AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene049885

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene049885.t1 MTR_8g085720 98.594 498 7 0 1 498 1 498 0.0 1006
MS.gene049885.t1 MTR_3g083580 70.259 501 142 3 1 497 1 498 0.0 746
MS.gene049885.t1 MTR_1g031900 54.054 444 203 1 24 467 22 464 2.68e-178 510
MS.gene049885.t1 MTR_1g031900 54.567 427 193 1 24 450 22 447 5.14e-174 499
MS.gene049885.t1 MTR_5g078200 53.604 444 205 1 10 453 7 449 8.38e-171 496
MS.gene049885.t1 MTR_3g065460 49.592 490 239 3 10 498 8 490 9.23e-170 488
MS.gene049885.t1 MTR_4g132280 53.147 429 200 1 23 451 42 469 1.05e-165 479
MS.gene049885.t1 MTR_5g078200 54.676 417 188 1 37 453 1 416 1.99e-162 474
MS.gene049885.t1 MTR_6g088885 39.111 450 260 5 7 448 11 454 9.46e-117 353
MS.gene049885.t1 MTR_5g085580 38.876 445 247 4 26 448 25 466 1.70e-107 328
MS.gene049885.t1 MTR_1g056640 37.500 456 249 5 26 448 38 490 3.68e-107 328
MS.gene049885.t1 MTR_8g102340 37.587 431 223 5 23 446 25 416 3.85e-99 307
MS.gene049885.t1 MTR_4g069940 35.153 458 283 3 6 452 9 463 1.01e-95 298
MS.gene049885.t1 MTR_3g116510 36.080 449 275 4 12 452 14 458 2.24e-93 291
MS.gene049885.t1 MTR_7g053500 34.713 435 268 6 27 448 27 458 2.83e-93 291
MS.gene049885.t1 MTR_4g088155 34.416 462 279 8 3 448 4 457 1.09e-90 285
MS.gene049885.t1 MTR_8g012400 34.954 432 268 7 27 448 30 458 2.47e-87 276
MS.gene049885.t1 MTR_1g022160 34.934 458 262 5 25 450 23 476 5.18e-86 273
MS.gene049885.t1 MTR_1g022160 34.423 459 265 5 25 451 23 477 9.87e-84 267
MS.gene049885.t1 MTR_4g083500 36.304 460 254 13 26 456 44 493 1.35e-83 268
MS.gene049885.t1 MTR_7g053500 35.958 381 228 6 81 448 4 381 5.75e-83 262
MS.gene049885.t1 MTR_1g022160 34.298 449 259 5 25 441 23 467 7.09e-81 259
MS.gene049885.t1 MTR_7g026340 34.615 442 252 11 26 447 23 447 7.86e-78 251
MS.gene049885.t1 MTR_3g080410 39.264 326 194 2 23 347 23 345 1.61e-77 247
MS.gene049885.t1 MTR_4g084480 35.714 378 233 6 1 377 1 369 1.69e-76 245
MS.gene049885.t1 MTR_4g084480 36.264 364 223 5 1 363 8 363 8.07e-76 244
MS.gene049885.t1 MTR_4g084480 36.264 364 223 5 1 363 8 363 8.94e-76 244
MS.gene049885.t1 MTR_1g077990 39.319 323 190 4 26 347 31 348 1.45e-75 243
MS.gene049885.t1 MTR_4g052970 37.425 334 204 3 23 355 26 355 4.02e-75 242
MS.gene049885.t1 MTR_8g012400 35.185 378 232 7 81 448 4 378 8.69e-75 241
MS.gene049885.t1 MTR_2g086530 35.714 364 223 5 10 371 12 366 3.40e-72 234
MS.gene049885.t1 MTR_2g019345 38.720 328 193 5 18 343 16 337 4.97e-72 234
MS.gene049885.t1 MTR_2g086530 36.286 350 213 4 23 371 5 345 1.11e-71 232
MS.gene049885.t1 MTR_4g010200 37.101 345 208 4 11 349 13 354 4.14e-71 231
MS.gene049885.t1 MTR_4g114850 35.127 353 222 3 20 368 17 366 4.33e-70 228
MS.gene049885.t1 MTR_4g114850 36.228 334 206 3 20 349 17 347 1.08e-69 227
MS.gene049885.t1 MTR_1g007810 38.318 321 187 6 26 343 16 328 1.09e-69 227
MS.gene049885.t1 MTR_4g114850 36.228 334 206 3 20 349 17 347 1.84e-69 227
MS.gene049885.t1 MTR_3g116510 37.195 328 195 3 132 452 1 324 3.79e-67 219
MS.gene049885.t1 MTR_1g022160 36.137 321 200 3 25 343 23 340 4.75e-65 216
MS.gene049885.t1 MTR_1g010120 30.901 466 281 16 2 448 5 448 2.35e-62 211
MS.gene049885.t1 MTR_1g053320 31.947 457 277 13 11 448 15 456 2.40e-62 211
MS.gene049885.t1 MTR_3g108600 31.567 453 262 15 10 448 17 435 9.04e-62 209
MS.gene049885.t1 MTR_2g027560 32.265 437 268 15 26 448 28 450 2.01e-59 203
MS.gene049885.t1 MTR_7g081350 33.628 339 209 8 11 345 9 335 5.47e-59 198
MS.gene049885.t1 MTR_3g031770 31.603 443 271 13 20 448 21 445 3.22e-56 195
MS.gene049885.t1 MTR_4g124440 30.197 457 290 16 6 448 10 451 4.72e-54 189
MS.gene049885.t1 MTR_4g112025 29.067 461 299 15 4 448 8 456 5.50e-54 190
MS.gene049885.t1 MTR_2g034470 34.524 336 204 7 24 357 28 349 3.59e-53 183
MS.gene049885.t1 MTR_8g092070 29.844 449 286 16 26 459 34 468 4.25e-53 189
MS.gene049885.t1 MTR_4g076255 34.783 322 194 7 26 347 25 330 8.23e-53 182
MS.gene049885.t1 MTR_2g034470 34.462 325 197 7 35 357 4 314 2.95e-52 180
MS.gene049885.t1 MTR_2g034440 34.421 337 204 8 14 347 13 335 3.84e-52 180
MS.gene049885.t1 MTR_2g034480 33.708 356 221 9 10 361 11 355 9.14e-52 180
MS.gene049885.t1 MTR_4g076570 30.000 340 223 4 26 365 22 346 1.08e-50 177
MS.gene049885.t1 MTR_7g081370 32.551 341 202 9 6 345 10 323 1.51e-50 176
MS.gene049885.t1 MTR_4g076490 31.173 324 208 5 26 349 97 405 1.11e-49 176
MS.gene049885.t1 MTR_4g076470 31.515 330 210 6 18 347 15 328 2.13e-49 172
MS.gene049885.t1 MTR_1g052430 30.514 331 221 4 16 346 22 343 7.84e-49 173
MS.gene049885.t1 MTR_4g076430 32.198 323 201 8 26 347 23 328 8.95e-49 171
MS.gene049885.t1 MTR_7g085390 29.449 472 282 20 4 448 3 450 1.87e-48 174
MS.gene049885.t1 MTR_4g076440 31.056 322 206 6 26 347 23 328 3.22e-48 169
MS.gene049885.t1 MTR_4g076500 29.721 323 215 3 26 347 78 389 3.54e-47 168
MS.gene049885.t1 MTR_6g032820 28.761 452 282 18 4 432 3 437 3.17e-45 164
MS.gene049885.t1 MTR_3g095050 29.039 458 290 20 10 448 14 455 5.95e-44 162
MS.gene049885.t1 MTR_5g081720 35.932 295 179 7 51 343 62 348 5.43e-43 157
MS.gene049885.t1 MTR_4g134280 31.322 348 212 15 114 448 3 336 1.75e-40 150
MS.gene049885.t1 MTR_5g097420 51.163 86 42 0 363 448 29 114 6.78e-27 105
MS.gene049885.t1 MTR_8g085390 47.321 112 56 3 354 464 21 130 7.16e-26 104
MS.gene049885.t1 MTR_4g133730 46.939 98 49 1 354 448 15 112 9.76e-25 99.4
MS.gene049885.t1 MTR_8g089400 48.485 99 50 1 364 462 37 134 3.74e-24 99.0
MS.gene049885.t1 MTR_4g079530 38.125 160 86 5 344 498 21 172 4.45e-24 99.4
MS.gene049885.t1 MTR_8g089400 46.789 109 53 2 358 462 47 154 7.38e-24 99.0
MS.gene049885.t1 MTR_4g079530 44.762 105 54 1 344 448 21 121 2.68e-23 95.5
MS.gene049885.t1 MTR_4g133735 49.412 85 43 0 364 448 28 112 1.03e-22 93.6
MS.gene049885.t1 MTR_5g015720 48.889 90 45 1 363 451 328 417 3.17e-22 99.4
MS.gene049885.t1 MTR_2g049670 52.273 88 40 2 364 451 158 243 7.21e-21 94.0
MS.gene049885.t1 MTR_5g091650 36.517 178 83 6 336 497 91 254 5.82e-20 90.1
MS.gene049885.t1 MTR_8g085400 50.633 79 35 2 364 442 33 107 6.24e-20 85.9
MS.gene049885.t1 MTR_7g111600 48.235 85 43 1 364 448 160 243 6.77e-20 89.7
MS.gene049885.t1 MTR_4g083070 43.878 98 53 2 357 453 14 110 8.50e-20 87.8
MS.gene049885.t1 MTR_7g111600 48.235 85 43 1 364 448 160 243 9.29e-20 90.1
MS.gene049885.t1 MTR_7g111600 48.235 85 43 1 364 448 160 243 2.07e-19 89.4
MS.gene049885.t1 MTR_8g085440 45.882 85 45 1 364 448 32 115 2.25e-19 84.0
MS.gene049885.t1 MTR_5g091650 42.609 115 50 3 336 448 91 191 5.53e-19 85.5
MS.gene049885.t1 MTR_2g449880 82.000 50 7 1 392 439 227 276 1.27e-18 87.4
MS.gene049885.t1 MTR_3g048280 42.453 106 57 2 340 445 91 192 9.30e-18 82.4
MS.gene049885.t1 MTR_1g116870 43.023 86 48 1 363 448 275 359 1.04e-17 85.1
MS.gene049885.t1 MTR_1g084820 49.383 81 39 2 364 444 420 498 1.49e-17 86.3
MS.gene049885.t1 MTR_1g084820 49.383 81 39 2 364 444 420 498 1.53e-17 85.9
MS.gene049885.t1 MTR_4g109490 47.191 89 45 2 360 448 20 106 1.83e-17 81.6
MS.gene049885.t1 MTR_8g088120 48.684 76 38 1 376 451 60 134 6.04e-17 80.5
MS.gene049885.t1 MTR_3g082080 44.186 86 47 1 362 447 155 239 8.41e-16 77.4
MS.gene049885.t1 MTR_8g085420 41.667 84 48 1 364 447 32 114 1.54e-15 73.9
MS.gene049885.t1 MTR_5g044530 41.837 98 53 3 357 451 14 110 3.30e-15 75.9
MS.gene049885.t1 MTR_2g072500 36.667 90 55 1 359 448 3 90 4.41e-11 59.7
MS.gene049885.t1 MTR_4g036775 34.951 103 56 3 259 361 94 185 6.25e-11 62.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene049885.t1 AT3G13560 67.360 481 152 3 1 479 1 478 0.0 669
MS.gene049885.t1 AT3G13560 67.360 481 152 3 1 479 1 478 0.0 669
MS.gene049885.t1 AT3G13560 67.360 481 152 3 1 479 1 478 0.0 669
MS.gene049885.t1 AT3G13560 67.360 481 152 3 1 479 1 478 0.0 669
MS.gene049885.t1 AT3G13560 67.360 481 152 3 1 479 1 478 0.0 669
MS.gene049885.t1 AT1G66250 51.732 433 207 2 23 455 29 459 6.16e-164 474
MS.gene049885.t1 AT2G01630 51.282 429 208 1 24 452 21 448 3.35e-163 472
MS.gene049885.t1 AT1G11820 52.204 431 205 1 25 455 43 472 8.52e-163 471
MS.gene049885.t1 AT2G01630 51.313 419 203 1 24 442 21 438 2.68e-160 462
MS.gene049885.t1 AT1G11820 52.153 418 199 1 25 442 43 459 2.06e-157 456
MS.gene049885.t1 AT2G01630 51.622 370 178 1 24 393 21 389 3.24e-137 401
MS.gene049885.t1 AT1G11820 51.786 336 155 1 25 360 43 371 2.61e-118 353
MS.gene049885.t1 AT2G05790 39.597 447 243 5 26 448 25 468 1.05e-115 349
MS.gene049885.t1 AT5G56590 38.763 485 282 6 23 498 23 501 4.51e-112 341
MS.gene049885.t1 AT5G55180 38.710 434 253 3 25 448 26 456 1.39e-108 331
MS.gene049885.t1 AT4G26830 38.636 440 252 6 20 448 23 455 6.98e-107 326
MS.gene049885.t1 AT4G26830 37.665 454 265 6 6 448 5 451 8.54e-107 326
MS.gene049885.t1 AT4G29360 37.447 470 262 3 16 456 17 483 1.67e-105 325
MS.gene049885.t1 AT4G29360 37.131 474 266 3 12 456 23 493 2.25e-105 325
MS.gene049885.t1 AT5G55180 38.551 428 250 3 25 442 26 450 1.68e-104 320
MS.gene049885.t1 AT5G24318 38.496 452 253 9 9 448 17 455 8.00e-103 316
MS.gene049885.t1 AT5G24318 38.341 446 250 9 9 442 17 449 3.96e-99 306
MS.gene049885.t1 AT4G34480 37.939 456 266 5 1 448 1 447 8.52e-99 307
MS.gene049885.t1 AT2G16230 38.283 431 256 4 24 448 23 449 1.44e-96 301
MS.gene049885.t1 AT3G07320 34.562 434 268 8 27 448 26 455 6.28e-86 272
MS.gene049885.t1 AT3G55430 35.945 434 254 13 26 448 29 449 3.81e-84 267
MS.gene049885.t1 AT4G14080 32.653 441 278 8 22 448 38 473 2.10e-81 261
MS.gene049885.t1 AT3G23770 33.408 446 271 7 22 448 33 471 2.57e-80 258
MS.gene049885.t1 AT5G24318 39.506 324 178 5 135 448 1 316 3.25e-78 248
MS.gene049885.t1 AT2G27500 37.135 342 211 2 23 363 26 364 4.16e-76 244
MS.gene049885.t1 AT2G27500 37.135 342 211 2 23 363 26 364 6.47e-76 244
MS.gene049885.t1 AT1G32860 38.037 326 195 4 26 348 29 350 1.19e-75 244
MS.gene049885.t1 AT4G34480 40.233 343 188 5 114 448 3 336 5.33e-75 242
MS.gene049885.t1 AT1G30080 38.871 319 190 3 26 343 36 350 9.52e-73 236
MS.gene049885.t1 AT1G30080 38.871 319 190 3 26 343 36 350 9.76e-73 236
MS.gene049885.t1 AT4G18340 36.873 339 206 4 26 363 34 365 4.94e-72 234
MS.gene049885.t1 AT4G18340 36.873 339 206 4 26 363 34 365 1.02e-71 233
MS.gene049885.t1 AT5G24318 38.166 338 194 7 9 343 17 342 1.33e-70 229
MS.gene049885.t1 AT2G39640 33.630 449 280 10 3 446 5 440 1.40e-69 232
MS.gene049885.t1 AT2G39640 34.940 83 53 1 364 446 460 541 4.37e-11 65.9
MS.gene049885.t1 AT4G34480 36.080 352 221 2 1 351 1 349 2.53e-68 223
MS.gene049885.t1 AT3G15800 35.588 340 213 4 12 349 30 365 9.10e-68 223
MS.gene049885.t1 AT5G42100 36.111 324 199 5 26 345 27 346 2.31e-67 223
MS.gene049885.t1 AT5G42100 36.111 324 199 5 26 345 27 346 5.01e-67 222
MS.gene049885.t1 AT2G26600 35.562 329 205 3 23 347 28 353 5.44e-67 221
MS.gene049885.t1 AT4G16260 36.070 341 207 5 10 350 8 337 3.52e-63 209
MS.gene049885.t1 AT2G27500 37.370 289 177 2 76 363 1 286 1.75e-62 206
MS.gene049885.t1 AT5G42720 36.202 337 209 4 10 343 9 342 8.01e-62 209
MS.gene049885.t1 AT3G61810 34.356 326 203 5 26 348 55 372 2.00e-61 206
MS.gene049885.t1 AT4G16260 36.076 316 191 5 35 350 4 308 9.52e-60 199
MS.gene049885.t1 AT3G57270 34.848 330 204 6 19 347 20 339 3.21e-57 194
MS.gene049885.t1 AT5G58090 31.579 437 272 14 26 448 22 445 7.35e-57 196
MS.gene049885.t1 AT4G31140 29.736 454 286 14 10 448 13 448 5.03e-55 192
MS.gene049885.t1 AT4G17180 31.111 450 275 14 13 448 12 440 7.75e-55 191
MS.gene049885.t1 AT5G58480 31.180 449 271 15 18 449 18 445 6.34e-54 189
MS.gene049885.t1 AT3G24330 28.986 483 294 18 11 469 24 481 4.40e-52 184
MS.gene049885.t1 AT5G64790 28.634 454 296 15 9 448 12 451 1.06e-51 183
MS.gene049885.t1 AT2G26600 35.686 255 160 2 94 347 8 259 1.99e-51 177
MS.gene049885.t1 AT5G20870 31.448 442 272 16 26 448 30 459 1.96e-50 180
MS.gene049885.t1 AT3G46570 35.799 338 203 10 11 343 12 340 9.33e-50 174
MS.gene049885.t1 AT3G57260 33.333 336 208 7 12 347 19 338 1.06e-49 174
MS.gene049885.t1 AT3G57260 33.333 336 208 7 12 347 35 354 1.77e-49 174
MS.gene049885.t1 AT3G55780 34.667 300 187 7 52 348 61 354 3.01e-49 174
MS.gene049885.t1 AT2G19440 30.822 438 274 16 26 448 21 444 5.25e-48 172
MS.gene049885.t1 AT2G19440 30.822 438 274 16 26 448 21 444 5.25e-48 172
MS.gene049885.t1 AT5G20340 33.974 312 190 8 26 334 43 341 1.16e-47 169
MS.gene049885.t1 AT5G18220 28.913 460 291 18 9 448 12 455 5.18e-47 170
MS.gene049885.t1 AT5G20330 33.441 311 193 7 26 334 34 332 5.59e-47 166
MS.gene049885.t1 AT3G57240 33.230 322 199 7 26 347 35 340 6.77e-47 166
MS.gene049885.t1 AT1G33220 32.667 300 189 6 26 323 34 322 7.04e-47 166
MS.gene049885.t1 AT1G64760 29.978 457 286 17 11 448 7 448 8.65e-47 169
MS.gene049885.t1 AT1G64760 29.978 457 286 17 11 448 7 448 8.65e-47 169
MS.gene049885.t1 AT3G04010 29.797 443 273 19 26 448 33 457 5.44e-46 167
MS.gene049885.t1 AT1G77780 30.409 342 225 8 6 345 2 332 1.42e-44 160
MS.gene049885.t1 AT5G20390 31.613 310 200 6 26 334 33 331 4.03e-43 156
MS.gene049885.t1 AT1G77790 29.023 348 233 8 2 345 4 341 1.21e-41 152
MS.gene049885.t1 AT5G20560 30.435 322 207 6 10 323 11 323 7.62e-39 144
MS.gene049885.t1 AT5G67460 26.214 412 204 11 66 448 37 377 5.16e-31 124
MS.gene049885.t1 AT5G67460 25.616 406 202 11 66 442 37 371 4.18e-27 112
MS.gene049885.t1 AT5G35740 50.000 86 42 1 364 448 30 115 4.08e-26 103
MS.gene049885.t1 AT1G29380 53.333 90 41 1 364 453 148 236 1.86e-24 102
MS.gene049885.t1 AT1G18650 48.958 96 48 1 357 452 14 108 6.19e-24 97.4
MS.gene049885.t1 AT3G58100 44.231 104 58 0 351 454 28 131 7.37e-24 99.0
MS.gene049885.t1 AT1G18650 48.958 96 48 1 357 452 14 108 8.00e-24 99.0
MS.gene049885.t1 AT3G58100 44.231 104 58 0 351 454 104 207 1.12e-23 100
MS.gene049885.t1 AT2G30933 50.562 89 43 1 364 452 82 169 1.53e-23 99.4
MS.gene049885.t1 AT1G29380 52.941 85 39 1 364 448 148 231 2.85e-23 100
MS.gene049885.t1 AT2G04910 48.276 87 45 0 362 448 13 99 3.94e-22 91.7
MS.gene049885.t1 AT4G13600 44.660 103 56 1 363 465 60 161 1.36e-21 94.0
MS.gene049885.t1 AT1G66870 41.111 90 53 0 360 449 22 111 3.66e-20 86.3
MS.gene049885.t1 AT1G29380 51.899 79 37 1 364 442 148 225 3.78e-20 89.7
MS.gene049885.t1 AT1G29380 51.899 79 37 1 364 442 148 225 3.78e-20 89.7
MS.gene049885.t1 AT1G66870 41.111 90 53 0 360 449 49 138 6.77e-20 86.3
MS.gene049885.t1 AT2G30933 50.633 79 38 1 364 442 82 159 7.15e-20 87.0
MS.gene049885.t1 AT2G30933 50.633 79 38 1 364 442 82 159 7.15e-20 87.0
MS.gene049885.t1 AT1G66855 41.860 86 50 0 364 449 26 111 7.57e-20 85.5
MS.gene049885.t1 AT4G05430 41.818 110 62 1 342 451 3 110 8.03e-20 86.3
MS.gene049885.t1 AT4G05430 41.818 110 62 1 342 451 28 135 8.04e-20 87.0
MS.gene049885.t1 AT2G04910 48.148 81 42 0 362 442 13 93 9.60e-20 85.5
MS.gene049885.t1 AT5G61130 46.154 91 48 1 358 448 15 104 2.22e-19 86.7
MS.gene049885.t1 AT1G66852 41.111 90 52 1 360 449 22 110 3.47e-18 80.5
MS.gene049885.t1 AT1G09460 50.000 90 41 3 364 452 137 223 8.72e-18 84.7
MS.gene049885.t1 AT2G43670 40.426 94 54 1 353 446 24 115 1.68e-17 79.0
MS.gene049885.t1 AT4G05430 41.584 101 57 1 342 442 28 126 2.46e-17 78.6
MS.gene049885.t1 AT1G79480 39.326 89 53 1 360 448 307 394 3.54e-17 84.0
MS.gene049885.t1 AT1G79480 39.326 89 53 1 360 448 306 393 4.10e-17 83.6
MS.gene049885.t1 AT4G16165 38.889 90 55 0 360 449 22 111 6.79e-17 77.0
MS.gene049885.t1 AT4G09462 38.202 89 54 1 360 448 25 112 1.39e-16 76.3
MS.gene049885.t1 AT4G09465 37.079 89 55 1 360 448 27 114 3.76e-16 75.1
MS.gene049885.t1 AT4G09467 37.079 89 55 1 360 448 27 114 4.84e-16 74.7
MS.gene049885.t1 AT4G09464 37.079 89 55 1 360 448 27 114 4.84e-16 74.7
MS.gene049885.t1 AT5G63240 36.082 97 60 1 354 448 30 126 8.00e-16 74.3
MS.gene049885.t1 AT2G42930 39.796 98 52 3 350 442 21 116 1.51e-15 73.9
MS.gene049885.t1 AT1G26450 49.351 77 37 2 360 436 17 91 2.43e-15 75.1
MS.gene049885.t1 AT4G09466 34.831 89 57 1 360 448 27 114 1.72e-14 70.5
MS.gene049885.t1 AT4G09090 37.647 85 52 1 364 448 31 114 1.97e-14 70.1
MS.gene049885.t1 AT1G69295 43.023 86 47 2 360 445 17 100 2.03e-14 73.2
MS.gene049885.t1 AT1G69295 43.902 82 44 2 364 445 17 96 4.93e-14 71.6
MS.gene049885.t1 AT5G53600 38.824 85 50 1 364 448 29 111 8.03e-14 68.2
MS.gene049885.t1 AT5G63250 39.326 89 52 2 362 448 40 128 8.91e-14 68.9
MS.gene049885.t1 AT2G03505 37.349 83 51 1 360 442 17 98 1.47e-13 69.3
MS.gene049885.t1 AT2G03505 37.349 83 51 1 360 442 17 98 1.47e-13 69.3
MS.gene049885.t1 AT2G03505 37.349 83 51 1 360 442 17 98 1.47e-13 69.3
MS.gene049885.t1 AT2G03505 37.349 83 51 1 360 442 17 98 1.93e-13 67.4
MS.gene049885.t1 AT5G08000 40.217 92 54 1 357 448 14 104 1.97e-13 69.3
MS.gene049885.t1 AT1G13830 41.250 80 46 1 363 442 20 98 3.59e-13 68.9
MS.gene049885.t1 AT1G13830 41.250 80 46 1 363 442 34 112 4.99e-13 68.6
MS.gene049885.t1 AT5G08000 42.353 85 48 1 364 448 40 123 5.02e-13 68.6
MS.gene049885.t1 AT5G63225 40.000 85 50 1 364 448 25 108 9.52e-13 65.1
MS.gene049885.t1 AT1G78520 38.636 88 52 1 361 448 29 114 2.97e-12 63.9
MS.gene049885.t1 AT5G53610 35.294 85 53 1 364 448 28 110 4.26e-12 63.2
MS.gene049885.t1 AT2G29735 36.782 87 52 2 364 448 31 116 9.45e-12 62.4

Find 132 sgRNAs with CRISPR-Local

Find 335 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGGTATATCTTTGAAATTTA+AGG 0.128389 4.4:-14275873 None:intergenic
TTCATATATGTAGGTATTAA+TGG 0.198679 4.4:-14276038 None:intergenic
TTAAATGCCTATCCTTATTA+TGG 0.208468 4.4:+14275701 MS.gene049885:CDS
TTAAGTTATGGTGGTGCTTC+TGG 0.217916 4.4:+14276145 MS.gene049885:CDS
ACCAACCATTACGTCAATAT+TGG 0.271858 4.4:-14275324 None:intergenic
CAGTATATGATTTCTGCTAT+TGG 0.274791 4.4:+14278683 MS.gene049885:CDS
TAGGTATTAATGGGTATATT+TGG 0.286007 4.4:-14276028 None:intergenic
TAAGGCATCTATAGAGTAAT+AGG 0.295793 4.4:-14275855 None:intergenic
CCCGTTGTTGTCACAGAAAC+TGG 0.299754 4.4:+14275893 MS.gene049885:CDS
CTGAATCATATTATTATTGT+AGG 0.312292 4.4:-14275972 None:intergenic
TCCCGTGGAGTTTCCACTTC+CGG 0.312354 4.4:-14276176 None:intergenic
GAAGCACCACCATAACTTAA+AGG 0.321021 4.4:-14276142 None:intergenic
GAAACTGGTTGGCCATCTTT+TGG 0.335542 4.4:+14275908 MS.gene049885:CDS
GGACCTTCTTCAAGTCCCTT+TGG 0.340012 4.4:+14278629 MS.gene049885:CDS
TGGATCCTTGGAAGTGATTT+CGG 0.342590 4.4:-14276413 None:intergenic
CAGCGGGTCCTGAATGATTC+TGG 0.363020 4.4:+14275992 MS.gene049885:CDS
ACAAGAACGGGAGCAACATT+TGG 0.363852 4.4:-14275485 None:intergenic
CCTTTAGTGTATCCATAATA+AGG 0.366387 4.4:-14275713 None:intergenic
GGTTTCGACTCCCCAATCTA+TGG 0.374341 4.4:+14275568 MS.gene049885:CDS
AGCTTTGTGAAGAGAATTCA+TGG 0.374738 4.4:-14275513 None:intergenic
GAGTTAAAGGTGGCAGTAGA+AGG 0.377503 4.4:-14275614 None:intergenic
CTGAGCTGGGCTTGTGGACA+AGG 0.378638 4.4:+14276250 MS.gene049885:CDS
AGAGTTCCACGAAGAGTTAA+AGG 0.382575 4.4:-14275627 None:intergenic
ACTGAAGGGTAGACACTTGC+AGG 0.384182 4.4:-14278664 None:intergenic
AACAGCTATTGCCGTGATAT+TGG 0.384637 4.4:-14275438 None:intergenic
TTATAGTGATATAGTGTGTT+TGG 0.385130 4.4:-14275803 None:intergenic
CATCGCTGTCCTTGTTGAAT+AGG 0.390124 4.4:-14276289 None:intergenic
TTGAAAGGGCTTGTAGTAAG+TGG 0.393044 4.4:-14275298 None:intergenic
AGTTTCCACTTCCGGTGATC+TGG 0.399812 4.4:-14276168 None:intergenic
GTAGAAGGCGGAAAAGGCTT+AGG 0.402688 4.4:-14275599 None:intergenic
AGCTGCAAAATGGCCTGAGC+TGG 0.403334 4.4:+14276236 MS.gene049885:CDS
TAGGGATAATATCCATAGAT+TGG 0.403343 4.4:-14275580 None:intergenic
GACACTGATAAGCTGCAAAA+TGG 0.405638 4.4:+14276226 MS.gene049885:CDS
AGGGATAATATCCATAGATT+GGG 0.411369 4.4:-14275579 None:intergenic
GGTGGAACTTGTGACTTTGA+TGG 0.412035 4.4:+14276385 MS.gene049885:CDS
ACCATAACTTAAAGGATAAA+CGG 0.415025 4.4:-14276134 None:intergenic
GCCGTTTATCCTTTAAGTTA+TGG 0.417378 4.4:+14276133 MS.gene049885:CDS
TGGGGCATCGTCTATACTAA+TGG 0.418933 4.4:+14276106 MS.gene049885:CDS
CTGCCACCTTTAACTCTTCG+TGG 0.424162 4.4:+14275621 MS.gene049885:CDS
CCAGTTTCTGTGACAACAAC+GGG 0.424807 4.4:-14275893 None:intergenic
AAACCTTGACACGAAAGTTA+AGG 0.425145 4.4:-14275550 None:intergenic
TAGGTGGACCAGAATCATTC+AGG 0.435500 4.4:-14276000 None:intergenic
CAAGAACGGGAGCAACATTT+GGG 0.436796 4.4:-14275484 None:intergenic
TCATATATGTAGGTATTAAT+GGG 0.439079 4.4:-14276037 None:intergenic
TATCAACTTACTTGGATCCT+TGG 0.449244 4.4:-14276425 None:intergenic
TTCATGGCAGGAACAAGAAC+GGG 0.460188 4.4:-14275497 None:intergenic
GAATTCTCTTCACAAAGCTC+TGG 0.463462 4.4:+14275517 MS.gene049885:CDS
CAGGTTCACACTTGCTCCAA+AGG 0.466151 4.4:-14278645 None:intergenic
TTTGATATCAGCTCTGGCGC+TGG 0.466581 4.4:+14278578 MS.gene049885:intron
CTCCATCAGCAGCCGCAGCT+TGG 0.474865 4.4:+14275381 MS.gene049885:CDS
CTTGTCCACAAGCCCAGCTC+AGG 0.477904 4.4:-14276249 None:intergenic
TCTGGCCAGATCACCGGAAG+TGG 0.480098 4.4:+14276163 MS.gene049885:CDS
TCATTTGCTCCACCAAAAGA+TGG 0.486688 4.4:-14275920 None:intergenic
ATAATCATTATAAGCATATG+AGG 0.487558 4.4:-14276341 None:intergenic
AGTTTACCTCCTACGGCACT+TGG 0.492220 4.4:+14278608 MS.gene049885:CDS
ATCCAAGCTGCGGCTGCTGA+TGG 0.494334 4.4:-14275383 None:intergenic
GGGAGCAACATTTGGGATTG+TGG 0.495905 4.4:-14275477 None:intergenic
ACGCACGTGAGTAATTTGAT+TGG 0.498392 4.4:-14275258 None:intergenic
ATTAAACAGTTCATATATGT+AGG 0.500028 4.4:-14276047 None:intergenic
ATGGGTATATTTGGCTGACT+AGG 0.505959 4.4:-14276019 None:intergenic
CCTTATTATGGATACACTAA+AGG 0.512667 4.4:+14275713 MS.gene049885:CDS
GATATTGGTGGACGGTACAT+AGG 0.513250 4.4:-14275423 None:intergenic
GTGGCAGTAGAAGGCGGAAA+AGG 0.514853 4.4:-14275605 None:intergenic
TGCTATGCTAACCTCTACAT+TGG 0.515362 4.4:+14274330 MS.gene049885:CDS
AATGAGGAGGTATTGAGAAT+CGG 0.517839 4.4:+14275353 MS.gene049885:CDS
CAATTTGTTTCACTGAAGGA+AGG 0.518534 4.4:-14275775 None:intergenic
GATTCTCAATACCTCCTCAT+TGG 0.520960 4.4:-14275351 None:intergenic
AATGGCCTGAGCTGGGCTTG+TGG 0.523927 4.4:+14276244 MS.gene049885:CDS
GCTATGCTAACCTCTACATT+GGG 0.528310 4.4:+14274331 MS.gene049885:CDS
TGAAAGGGCTTGTAGTAAGT+GGG 0.529032 4.4:-14275297 None:intergenic
TATGGATCATGTAGATTCAC+GGG 0.529471 4.4:+14278458 MS.gene049885:CDS
TCAACAATTTGTTTCACTGA+AGG 0.529602 4.4:-14275779 None:intergenic
AGGTTCACACTTGCTCCAAA+GGG 0.533006 4.4:-14278644 None:intergenic
GCTCCAAAGGGACTTGAAGA+AGG 0.533251 4.4:-14278632 None:intergenic
ACCAATATTGACGTAATGGT+TGG 0.534264 4.4:+14275323 MS.gene049885:CDS
TAATAGTATGTTTGATGCAA+TGG 0.537663 4.4:+14275823 MS.gene049885:CDS
AAAACTGGAGGACTTGGTAG+AGG 0.537983 4.4:-14275652 None:intergenic
AAACCTTAACTTTCGTGTCA+AGG 0.539991 4.4:+14275547 MS.gene049885:CDS
GGTGCTTCTGGCCAGATCAC+CGG 0.544240 4.4:+14276157 MS.gene049885:CDS
CGGAAAAGAGCATATTCAAG+AGG 0.547626 4.4:-14275749 None:intergenic
AGCTGGGCTTGTGGACAAGG+TGG 0.549943 4.4:+14276253 MS.gene049885:CDS
TAGCAGAAATCATATACTGA+AGG 0.551167 4.4:-14278679 None:intergenic
CAATAATAATATGATTCAGC+GGG 0.551216 4.4:+14275976 MS.gene049885:CDS
TTATGGATCATGTAGATTCA+CGG 0.551783 4.4:+14278457 MS.gene049885:CDS
GCTGCAAAATGGCCTGAGCT+GGG 0.554088 4.4:+14276237 MS.gene049885:CDS
AGCTATTGCCGTGATATTGG+TGG 0.555340 4.4:-14275435 None:intergenic
TTGTGAAGAGAATTCATGGC+AGG 0.555371 4.4:-14275509 None:intergenic
TAGAAGGCGGAAAAGGCTTA+GGG 0.556717 4.4:-14275598 None:intergenic
GGCTTGTAGTAAGTGGGCAT+TGG 0.559615 4.4:-14275291 None:intergenic
ATTTGTTTCACTGAAGGAAG+GGG 0.561756 4.4:-14275773 None:intergenic
AATTTGTTTCACTGAAGGAA+GGG 0.563972 4.4:-14275774 None:intergenic
AGTGTATCCATAATAAGGAT+AGG 0.566351 4.4:-14275708 None:intergenic
GATATCAGCTCTGGCGCTGG+AGG 0.567449 4.4:+14278581 MS.gene049885:intron
TTTAATGAAGACAAGAGGAA+TGG 0.571538 4.4:+14276064 MS.gene049885:CDS
CACCGGAAGTGGAAACTCCA+CGG 0.574611 4.4:+14276174 MS.gene049885:CDS
AGGAGTGAGTTTACCTCCTA+CGG 0.576015 4.4:+14278601 MS.gene049885:CDS
AGGATAGGCATTTAACATGA+AGG 0.580033 4.4:-14275693 None:intergenic
GTTTCACTGAAGGAAGGGGT+CGG 0.583280 4.4:-14275769 None:intergenic
GTTTATCCTTTAAGTTATGG+TGG 0.583487 4.4:+14276136 MS.gene049885:CDS
GGTATATTTGGCTGACTAGG+TGG 0.585369 4.4:-14276016 None:intergenic
GCAACCACGTTTGAAGCAGA+TGG 0.585868 4.4:-14275224 None:intergenic
ATTCATGGCAGGAACAAGAA+CGG 0.587611 4.4:-14275498 None:intergenic
AACTGTTTAATGAAGACAAG+AGG 0.588887 4.4:+14276059 MS.gene049885:CDS
AGCAGAAATCATATACTGAA+GGG 0.597856 4.4:-14278678 None:intergenic
AATATCACGGCAATAGCTGT+TGG 0.600783 4.4:+14275440 MS.gene049885:CDS
CATTATAAGCATATGAGGCA+TGG 0.602398 4.4:-14276336 None:intergenic
GAAGGTCCAAGTGCCGTAGG+AGG 0.605585 4.4:-14278614 None:intergenic
TAGTATGTTTGATGCAATGG+TGG 0.610619 4.4:+14275826 MS.gene049885:CDS
TACTGCCGAAATCACTTCCA+AGG 0.617350 4.4:+14276408 MS.gene049885:CDS
ACCGGAAGTGGAAACTCCAC+GGG 0.619367 4.4:+14276175 MS.gene049885:CDS
TTGTTGTCACAGAAACTGGT+TGG 0.627711 4.4:+14275897 MS.gene049885:CDS
ACAATAATAATATGATTCAG+CGG 0.628028 4.4:+14275975 MS.gene049885:CDS
AAACTGGAGGACTTGGTAGA+GGG 0.629652 4.4:-14275651 None:intergenic
GAAGAAGGTCCAAGTGCCGT+AGG 0.630220 4.4:-14278617 None:intergenic
ACCAGTTTCTGTGACAACAA+CGG 0.631360 4.4:-14275894 None:intergenic
TGTACCGTCCACCAATATCA+CGG 0.631792 4.4:+14275427 MS.gene049885:CDS
GATCATGTAGATTCACGGGA+AGG 0.634261 4.4:+14278462 MS.gene049885:CDS
TATGGATACACTAAAGGAGA+CGG 0.634399 4.4:+14275719 MS.gene049885:CDS
GGGATAATATCCATAGATTG+GGG 0.634850 4.4:-14275578 None:intergenic
ATGTATATTACCCAATGTAG+AGG 0.636027 4.4:-14274341 None:intergenic
GGCAATAGCTGTTGGCAGCG+AGG 0.643445 4.4:+14275448 MS.gene049885:CDS
AGCAACACAAAATATTCCCG+TGG 0.650048 4.4:-14276191 None:intergenic
AGATGGCATATCAGAGACAT+CGG 0.654046 4.4:-14275207 None:intergenic
GGAAAAGAGCATATTCAAGA+GGG 0.662200 4.4:-14275748 None:intergenic
ATAGGCATTTAACATGAAGG+AGG 0.667486 4.4:-14275690 None:intergenic
TTAAAGGTGGCAGTAGAAGG+CGG 0.668103 4.4:-14275611 None:intergenic
AATGGTTGGTGTCACCAATG+AGG 0.672733 4.4:+14275337 MS.gene049885:CDS
GGTTGGTGTCACCAATGAGG+AGG 0.674142 4.4:+14275340 MS.gene049885:CDS
GTTCCACGAAGAGTTAAAGG+TGG 0.677803 4.4:-14275624 None:intergenic
TATGCCATCTGCTTCAAACG+TGG 0.689794 4.4:+14275220 MS.gene049885:CDS
AACTGCGCTCCTATTCAACA+AGG 0.698361 4.4:+14276280 MS.gene049885:CDS
ATTGCCGTGATATTGGTGGA+CGG 0.716336 4.4:-14275431 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATATTTATTATATGATGAT+TGG - chr4.4:14277175-14277194 None:intergenic 10.0%
!! AGTTTGAAAAAAAAAAATTA+GGG - chr4.4:14278117-14278136 None:intergenic 10.0%
!! CTTATTTATAAGAAAAAATT+GGG - chr4.4:14277085-14277104 None:intergenic 10.0%
!! TAGTTTGAAAAAAAAAAATT+AGG - chr4.4:14278118-14278137 None:intergenic 10.0%
!!! TCTTATTTATAAGAAAAAAT+TGG - chr4.4:14277086-14277105 None:intergenic 10.0%
!!! AAGTGATTATAAACTTTTAA+TGG - chr4.4:14278384-14278403 None:intergenic 15.0%
!!! AATTCTTACTTTTGTTTTAT+TGG + chr4.4:14276450-14276469 MS.gene049885:intron 15.0%
!!! GTTCTAAATTTAATTAATCA+TGG - chr4.4:14278517-14278536 None:intergenic 15.0%
!!! TTCTAAAAATAAATTATGTG+TGG + chr4.4:14277484-14277503 MS.gene049885:intron 15.0%
!!! TTTTCCTTTATTATTTTACT+TGG + chr4.4:14275018-14275037 MS.gene049885:intron 15.0%
!!! TTTTTTCTTATAAATAAGAC+CGG + chr4.4:14277087-14277106 MS.gene049885:intron 15.0%
!! AAAGCCAAGTAAAATAATAA+AGG - chr4.4:14275025-14275044 None:intergenic 20.0%
!! ACAATAATAATATGATTCAG+CGG + chr4.4:14275975-14275994 MS.gene049885:CDS 20.0%
!! ACAATTTATGCAGTATTAAA+TGG - chr4.4:14278431-14278450 None:intergenic 20.0%
!! ATAATCATTATAAGCATATG+AGG - chr4.4:14276344-14276363 None:intergenic 20.0%
!! ATTAAACAGTTCATATATGT+AGG - chr4.4:14276050-14276069 None:intergenic 20.0%
!! CTAAAAACAACTTATAGATA+TGG + chr4.4:14274505-14274524 MS.gene049885:intron 20.0%
!! CTGAATCATATTATTATTGT+AGG - chr4.4:14275975-14275994 None:intergenic 20.0%
!! GATTATTATCAGAAAAATCA+AGG + chr4.4:14276358-14276377 MS.gene049885:CDS 20.0%
!! GTATTAGTATTAATGTTGTT+TGG + chr4.4:14277319-14277338 MS.gene049885:intron 20.0%
!! TAAAATTCTTATCTGATCAT+GGG + chr4.4:14278551-14278570 MS.gene049885:intron 20.0%
!! TCATATATGTAGGTATTAAT+GGG - chr4.4:14276040-14276059 None:intergenic 20.0%
!! TTAAAATTCTTATCTGATCA+TGG + chr4.4:14278550-14278569 MS.gene049885:intron 20.0%
!! TTCATATATGTAGGTATTAA+TGG - chr4.4:14276041-14276060 None:intergenic 20.0%
!!! ATTATTCTGAAATTATTGGT+GGG + chr4.4:14277748-14277767 MS.gene049885:intron 20.0%
!!! ATTGATTGATAATATTGAAC+CGG + chr4.4:14277214-14277233 MS.gene049885:intron 20.0%
!!! CAATTTTAACAAGCTTTTTT+CGG - chr4.4:14274770-14274789 None:intergenic 20.0%
!!! GCTGTTTTTATAAGTTATAT+TGG + chr4.4:14274726-14274745 MS.gene049885:intron 20.0%
!!! TACTTTTGTTTTATTGGATT+TGG + chr4.4:14276456-14276475 MS.gene049885:intron 20.0%
!!! TTAACATTTTTACTTAGAGT+GGG + chr4.4:14276846-14276865 MS.gene049885:intron 20.0%
!!! TTATTTTCTTTTCTAAGTCA+AGG + chr4.4:14277447-14277466 MS.gene049885:intron 20.0%
!!! TTGCATTATTCTGAAATTAT+TGG + chr4.4:14277744-14277763 MS.gene049885:intron 20.0%
!!! TTTAACATTTTTACTTAGAG+TGG + chr4.4:14276845-14276864 MS.gene049885:intron 20.0%
! AAAAACCAATATTGACGTAA+TGG + chr4.4:14275319-14275338 MS.gene049885:CDS 25.0%
! AAAACCATTGCAAAATGAAT+TGG - chr4.4:14274880-14274899 None:intergenic 25.0%
! AAACCATTGCAAAATGAATT+GGG - chr4.4:14274879-14274898 None:intergenic 25.0%
! AACAAGTTCATTCAATGTAA+TGG - chr4.4:14275150-14275169 None:intergenic 25.0%
! AATAAGTTGTTTATCCAAAC+AGG - chr4.4:14274595-14274614 None:intergenic 25.0%
! AATACTGCATAAATTGTTTC+AGG + chr4.4:14278434-14278453 MS.gene049885:intron 25.0%
! AATCTGTATTAGAGTATGTT+TGG + chr4.4:14277390-14277409 MS.gene049885:intron 25.0%
! ACCATAACTTAAAGGATAAA+CGG - chr4.4:14276137-14276156 None:intergenic 25.0%
! ACCATCTAAAGAAATAACAT+GGG - chr4.4:14276671-14276690 None:intergenic 25.0%
! AGATACATTGTTGAAAAAGT+TGG - chr4.4:14278315-14278334 None:intergenic 25.0%
! ATATGATGATTGGAAAAATG+AGG - chr4.4:14277165-14277184 None:intergenic 25.0%
! ATGATAACCGCTTAATTAAA+AGG - chr4.4:14274370-14274389 None:intergenic 25.0%
! ATGCAAATTTAAGAGACTAA+TGG - chr4.4:14274968-14274987 None:intergenic 25.0%
! CAATAATAATATGATTCAGC+GGG + chr4.4:14275976-14275995 MS.gene049885:CDS 25.0%
! CAGTTAATATCACAAAATCT+CGG + chr4.4:14274935-14274954 MS.gene049885:intron 25.0%
! CTATTAGAAATGTCTTCTTA+TGG + chr4.4:14277707-14277726 MS.gene049885:intron 25.0%
! CTCAAATTTCTCTTGTAAAT+AGG - chr4.4:14277003-14277022 None:intergenic 25.0%
! GGAAAACAAAATATGAACTA+TGG - chr4.4:14275004-14275023 None:intergenic 25.0%
! GTCATTATAATTCAACAAAG+TGG - chr4.4:14276932-14276951 None:intergenic 25.0%
! GTTTGGATAAACAACTTATT+TGG + chr4.4:14274595-14274614 MS.gene049885:intron 25.0%
! TAAAGAAATAACATGGGATT+TGG - chr4.4:14276665-14276684 None:intergenic 25.0%
! TAATAGTATGTTTGATGCAA+TGG + chr4.4:14275823-14275842 MS.gene049885:CDS 25.0%
! TATACCAAACATATTGTTAG+TGG + chr4.4:14277571-14277590 MS.gene049885:intron 25.0%
! TATGATGATTGGAAAAATGA+GGG - chr4.4:14277164-14277183 None:intergenic 25.0%
! TCAAATAAGTCATTCTAAAC+AGG + chr4.4:14274852-14274871 MS.gene049885:intron 25.0%
! TTAAATGCCTATCCTTATTA+TGG + chr4.4:14275701-14275720 MS.gene049885:CDS 25.0%
! TTAAATGTTAGCACAAGATT+GGG - chr4.4:14276830-14276849 None:intergenic 25.0%
! TTATAGTGATATAGTGTGTT+TGG - chr4.4:14275806-14275825 None:intergenic 25.0%
! TTTCAATAAGTTTAATGCCT+AGG - chr4.4:14277672-14277691 None:intergenic 25.0%
! TTTGAAAAGAGAAATAGACA+CGG - chr4.4:14277821-14277840 None:intergenic 25.0%
!! ATTTTTATTAATCCAAGCTG+CGG - chr4.4:14275396-14275415 None:intergenic 25.0%
!! GAGATTTTGTGATATTAACT+GGG - chr4.4:14274936-14274955 None:intergenic 25.0%
!! TAACATTTTTACTTAGAGTG+GGG + chr4.4:14276847-14276866 MS.gene049885:intron 25.0%
!! TAGGTATTAATGGGTATATT+TGG - chr4.4:14276031-14276050 None:intergenic 25.0%
!! TTTTATATTGAACATGCCAT+CGG + chr4.4:14276713-14276732 MS.gene049885:intron 25.0%
!! TTTTCAAACTAGTACTTATC+AGG + chr4.4:14278127-14278146 MS.gene049885:intron 25.0%
!!! AATGAACTTGTTGAATTTGT+AGG + chr4.4:14275158-14275177 MS.gene049885:intron 25.0%
!!! ACATCTTCCTTTTAATTAAG+CGG + chr4.4:14274360-14274379 MS.gene049885:intron 25.0%
!!! ATATTTTGTGTTGCTAAAGA+TGG + chr4.4:14276199-14276218 MS.gene049885:CDS 25.0%
!!! ATGAGGCATTTTTTTAGATT+TGG + chr4.4:14277612-14277631 MS.gene049885:intron 25.0%
!!! CATTATTCTGAAATTATTGG+TGG + chr4.4:14277747-14277766 MS.gene049885:intron 25.0%
!!! GATATATGATGGATAATTCA+TGG + chr4.4:14275123-14275142 MS.gene049885:intron 25.0%
!!! GGGTATATCTTTGAAATTTA+AGG - chr4.4:14275876-14275895 None:intergenic 25.0%
!!! GTCAATATTGGTTTTTGAAA+GGG - chr4.4:14275315-14275334 None:intergenic 25.0%
!!! TGAGGCATTTTTTTAGATTT+GGG + chr4.4:14277613-14277632 MS.gene049885:intron 25.0%
!!! TTATTCTGAAATTATTGGTG+GGG + chr4.4:14277749-14277768 MS.gene049885:intron 25.0%
AACCATTGCAAAATGAATTG+GGG - chr4.4:14274878-14274897 None:intergenic 30.0%
AACTGTTTAATGAAGACAAG+AGG + chr4.4:14276059-14276078 MS.gene049885:CDS 30.0%
AAGCTTAAAAAATGGCTTGA+AGG + chr4.4:14274289-14274308 MS.gene049885:CDS 30.0%
AATTCGTGTTTCTCAAAAAC+TGG - chr4.4:14275670-14275689 None:intergenic 30.0%
ACACAATGACATTATAACTC+CGG - chr4.4:14277236-14277255 None:intergenic 30.0%
AGAATTCGTATCAACTTACT+TGG - chr4.4:14276436-14276455 None:intergenic 30.0%
AGATATGGCATAAACTGTTT+AGG + chr4.4:14274520-14274539 MS.gene049885:intron 30.0%
AGCAGAAATCATATACTGAA+GGG - chr4.4:14278681-14278700 None:intergenic 30.0%
AGCTCATAAAATACCATTGA+AGG + chr4.4:14277948-14277967 MS.gene049885:intron 30.0%
AGGATATTCAAATACATGGA+AGG + chr4.4:14277133-14277152 MS.gene049885:intron 30.0%
AGGGATAATATCCATAGATT+GGG - chr4.4:14275582-14275601 None:intergenic 30.0%
AGTGTATCCATAATAAGGAT+AGG - chr4.4:14275711-14275730 None:intergenic 30.0%
ATGTATATTACCCAATGTAG+AGG - chr4.4:14274344-14274363 None:intergenic 30.0%
ATGTCTCTCTTCAAAAATAC+TGG - chr4.4:14277860-14277879 None:intergenic 30.0%
ATTTATCGTGACAAGATAAC+TGG + chr4.4:14277883-14277902 MS.gene049885:intron 30.0%
ATTTCTCTTGTAAATAGGAC+CGG - chr4.4:14276998-14277017 None:intergenic 30.0%
CAGTATATGATTTCTGCTAT+TGG + chr4.4:14278683-14278702 MS.gene049885:CDS 30.0%
CATAAAAAGATTCTCTCCAA+TGG + chr4.4:14278286-14278305 MS.gene049885:intron 30.0%
CCATGTATTTGAATATCCTA+AGG - chr4.4:14277132-14277151 None:intergenic 30.0%
CCTTAGGATATTCAAATACA+TGG + chr4.4:14277129-14277148 MS.gene049885:intron 30.0%
CCTTATTATGGATACACTAA+AGG + chr4.4:14275713-14275732 MS.gene049885:CDS 30.0%
CCTTTAGTGTATCCATAATA+AGG - chr4.4:14275716-14275735 None:intergenic 30.0%
GACCATCTAAAGAAATAACA+TGG - chr4.4:14276672-14276691 None:intergenic 30.0%
GATGGCATGTTCAATATAAA+AGG - chr4.4:14276714-14276733 None:intergenic 30.0%
GTTAAATGTTAGCACAAGAT+TGG - chr4.4:14276831-14276850 None:intergenic 30.0%
TACTCTAATACAGATTTACG+AGG - chr4.4:14277386-14277405 None:intergenic 30.0%
TAGCAGAAATCATATACTGA+AGG - chr4.4:14278682-14278701 None:intergenic 30.0%
TAGGGATAATATCCATAGAT+TGG - chr4.4:14275583-14275602 None:intergenic 30.0%
TATCAGAAAAATCAAGGTGT+TGG + chr4.4:14276364-14276383 MS.gene049885:CDS 30.0%
TATGCCACTAACAATATGTT+TGG - chr4.4:14277578-14277597 None:intergenic 30.0%
TATTGGATTTGGATTTGATG+TGG + chr4.4:14276467-14276486 MS.gene049885:intron 30.0%
TGTATTAGAGTATGTTTGGA+TGG + chr4.4:14277394-14277413 MS.gene049885:intron 30.0%
TTATGGATCATGTAGATTCA+CGG + chr4.4:14278457-14278476 MS.gene049885:CDS 30.0%
TTCTTATAAATAAGACCGGA+GGG + chr4.4:14277091-14277110 MS.gene049885:intron 30.0%
TTTAATGAAGACAAGAGGAA+TGG + chr4.4:14276064-14276083 MS.gene049885:CDS 30.0%
TTTATCGTGACAAGATAACT+GGG + chr4.4:14277884-14277903 MS.gene049885:intron 30.0%
TTTCTTATAAATAAGACCGG+AGG + chr4.4:14277090-14277109 MS.gene049885:intron 30.0%
! AACATTTTTACTTAGAGTGG+GGG + chr4.4:14276848-14276867 MS.gene049885:intron 30.0%
! AATGACCCTATTTCAAGTAT+AGG + chr4.4:14276946-14276965 MS.gene049885:intron 30.0%
! AATTTGTTTCACTGAAGGAA+GGG - chr4.4:14275777-14275796 None:intergenic 30.0%
! CGAGATTTTGTGATATTAAC+TGG - chr4.4:14274937-14274956 None:intergenic 30.0%
! GTTTATCCTTTAAGTTATGG+TGG + chr4.4:14276136-14276155 MS.gene049885:CDS 30.0%
! TAAGGCATCTATAGAGTAAT+AGG - chr4.4:14275858-14275877 None:intergenic 30.0%
! TCAACAATTTGTTTCACTGA+AGG - chr4.4:14275782-14275801 None:intergenic 30.0%
!! GCATAAATTGTTTCAGGTTA+TGG + chr4.4:14278440-14278459 MS.gene049885:intron 30.0%
!! TATTCTGAAATTATTGGTGG+GGG + chr4.4:14277750-14277769 MS.gene049885:intron 30.0%
!! TCCCATGTTATTTCTTTAGA+TGG + chr4.4:14276667-14276686 MS.gene049885:intron 30.0%
!!! CGTCAATATTGGTTTTTGAA+AGG - chr4.4:14275316-14275335 None:intergenic 30.0%
AAACCTTAACTTTCGTGTCA+AGG + chr4.4:14275547-14275566 MS.gene049885:CDS 35.0%
AAACCTTGACACGAAAGTTA+AGG - chr4.4:14275553-14275572 None:intergenic 35.0%
ACAGGACCTATACTTGAAAT+AGG - chr4.4:14276955-14276974 None:intergenic 35.0%
ACCAACCATTACGTCAATAT+TGG - chr4.4:14275327-14275346 None:intergenic 35.0%
ACCAATATTGACGTAATGGT+TGG + chr4.4:14275323-14275342 MS.gene049885:CDS 35.0%
ACCTGTATCCGAAAAAAACT+GGG + chr4.4:14276087-14276106 MS.gene049885:CDS 35.0%
ACTGCAAATGCAAGCAATTT+GGG + chr4.4:14275094-14275113 MS.gene049885:intron 35.0%
AGAATAATGCAATCAGTTCC+AGG - chr4.4:14277736-14277755 None:intergenic 35.0%
AGGATAGGCATTTAACATGA+AGG - chr4.4:14275696-14275715 None:intergenic 35.0%
ATAGGCATTTAACATGAAGG+AGG - chr4.4:14275693-14275712 None:intergenic 35.0%
ATTAGAGTATGTTTGGATGG+AGG + chr4.4:14277397-14277416 MS.gene049885:intron 35.0%
ATTTGTTTCACTGAAGGAAG+GGG - chr4.4:14275776-14275795 None:intergenic 35.0%
CAGGACCTATACTTGAAATA+GGG - chr4.4:14276954-14276973 None:intergenic 35.0%
CAGTTGACCACTTTGATAAA+TGG + chr4.4:14277912-14277931 MS.gene049885:intron 35.0%
CATTATAAGCATATGAGGCA+TGG - chr4.4:14276339-14276358 None:intergenic 35.0%
CCACTTTGATAAATGGTCTA+TGG + chr4.4:14277919-14277938 MS.gene049885:intron 35.0%
CCATAGACCATTTATCAAAG+TGG - chr4.4:14277922-14277941 None:intergenic 35.0%
CTTCCACATCATAATGAGTA+AGG - chr4.4:14278159-14278178 None:intergenic 35.0%
CTTTGATAAATGGTCTATGG+TGG + chr4.4:14277922-14277941 MS.gene049885:intron 35.0%
GGGATAATATCCATAGATTG+GGG - chr4.4:14275581-14275600 None:intergenic 35.0%
TAAATGGTTAAATGCTCGCA+AGG - chr4.4:14278415-14278434 None:intergenic 35.0%
TAGCTATCTTAGAGAGCTTA+TGG + chr4.4:14274475-14274494 MS.gene049885:intron 35.0%
TAGTATGTTTGATGCAATGG+TGG + chr4.4:14275826-14275845 MS.gene049885:CDS 35.0%
TATATCTTGTCATGCCAACA+AGG - chr4.4:14278252-14278271 None:intergenic 35.0%
TATCAACTTACTTGGATCCT+TGG - chr4.4:14276428-14276447 None:intergenic 35.0%
TATGGATACACTAAAGGAGA+CGG + chr4.4:14275719-14275738 MS.gene049885:CDS 35.0%
TATGGATCATGTAGATTCAC+GGG + chr4.4:14278458-14278477 MS.gene049885:CDS 35.0%
TGCTTATGCTAGTAGATCAA+GGG + chr4.4:14274569-14274588 MS.gene049885:intron 35.0%
TTGAAAAAGTTGGCTACCAT+TGG - chr4.4:14278305-14278324 None:intergenic 35.0%
TTGGGGATGTAGATATATGA+TGG + chr4.4:14275112-14275131 MS.gene049885:intron 35.0%
! AATTTGTAGGTGCTTTTGTG+GGG + chr4.4:14275171-14275190 MS.gene049885:intron 35.0%
! AGCTTTGTGAAGAGAATTCA+TGG - chr4.4:14275516-14275535 None:intergenic 35.0%
! CAATTTGTTTCACTGAAGGA+AGG - chr4.4:14275778-14275797 None:intergenic 35.0%
! CATGGCTTTTCACATTATTG+GGG - chr4.4:14276321-14276340 None:intergenic 35.0%
! GAATTTGTAGGTGCTTTTGT+GGG + chr4.4:14275170-14275189 MS.gene049885:intron 35.0%
! GCATGGCTTTTCACATTATT+GGG - chr4.4:14276322-14276341 None:intergenic 35.0%
! GCCGTTTATCCTTTAAGTTA+TGG + chr4.4:14276133-14276152 MS.gene049885:CDS 35.0%
! GGAAAAGAGCATATTCAAGA+GGG - chr4.4:14275751-14275770 None:intergenic 35.0%
! GGAGTACTAGTAAACAAAAC+AGG - chr4.4:14276973-14276992 None:intergenic 35.0%
! TGAATTTGTAGGTGCTTTTG+TGG + chr4.4:14275169-14275188 MS.gene049885:intron 35.0%
! TTTCAAGTATTTACCCACTG+TGG + chr4.4:14278222-14278241 MS.gene049885:intron 35.0%
! TTTGGATGGAGGATTTTGAA+AGG + chr4.4:14277408-14277427 MS.gene049885:intron 35.0%
!! AATGAGGAGGTATTGAGAAT+CGG + chr4.4:14275353-14275372 MS.gene049885:CDS 35.0%
!! ATGGAGGATTTTGAAAGGAA+GGG + chr4.4:14277413-14277432 MS.gene049885:intron 35.0%
!! ATTCTGAAATTATTGGTGGG+GGG + chr4.4:14277751-14277770 MS.gene049885:intron 35.0%
!! TGCATTCTTGCTGATTCTAT+AGG + chr4.4:14277352-14277371 MS.gene049885:intron 35.0%
!! TGGCTTTATAGTTACAAGCA+AGG + chr4.4:14275038-14275057 MS.gene049885:intron 35.0%
!!! GGTTATTTTGATATCAGCTC+TGG + chr4.4:14278572-14278591 MS.gene049885:intron 35.0%
AACAGCTATTGCCGTGATAT+TGG - chr4.4:14275441-14275460 None:intergenic 40.0%
AATATCACGGCAATAGCTGT+TGG + chr4.4:14275440-14275459 MS.gene049885:CDS 40.0%
AATGTCTTCTTATGGCATCC+TGG + chr4.4:14277715-14277734 MS.gene049885:intron 40.0%
AATGTTAGCACAAGATTGGG+TGG - chr4.4:14276827-14276846 None:intergenic 40.0%
ACCAGTTTCTGTGACAACAA+CGG - chr4.4:14275897-14275916 None:intergenic 40.0%
ACGACTCATGTAAAAGCTCA+AGG - chr4.4:14278183-14278202 None:intergenic 40.0%
ACGCACGTGAGTAATTTGAT+TGG - chr4.4:14275261-14275280 None:intergenic 40.0%
AGAGTTCCACGAAGAGTTAA+AGG - chr4.4:14275630-14275649 None:intergenic 40.0%
AGATGGCATATCAGAGACAT+CGG - chr4.4:14275210-14275229 None:intergenic 40.0%
AGCAACACAAAATATTCCCG+TGG - chr4.4:14276194-14276213 None:intergenic 40.0%
AGCGTCCACTCTTAATTCTA+CGG - chr4.4:14276530-14276549 None:intergenic 40.0%
ATACTGACGTCAGTTTCATG+AGG + chr4.4:14277595-14277614 MS.gene049885:intron 40.0%
ATGGGTATATTTGGCTGACT+AGG - chr4.4:14276022-14276041 None:intergenic 40.0%
ATGTTAGCACAAGATTGGGT+GGG - chr4.4:14276826-14276845 None:intergenic 40.0%
ATTCATGGCAGGAACAAGAA+CGG - chr4.4:14275501-14275520 None:intergenic 40.0%
CAACAAAGTGGTTCATGAGA+TGG - chr4.4:14276920-14276939 None:intergenic 40.0%
CACTGCAAATGCAAGCAATT+TGG + chr4.4:14275093-14275112 MS.gene049885:intron 40.0%
CATGGGATTTGGATCACAAT+TGG - chr4.4:14276620-14276639 None:intergenic 40.0%
CATTTACGCAGTGAACACAT+AGG + chr4.4:14276501-14276520 MS.gene049885:intron 40.0%
CCACATCATAATGAGTAAGG+TGG - chr4.4:14278156-14278175 None:intergenic 40.0%
CCACCTTACTCATTATGATG+TGG + chr4.4:14278153-14278172 MS.gene049885:intron 40.0%
CCTGTATCCGAAAAAAACTG+GGG + chr4.4:14276088-14276107 MS.gene049885:CDS 40.0%
CTGCAAATGCAAGCAATTTG+GGG + chr4.4:14275095-14275114 MS.gene049885:intron 40.0%
GAATTCTCTTCACAAAGCTC+TGG + chr4.4:14275517-14275536 MS.gene049885:CDS 40.0%
GACACTGATAAGCTGCAAAA+TGG + chr4.4:14276226-14276245 MS.gene049885:CDS 40.0%
GACCTGTATCCGAAAAAAAC+TGG + chr4.4:14276086-14276105 MS.gene049885:CDS 40.0%
GATTCTCAATACCTCCTCAT+TGG - chr4.4:14275354-14275373 None:intergenic 40.0%
GCTATGCTAACCTCTACATT+GGG + chr4.4:14274331-14274350 MS.gene049885:CDS 40.0%
GTGCTTATGCTAGTAGATCA+AGG + chr4.4:14274568-14274587 MS.gene049885:intron 40.0%
TAATACTCACGCAACCATCT+AGG - chr4.4:14277305-14277324 None:intergenic 40.0%
TCATTTGCTCCACCAAAAGA+TGG - chr4.4:14275923-14275942 None:intergenic 40.0%
TCGTGTTTCTCAAAAACTGG+AGG - chr4.4:14275667-14275686 None:intergenic 40.0%
TGAAAGGGCTTGTAGTAAGT+GGG - chr4.4:14275300-14275319 None:intergenic 40.0%
TGCTATGCTAACCTCTACAT+TGG + chr4.4:14274330-14274349 MS.gene049885:CDS 40.0%
TGCTTGCATTTGCAGTGAAT+AGG - chr4.4:14275090-14275109 None:intergenic 40.0%
TGGATCCTTGGAAGTGATTT+CGG - chr4.4:14276416-14276435 None:intergenic 40.0%
TTCTCAAAAACTGGAGGACT+TGG - chr4.4:14275661-14275680 None:intergenic 40.0%
TTGAAAGGGCTTGTAGTAAG+TGG - chr4.4:14275301-14275320 None:intergenic 40.0%
TTGTGAAGAGAATTCATGGC+AGG - chr4.4:14275512-14275531 None:intergenic 40.0%
TTGTTGTCACAGAAACTGGT+TGG + chr4.4:14275897-14275916 MS.gene049885:CDS 40.0%
TTGTTTACTAGTACTCCCTC+CGG + chr4.4:14276976-14276995 MS.gene049885:intron 40.0%
! AGCATTTTCTGCAGTAGCAT+CGG - chr4.4:14275948-14275967 None:intergenic 40.0%
! ATTTGTAGGTGCTTTTGTGG+GGG + chr4.4:14275172-14275191 MS.gene049885:intron 40.0%
! CGGAAAAGAGCATATTCAAG+AGG - chr4.4:14275752-14275771 None:intergenic 40.0%
! CTTTTTGGATAGTTAGCCGA+TGG - chr4.4:14276732-14276751 None:intergenic 40.0%
! GAAGCACCACCATAACTTAA+AGG - chr4.4:14276145-14276164 None:intergenic 40.0%
! GCTTTTACATGAGTCGTCTT+TGG + chr4.4:14278186-14278205 MS.gene049885:intron 40.0%
! GGCATGGCTTTTCACATTAT+TGG - chr4.4:14276323-14276342 None:intergenic 40.0%
! TTAAGTTATGGTGGTGCTTC+TGG + chr4.4:14276145-14276164 MS.gene049885:CDS 40.0%
!! CAGAAAAATCAAGGTGTTGG+TGG + chr4.4:14276367-14276386 MS.gene049885:CDS 40.0%
!! CATGGGATTTGGATTTGTTG+AGG - chr4.4:14276654-14276673 None:intergenic 40.0%
!! GAGTATTAGCTTTGCTCCTT+AGG + chr4.4:14277113-14277132 MS.gene049885:intron 40.0%
!! GATGGAGGATTTTGAAAGGA+AGG + chr4.4:14277412-14277431 MS.gene049885:intron 40.0%
!! GGATTTTGAAAGGAAGGGTA+CGG + chr4.4:14277418-14277437 MS.gene049885:intron 40.0%
!! TGTTGGTTCGACAAACACAA+GGG + chr4.4:14278050-14278069 MS.gene049885:intron 40.0%
AACTGCGCTCCTATTCAACA+AGG + chr4.4:14276280-14276299 MS.gene049885:CDS 45.0%
ACAAGAACGGGAGCAACATT+TGG - chr4.4:14275488-14275507 None:intergenic 45.0%
AGCAAAGCTAATACTCCCTC+CGG - chr4.4:14277109-14277128 None:intergenic 45.0%
AGCTATTGCCGTGATATTGG+TGG - chr4.4:14275438-14275457 None:intergenic 45.0%
AGGAGTGAGTTTACCTCCTA+CGG + chr4.4:14278601-14278620 MS.gene049885:CDS 45.0%
AGGTTCACACTTGCTCCAAA+GGG - chr4.4:14278647-14278666 None:intergenic 45.0%
ATCCAAAAAGCCTACGCTGT+TGG + chr4.4:14276742-14276761 MS.gene049885:intron 45.0%
ATCTTGTCATGCCAACAAGG+TGG - chr4.4:14278249-14278268 None:intergenic 45.0%
ATTGCCGTGATATTGGTGGA+CGG - chr4.4:14275434-14275453 None:intergenic 45.0%
CAAGAACGGGAGCAACATTT+GGG - chr4.4:14275487-14275506 None:intergenic 45.0%
CATCGCTGTCCTTGTTGAAT+AGG - chr4.4:14276292-14276311 None:intergenic 45.0%
CCAGTTTCTGTGACAACAAC+GGG - chr4.4:14275896-14275915 None:intergenic 45.0%
CCTTTGTAAGCAGAAGCTCA+CGG + chr4.4:14277981-14278000 MS.gene049885:intron 45.0%
CGTGAGCTTCTGCTTACAAA+GGG - chr4.4:14277983-14278002 None:intergenic 45.0%
CTCTTGTAAATAGGACCGGA+GGG - chr4.4:14276994-14277013 None:intergenic 45.0%
GAAATTGCCCAGATCCTAGA+TGG + chr4.4:14277288-14277307 MS.gene049885:intron 45.0%
GAGTTAAAGGTGGCAGTAGA+AGG - chr4.4:14275617-14275636 None:intergenic 45.0%
GATCATGTAGATTCACGGGA+AGG + chr4.4:14278462-14278481 MS.gene049885:CDS 45.0%
GATTGTGACCTGATGAGTGT+TGG + chr4.4:14278033-14278052 MS.gene049885:intron 45.0%
GGTATATTTGGCTGACTAGG+TGG - chr4.4:14276019-14276038 None:intergenic 45.0%
GGTGACCGTAGAATTAAGAG+TGG + chr4.4:14276522-14276541 MS.gene049885:intron 45.0%
GGTGGAACTTGTGACTTTGA+TGG + chr4.4:14276385-14276404 MS.gene049885:CDS 45.0%
GTTCCACGAAGAGTTAAAGG+TGG - chr4.4:14275627-14275646 None:intergenic 45.0%
TACTGCCGAAATCACTTCCA+AGG + chr4.4:14276408-14276427 MS.gene049885:CDS 45.0%
TAGAAGGCGGAAAAGGCTTA+GGG - chr4.4:14275601-14275620 None:intergenic 45.0%
TAGGTGGACCAGAATCATTC+AGG - chr4.4:14276003-14276022 None:intergenic 45.0%
TAGTAGATCAAGGGCCTGTT+TGG + chr4.4:14274578-14274597 MS.gene049885:intron 45.0%
TATGCCATCTGCTTCAAACG+TGG + chr4.4:14275220-14275239 MS.gene049885:CDS 45.0%
TCACGCATTCACATGGGATT+TGG - chr4.4:14276631-14276650 None:intergenic 45.0%
TCCAAAAAGCCTACGCTGTT+GGG + chr4.4:14276743-14276762 MS.gene049885:intron 45.0%
TCTCTTGTAAATAGGACCGG+AGG - chr4.4:14276995-14277014 None:intergenic 45.0%
TGTACCGTCCACCAATATCA+CGG + chr4.4:14275427-14275446 MS.gene049885:CDS 45.0%
TTAAAGGTGGCAGTAGAAGG+CGG - chr4.4:14275614-14275633 None:intergenic 45.0%
TTCATGGCAGGAACAAGAAC+GGG - chr4.4:14275500-14275519 None:intergenic 45.0%
TTGAGGTCACGCATTCACAT+GGG - chr4.4:14276637-14276656 None:intergenic 45.0%
TTGTCGAACCAACACTCATC+AGG - chr4.4:14278044-14278063 None:intergenic 45.0%
! AAAACTGGAGGACTTGGTAG+AGG - chr4.4:14275655-14275674 None:intergenic 45.0%
! AAACTGGAGGACTTGGTAGA+GGG - chr4.4:14275654-14275673 None:intergenic 45.0%
! CTGCTTACAAAGGGAAGCAT+TGG - chr4.4:14277974-14277993 None:intergenic 45.0%
! GATATTGGTGGACGGTACAT+AGG - chr4.4:14275426-14275445 None:intergenic 45.0%
! GCATTTTCTGCAGTAGCATC+GGG - chr4.4:14275947-14275966 None:intergenic 45.0%
! GCTTTTGTGGGGGTAAACAT+TGG + chr4.4:14275182-14275201 MS.gene049885:CDS 45.0%
! GGCCCCAATTCATTTTGCAA+TGG + chr4.4:14274873-14274892 MS.gene049885:intron 45.0%
! TTTTGTGATCCTGATGCGCA+TGG + chr4.4:14277646-14277665 MS.gene049885:intron 45.0%
!! AATGGTTGGTGTCACCAATG+AGG + chr4.4:14275337-14275356 MS.gene049885:CDS 45.0%
!! GAAACTGGTTGGCCATCTTT+TGG + chr4.4:14275908-14275927 MS.gene049885:CDS 45.0%
!! GTGTTGGTTCGACAAACACA+AGG + chr4.4:14278049-14278068 MS.gene049885:intron 45.0%
!! TGGGGCATCGTCTATACTAA+TGG + chr4.4:14276106-14276125 MS.gene049885:CDS 45.0%
!!! CCCCAGTTTTTTTCGGATAC+AGG - chr4.4:14276091-14276110 None:intergenic 45.0%
!!! GACGATGCCCCAGTTTTTTT+CGG - chr4.4:14276098-14276117 None:intergenic 45.0%
ACTGAAGGGTAGACACTTGC+AGG - chr4.4:14278667-14278686 None:intergenic 50.0%
AGTTTACCTCCTACGGCACT+TGG + chr4.4:14278608-14278627 MS.gene049885:CDS 50.0%
AGTTTCCACTTCCGGTGATC+TGG - chr4.4:14276171-14276190 None:intergenic 50.0%
CAGGTTCACACTTGCTCCAA+AGG - chr4.4:14278648-14278667 None:intergenic 50.0%
CCCGTTGTTGTCACAGAAAC+TGG + chr4.4:14275893-14275912 MS.gene049885:CDS 50.0%
CCGTGAGCTTCTGCTTACAA+AGG - chr4.4:14277984-14278003 None:intergenic 50.0%
CTGCCACCTTTAACTCTTCG+TGG + chr4.4:14275621-14275640 MS.gene049885:CDS 50.0%
GCATACGCTTCAAGCCCAAA+GGG - chr4.4:14276793-14276812 None:intergenic 50.0%
GCTCCAAAGGGACTTGAAGA+AGG - chr4.4:14278635-14278654 None:intergenic 50.0%
GGACCTTCTTCAAGTCCCTT+TGG + chr4.4:14278629-14278648 MS.gene049885:CDS 50.0%
GGCTTGTAGTAAGTGGGCAT+TGG - chr4.4:14275294-14275313 None:intergenic 50.0%
GGTTTCGACTCCCCAATCTA+TGG + chr4.4:14275568-14275587 MS.gene049885:CDS 50.0%
GTAGAAGGCGGAAAAGGCTT+AGG - chr4.4:14275602-14275621 None:intergenic 50.0%
GTTGAGGTCACGCATTCACA+TGG - chr4.4:14276638-14276657 None:intergenic 50.0%
GTTTCACTGAAGGAAGGGGT+CGG - chr4.4:14275772-14275791 None:intergenic 50.0%
TGCATACGCTTCAAGCCCAA+AGG - chr4.4:14276794-14276813 None:intergenic 50.0%
! ACCCAACAGCGTAGGCTTTT+TGG - chr4.4:14276747-14276766 None:intergenic 50.0%
! CACGCAACCATCTAGGATCT+GGG - chr4.4:14277298-14277317 None:intergenic 50.0%
! GCAACCACGTTTGAAGCAGA+TGG - chr4.4:14275227-14275246 None:intergenic 50.0%
! GGGAGCAACATTTGGGATTG+TGG - chr4.4:14275480-14275499 None:intergenic 50.0%
! GTGTTTTCACCCAACAGCGT+AGG - chr4.4:14276755-14276774 None:intergenic 50.0%
! TCACGCAACCATCTAGGATC+TGG - chr4.4:14277299-14277318 None:intergenic 50.0%
! TTGAAAGGAAGGGTACGGCA+GGG + chr4.4:14277423-14277442 MS.gene049885:intron 50.0%
! TTTGAAAGGAAGGGTACGGC+AGG + chr4.4:14277422-14277441 MS.gene049885:intron 50.0%
! TTTGATATCAGCTCTGGCGC+TGG + chr4.4:14278578-14278597 MS.gene049885:intron 50.0%
!! ACTGGTTGGCCATCTTTTGG+TGG + chr4.4:14275911-14275930 MS.gene049885:CDS 50.0%
!! AGGGAAGCATTGGCCTTCAA+TGG - chr4.4:14277964-14277983 None:intergenic 50.0%
ACCGGAAGTGGAAACTCCAC+GGG + chr4.4:14276175-14276194 MS.gene049885:CDS 55.0%
AGCTGCAAAATGGCCTGAGC+TGG + chr4.4:14276236-14276255 MS.gene049885:CDS 55.0%
CACCGGAAGTGGAAACTCCA+CGG + chr4.4:14276174-14276193 MS.gene049885:CDS 55.0%
CAGCGGGTCCTGAATGATTC+TGG + chr4.4:14275992-14276011 MS.gene049885:CDS 55.0%
CCAACAAGGTGGTCCACAGT+GGG - chr4.4:14278238-14278257 None:intergenic 55.0%
GCTGCAAAATGGCCTGAGCT+GGG + chr4.4:14276237-14276256 MS.gene049885:CDS 55.0%
GTGGCAGTAGAAGGCGGAAA+AGG - chr4.4:14275608-14275627 None:intergenic 55.0%
TCCCGTGGAGTTTCCACTTC+CGG - chr4.4:14276179-14276198 None:intergenic 55.0%
! GAAGAAGGTCCAAGTGCCGT+AGG - chr4.4:14278620-14278639 None:intergenic 55.0%
!! GGTTGGTGTCACCAATGAGG+AGG + chr4.4:14275340-14275359 MS.gene049885:CDS 55.0%
AATGGCCTGAGCTGGGCTTG+TGG + chr4.4:14276244-14276263 MS.gene049885:CDS 60.0%
AGCTGGGCTTGTGGACAAGG+TGG + chr4.4:14276253-14276272 MS.gene049885:CDS 60.0%
ATCCAAGCTGCGGCTGCTGA+TGG - chr4.4:14275386-14275405 None:intergenic 60.0%
ATGCCTAGGCCATGCGCATC+AGG - chr4.4:14277658-14277677 None:intergenic 60.0%
CCCACTGTGGACCACCTTGT+TGG + chr4.4:14278235-14278254 MS.gene049885:intron 60.0%
CTGAGCTGGGCTTGTGGACA+AGG + chr4.4:14276250-14276269 MS.gene049885:CDS 60.0%
CTTGTCCACAAGCCCAGCTC+AGG - chr4.4:14276252-14276271 None:intergenic 60.0%
GATCCTGATGCGCATGGCCT+AGG + chr4.4:14277652-14277671 MS.gene049885:intron 60.0%
GCCAACAAGGTGGTCCACAG+TGG - chr4.4:14278239-14278258 None:intergenic 60.0%
GCCTCACGTGAGCACCCTTT+GGG + chr4.4:14276776-14276795 MS.gene049885:intron 60.0%
GGCAATAGCTGTTGGCAGCG+AGG + chr4.4:14275448-14275467 MS.gene049885:CDS 60.0%
GGTGCTTCTGGCCAGATCAC+CGG + chr4.4:14276157-14276176 MS.gene049885:CDS 60.0%
TCTGGCCAGATCACCGGAAG+TGG + chr4.4:14276163-14276182 MS.gene049885:CDS 60.0%
TGCCTCACGTGAGCACCCTT+TGG + chr4.4:14276775-14276794 MS.gene049885:intron 60.0%
! GAAGGTCCAAGTGCCGTAGG+AGG - chr4.4:14278617-14278636 None:intergenic 60.0%
! GATATCAGCTCTGGCGCTGG+AGG + chr4.4:14278581-14278600 MS.gene049885:intron 60.0%
CTCCATCAGCAGCCGCAGCT+TGG + chr4.4:14275381-14275400 MS.gene049885:CDS 65.0%
!! GCCCAAAGGGTGCTCACGTG+AGG - chr4.4:14276780-14276799 None:intergenic 65.0%


Chromosome Type Strat End Strand Name
chr4.4 gene 14274286 14278733 14274286 ID=MS.gene049885
chr4.4 mRNA 14274286 14278733 14274286 ID=MS.gene049885.t1;Parent=MS.gene049885
chr4.4 exon 14274286 14274352 14274286 ID=MS.gene049885.t1.exon1;Parent=MS.gene049885.t1
chr4.4 CDS 14274286 14274352 14274286 ID=cds.MS.gene049885.t1;Parent=MS.gene049885.t1
chr4.4 exon 14275180 14276436 14275180 ID=MS.gene049885.t1.exon2;Parent=MS.gene049885.t1
chr4.4 CDS 14275180 14276436 14275180 ID=cds.MS.gene049885.t1;Parent=MS.gene049885.t1
chr4.4 exon 14278456 14278483 14278456 ID=MS.gene049885.t1.exon3;Parent=MS.gene049885.t1
chr4.4 CDS 14278456 14278483 14278456 ID=cds.MS.gene049885.t1;Parent=MS.gene049885.t1
chr4.4 exon 14278589 14278733 14278589 ID=MS.gene049885.t1.exon4;Parent=MS.gene049885.t1
chr4.4 CDS 14278589 14278733 14278589 ID=cds.MS.gene049885.t1;Parent=MS.gene049885.t1
Gene Sequence

>MS.gene049885

ATGAAGCTTAAAAAATGGCTTGAAGGAGTTTTGTTGCTCACTACTGCTATGCTAACCTCTACATTGGGTAATATACATCTTCCTTTTAATTAAGCGGTTATCATTTAAGTGCTTATACATAAGCTGTTTCTATAACAAAAGATAAAATAAAGTCAAACTGTTTTCGTATAAACTATAAATTGTTTTCATTAGCTATCTTAGAGAGCTTATGGAAATAAACTAAAAACAACTTATAGATATGGCATAAACTGTTTAGGTAAGCTCTCTCAAACAGTTGCGCAAGTGCTTATGCTAGTAGATCAAGGGCCTGTTTGGATAAACAACTTATTTGGAGCTTATAGCACAAGCACTTATCATGATAAGTGCTATGCATAAGCTTACATAAGATATTTTTATAGAAAAGATAAAATAAAGTTAAATTGTTTTTGTATTTGTTATATGCTGTTTTTATAAGTTATATTGGAGAACTTATGAAAGTAAGCCGAAAAAAGCTTGTTAAAATTGTCATGAGCTGTTTTCACAAGTTCTCTCAAACAGTCTCACAAAACTTATGTTAGTAGATAAGCTCAAATAAGTCATTCTAAACAGGCCCCAATTCATTTTGCAATGGTTTTGTGAGAAATGATTTATTTTTTATGTTGCTAACTCCCAGTTAATATCACAAAATCTCGGATGCAAACCATTAGTCTCTTAAATTTGCATATGCACTCATTAACCATAGTTCATATTTTGTTTTCCTTTATTATTTTACTTGGCTTTATAGTTACAAGCAAGGTTTTTACTGTTAAAAGTACTGCTTGTCCTATTCACTGCAAATGCAAGCAATTTGGGGATGTAGATATATGATGGATAATTCATGGTCCATTACATTGAATGAACTTGTTGAATTTGTAGGTGCTTTTGTGGGGGTAAACATTGGCACCGATGTCTCTGATATGCCATCTGCTTCAAACGTGGTTGCTATTCTAAAAGCCAATCAAATTACTCACGTGCGTCTTTATGACGCCAATGCCCACTTACTACAAGCCCTTTCAAAAACCAATATTGACGTAATGGTTGGTGTCACCAATGAGGAGGTATTGAGAATCGGAGAGTCTCCATCAGCAGCCGCAGCTTGGATTAATAAAAATGTAGTTGCCTATGTACCGTCCACCAATATCACGGCAATAGCTGTTGGCAGCGAGGTTCTTTCCACAATCCCAAATGTTGCTCCCGTTCTTGTTCCTGCCATGAATTCTCTTCACAAAGCTCTGGTTGCTGCAAACCTTAACTTTCGTGTCAAGGTTTCGACTCCCCAATCTATGGATATTATCCCTAAGCCTTTTCCGCCTTCTACTGCCACCTTTAACTCTTCGTGGAACTCTACCCTCTACCAAGTCCTCCAGTTTTTGAGAAACACGAATTCCTCCTTCATGTTAAATGCCTATCCTTATTATGGATACACTAAAGGAGACGGCATTTTCCCTCTTGAATATGCTCTTTTCCGACCCCTTCCTTCAGTGAAACAAATTGTTGATCCAAACACACTATATCACTATAATAGTATGTTTGATGCAATGGTGGATGCTACCTATTACTCTATAGATGCCTTAAATTTCAAAGATATACCCGTTGTTGTCACAGAAACTGGTTGGCCATCTTTTGGTGGAGCAAATGAACCCGATGCTACTGCAGAAAATGCTGAGACCTACAATAATAATATGATTCAGCGGGTCCTGAATGATTCTGGTCCACCTAGTCAGCCAAATATACCCATTAATACCTACATATATGAACTGTTTAATGAAGACAAGAGGAATGGACCTGTATCCGAAAAAAACTGGGGCATCGTCTATACTAATGGAAGTGCCGTTTATCCTTTAAGTTATGGTGGTGCTTCTGGCCAGATCACCGGAAGTGGAAACTCCACGGGAATATTTTGTGTTGCTAAAGATGGAGCAGACACTGATAAGCTGCAAAATGGCCTGAGCTGGGCTTGTGGACAAGGTGGAGCAAACTGCGCTCCTATTCAACAAGGACAGCGATGCTATCTCCCCAATAATGTGAAAAGCCATGCCTCATATGCTTATAATGATTATTATCAGAAAAATCAAGGTGTTGGTGGAACTTGTGACTTTGATGGTACTGCCGAAATCACTTCCAAGGATCCAAGTAAGTTGATACGAATTCTTACTTTTGTTTTATTGGATTTGGATTTGATGTGGTCAAAATTTCACATTTACGCAGTGAACACATAGGTGACCGTAGAATTAAGAGTGGACGCTCTAGATTTTTAGTTCAGTATTTTAGAGTTTAGAGTTTAAAAAAAATCTACTTGTTGTCTGCAAACGTCCAATTGTGATCCAAATCCCATGTGAATGCGTGACCTCAACAAATCCAAATCCCATGTTATTTCTTTAGATGGTCACATATGTGTAACTGCGTTCCTTTTATATTGAACATGCCATCGGCTAACTATCCAAAAAGCCTACGCTGTTGGGTGAAAACACTGCCTCACGTGAGCACCCTTTGGGCTTGAAGCGTATGCAATGCTCAAGCCCACCCAATCTTGTGCTAACATTTAACATTTTTACTTAGAGTGGGGGCAATGATAATTGAACTCTAGAATATATGATTATAGCAACACTGATGCCATCTCATGAACCACTTTGTTGAATTATAATGACCCTATTTCAAGTATAGGTCCTGTTTTGTTTACTAGTACTCCCTCCGGTCCTATTTACAAGAGAAATTTGAGTCAACAAAAGTTGATGTATCTAGTTAAAAATTTAGTCTAGATACATCAACTTTTGTTGACCCAATTTTTTCTTATAAATAAGACCGGAGGGAGTATTAGCTTTGCTCCTTAGGATATTCAAATACATGGAAGGTACTTCCCTCATTTTTCCAATCATCATATAATAAATATTTATAGCTGAATCTAGTTTCATTGATTGATAATATTGAACCGGAGTTATAATGTCATTGTGTCACTCTTCAATTATCTATTAATTTGTCTAGAAGAAATTGCCCAGATCCTAGATGGTTGCGTGAGTATTAGTATTAATGTTGTTTGGATGCATCTCATGCATTCTTGCTGATTCTATAGGTCTAGTCTCCTCGTAAATCTGTATTAGAGTATGTTTGGATGGAGGATTTTGAAAGGAAGGGTACGGCAGGGTTTATTTTCTTTTCTAAGTCAAGGAAGTTGCAAGATGCTTCTAAAAATAAATTATGTGTGGTTGAAATATTATACAATCATCTATCATGTTATTCTTTCTTTCAAATTTTTTTTAAGATTGTAATTATACCAAACATATTGTTAGTGGCATACTGACGTCAGTTTCATGAGGCATTTTTTTAGATTTGGGAATGTTGTATTTTTGTGATCCTGATGCGCATGGCCTAGGCATTAAACTTATTGAAACTTCACATAACTATGCTATTAGAAATGTCTTCTTATGGCATCCTGGAACTGATTGCATTATTCTGAAATTATTGGTGGGGGGTGAATTCTGTCTTATTAAAATTTCATGACTTTTTTAAGTTAAAACCGTGTCTATTTCTCTTTTCAAAGACATCAAATAATTTGCCAGTATTTTTGAAGAGAGACATGAAATTTATCGTGACAAGATAACTGGGTTCTACAGTTGACCACTTTGATAAATGGTCTATGGTGGATTAGCTCATAAAATACCATTGAAGGCCAATGCTTCCCTTTGTAAGCAGAAGCTCACGGTCATTCTTGTTCTAAAGACTAATGAGTGAGATTGTGACCTGATGAGTGTTGGTTCGACAAACACAAGGGTAAACAAATGAGTTGAATTTTGATACACTCACGTTTGTTTTCCCTAATTTTTTTTTTTCAAACTAGTACTTATCAGGTCACCACCTTACTCATTATGATGTGGAAGACCTTGAGCTTTTACATGAGTCGTCTTTGGAGTTTCGAGTGATTTTCAAGTATTTACCCACTGTGGACCACCTTGTTGGCATGACAAGATATACTGTAAAAATTTGTCATAAAAAGATTCTCTCCAATGGTAGCCAACTTTTTCAACAATGTATCTTATAAATTTGTGTGAACAAGTAAATGATATTTTAAGTCTCTATGTTCCATTAAAAGTTTATAATCACTTGAATGTTTCCTTGCGAGCATTTAACCATTTAATACTGCATAAATTGTTTCAGGTTATGGATCATGTAGATTCACGGGAAGGTATACAATCTTATCTCAATCTATACACATCCATGATTAATTAAATTTAGAACTAATTGTTTCTCTTTAAAATTCTTATCTGATCATGGGTTATTTTGATATCAGCTCTGGCGCTGGAGGAGTGAGTTTACCTCCTACGGCACTTGGACCTTCTTCAAGTCCCTTTGGAGCAAGTGTGAACCTGCAAGTGTCTACCCTTCAGTATATGATTTCTGCTATTGGTGTATTTTTTGCTCTGATGATTCTTTGA
Protein sequence

>MS.gene049885.t1

MKLKKWLEGVLLLTTAMLTSTLGAFVGVNIGTDVSDMPSASNVVAILKANQITHVRLYDANAHLLQALSKTNIDVMVGVTNEEVLRIGESPSAAAAWINKNVVAYVPSTNITAIAVGSEVLSTIPNVAPVLVPAMNSLHKALVAANLNFRVKVSTPQSMDIIPKPFPPSTATFNSSWNSTLYQVLQFLRNTNSSFMLNAYPYYGYTKGDGIFPLEYALFRPLPSVKQIVDPNTLYHYNSMFDAMVDATYYSIDALNFKDIPVVVTETGWPSFGGANEPDATAENAETYNNNMIQRVLNDSGPPSQPNIPINTYIYELFNEDKRNGPVSEKNWGIVYTNGSAVYPLSYGGASGQITGSGNSTGIFCVAKDGADTDKLQNGLSWACGQGGANCAPIQQGQRCYLPNNVKSHASYAYNDYYQKNQGVGGTCDFDGTAEITSKDPSYGSCRFTGSSGAGGVSLPPTALGPSSSPFGASVNLQVSTLQYMISAIGVFFALMIL