16 | 76.6 |
| MS.gene79856.t1 | MTR_1g116870 | 42.169 | 83 | 47 | 1 | 362 | 444 | 276 | 357 | 1.45e-16 | 81.6 |
| MS.gene79856.t1 | MTR_5g044530 | 41.111 | 90 | 50 | 2 | 362 | 449 | 22 | 110 | 8.54e-16 | 77.8 |
| MS.gene79856.t1 | MTR_2g072500 | 36.264 | 91 | 56 | 1 | 357 | 447 | 3 | 91 | 2.13e-14 | 69.3 |
| MS.gene79856.t1 | MTR_8g085420 | 36.905 | 84 | 52 | 1 | 359 | 442 | 29 | 111 | 8.57e-14 | 68.9 |
| MS.gene79856.t1 | MTR_4g036775 | 41.573 | 89 | 46 | 3 | 259 | 347 | 94 | 176 | 7.91e-13 | 68.2 |
| MS.gene79856.t1 | MTR_4g036680 | 43.333 | 90 | 43 | 5 | 259 | 347 | 94 | 176 | 8.87e-13 | 68.2 |
| MS.gene79856.t1 | MTR_2g449880 | 67.442 | 43 | 14 | 0 | 390 | 432 | 227 | 269 | 3.65e-11 | 65.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene79856.t1 | AT3G13560 | 61.875 | 480 | 180 | 3 | 1 | 479 | 1 | 478 | 0.0 | 623 |
| MS.gene79856.t1 | AT3G13560 | 61.875 | 480 | 180 | 3 | 1 | 479 | 1 | 478 | 0.0 | 623 |
| MS.gene79856.t1 | AT3G13560 | 61.875 | 480 | 180 | 3 | 1 | 479 | 1 | 478 | 0.0 | 623 |
| MS.gene79856.t1 | AT3G13560 | 61.875 | 480 | 180 | 3 | 1 | 479 | 1 | 478 | 0.0 | 623 |
| MS.gene79856.t1 | AT3G13560 | 61.875 | 480 | 180 | 3 | 1 | 479 | 1 | 478 | 0.0 | 623 |
| MS.gene79856.t1 | AT2G01630 | 50.000 | 440 | 215 | 3 | 24 | 459 | 21 | 459 | 1.98e-165 | 477 |
| MS.gene79856.t1 | AT2G01630 | 50.358 | 419 | 205 | 2 | 24 | 440 | 21 | 438 | 2.56e-161 | 464 |
| MS.gene79856.t1 | AT1G66250 | 46.234 | 478 | 247 | 6 | 23 | 497 | 29 | 499 | 7.99e-158 | 458 |
| MS.gene79856.t1 | AT1G11820 | 49.535 | 430 | 214 | 2 | 25 | 452 | 43 | 471 | 2.54e-157 | 457 |
| MS.gene79856.t1 | AT1G11820 | 49.522 | 418 | 208 | 2 | 25 | 440 | 43 | 459 | 4.81e-151 | 440 |
| MS.gene79856.t1 | AT2G01630 | 50.136 | 367 | 180 | 2 | 24 | 388 | 21 | 386 | 1.93e-136 | 399 |
| MS.gene79856.t1 | AT2G05790 | 39.509 | 448 | 240 | 5 | 26 | 446 | 25 | 468 | 1.60e-117 | 354 |
| MS.gene79856.t1 | AT5G56590 | 39.679 | 436 | 246 | 6 | 23 | 446 | 23 | 453 | 1.43e-111 | 340 |
| MS.gene79856.t1 | AT1G11820 | 48.624 | 327 | 167 | 1 | 25 | 351 | 43 | 368 | 4.01e-108 | 327 |
| MS.gene79856.t1 | AT4G29360 | 36.638 | 464 | 258 | 4 | 15 | 446 | 16 | 475 | 1.41e-107 | 330 |
| MS.gene79856.t1 | AT4G29360 | 36.543 | 457 | 254 | 4 | 22 | 446 | 33 | 485 | 1.45e-106 | 328 |
| MS.gene79856.t1 | AT5G55180 | 36.697 | 436 | 259 | 5 | 24 | 446 | 25 | 456 | 1.56e-104 | 320 |
| MS.gene79856.t1 | AT4G26830 | 35.841 | 452 | 274 | 6 | 6 | 446 | 5 | 451 | 1.47e-102 | 315 |
| MS.gene79856.t1 | AT5G55180 | 36.977 | 430 | 254 | 5 | 25 | 441 | 26 | 451 | 3.06e-102 | 315 |
| MS.gene79856.t1 | AT4G26830 | 36.636 | 434 | 259 | 6 | 24 | 446 | 27 | 455 | 8.91e-102 | 313 |
| MS.gene79856.t1 | AT5G24318 | 36.166 | 459 | 265 | 11 | 3 | 446 | 10 | 455 | 2.13e-96 | 299 |
| MS.gene79856.t1 | AT4G34480 | 38.051 | 431 | 250 | 7 | 25 | 446 | 25 | 447 | 1.38e-95 | 298 |
| MS.gene79856.t1 | AT2G16230 | 36.323 | 446 | 266 | 5 | 24 | 461 | 23 | 458 | 1.22e-94 | 296 |
| MS.gene79856.t1 | AT5G24318 | 35.982 | 453 | 262 | 11 | 3 | 440 | 10 | 449 | 3.94e-93 | 290 |
| MS.gene79856.t1 | AT3G07320 | 33.638 | 437 | 266 | 9 | 27 | 446 | 26 | 455 | 1.71e-82 | 263 |
| MS.gene79856.t1 | AT4G14080 | 31.973 | 441 | 279 | 7 | 22 | 446 | 38 | 473 | 5.15e-80 | 257 |
| MS.gene79856.t1 | AT3G55430 | 33.186 | 452 | 270 | 15 | 9 | 446 | 16 | 449 | 3.63e-79 | 254 |
| MS.gene79856.t1 | AT3G23770 | 32.432 | 444 | 276 | 7 | 22 | 446 | 33 | 471 | 2.30e-77 | 250 |
| MS.gene79856.t1 | AT4G34480 | 38.889 | 342 | 192 | 7 | 114 | 446 | 3 | 336 | 1.91e-72 | 235 |
| MS.gene79856.t1 | AT1G32860 | 36.086 | 327 | 201 | 5 | 26 | 349 | 29 | 350 | 7.56e-72 | 234 |
| MS.gene79856.t1 | AT5G24318 | 36.615 | 325 | 184 | 7 | 135 | 446 | 1 | 316 | 6.93e-71 | 228 |
| MS.gene79856.t1 | AT1G30080 | 36.977 | 311 | 191 | 3 | 26 | 335 | 36 | 342 | 2.85e-69 | 226 |
| MS.gene79856.t1 | AT1G30080 | 36.977 | 311 | 191 | 3 | 26 | 335 | 36 | 342 | 6.53e-69 | 226 |
| MS.gene79856.t1 | AT2G27500 | 34.769 | 325 | 207 | 3 | 21 | 344 | 24 | 344 | 2.46e-68 | 224 |
| MS.gene79856.t1 | AT2G27500 | 34.769 | 325 | 207 | 3 | 21 | 344 | 24 | 344 | 5.68e-68 | 223 |
| MS.gene79856.t1 | AT4G18340 | 34.943 | 352 | 219 | 6 | 11 | 358 | 17 | 362 | 8.22e-68 | 223 |
| MS.gene79856.t1 | AT4G18340 | 34.943 | 352 | 219 | 6 | 11 | 358 | 17 | 362 | 2.78e-67 | 222 |
| MS.gene79856.t1 | AT5G42720 | 37.700 | 313 | 190 | 3 | 25 | 335 | 25 | 334 | 1.09e-66 | 221 |
| MS.gene79856.t1 | AT3G15800 | 37.309 | 327 | 197 | 5 | 12 | 335 | 30 | 351 | 1.91e-66 | 219 |
| MS.gene79856.t1 | AT2G26600 | 34.857 | 350 | 216 | 5 | 20 | 361 | 25 | 370 | 1.84e-65 | 217 |
| MS.gene79856.t1 | AT4G34480 | 36.170 | 329 | 205 | 4 | 25 | 352 | 25 | 349 | 8.31e-65 | 214 |
| MS.gene79856.t1 | AT5G24318 | 35.119 | 336 | 204 | 7 | 3 | 335 | 10 | 334 | 8.50e-64 | 212 |
| MS.gene79856.t1 | AT4G16260 | 37.283 | 346 | 204 | 8 | 6 | 351 | 5 | 337 | 3.59e-63 | 209 |
| MS.gene79856.t1 | AT5G42100 | 34.154 | 325 | 205 | 6 | 26 | 346 | 27 | 346 | 2.66e-61 | 207 |
| MS.gene79856.t1 | AT5G42100 | 34.154 | 325 | 205 | 6 | 26 | 346 | 27 | 346 | 3.19e-61 | 206 |
| MS.gene79856.t1 | AT4G16260 | 37.658 | 316 | 185 | 7 | 36 | 351 | 5 | 308 | 7.34e-61 | 202 |
| MS.gene79856.t1 | AT3G61810 | 34.242 | 330 | 199 | 6 | 26 | 349 | 55 | 372 | 2.85e-60 | 202 |
| MS.gene79856.t1 | AT2G39640 | 32.258 | 434 | 256 | 16 | 26 | 444 | 30 | 440 | 3.67e-60 | 207 |
| MS.gene79856.t1 | AT2G39640 | 31.707 | 123 | 80 | 3 | 333 | 452 | 428 | 549 | 9.38e-12 | 67.8 |
| MS.gene79856.t1 | AT4G31140 | 31.193 | 436 | 271 | 17 | 26 | 446 | 27 | 448 | 4.36e-58 | 200 |
| MS.gene79856.t1 | AT3G57270 | 35.455 | 330 | 201 | 8 | 20 | 348 | 21 | 339 | 5.32e-56 | 190 |
| MS.gene79856.t1 | AT5G64790 | 28.782 | 476 | 299 | 16 | 11 | 466 | 14 | 469 | 4.09e-55 | 192 |
| MS.gene79856.t1 | AT5G20870 | 30.349 | 458 | 286 | 17 | 11 | 446 | 13 | 459 | 5.18e-55 | 192 |
| MS.gene79856.t1 | AT5G58090 | 29.841 | 439 | 275 | 17 | 26 | 446 | 22 | 445 | 1.80e-53 | 187 |
| MS.gene79856.t1 | AT2G27500 | 34.074 | 270 | 173 | 3 | 76 | 344 | 1 | 266 | 2.31e-53 | 182 |
| MS.gene79856.t1 | AT2G19440 | 30.989 | 455 | 281 | 17 | 10 | 446 | 5 | 444 | 4.07e-52 | 184 |
| MS.gene79856.t1 | AT2G19440 | 30.989 | 455 | 281 | 17 | 10 | 446 | 5 | 444 | 4.07e-52 | 184 |
| MS.gene79856.t1 | AT3G24330 | 29.345 | 443 | 274 | 17 | 26 | 446 | 39 | 464 | 1.15e-51 | 183 |
| MS.gene79856.t1 | AT3G57260 | 33.333 | 339 | 210 | 7 | 11 | 349 | 17 | 339 | 1.09e-50 | 176 |
| MS.gene79856.t1 | AT3G57260 | 33.333 | 339 | 210 | 7 | 11 | 349 | 33 | 355 | 1.87e-50 | 176 |
| MS.gene79856.t1 | AT4G17180 | 31.111 | 450 | 273 | 17 | 13 | 446 | 12 | 440 | 2.80e-50 | 179 |
| MS.gene79856.t1 | AT5G58480 | 30.652 | 460 | 274 | 19 | 7 | 447 | 12 | 445 | 2.89e-50 | 179 |
| MS.gene79856.t1 | AT2G26600 | 35.531 | 273 | 167 | 4 | 94 | 361 | 8 | 276 | 3.26e-50 | 174 |
| MS.gene79856.t1 | AT1G64760 | 30.501 | 459 | 281 | 17 | 10 | 446 | 6 | 448 | 8.27e-50 | 177 |
| MS.gene79856.t1 | AT1G64760 | 30.501 | 459 | 281 | 17 | 10 | 446 | 6 | 448 | 8.27e-50 | 177 |
| MS.gene79856.t1 | AT3G46570 | 34.925 | 335 | 203 | 11 | 26 | 355 | 27 | 351 | 4.40e-49 | 172 |
| MS.gene79856.t1 | AT3G04010 | 29.176 | 449 | 266 | 19 | 26 | 446 | 33 | 457 | 1.49e-48 | 174 |
| MS.gene79856.t1 | AT3G57240 | 34.194 | 310 | 188 | 8 | 26 | 335 | 35 | 328 | 6.11e-48 | 169 |
| MS.gene79856.t1 | AT5G18220 | 27.564 | 468 | 300 | 18 | 2 | 446 | 4 | 455 | 2.59e-47 | 171 |
| MS.gene79856.t1 | AT3G55780 | 32.915 | 319 | 204 | 8 | 39 | 354 | 48 | 359 | 7.71e-45 | 162 |
| MS.gene79856.t1 | AT5G20330 | 29.721 | 323 | 213 | 7 | 26 | 346 | 34 | 344 | 4.13e-44 | 159 |
| MS.gene79856.t1 | AT5G20390 | 29.023 | 348 | 230 | 8 | 3 | 346 | 9 | 343 | 3.13e-43 | 156 |
| MS.gene79856.t1 | AT5G20340 | 30.462 | 325 | 208 | 9 | 26 | 346 | 43 | 353 | 3.18e-43 | 157 |
| MS.gene79856.t1 | AT1G77780 | 29.697 | 330 | 219 | 9 | 15 | 344 | 14 | 330 | 2.97e-42 | 154 |
| MS.gene79856.t1 | AT1G33220 | 28.239 | 301 | 201 | 6 | 26 | 323 | 34 | 322 | 5.67e-41 | 150 |
| MS.gene79856.t1 | AT1G77790 | 28.402 | 338 | 228 | 8 | 2 | 335 | 4 | 331 | 2.64e-40 | 149 |
| MS.gene79856.t1 | AT5G20560 | 26.364 | 330 | 229 | 8 | 9 | 335 | 16 | 334 | 3.49e-35 | 134 |
| MS.gene79856.t1 | AT5G35740 | 47.191 | 89 | 46 | 1 | 359 | 446 | 27 | 115 | 2.66e-26 | 103 |
| MS.gene79856.t1 | AT2G04910 | 48.193 | 83 | 43 | 0 | 362 | 444 | 15 | 97 | 4.81e-24 | 97.1 |
| MS.gene79856.t1 | AT1G66870 | 37.313 | 134 | 67 | 2 | 325 | 446 | 9 | 137 | 5.45e-24 | 97.8 |
| MS.gene79856.t1 | AT1G66870 | 44.944 | 89 | 49 | 0 | 358 | 446 | 22 | 110 | 3.29e-23 | 94.7 |
| MS.gene79856.t1 | AT5G67460 | 48.864 | 88 | 45 | 0 | 362 | 449 | 293 | 380 | 1.48e-22 | 99.8 |
| MS.gene79856.t1 | AT4G13600 | 40.541 | 111 | 64 | 2 | 362 | 472 | 61 | 169 | 9.56e-22 | 94.4 |
| MS.gene79856.t1 | AT2G30933 | 46.154 | 91 | 48 | 1 | 360 | 450 | 80 | 169 | 1.71e-21 | 93.6 |
| MS.gene79856.t1 | AT5G67460 | 51.899 | 79 | 38 | 0 | 362 | 440 | 293 | 371 | 3.07e-21 | 95.9 |
| MS.gene79856.t1 | AT1G66852 | 43.478 | 92 | 51 | 1 | 355 | 446 | 19 | 109 | 3.90e-21 | 89.0 |
| MS.gene79856.t1 | AT1G18650 | 43.750 | 96 | 53 | 1 | 356 | 451 | 15 | 109 | 6.36e-21 | 90.9 |
| MS.gene79856.t1 | AT1G66855 | 41.573 | 89 | 52 | 0 | 359 | 447 | 23 | 111 | 6.68e-21 | 88.2 |
| MS.gene79856.t1 | AT5G63240 | 40.230 | 87 | 50 | 1 | 362 | 446 | 40 | 126 | 1.29e-20 | 88.2 |
| MS.gene79856.t1 | AT1G18650 | 43.750 | 96 | 53 | 1 | 356 | 451 | 15 | 109 | 1.39e-20 | 88.2 |
| MS.gene79856.t1 | AT2G04910 | 45.679 | 81 | 44 | 0 | 361 | 441 | 14 | 94 | 1.43e-20 | 87.8 |
| MS.gene79856.t1 | AT3G58100 | 39.362 | 94 | 57 | 0 | 362 | 455 | 41 | 134 | 3.11e-20 | 88.6 |
| MS.gene79856.t1 | AT3G58100 | 39.362 | 94 | 57 | 0 | 362 | 455 | 117 | 210 | 5.01e-20 | 90.1 |
| MS.gene79856.t1 | AT1G29380 | 44.444 | 90 | 49 | 1 | 362 | 451 | 148 | 236 | 4.44e-19 | 87.4 |
| MS.gene79856.t1 | AT4G16165 | 38.710 | 93 | 57 | 0 | 355 | 447 | 19 | 111 | 4.89e-19 | 83.2 |
| MS.gene79856.t1 | AT4G05430 | 43.158 | 95 | 53 | 1 | 361 | 454 | 47 | 141 | 6.42e-19 | 84.7 |
| MS.gene79856.t1 | AT4G05430 | 43.158 | 95 | 53 | 1 | 361 | 454 | 22 | 116 | 6.46e-19 | 83.6 |
| MS.gene79856.t1 | AT2G30933 | 46.914 | 81 | 42 | 1 | 360 | 440 | 80 | 159 | 7.16e-19 | 84.0 |
| MS.gene79856.t1 | AT2G30933 | 46.914 | 81 | 42 | 1 | 360 | 440 | 80 | 159 | 7.16e-19 | 84.0 |
| MS.gene79856.t1 | AT1G29380 | 45.783 | 83 | 44 | 1 | 362 | 444 | 148 | 229 | 1.36e-18 | 87.0 |
| MS.gene79856.t1 | AT1G09460 | 44.792 | 96 | 50 | 2 | 358 | 453 | 133 | 225 | 4.12e-18 | 85.9 |
| MS.gene79856.t1 | AT5G61130 | 41.758 | 91 | 52 | 1 | 356 | 446 | 15 | 104 | 1.04e-17 | 82.0 |
| MS.gene79856.t1 | AT1G79480 | 42.529 | 87 | 49 | 1 | 358 | 444 | 307 | 392 | 1.52e-17 | 85.1 |
| MS.gene79856.t1 | AT4G09462 | 38.889 | 90 | 54 | 1 | 358 | 447 | 25 | 113 | 1.59e-17 | 79.0 |
| MS.gene79856.t1 | AT1G79480 | 42.529 | 87 | 49 | 1 | 358 | 444 | 306 | 391 | 1.70e-17 | 84.7 |
| MS.gene79856.t1 | AT4G09465 | 37.500 | 96 | 59 | 1 | 352 | 447 | 21 | 115 | 2.68e-17 | 78.2 |
| MS.gene79856.t1 | AT4G09467 | 37.500 | 96 | 59 | 1 | 352 | 447 | 21 | 115 | 2.68e-17 | 78.2 |
| MS.gene79856.t1 | AT4G09464 | 37.500 | 96 | 59 | 1 | 352 | 447 | 21 | 115 | 2.68e-17 | 78.2 |
| MS.gene79856.t1 | AT4G05430 | 42.500 | 80 | 46 | 0 | 361 | 440 | 47 | 126 | 2.12e-16 | 76.3 |
| MS.gene79856.t1 | AT1G29380 | 43.902 | 82 | 45 | 1 | 362 | 443 | 148 | 228 | 2.46e-16 | 78.6 |
| MS.gene79856.t1 | AT1G29380 | 43.902 | 82 | 45 | 1 | 362 | 443 | 148 | 228 | 2.46e-16 | 78.6 |
| MS.gene79856.t1 | AT2G43670 | 37.079 | 89 | 54 | 1 | 358 | 446 | 31 | 117 | 3.92e-16 | 75.1 |
| MS.gene79856.t1 | AT5G63225 | 39.326 | 89 | 53 | 1 | 358 | 446 | 21 | 108 | 5.85e-16 | 74.3 |
| MS.gene79856.t1 | AT4G09466 | 35.417 | 96 | 61 | 1 | 352 | 447 | 21 | 115 | 9.92e-16 | 73.9 |
| MS.gene79856.t1 | AT1G69295 | 42.222 | 90 | 50 | 2 | 354 | 443 | 13 | 100 | 1.66e-15 | 76.3 |
| MS.gene79856.t1 | AT4G09090 | 38.202 | 89 | 54 | 1 | 358 | 446 | 27 | 114 | 1.88e-15 | 73.2 |
| MS.gene79856.t1 | AT5G63250 | 35.185 | 108 | 62 | 2 | 341 | 446 | 27 | 128 | 2.58e-15 | 73.2 |
| MS.gene79856.t1 | AT1G69295 | 43.373 | 83 | 45 | 2 | 361 | 443 | 16 | 96 | 1.42e-14 | 73.2 |
| MS.gene79856.t1 | AT1G26450 | 45.679 | 81 | 42 | 2 | 354 | 434 | 13 | 91 | 1.74e-14 | 72.4 |
| MS.gene79856.t1 | AT2G03505 | 36.145 | 83 | 52 | 1 | 358 | 440 | 17 | 98 | 2.51e-14 | 69.7 |
| MS.gene79856.t1 | AT2G03505 | 35.106 | 94 | 58 | 2 | 358 | 449 | 17 | 109 | 2.53e-14 | 71.2 |
| MS.gene79856.t1 | AT2G03505 | 35.106 | 94 | 58 | 2 | 358 | 449 | 17 | 109 | 2.53e-14 | 71.2 |
| MS.gene79856.t1 | AT2G03505 | 35.106 | 94 | 58 | 2 | 358 | 449 | 17 | 109 | 2.53e-14 | 71.2 |
| MS.gene79856.t1 | AT2G29735 | 38.462 | 91 | 53 | 2 | 358 | 446 | 27 | 116 | 8.91e-14 | 68.2 |
| MS.gene79856.t1 | AT1G78520 | 35.227 | 88 | 55 | 1 | 359 | 446 | 29 | 114 | 1.30e-13 | 67.8 |
| MS.gene79856.t1 | AT5G53600 | 32.184 | 87 | 57 | 1 | 360 | 446 | 27 | 111 | 4.23e-13 | 66.2 |
| MS.gene79856.t1 | AT5G53610 | 32.584 | 89 | 58 | 1 | 358 | 446 | 24 | 110 | 8.13e-13 | 65.5 |
| MS.gene79856.t1 | AT5G63230 | 35.955 | 89 | 56 | 1 | 358 | 446 | 22 | 109 | 1.01e-12 | 65.1 |
| MS.gene79856.t1 | AT5G08000 | 37.363 | 91 | 56 | 1 | 356 | 446 | 15 | 104 | 5.57e-12 | 65.1 |
| MS.gene79856.t1 | AT2G43660 | 32.558 | 86 | 58 | 0 | 361 | 446 | 34 | 119 | 9.62e-12 | 62.8 |
| MS.gene79856.t1 | AT2G43660 | 32.558 | 86 | 58 | 0 | 361 | 446 | 33 | 118 | 1.06e-11 | 62.4 |
| MS.gene79856.t1 | AT5G08000 | 37.209 | 86 | 53 | 1 | 361 | 446 | 39 | 123 | 1.95e-11 | 63.9 |
| MS.gene79856.t1 | AT1G13830 | 35.632 | 87 | 53 | 2 | 362 | 446 | 35 | 120 | 2.10e-11 | 63.9 |
| MS.gene79856.t1 | AT1G13830 | 35.632 | 87 | 53 | 2 | 362 | 446 | 21 | 106 | 2.45e-11 | 63.5 |
Find 101 sgRNAs with CRISPR-Local
Find 189 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTAAATGCTCACCCTTATTA+TGG | 0.209582 | 3.1:-65807339 | MS.gene79856:CDS |
| CTCTTCTACTAGTCTACTTT+TGG | 0.219586 | 3.1:-65805511 | MS.gene79856:CDS |
| CCTTTAGTATATCCATAATA+AGG | 0.275337 | 3.1:+65807327 | None:intergenic |
| AGGAGAGTACTTAATGATTC+AGG | 0.289249 | 3.1:-65807048 | MS.gene79856:CDS |
| GCTACTGTAAACAATGTATT+AGG | 0.301390 | 3.1:-65808488 | MS.gene79856:intron |
| CTTCAACGCCGGTGTTTGAT+AGG | 0.307975 | 3.1:+65807727 | None:intergenic |
| CATTAAATTTCAATGATATA+CGG | 0.312439 | 3.1:-65807167 | MS.gene79856:CDS |
| CCTAATCAAATTATTATTGT+AGG | 0.316111 | 3.1:+65807068 | None:intergenic |
| CGGATCATTGTCACAGAAAC+TGG | 0.324873 | 3.1:-65807147 | MS.gene79856:CDS |
| GAAACTGGTTGGCCACATTT+AGG | 0.331009 | 3.1:-65807132 | MS.gene79856:CDS |
| CCAGCACCAATAGGACTTAC+AGG | 0.369992 | 3.1:+65805570 | None:intergenic |
| ACAAGAACACGAGCAACATT+TGG | 0.372068 | 3.1:+65807555 | None:intergenic |
| TGAAAAGATGGAAGCTGGTT+TGG | 0.374705 | 3.1:-65806815 | MS.gene79856:CDS |
| CCTACAATAATAATTTGATT+AGG | 0.390318 | 3.1:-65807068 | MS.gene79856:CDS |
| CTGGGCTTGCGGAGAAGGCC+GGG | 0.392967 | 3.1:-65806791 | MS.gene79856:CDS |
| ACCTATATCTGAAAGACATT+GGG | 0.397818 | 3.1:-65806953 | MS.gene79856:CDS |
| GACGAAGAAATATTGAGAAT+TGG | 0.401023 | 3.1:-65807687 | MS.gene79856:CDS |
| ACTGGGCTTGCGGAGAAGGC+CGG | 0.403590 | 3.1:-65806792 | MS.gene79856:CDS |
| TTGGACTGGGCTTGCGGAGA+AGG | 0.404683 | 3.1:-65806796 | MS.gene79856:CDS |
| AAACTAGCGTCCGGTTCGTT+AGG | 0.408986 | 3.1:+65807105 | None:intergenic |
| CGGAGTAAAGCATATTCAAT+TGG | 0.412645 | 3.1:+65807291 | None:intergenic |
| AGATGGAAGCTGGTTTGGAC+TGG | 0.413864 | 3.1:-65806810 | MS.gene79856:CDS |
| TTTGGACCTGTAAGTCCTAT+TGG | 0.417869 | 3.1:-65805576 | MS.gene79856:CDS |
| GTAGAAGGAGGAAAAGGCTT+AGG | 0.421008 | 3.1:+65807441 | None:intergenic |
| TTTGATGAAGATAAGAGAAT+AGG | 0.422141 | 3.1:-65806976 | MS.gene79856:CDS |
| GAGTTAAAAGTGGCTGTAGA+AGG | 0.422615 | 3.1:+65807426 | None:intergenic |
| ATAATCATTATAAGCATAAG+AGG | 0.428971 | 3.1:+65806705 | None:intergenic |
| AACTTGAGCACGGGTGGTGA+TGG | 0.431835 | 3.1:-65805618 | MS.gene79856:CDS |
| TATGATGTAGGTGCATTTGT+GGG | 0.437475 | 3.1:-65807870 | MS.gene79856:intron |
| AAACTTTGACGCGGAAATGA+AGG | 0.439597 | 3.1:+65807490 | None:intergenic |
| CAAGAACACGAGCAACATTT+GGG | 0.450275 | 3.1:+65807556 | None:intergenic |
| AACTGTGCAGCTATTCAAGC+TGG | 0.464051 | 3.1:-65806766 | MS.gene79856:CDS |
| CCCCAATGTCTTTCAGATAT+AGG | 0.465833 | 3.1:+65806952 | None:intergenic |
| CCTGTAAGTCCTATTGGTGC+TGG | 0.466516 | 3.1:-65805570 | MS.gene79856:CDS |
| TGACAGTATGTTTGATGCTA+TGG | 0.468256 | 3.1:-65807217 | MS.gene79856:CDS |
| GGCACTGTGAAGATGATTCA+TGG | 0.472035 | 3.1:+65807527 | None:intergenic |
| GATGGAAGCTGGTTTGGACT+GGG | 0.472061 | 3.1:-65806809 | MS.gene79856:CDS |
| GTATGATGTAGGTGCATTTG+TGG | 0.481676 | 3.1:-65807871 | MS.gene79856:intron |
| CTTTAGTATATCCATAATAA+GGG | 0.487078 | 3.1:+65807328 | None:intergenic |
| AATTCTCAATATTTCTTCGT+CGG | 0.489082 | 3.1:+65807689 | None:intergenic |
| GACCTATATCTGAAAGACAT+TGG | 0.495328 | 3.1:-65806954 | MS.gene79856:CDS |
| TTCTCCTAGTCAACCGATGA+TGG | 0.501901 | 3.1:-65807025 | MS.gene79856:CDS |
| CTCCATCAGTGGCTGCATCA+TGG | 0.502111 | 3.1:-65807659 | MS.gene79856:CDS |
| ATGAAGGTTTGAAGCAACTA+AGG | 0.507056 | 3.1:+65807506 | None:intergenic |
| ACCGGCGTTGAAGTCCTTGT+TGG | 0.507660 | 3.1:-65807717 | MS.gene79856:CDS |
| TTCAACGCCGGTGTTTGATA+GGG | 0.509490 | 3.1:+65807728 | None:intergenic |
| AACTTCAATCCAGCACCAAT+AGG | 0.509537 | 3.1:+65805561 | None:intergenic |
| AGTTTCGACGCCTCAGTCCA+TGG | 0.513215 | 3.1:-65807472 | MS.gene79856:CDS |
| AGGCTTAGGGATTAAATCCA+TGG | 0.514185 | 3.1:+65807455 | None:intergenic |
| TGGCGCGGACGCTGAAAAGA+TGG | 0.514463 | 3.1:-65806827 | MS.gene79856:CDS |
| TCATAACGGAATAATGTGTT+CGG | 0.519391 | 3.1:+65807237 | None:intergenic |
| ATCCATGATGCAGCCACTGA+TGG | 0.520575 | 3.1:+65807657 | None:intergenic |
| GAATAGCTGCACAGTTTGCC+CGG | 0.523260 | 3.1:+65806773 | None:intergenic |
| CCTTATTATGGATATACTAA+AGG | 0.527242 | 3.1:-65807327 | MS.gene79856:CDS |
| CATGGATCATGTGTATATGC+AGG | 0.527638 | 3.1:-65805755 | MS.gene79856:CDS |
| TAGAAGAACTAAAACTCAAA+GGG | 0.531024 | 3.1:+65806896 | None:intergenic |
| TTAGAAGAACTAAAACTCAA+AGG | 0.532144 | 3.1:+65806895 | None:intergenic |
| CATCAAACATACTGTCATAA+CGG | 0.533138 | 3.1:+65807223 | None:intergenic |
| GCTGGTTTGGACTGGGCTTG+CGG | 0.533574 | 3.1:-65806802 | MS.gene79856:CDS |
| ACTTGAGCACGGGTGGTGAT+GGG | 0.535349 | 3.1:-65805617 | MS.gene79856:CDS |
| GACGCTGAAAAGATGGAAGC+TGG | 0.535957 | 3.1:-65806820 | MS.gene79856:CDS |
| AATATCACAACAATAGCAGT+TGG | 0.540102 | 3.1:-65807600 | MS.gene79856:CDS |
| CGTTAACTTACTTGGATCCT+CGG | 0.542447 | 3.1:+65806621 | None:intergenic |
| TAGAAGGAGGAAAAGGCTTA+GGG | 0.544622 | 3.1:+65807442 | None:intergenic |
| GTGGCTGTAGAAGGAGGAAA+AGG | 0.545922 | 3.1:+65807435 | None:intergenic |
| CTTCGTCGGTGACGCCAACA+AGG | 0.546156 | 3.1:+65807703 | None:intergenic |
| TTTAGGTGGACCTAACGAAC+CGG | 0.547039 | 3.1:-65807115 | MS.gene79856:CDS |
| GCCAACAAGGACTTCAACGC+CGG | 0.557159 | 3.1:+65807716 | None:intergenic |
| GCAACAATATTTGAAGCTGA+TGG | 0.558424 | 3.1:+65807816 | None:intergenic |
| ATCAGTTCTAACTTGAGCAC+GGG | 0.563571 | 3.1:-65805627 | MS.gene79856:intron |
| TTAAAAGTGGCTGTAGAAGG+AGG | 0.569222 | 3.1:+65807429 | None:intergenic |
| CTGTGAAGATGATTCATGGC+AGG | 0.571275 | 3.1:+65807531 | None:intergenic |
| AACAATAGCAGTTGGAAGTG+AGG | 0.580046 | 3.1:-65807592 | MS.gene79856:CDS |
| ATAGCCATCATCGGTTGACT+AGG | 0.580777 | 3.1:+65807021 | None:intergenic |
| ATCAAACAATTCATATAAGT+AGG | 0.587450 | 3.1:+65806993 | None:intergenic |
| TATCAGTTCTAACTTGAGCA+CGG | 0.590597 | 3.1:-65805628 | MS.gene79856:intron |
| GTTCCATGATGAGTTAAAAG+TGG | 0.590802 | 3.1:+65807416 | None:intergenic |
| TAGAAGAGAATGCATAGTGA+AGG | 0.600654 | 3.1:+65805526 | None:intergenic |
| CATTATAAGCATAAGAGGCA+TGG | 0.602398 | 3.1:+65806710 | None:intergenic |
| ACATCATTGGGGAAATAGCA+AGG | 0.603276 | 3.1:+65806739 | None:intergenic |
| ACTGGTTGGCCACATTTAGG+TGG | 0.605390 | 3.1:-65807129 | MS.gene79856:CDS |
| AAGAGTGAGCAATAACGCAC+TGG | 0.605830 | 3.1:+65808511 | None:intergenic |
| TCATTGTCACAGAAACTGGT+TGG | 0.608595 | 3.1:-65807143 | MS.gene79856:CDS |
| TATGGATATACTAAAGGAGA+CGG | 0.611436 | 3.1:-65807321 | MS.gene79856:CDS |
| ACTGTGCAGCTATTCAAGCT+GGG | 0.611715 | 3.1:-65806765 | MS.gene79856:CDS |
| ATTGTTGTGATATTTGTGTG+AGG | 0.612136 | 3.1:+65807609 | None:intergenic |
| CAGTATGTTTGATGCTATGG+TGG | 0.617131 | 3.1:-65807214 | MS.gene79856:CDS |
| AGTTCTAACTTGAGCACGGG+TGG | 0.632909 | 3.1:-65805624 | MS.gene79856:CDS |
| TAGGTATTAATAGCCATCAT+CGG | 0.632912 | 3.1:+65807012 | None:intergenic |
| TTGTGTGGCTAAAGATGGCG+CGG | 0.639037 | 3.1:-65806842 | MS.gene79856:CDS |
| TCTTTGTTGAAGGAAGGGAT+CGG | 0.640973 | 3.1:+65807271 | None:intergenic |
| ATGATGTAGGTGCATTTGTG+GGG | 0.642405 | 3.1:-65807869 | MS.gene79856:intron |
| GATCATGTGTATATGCAGGA+AGG | 0.650405 | 3.1:-65805751 | MS.gene79856:intron |
| TCGTTAGGTCCACCTAAATG+TGG | 0.659828 | 3.1:+65807120 | None:intergenic |
| AATTGGAGAATCTCCATCAG+TGG | 0.660534 | 3.1:-65807670 | MS.gene79856:CDS |
| CCTATATCTGAAAGACATTG+GGG | 0.668424 | 3.1:-65806952 | MS.gene79856:CDS |
| CTACAAGCCCTATCAAACAC+CGG | 0.677952 | 3.1:-65807735 | MS.gene79856:CDS |
| GGGATTAAATCCATGGACTG+AGG | 0.686707 | 3.1:+65807462 | None:intergenic |
| TGATGTAGGTGCATTTGTGG+GGG | 0.706821 | 3.1:-65807868 | MS.gene79856:intron |
| TACAGCTATGATAACTACCG+AGG | 0.729167 | 3.1:-65806638 | MS.gene79856:CDS |
| GAGGCGTCGAAACTTTGACG+CGG | 0.779048 | 3.1:+65807481 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTGTTATATAAAACTAATAT+TGG | - | chr3.1:65808364-65808383 | MS.gene79856:intron | 10.0% |
| !! | CATTAAATTTCAATGATATA+CGG | - | chr3.1:65806863-65806882 | MS.gene79856:CDS | 15.0% |
| !! | TTTGAGAAAATCATATAATT+CGG | - | chr3.1:65805889-65805908 | MS.gene79856:intron | 15.0% |
| !!! | TAAAATTTGTTAGCTTATTT+AGG | - | chr3.1:65807613-65807632 | MS.gene79856:CDS | 15.0% |
| !!! | TTGTATTTTGACTATAAAAA+TGG | + | chr3.1:65805768-65805787 | None:intergenic | 15.0% |
| !! | ATAATCATTATAAGCATAAG+AGG | + | chr3.1:65807328-65807347 | None:intergenic | 20.0% |
| !! | ATCAAACAATTCATATAAGT+AGG | + | chr3.1:65807040-65807059 | None:intergenic | 20.0% |
| !! | CCTAATCAAATTATTATTGT+AGG | + | chr3.1:65806965-65806984 | None:intergenic | 20.0% |
| !! | CCTACAATAATAATTTGATT+AGG | - | chr3.1:65806962-65806981 | MS.gene79856:CDS | 20.0% |
| !! | CTTTAGTATATCCATAATAA+GGG | + | chr3.1:65806705-65806724 | None:intergenic | 20.0% |
| !! | GTAACTCTAATTCATTATAA+TGG | + | chr3.1:65808329-65808348 | None:intergenic | 20.0% |
| !! | TATCAAAAAATGAATAGTGT+GGG | - | chr3.1:65807348-65807367 | MS.gene79856:CDS | 20.0% |
| !! | TCTATACAAATCTTCAATAT+AGG | + | chr3.1:65808216-65808235 | None:intergenic | 20.0% |
| !! | TTAGTGATAATCACAAAAAA+AGG | + | chr3.1:65808167-65808186 | None:intergenic | 20.0% |
| !! | TTATCAAAAAATGAATAGTG+TGG | - | chr3.1:65807347-65807366 | MS.gene79856:CDS | 20.0% |
| !! | TTATTTATCATGTATGATGT+AGG | - | chr3.1:65806148-65806167 | MS.gene79856:intron | 20.0% |
| !!! | AATTTTAAAGAATAACATCC+TGG | - | chr3.1:65806032-65806051 | MS.gene79856:intron | 20.0% |
| !!! | GTTTTTCATTTGTAAAGATT+GGG | - | chr3.1:65805694-65805713 | MS.gene79856:intron | 20.0% |
| !!! | TGTACTATGTTCTTTTTTTT+TGG | - | chr3.1:65805656-65805675 | MS.gene79856:intron | 20.0% |
| ! | AATTCTCAATATTTCTTCGT+CGG | + | chr3.1:65806344-65806363 | None:intergenic | 25.0% |
| ! | ACTTGAAAAAAATGGTGTTT+AGG | - | chr3.1:65807496-65807515 | MS.gene79856:CDS | 25.0% |
| ! | AGAATAATTGAGATTGACAA+AGG | + | chr3.1:65805584-65805603 | None:intergenic | 25.0% |
| ! | CCTTATTATGGATATACTAA+AGG | - | chr3.1:65806703-65806722 | MS.gene79856:CDS | 25.0% |
| ! | CCTTTAGTATATCCATAATA+AGG | + | chr3.1:65806706-65806725 | None:intergenic | 25.0% |
| ! | CGTTTAATCTGAATATTTCA+TGG | - | chr3.1:65808121-65808140 | MS.gene79856:intron | 25.0% |
| ! | GGTTATAAGTAATTACTTGT+TGG | - | chr3.1:65807453-65807472 | MS.gene79856:CDS | 25.0% |
| ! | GTGGTTATATGACATTATAA+AGG | + | chr3.1:65807736-65807755 | None:intergenic | 25.0% |
| ! | TAATGTGATCTAATATCAAC+TGG | + | chr3.1:65806131-65806150 | None:intergenic | 25.0% |
| ! | TAGAAGAACTAAAACTCAAA+GGG | + | chr3.1:65807137-65807156 | None:intergenic | 25.0% |
| ! | TCTTTACAAATGAAAAACCA+TGG | + | chr3.1:65805692-65805711 | None:intergenic | 25.0% |
| ! | TGCAAGTTACTTGAAAAAAA+TGG | - | chr3.1:65807488-65807507 | MS.gene79856:CDS | 25.0% |
| ! | TTAGAAGAACTAAAACTCAA+AGG | + | chr3.1:65807138-65807157 | None:intergenic | 25.0% |
| ! | TTTGATGAAGATAAGAGAAT+AGG | - | chr3.1:65807054-65807073 | MS.gene79856:CDS | 25.0% |
| !! | AATTTTCTTTGTTGAAGGAA+GGG | + | chr3.1:65806767-65806786 | None:intergenic | 25.0% |
| !! | AGAAAAATTTGAAAAGCATG+TGG | + | chr3.1:65807755-65807774 | None:intergenic | 25.0% |
| !! | AGTTCTTCTAACAAGATTTT+CGG | - | chr3.1:65807147-65807166 | MS.gene79856:CDS | 25.0% |
| !! | GAATATTTCATGGTTTTTCA+AGG | - | chr3.1:65808131-65808150 | MS.gene79856:intron | 25.0% |
| !! | GGTTTTTCATTTGTAAAGAT+TGG | - | chr3.1:65805693-65805712 | MS.gene79856:intron | 25.0% |
| !! | TAATGAGTACTTTGTTATAC+AGG | - | chr3.1:65808251-65808270 | MS.gene79856:intron | 25.0% |
| !! | TCAACAATTTTCTTTGTTGA+AGG | + | chr3.1:65806772-65806791 | None:intergenic | 25.0% |
| !! | TCATTTTCTCAAATCATAAC+CGG | + | chr3.1:65807983-65808002 | None:intergenic | 25.0% |
| !! | TCATTTTCTCAAATCATTAC+CGG | + | chr3.1:65807909-65807928 | None:intergenic | 25.0% |
| !! | TGATTTTCTCAAATTGTTAG+CGG | + | chr3.1:65805882-65805901 | None:intergenic | 25.0% |
| !!! | TTGAAAATTACGTCACTTTT+GGG | + | chr3.1:65807831-65807850 | None:intergenic | 25.0% |
| !!! | TTTTTGGTTTCATTATACCA+TGG | - | chr3.1:65805672-65805691 | MS.gene79856:intron | 25.0% |
| AAGTCCTCTAAATTATGCAA+TGG | + | chr3.1:65807783-65807802 | None:intergenic | 30.0% | |
| AATATCACAACAATAGCAGT+TGG | - | chr3.1:65806430-65806449 | MS.gene79856:intron | 30.0% | |
| AATCACAAAAAAAGGTGAAC+TGG | + | chr3.1:65808159-65808178 | None:intergenic | 30.0% | |
| ACCTATATCTGAAAGACATT+GGG | - | chr3.1:65807077-65807096 | MS.gene79856:CDS | 30.0% | |
| AGTTTGTGTTCTTCAAAAAC+TGG | + | chr3.1:65806660-65806679 | None:intergenic | 30.0% | |
| ATCACAAAAAAAGGTGAACT+GGG | + | chr3.1:65808158-65808177 | None:intergenic | 30.0% | |
| ATTGTTGTGATATTTGTGTG+AGG | + | chr3.1:65806424-65806443 | None:intergenic | 30.0% | |
| CATCAAACATACTGTCATAA+CGG | + | chr3.1:65806810-65806829 | None:intergenic | 30.0% | |
| CTGTTATAATTAGTTGCAGT+TGG | - | chr3.1:65807432-65807451 | MS.gene79856:CDS | 30.0% | |
| GAAAAGATTACAAGAATGCA+TGG | + | chr3.1:65805804-65805823 | None:intergenic | 30.0% | |
| GACGAAGAAATATTGAGAAT+TGG | - | chr3.1:65806343-65806362 | MS.gene79856:intron | 30.0% | |
| GCTACTGTAAACAATGTATT+AGG | - | chr3.1:65805542-65805561 | MS.gene79856:CDS | 30.0% | |
| TACACCATTGCATAATTTAG+AGG | - | chr3.1:65807776-65807795 | MS.gene79856:CDS | 30.0% | |
| TAGGTATTAATAGCCATCAT+CGG | + | chr3.1:65807021-65807040 | None:intergenic | 30.0% | |
| TATAACAGCGTTAACTTACT+TGG | + | chr3.1:65807420-65807439 | None:intergenic | 30.0% | |
| TATGGATATACTAAAGGAGA+CGG | - | chr3.1:65806709-65806728 | MS.gene79856:CDS | 30.0% | |
| TTAAATGCTCACCCTTATTA+TGG | - | chr3.1:65806691-65806710 | MS.gene79856:CDS | 30.0% | |
| ! | AGCTTTTCTTCTATTGCATT+TGG | - | chr3.1:65808436-65808455 | MS.gene79856:intron | 30.0% |
| ! | CAATTTTCTTTGTTGAAGGA+AGG | + | chr3.1:65806768-65806787 | None:intergenic | 30.0% |
| ! | CATTTTTCTAACGAAGTAGT+TGG | - | chr3.1:65806056-65806075 | MS.gene79856:intron | 30.0% |
| ! | TCATAACGGAATAATGTGTT+CGG | + | chr3.1:65806796-65806815 | None:intergenic | 30.0% |
| ! | TTCGGTGTAATTATATGTGT+CGG | - | chr3.1:65805907-65805926 | MS.gene79856:intron | 30.0% |
| !! | GTTGAAAATTACGTCACTTT+TGG | + | chr3.1:65807832-65807851 | None:intergenic | 30.0% |
| !!! | GGACTTTTTTACACTACTAA+TGG | - | chr3.1:65807099-65807118 | MS.gene79856:CDS | 30.0% |
| ACTTCGTTAGAAAAATGTCC+AGG | + | chr3.1:65806053-65806072 | None:intergenic | 35.0% | |
| AGTGCTTCATAGCTCATTAA+CGG | + | chr3.1:65807854-65807873 | None:intergenic | 35.0% | |
| CAAAAAATGAATAGTGTGGG+AGG | - | chr3.1:65807351-65807370 | MS.gene79856:CDS | 35.0% | |
| CATTATAAGCATAAGAGGCA+TGG | + | chr3.1:65807323-65807342 | None:intergenic | 35.0% | |
| CCTATATCTGAAAGACATTG+GGG | - | chr3.1:65807078-65807097 | MS.gene79856:CDS | 35.0% | |
| CGGAGTAAAGCATATTCAAT+TGG | + | chr3.1:65806742-65806761 | None:intergenic | 35.0% | |
| CTGAATGTAACCTTATGTGT+CGG | - | chr3.1:65808008-65808027 | MS.gene79856:intron | 35.0% | |
| GACCTATATCTGAAAGACAT+TGG | - | chr3.1:65807076-65807095 | MS.gene79856:CDS | 35.0% | |
| GTTCCATGATGAGTTAAAAG+TGG | + | chr3.1:65806617-65806636 | None:intergenic | 35.0% | |
| TAGAAGAGAATGCATAGTGA+AGG | + | chr3.1:65808507-65808526 | None:intergenic | 35.0% | |
| TATGATGTAGGTGCATTTGT+GGG | - | chr3.1:65806160-65806179 | MS.gene79856:intron | 35.0% | |
| TGACAGTATGTTTGATGCTA+TGG | - | chr3.1:65806813-65806832 | MS.gene79856:CDS | 35.0% | |
| TTGTGTTCTTCAAAAACTGG+AGG | + | chr3.1:65806657-65806676 | None:intergenic | 35.0% | |
| ! | ATGAAGGTTTGAAGCAACTA+AGG | + | chr3.1:65806527-65806546 | None:intergenic | 35.0% |
| ! | CTCAACAAGTAGCTTCTTTT+AGG | - | chr3.1:65807542-65807561 | MS.gene79856:CDS | 35.0% |
| ! | GCAACAATATTTGAAGCTGA+TGG | + | chr3.1:65806217-65806236 | None:intergenic | 35.0% |
| ! | GTAATTATATGTGTCGGTGT+CGG | - | chr3.1:65805913-65805932 | MS.gene79856:intron | 35.0% |
| ! | GTACTTTGTTATACAGGTCA+TGG | - | chr3.1:65808257-65808276 | MS.gene79856:intron | 35.0% |
| ! | TATCAGTTCTAACTTGAGCA+CGG | - | chr3.1:65808402-65808421 | MS.gene79856:intron | 35.0% |
| ! | TCTTTTTGTGTGGCTAAAGA+TGG | - | chr3.1:65807183-65807202 | MS.gene79856:CDS | 35.0% |
| ! | TTCTTCGAAGTCTTTTTGTG+TGG | - | chr3.1:65807173-65807192 | MS.gene79856:CDS | 35.0% |
| !! | AATTGAGTTAGAGTGTTGCA+AGG | - | chr3.1:65806096-65806115 | MS.gene79856:intron | 35.0% |
| !! | AGGAGAGTACTTAATGATTC+AGG | - | chr3.1:65806982-65807001 | MS.gene79856:CDS | 35.0% |
| !! | CTCTTCTACTAGTCTACTTT+TGG | - | chr3.1:65808519-65808538 | MS.gene79856:CDS | 35.0% |
| AAACTTTGACGCGGAAATGA+AGG | + | chr3.1:65806543-65806562 | None:intergenic | 40.0% | |
| AACAATAGCAGTTGGAAGTG+AGG | - | chr3.1:65806438-65806457 | MS.gene79856:intron | 40.0% | |
| AACTTCAATCCAGCACCAAT+AGG | + | chr3.1:65808472-65808491 | None:intergenic | 40.0% | |
| AATTGACACGTGTCAGACAT+TGG | - | chr3.1:65808051-65808070 | MS.gene79856:intron | 40.0% | |
| AATTGGAGAATCTCCATCAG+TGG | - | chr3.1:65806360-65806379 | MS.gene79856:intron | 40.0% | |
| ACAAGAACACGAGCAACATT+TGG | + | chr3.1:65806478-65806497 | None:intergenic | 40.0% | |
| ACATAGTACAACGCTGAACA+TGG | + | chr3.1:65805646-65805665 | None:intergenic | 40.0% | |
| ACATCATTGGGGAAATAGCA+AGG | + | chr3.1:65807294-65807313 | None:intergenic | 40.0% | |
| AGGCTTAGGGATTAAATCCA+TGG | + | chr3.1:65806578-65806597 | None:intergenic | 40.0% | |
| ATGATGTAGGTGCATTTGTG+GGG | - | chr3.1:65806161-65806180 | MS.gene79856:intron | 40.0% | |
| ATTGACACGTGTCAGACATT+GGG | - | chr3.1:65808052-65808071 | MS.gene79856:intron | 40.0% | |
| CAACATTGACACGTTAACAC+CGG | - | chr3.1:65807961-65807980 | MS.gene79856:intron | 40.0% | |
| CAAGAACACGAGCAACATTT+GGG | + | chr3.1:65806477-65806496 | None:intergenic | 40.0% | |
| CAGTATGTTTGATGCTATGG+TGG | - | chr3.1:65806816-65806835 | MS.gene79856:CDS | 40.0% | |
| CATGGATCATGTGTATATGC+AGG | - | chr3.1:65808275-65808294 | MS.gene79856:intron | 40.0% | |
| CCCCAATGTCTTTCAGATAT+AGG | + | chr3.1:65807081-65807100 | None:intergenic | 40.0% | |
| CGTTAACTTACTTGGATCCT+CGG | + | chr3.1:65807412-65807431 | None:intergenic | 40.0% | |
| GAGTTAAAAGTGGCTGTAGA+AGG | + | chr3.1:65806607-65806626 | None:intergenic | 40.0% | |
| GATCATGTGTATATGCAGGA+AGG | - | chr3.1:65808279-65808298 | MS.gene79856:intron | 40.0% | |
| GTATGATGTAGGTGCATTTG+TGG | - | chr3.1:65806159-65806178 | MS.gene79856:intron | 40.0% | |
| TAATCGATGAAGCACGGATA+CGG | - | chr3.1:65805839-65805858 | MS.gene79856:intron | 40.0% | |
| TACAGCTATGATAACTACCG+AGG | - | chr3.1:65807392-65807411 | MS.gene79856:CDS | 40.0% | |
| TAGAAGGAGGAAAAGGCTTA+GGG | + | chr3.1:65806591-65806610 | None:intergenic | 40.0% | |
| TCATTGTCACAGAAACTGGT+TGG | - | chr3.1:65806887-65806906 | MS.gene79856:CDS | 40.0% | |
| TCTTCAAAAACTGGAGGACT+TGG | + | chr3.1:65806651-65806670 | None:intergenic | 40.0% | |
| TCTTTGTTGAAGGAAGGGAT+CGG | + | chr3.1:65806762-65806781 | None:intergenic | 40.0% | |
| TGAAAAGATGGAAGCTGGTT+TGG | - | chr3.1:65807215-65807234 | MS.gene79856:CDS | 40.0% | |
| TGAGCATAATCGATGAAGCA+CGG | - | chr3.1:65805833-65805852 | MS.gene79856:intron | 40.0% | |
| TTAAAAGTGGCTGTAGAAGG+AGG | + | chr3.1:65806604-65806623 | None:intergenic | 40.0% | |
| TTGAGATTGACAAAGGAGTG+TGG | + | chr3.1:65805577-65805596 | None:intergenic | 40.0% | |
| TTTGGACCTGTAAGTCCTAT+TGG | - | chr3.1:65808454-65808473 | MS.gene79856:intron | 40.0% | |
| ! | AGAAGCTACTTGTTGAGTGT+AGG | + | chr3.1:65807539-65807558 | None:intergenic | 40.0% |
| ! | ATCAGTTCTAACTTGAGCAC+GGG | - | chr3.1:65808403-65808422 | MS.gene79856:intron | 40.0% |
| ! | CATGGCTTTTCACATCATTG+GGG | + | chr3.1:65807305-65807324 | None:intergenic | 40.0% |
| ! | GCATGGCTTTTCACATCATT+GGG | + | chr3.1:65807306-65807325 | None:intergenic | 40.0% |
| ! | GCATTTTCTAAACTAGCGTC+CGG | + | chr3.1:65806937-65806956 | None:intergenic | 40.0% |
| !!! | CAGCCACTTTTAACTCATCA+TGG | - | chr3.1:65806611-65806630 | MS.gene79856:intron | 40.0% |
| AACTGTGCAGCTATTCAAGC+TGG | - | chr3.1:65807264-65807283 | MS.gene79856:CDS | 45.0% | |
| AAGAGTGAGCAATAACGCAC+TGG | + | chr3.1:65805522-65805541 | None:intergenic | 45.0% | |
| ACTGTGCAGCTATTCAAGCT+GGG | - | chr3.1:65807265-65807284 | MS.gene79856:CDS | 45.0% | |
| CGGATCATTGTCACAGAAAC+TGG | - | chr3.1:65806883-65806902 | MS.gene79856:CDS | 45.0% | |
| CTACAAGCCCTATCAAACAC+CGG | - | chr3.1:65806295-65806314 | MS.gene79856:intron | 45.0% | |
| CTGGAACACAACATTGACAC+CGG | - | chr3.1:65807887-65807906 | MS.gene79856:intron | 45.0% | |
| CTGTGAAGATGATTCATGGC+AGG | + | chr3.1:65806502-65806521 | None:intergenic | 45.0% | |
| GCATATGCTCCTATGAAGCA+CGG | + | chr3.1:65805985-65806004 | None:intergenic | 45.0% | |
| GCATTTGTGGGGGTAAACAT+TGG | - | chr3.1:65806172-65806191 | MS.gene79856:intron | 45.0% | |
| GGCACTGTGAAGATGATTCA+TGG | + | chr3.1:65806506-65806525 | None:intergenic | 45.0% | |
| GTAGAAGGAGGAAAAGGCTT+AGG | + | chr3.1:65806592-65806611 | None:intergenic | 45.0% | |
| TATGAAGCACGGACACTTCT+TGG | + | chr3.1:65805974-65805993 | None:intergenic | 45.0% | |
| TCGTTAGGTCCACCTAAATG+TGG | + | chr3.1:65806913-65806932 | None:intergenic | 45.0% | |
| TGATGTAGGTGCATTTGTGG+GGG | - | chr3.1:65806162-65806181 | MS.gene79856:intron | 45.0% | |
| TTCAACGCCGGTGTTTGATA+GGG | + | chr3.1:65806305-65806324 | None:intergenic | 45.0% | |
| TTCTCCTAGTCAACCGATGA+TGG | - | chr3.1:65807005-65807024 | MS.gene79856:CDS | 45.0% | |
| TTTAGGTGGACCTAACGAAC+CGG | - | chr3.1:65806915-65806934 | MS.gene79856:CDS | 45.0% | |
| ! | ACACCTTCGATCAGAAGTGT+CGG | - | chr3.1:65808076-65808095 | MS.gene79856:intron | 45.0% |
| ! | ATAGCCATCATCGGTTGACT+AGG | + | chr3.1:65807012-65807031 | None:intergenic | 45.0% |
| ! | GAAACTGGTTGGCCACATTT+AGG | - | chr3.1:65806898-65806917 | MS.gene79856:CDS | 45.0% |
| ! | GGCATGGCTTTTCACATCAT+TGG | + | chr3.1:65807307-65807326 | None:intergenic | 45.0% |
| ! | GGGATTAAATCCATGGACTG+AGG | + | chr3.1:65806571-65806590 | None:intergenic | 45.0% |
| ! | TTCTTGGATTAGACGTGTCC+TGG | + | chr3.1:65805958-65805977 | None:intergenic | 45.0% |
| !! | AACCTTATGTGTCGGTGTTG+TGG | - | chr3.1:65808016-65808035 | MS.gene79856:intron | 45.0% |
| !! | AAGAAGTGTCCGTGCTTCAT+AGG | - | chr3.1:65805973-65805992 | MS.gene79856:intron | 45.0% |
| !! | CACTTTTGGGTGCGAATTTC+TGG | + | chr3.1:65807818-65807837 | None:intergenic | 45.0% |
| ATCCATGATGCAGCCACTGA+TGG | + | chr3.1:65806376-65806395 | None:intergenic | 50.0% | |
| ATGAAGCACGGATACGGACA+CGG | - | chr3.1:65805845-65805864 | MS.gene79856:intron | 50.0% | |
| CACAACACATGTCCTACACC+AGG | - | chr3.1:65805937-65805956 | MS.gene79856:intron | 50.0% | |
| CCAGCACCAATAGGACTTAC+AGG | + | chr3.1:65808463-65808482 | None:intergenic | 50.0% | |
| CCTGTAAGTCCTATTGGTGC+TGG | - | chr3.1:65808460-65808479 | MS.gene79856:intron | 50.0% | |
| CTTCAACGCCGGTGTTTGAT+AGG | + | chr3.1:65806306-65806325 | None:intergenic | 50.0% | |
| GAATAGCTGCACAGTTTGCC+CGG | + | chr3.1:65807260-65807279 | None:intergenic | 50.0% | |
| GACGCTGAAAAGATGGAAGC+TGG | - | chr3.1:65807210-65807229 | MS.gene79856:CDS | 50.0% | |
| GATTAGACGTGTCCTGGTGT+AGG | + | chr3.1:65805952-65805971 | None:intergenic | 50.0% | |
| GTGGCTGTAGAAGGAGGAAA+AGG | + | chr3.1:65806598-65806617 | None:intergenic | 50.0% | |
| TTGTGTGGCTAAAGATGGCG+CGG | - | chr3.1:65807188-65807207 | MS.gene79856:CDS | 50.0% | |
| ! | AAACTAGCGTCCGGTTCGTT+AGG | + | chr3.1:65806928-65806947 | None:intergenic | 50.0% |
| ! | ACTGGTTGGCCACATTTAGG+TGG | - | chr3.1:65806901-65806920 | MS.gene79856:CDS | 50.0% |
| ! | AGTTCTAACTTGAGCACGGG+TGG | - | chr3.1:65808406-65808425 | MS.gene79856:intron | 50.0% |
| !! | AGATGGAAGCTGGTTTGGAC+TGG | - | chr3.1:65807220-65807239 | MS.gene79856:CDS | 50.0% |
| !! | AGCACTGACACAACACAGAC+TGG | - | chr3.1:65807868-65807887 | MS.gene79856:intron | 50.0% |
| !! | CTTATGTGTCGGTGTTGTGG+CGG | - | chr3.1:65808019-65808038 | MS.gene79856:intron | 50.0% |
| !! | GATGGAAGCTGGTTTGGACT+GGG | - | chr3.1:65807221-65807240 | MS.gene79856:CDS | 50.0% |
| AACTTGAGCACGGGTGGTGA+TGG | - | chr3.1:65808412-65808431 | MS.gene79856:intron | 55.0% | |
| ACTTGAGCACGGGTGGTGAT+GGG | - | chr3.1:65808413-65808432 | MS.gene79856:intron | 55.0% | |
| AGTTTCGACGCCTCAGTCCA+TGG | - | chr3.1:65806558-65806577 | MS.gene79856:intron | 55.0% | |
| CGCCACAACACCGACACATA+AGG | + | chr3.1:65808021-65808040 | None:intergenic | 55.0% | |
| CTCCATCAGTGGCTGCATCA+TGG | - | chr3.1:65806371-65806390 | MS.gene79856:intron | 55.0% | |
| GCCAACAAGGACTTCAACGC+CGG | + | chr3.1:65806317-65806336 | None:intergenic | 55.0% | |
| ! | ACCGGCGTTGAAGTCCTTGT+TGG | - | chr3.1:65806313-65806332 | MS.gene79856:intron | 55.0% |
| ! | GCACCGACACTTCTGATCGA+AGG | + | chr3.1:65808082-65808101 | None:intergenic | 55.0% |
| !! | GAGGCGTCGAAACTTTGACG+CGG | + | chr3.1:65806552-65806571 | None:intergenic | 55.0% |
| CTTCGTCGGTGACGCCAACA+AGG | + | chr3.1:65806330-65806349 | None:intergenic | 60.0% | |
| TGGCGCGGACGCTGAAAAGA+TGG | - | chr3.1:65807203-65807222 | MS.gene79856:CDS | 60.0% | |
| ! | TTGGACTGGGCTTGCGGAGA+AGG | - | chr3.1:65807234-65807253 | MS.gene79856:CDS | 60.0% |
| !! | GCTGGTTTGGACTGGGCTTG+CGG | - | chr3.1:65807228-65807247 | MS.gene79856:CDS | 60.0% |
| ACTGGGCTTGCGGAGAAGGC+CGG | - | chr3.1:65807238-65807257 | MS.gene79856:CDS | 65.0% | |
| CTGGGCTTGCGGAGAAGGCC+GGG | - | chr3.1:65807239-65807258 | MS.gene79856:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.1 | gene | 65805497 | 65808555 | 65805497 | ID=MS.gene79856 |
| chr3.1 | mRNA | 65805497 | 65808555 | 65805497 | ID=MS.gene79856.t1;Parent=MS.gene79856 |
| chr3.1 | exon | 65808489 | 65808555 | 65808489 | ID=MS.gene79856.t1.exon1;Parent=MS.gene79856.t1 |
| chr3.1 | CDS | 65808489 | 65808555 | 65808489 | ID=cds.MS.gene79856.t1;Parent=MS.gene79856.t1 |
| chr3.1 | exon | 65806632 | 65807882 | 65806632 | ID=MS.gene79856.t1.exon2;Parent=MS.gene79856.t1 |
| chr3.1 | CDS | 65806632 | 65807882 | 65806632 | ID=cds.MS.gene79856.t1;Parent=MS.gene79856.t1 |
| chr3.1 | exon | 65805752 | 65805779 | 65805752 | ID=MS.gene79856.t1.exon3;Parent=MS.gene79856.t1 |
| chr3.1 | CDS | 65805752 | 65805779 | 65805752 | ID=cds.MS.gene79856.t1;Parent=MS.gene79856.t1 |
| chr3.1 | exon | 65805497 | 65805644 | 65805497 | ID=MS.gene79856.t1.exon4;Parent=MS.gene79856.t1 |
| chr3.1 | CDS | 65805497 | 65805644 | 65805497 | ID=cds.MS.gene79856.t1;Parent=MS.gene79856.t1 |
| Gene Sequence |
| Protein sequence |
