AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene009069

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene009069.t1 MTR_8g065030 99.134 462 3 1 1 462 1 461 0.0 936
MS.gene009069.t1 MTR_7g091850 46.739 368 193 3 64 429 75 441 3.28e-117 351
MS.gene009069.t1 MTR_1g052315 46.049 367 194 4 66 430 65 429 7.75e-116 347
MS.gene009069.t1 MTR_2g103410 45.550 382 206 2 64 443 58 439 1.12e-115 347
MS.gene009069.t1 MTR_2g060350 44.324 370 199 6 64 429 73 439 5.07e-109 330
MS.gene009069.t1 MTR_6g005630 42.416 389 215 5 54 441 34 414 2.78e-107 325
MS.gene009069.t1 MTR_3g030540 44.533 375 194 4 41 409 46 412 2.69e-103 315
MS.gene009069.t1 MTR_4g094715 40.355 394 222 6 64 446 64 455 3.35e-101 310
MS.gene009069.t1 MTR_1g086390 39.901 406 222 8 64 456 80 476 5.99e-101 310
MS.gene009069.t1 MTR_7g110050 40.470 383 214 7 64 434 66 446 4.26e-99 305
MS.gene009069.t1 MTR_7g091840 45.714 315 167 3 64 375 64 377 2.68e-96 295
MS.gene009069.t1 MTR_5g034090 40.369 379 196 6 64 415 120 495 1.88e-93 293
MS.gene009069.t1 MTR_6g005630 39.846 389 202 7 54 441 34 391 3.54e-93 288
MS.gene009069.t1 MTR_8g065010 38.499 413 220 7 53 434 95 504 1.19e-92 290
MS.gene009069.t1 MTR_2g032710 40.204 393 222 6 53 434 55 445 4.54e-91 284
MS.gene009069.t1 MTR_5g033680 33.408 446 273 6 1 436 7 438 3.93e-87 274
MS.gene009069.t1 MTR_2g103650 39.118 363 213 5 66 421 29 390 2.08e-86 270
MS.gene009069.t1 MTR_3g084380 40.230 348 193 6 69 410 25 363 5.36e-86 269
MS.gene009069.t1 MTR_7g113910 45.031 322 142 5 125 443 74 363 1.51e-85 267
MS.gene009069.t1 MTR_4g083660 40.053 377 206 11 66 434 10 374 7.91e-83 260
MS.gene009069.t1 MTR_8g009810 39.474 380 221 7 54 430 24 397 3.39e-82 259
MS.gene009069.t1 MTR_3g438050 37.666 377 222 7 64 434 26 395 2.07e-80 254
MS.gene009069.t1 MTR_4g084050 37.173 382 216 9 66 434 24 394 9.11e-79 250
MS.gene009069.t1 MTR_6g028080 35.450 378 224 10 66 434 31 397 2.17e-78 249
MS.gene009069.t1 MTR_2g049400 38.606 373 217 10 65 434 28 391 5.16e-78 248
MS.gene009069.t1 MTR_3g084360 35.635 362 219 7 66 421 25 378 4.67e-76 243
MS.gene009069.t1 MTR_3g054320 35.979 378 223 7 69 440 34 398 2.33e-75 242
MS.gene009069.t1 MTR_2g103410 46.538 260 138 1 64 322 58 317 2.44e-75 239
MS.gene009069.t1 MTR_5g043350 36.716 335 200 5 66 395 30 357 1.25e-74 240
MS.gene009069.t1 MTR_2g435640 38.746 351 204 7 61 405 49 394 2.55e-74 239
MS.gene009069.t1 MTR_0157s0060 36.997 373 212 7 70 434 3 360 3.60e-74 238
MS.gene009069.t1 MTR_4g034020 36.997 373 212 7 70 434 3 360 3.60e-74 238
MS.gene009069.t1 MTR_8g030930 34.127 378 228 8 64 429 26 394 1.20e-71 232
MS.gene009069.t1 MTR_8g010070 34.656 378 221 11 64 434 30 388 2.29e-69 226
MS.gene009069.t1 MTR_2g029170 38.261 345 194 11 97 434 29 361 1.19e-67 220
MS.gene009069.t1 MTR_4g120320 35.013 377 231 9 61 429 48 418 3.95e-67 221
MS.gene009069.t1 MTR_8g010090 34.043 376 225 9 64 434 30 387 6.00e-67 219
MS.gene009069.t1 MTR_1g088160 35.620 379 225 10 64 431 34 404 6.92e-67 220
MS.gene009069.t1 MTR_8g010040 36.461 373 214 9 66 433 33 387 1.35e-66 218
MS.gene009069.t1 MTR_8g010110 33.862 378 227 8 64 436 30 389 2.52e-66 218
MS.gene009069.t1 MTR_5g034090 40.210 286 143 4 64 322 120 404 2.64e-66 219
MS.gene009069.t1 MTR_1g012390 34.921 378 228 10 66 435 29 396 9.82e-66 216
MS.gene009069.t1 MTR_2g058840 34.986 363 215 7 64 416 24 375 3.19e-64 213
MS.gene009069.t1 MTR_2g058640 36.364 352 209 7 63 406 23 367 4.95e-64 213
MS.gene009069.t1 MTR_2g058670 35.068 365 214 8 64 416 24 377 1.13e-63 212
MS.gene009069.t1 MTR_8g010080 32.353 374 233 7 64 434 30 386 2.09e-63 210
MS.gene009069.t1 MTR_1g013740 31.105 389 236 10 54 435 26 389 1.64e-61 205
MS.gene009069.t1 MTR_8g008765 34.650 329 196 5 64 389 30 342 7.93e-61 202
MS.gene009069.t1 MTR_7g035415 40.136 294 158 6 64 351 39 320 1.85e-60 201
MS.gene009069.t1 MTR_5g063430 34.551 301 181 6 64 359 24 313 1.26e-58 195
MS.gene009069.t1 MTR_1g013730 30.412 388 238 10 54 434 18 380 5.83e-58 196
MS.gene009069.t1 MTR_5g097860 35.494 324 198 8 64 382 24 341 2.25e-55 188
MS.gene009069.t1 MTR_8g010050 30.952 378 201 12 64 434 30 354 1.98e-53 183
MS.gene009069.t1 MTR_8g077320 37.417 302 144 7 64 351 32 302 5.49e-53 182
MS.gene009069.t1 MTR_8g008700 34.201 269 159 4 123 389 13 265 3.79e-46 162
MS.gene009069.t1 MTR_8g031180 39.423 208 117 3 208 409 73 277 1.37e-41 149
MS.gene009069.t1 MTR_2g100040 30.423 355 188 10 56 404 16 317 3.81e-40 148
MS.gene009069.t1 MTR_4g124980 25.806 434 269 15 63 456 72 492 4.52e-28 116
MS.gene009069.t1 MTR_2g042740 24.832 447 283 16 47 456 42 472 1.00e-25 109
MS.gene009069.t1 MTR_7g110710 29.679 374 218 14 65 405 43 404 1.52e-24 106
MS.gene009069.t1 MTR_7g110710 29.679 374 218 14 65 405 43 404 1.97e-24 105
MS.gene009069.t1 MTR_4g120730 24.872 390 251 14 65 422 40 419 4.20e-23 102
MS.gene009069.t1 MTR_1g086030 29.240 342 205 12 65 377 82 415 2.35e-22 100
MS.gene009069.t1 MTR_1g100040 26.943 386 240 13 51 406 45 418 2.16e-21 97.1
MS.gene009069.t1 MTR_1g100060 26.804 388 238 14 51 406 82 455 3.17e-21 96.7
MS.gene009069.t1 MTR_2g435340 24.552 391 251 13 65 422 37 416 5.20e-21 95.5
MS.gene009069.t1 MTR_3g096330 25.250 400 250 13 62 426 73 458 1.21e-20 95.5
MS.gene009069.t1 MTR_1g100050 26.804 388 238 14 51 406 39 412 1.71e-20 94.4
MS.gene009069.t1 MTR_7g088550 26.287 369 230 13 70 406 55 413 5.35e-20 92.8
MS.gene009069.t1 MTR_8g098840 25.063 395 251 15 66 426 45 428 9.58e-20 92.0
MS.gene009069.t1 MTR_1g086030 28.522 291 175 10 115 377 26 311 9.32e-19 88.6
MS.gene009069.t1 MTR_5g090160 25.330 379 240 11 65 411 44 411 1.08e-18 88.6
MS.gene009069.t1 MTR_8g028725 25.000 416 263 13 65 444 55 457 1.43e-18 88.6
MS.gene009069.t1 MTR_7g078680 24.938 405 255 12 66 434 56 447 2.69e-18 87.4
MS.gene009069.t1 MTR_2g435340 25.260 289 197 8 152 427 74 356 3.72e-17 83.6
MS.gene009069.t1 MTR_1g099850 26.558 369 228 13 70 406 60 417 5.56e-17 83.6
MS.gene009069.t1 MTR_3g449590 23.545 378 247 12 65 411 47 413 5.08e-16 80.5
MS.gene009069.t1 MTR_8g007320 38.571 70 43 0 361 430 22 91 1.69e-11 60.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene009069.t1 AT1G23460 67.778 450 139 3 14 462 16 460 0.0 628
MS.gene009069.t1 AT1G23460 68.636 440 133 2 24 462 1 436 0.0 624
MS.gene009069.t1 AT1G70500 63.404 470 162 6 1 462 1 468 0.0 616
MS.gene009069.t1 AT1G80170 47.668 386 196 4 64 446 52 434 1.18e-125 372
MS.gene009069.t1 AT3G07970 46.667 345 179 4 66 408 72 413 3.01e-111 335
MS.gene009069.t1 AT3G57510 45.380 368 191 6 65 429 68 428 9.81e-109 329
MS.gene009069.t1 AT2G41850 46.196 368 188 5 65 429 68 428 4.34e-105 319
MS.gene009069.t1 AT4G01890 42.963 405 213 9 53 441 53 455 1.99e-104 319
MS.gene009069.t1 AT1G02460 41.645 389 209 8 64 436 88 474 4.19e-104 319
MS.gene009069.t1 AT1G56710 41.860 387 209 8 61 434 44 427 1.92e-102 313
MS.gene009069.t1 AT5G14650 40.150 401 226 7 57 453 43 433 8.18e-101 308
MS.gene009069.t1 AT1G48100 39.791 382 217 6 64 434 79 458 2.16e-98 303
MS.gene009069.t1 AT1G10640 39.604 404 211 7 61 434 115 515 2.88e-96 300
MS.gene009069.t1 AT3G26610 36.878 442 257 8 5 440 9 434 5.77e-92 287
MS.gene009069.t1 AT1G60590 37.965 403 214 7 66 435 124 523 1.26e-91 288
MS.gene009069.t1 AT3G15720 39.370 381 211 8 65 437 24 392 1.31e-88 278
MS.gene009069.t1 AT3G15720 39.370 381 211 8 65 437 23 391 1.39e-88 278
MS.gene009069.t1 AT3G15720 38.845 381 210 9 65 437 23 388 8.73e-86 270
MS.gene009069.t1 AT2G43890 38.814 371 217 8 66 434 30 392 1.53e-85 268
MS.gene009069.t1 AT4G35670 40.517 348 196 4 66 410 25 364 4.21e-85 267
MS.gene009069.t1 AT1G80170 48.077 260 134 1 64 322 52 311 1.42e-84 263
MS.gene009069.t1 AT2G43880 38.525 366 216 7 66 429 32 390 3.23e-83 262
MS.gene009069.t1 AT1G05660 36.800 375 226 9 64 435 27 393 8.39e-83 261
MS.gene009069.t1 AT1G05650 36.267 375 230 7 63 435 26 393 1.35e-81 258
MS.gene009069.t1 AT2G43870 40.160 376 205 12 66 434 22 384 1.38e-81 257
MS.gene009069.t1 AT1G65570 40.909 374 210 9 65 434 31 397 2.36e-81 257
MS.gene009069.t1 AT5G27530 36.979 384 207 4 64 444 52 403 3.62e-81 259
MS.gene009069.t1 AT3G59850 39.946 373 212 10 66 434 24 388 4.77e-81 256
MS.gene009069.t1 AT3G59850 39.946 373 212 10 66 434 68 432 1.21e-80 256
MS.gene009069.t1 AT5G44840 38.746 351 203 6 64 410 23 365 2.78e-78 249
MS.gene009069.t1 AT1G80140 38.279 337 190 7 101 429 6 332 4.71e-78 246
MS.gene009069.t1 AT3G15720 39.349 338 186 7 107 437 3 328 8.25e-77 245
MS.gene009069.t1 AT2G43860 38.503 374 218 10 65 434 33 398 5.62e-76 243
MS.gene009069.t1 AT1G17150 36.340 377 227 9 64 434 32 401 1.63e-73 237
MS.gene009069.t1 AT1G78400 35.092 379 230 8 61 431 31 401 1.91e-72 234
MS.gene009069.t1 AT2G15450 34.204 383 233 10 64 435 30 404 3.39e-72 234
MS.gene009069.t1 AT2G33160 36.554 383 222 9 60 430 27 400 1.01e-71 239
MS.gene009069.t1 AT2G15460 34.218 377 230 9 64 429 30 399 1.30e-71 232
MS.gene009069.t1 AT2G15470 33.943 383 234 10 64 435 30 404 1.24e-70 229
MS.gene009069.t1 AT1G43080 34.146 369 225 9 64 421 30 391 5.06e-70 228
MS.gene009069.t1 AT2G26620 34.211 380 235 8 64 435 30 402 5.51e-70 228
MS.gene009069.t1 AT4G18180 37.183 355 211 7 64 410 38 388 5.91e-70 228
MS.gene009069.t1 AT5G17200 34.959 369 206 7 60 405 34 391 8.08e-70 228
MS.gene009069.t1 AT1G43090 33.875 369 226 9 64 421 30 391 2.70e-69 227
MS.gene009069.t1 AT4G13760 33.333 384 235 11 64 435 30 404 2.16e-68 224
MS.gene009069.t1 AT1G43100 33.604 369 227 9 64 421 30 391 2.53e-68 225
MS.gene009069.t1 AT5G14650 41.199 267 152 3 57 322 43 305 9.65e-68 219
MS.gene009069.t1 AT5G44830 38.217 314 174 5 99 410 11 306 8.46e-67 217
MS.gene009069.t1 AT2G43880 39.597 298 171 7 66 361 32 322 1.60e-66 216
MS.gene009069.t1 AT1G02790 33.884 363 224 8 47 406 34 383 7.88e-66 218
MS.gene009069.t1 AT3G07840 34.383 381 239 7 66 441 22 396 1.01e-65 217
MS.gene009069.t1 AT2G40310 32.895 380 238 9 66 435 32 404 4.19e-65 215
MS.gene009069.t1 AT3G14040 35.171 381 236 8 56 431 62 436 1.08e-63 213
MS.gene009069.t1 AT4G32380 33.069 378 237 7 52 420 12 382 1.19e-63 213
MS.gene009069.t1 AT5G48140 34.593 344 213 6 78 416 34 370 1.35e-61 206
MS.gene009069.t1 AT3G07850 34.677 372 232 8 65 431 70 435 7.28e-61 205
MS.gene009069.t1 AT4G35670 39.245 265 153 2 146 410 1 257 2.27e-59 196
MS.gene009069.t1 AT3G07830 31.755 359 234 6 78 431 34 386 3.48e-59 199
MS.gene009069.t1 AT5G39910 30.504 377 198 6 64 435 35 352 1.05e-58 197
MS.gene009069.t1 AT4G32370 36.047 344 202 9 35 367 2 338 4.97e-57 192
MS.gene009069.t1 AT3G07820 31.476 359 235 6 63 416 18 370 1.25e-56 192
MS.gene009069.t1 AT4G32375 34.266 286 178 3 137 419 3 281 3.68e-54 187
MS.gene009069.t1 AT4G32380 34.713 314 191 7 52 360 12 316 3.27e-47 168
MS.gene009069.t1 AT3G62110 30.548 347 195 14 65 377 43 377 1.71e-26 112
MS.gene009069.t1 AT3G62110 30.548 347 195 14 65 377 43 377 1.71e-26 112
MS.gene009069.t1 AT2G23900 25.320 391 244 13 67 421 58 436 1.50e-24 106
MS.gene009069.t1 AT3G42950 24.766 428 268 16 63 454 64 473 9.25e-23 101
MS.gene009069.t1 AT4G23820 27.692 390 237 15 65 421 41 418 4.57e-22 98.6
MS.gene009069.t1 AT5G41870 27.895 380 219 14 64 405 44 406 6.27e-22 98.6
MS.gene009069.t1 AT1G19170 23.810 420 269 14 45 429 72 475 1.00e-21 98.2
MS.gene009069.t1 AT3G48950 24.661 369 234 10 70 405 50 407 2.17e-21 97.1
MS.gene009069.t1 AT5G49215 24.495 396 258 12 44 409 22 406 7.76e-21 95.1
MS.gene009069.t1 AT5G49215 24.495 396 258 12 44 409 24 408 1.12e-20 94.7
MS.gene009069.t1 AT4G33440 25.505 396 254 12 62 426 69 454 3.80e-20 93.2
MS.gene009069.t1 AT4G23500 25.310 403 256 13 66 434 69 460 7.48e-20 92.4
MS.gene009069.t1 AT3G06770 25.469 373 231 12 65 403 44 403 6.76e-19 89.4
MS.gene009069.t1 AT3G06770 25.469 373 231 12 65 403 43 402 7.23e-19 89.4
MS.gene009069.t1 AT3G61490 23.664 393 259 13 66 426 46 429 2.85e-16 81.3
MS.gene009069.t1 AT3G61490 23.664 393 259 13 66 426 46 429 2.85e-16 81.3
MS.gene009069.t1 AT3G61490 23.664 393 259 13 66 426 46 429 2.85e-16 81.3
MS.gene009069.t1 AT3G61490 24.054 370 242 12 66 405 61 421 3.02e-16 81.3
MS.gene009069.t1 AT3G16850 22.506 391 257 12 65 422 40 417 5.03e-16 80.5
MS.gene009069.t1 AT3G61490 24.054 370 242 12 66 405 159 519 6.74e-16 80.5
MS.gene009069.t1 AT3G06770 24.601 313 195 9 122 403 31 333 2.11e-15 78.2
MS.gene009069.t1 AT3G06770 24.601 313 195 9 122 403 31 333 2.11e-15 78.2
MS.gene009069.t1 AT3G06770 24.585 301 186 9 134 403 25 315 1.14e-13 72.8

Find 93 sgRNAs with CRISPR-Local

Find 185 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AATGCATCTGTTGGCTATTC+TGG 0.169467 8.2:-36632602 None:intergenic
GGAATCAATAGAACAGATTT+TGG 0.199017 8.2:-36631981 None:intergenic
ATGATGTGCGACAACAATTT+TGG 0.212569 8.2:+36631635 MS.gene009069:CDS
AGCCAAACGCGTGGAAGTTT+TGG 0.227777 8.2:-36632201 None:intergenic
TGCCATTCAGCTCAAGGATT+TGG 0.250772 8.2:+36635017 MS.gene009069:CDS
TTGTAGTCCCACTTACATTT+TGG 0.252854 8.2:-36634887 None:intergenic
TGTAGTCACGAAAGTGATTT+TGG 0.253475 8.2:+36633992 MS.gene009069:CDS
GTCACTGCAGTCAAATTTAA+TGG 0.268057 8.2:-36634922 None:intergenic
ACAAGATAACGGCGTCCTTT+TGG 0.268283 8.2:-36632002 None:intergenic
AAATATGGACAGATTCTTCT+TGG 0.276621 8.2:+36631565 None:intergenic
GTTAATGCAACGAAATTCAT+AGG 0.277359 8.2:+36632023 MS.gene009069:CDS
ATAGTGGCGAATGGAGTTTC+AGG 0.295850 8.2:+36631608 MS.gene009069:CDS
CTTCTTCCAGTCATCAGCTT+TGG 0.299691 8.2:+36634845 MS.gene009069:intron
AGTTCATCTATAAAGGTTAA+AGG 0.314242 8.2:+36632570 MS.gene009069:CDS
ATTGTCCAAGACTGCAAAAT+TGG 0.318689 8.2:+36632732 MS.gene009069:CDS
ATATGAATTCCATCAGTGTT+TGG 0.320024 8.2:-36632690 None:intergenic
AGTCCTTAGCAATGTTGATT+TGG 0.335788 8.2:+36634965 MS.gene009069:CDS
TCAGCTCAAGGATTTGGATA+TGG 0.367389 8.2:+36635023 MS.gene009069:CDS
CGATACAAGTTCATCTATAA+AGG 0.367696 8.2:+36632563 MS.gene009069:CDS
GTGGACCAGGACATGGAATC+AGG 0.368153 8.2:+36633171 MS.gene009069:CDS
TCCCAGTTCTTAGGATCTTC+CGG 0.369647 8.2:-36632177 None:intergenic
GGAGGTGCTGGATATGTTAA+AGG 0.370065 8.2:+36634554 MS.gene009069:CDS
AACTTTCTGACATACCTTCA+TGG 0.370106 8.2:+36631711 MS.gene009069:CDS
ATCCAAAACTTCCACGCGTT+TGG 0.373107 8.2:+36632199 MS.gene009069:CDS
TTTGCATTTCTCCAGATTGA+TGG 0.378623 8.2:+36632141 MS.gene009069:intron
TTCTTCTTGGTTTCTTTACT+CGG 0.379428 8.2:+36631578 MS.gene009069:CDS
TATGAATTCCATCAGTGTTT+GGG 0.383269 8.2:-36632689 None:intergenic
AGCTTTGGTGCTGCAGGAAA+TGG 0.388430 8.2:+36631773 MS.gene009069:CDS
TTTACTCGGTTTGCTTATAG+TGG 0.390214 8.2:+36631592 MS.gene009069:CDS
TAAAATTGATCTATAAGAAT+GGG 0.393440 8.2:-36634617 None:intergenic
GCAGTCAAATTTAATGGCCT+TGG 0.403608 8.2:-36634916 None:intergenic
CTCCGGAAGATCCTAAGAAC+TGG 0.407663 8.2:+36632175 MS.gene009069:CDS
TCAGTGTTTGGGCTGTCTCC+TGG 0.409156 8.2:-36632678 None:intergenic
CAAGGCTCTGGAGTTATTGA+CGG 0.420399 8.2:+36632255 MS.gene009069:CDS
TTGGATACAGCACTTCTAAA+GGG 0.432719 8.2:+36634011 MS.gene009069:CDS
TTGACGGCTCAGGAAGTAAA+TGG 0.432957 8.2:+36632271 MS.gene009069:CDS
CTTGGTAAAGATAACTCAAC+TGG 0.447181 8.2:+36633969 MS.gene009069:CDS
TTTGGATACAGCACTTCTAA+AGG 0.453983 8.2:+36634010 MS.gene009069:CDS
CTTGTGAATATAGATAGCTT+TGG 0.454173 8.2:+36631758 MS.gene009069:CDS
GTAAAATTGATCTATAAGAA+TGG 0.463416 8.2:-36634618 None:intergenic
CAAGACTGCAAAATTGGAAC+AGG 0.468126 8.2:+36632738 MS.gene009069:CDS
ATAGATAGCTTTGGTGCTGC+AGG 0.470470 8.2:+36631767 MS.gene009069:CDS
TGATGGAACACTGGTTGCTC+CGG 0.475544 8.2:+36632158 MS.gene009069:CDS
TAACTATAGTTCTGTGTGAC+GGG 0.476817 8.2:-36635141 None:intergenic
TCTGTTCTATTGATTCCAAA+AGG 0.478099 8.2:+36631987 MS.gene009069:CDS
ACCGTTGGTGCACCTTTGCA+AGG 0.479936 8.2:-36632442 None:intergenic
GAGGTGCTGGATATGTTAAA+GGG 0.497893 8.2:+36634555 MS.gene009069:CDS
TATAGATGAACTTGTATCGA+TGG 0.501752 8.2:-36632559 None:intergenic
ATCCAAATCCTTGAGCTGAA+TGG 0.502123 8.2:-36635019 None:intergenic
ATGATTAGATTGTCTTTACA+AGG 0.505103 8.2:-36632047 None:intergenic
AGTCTTAATTCTAAGACCAT+TGG 0.510878 8.2:-36634039 None:intergenic
TCGTTGCATTAACAAGATAA+CGG 0.516410 8.2:-36632013 None:intergenic
GGAGTTAAAGTGGCTTCACC+AGG 0.522566 8.2:+36632660 MS.gene009069:CDS
CCGCGTTCGCTTGTCCATGA+AGG 0.523462 8.2:-36631725 None:intergenic
ACATATTGCCATTCAGCTCA+AGG 0.523769 8.2:+36635011 MS.gene009069:CDS
CATGTCATGTAGGGAGGTGC+TGG 0.523870 8.2:+36634542 MS.gene009069:intron
TAAAGACAATCTAATCATCC+AGG 0.530090 8.2:+36632052 MS.gene009069:CDS
TTAATGCAACGAAATTCATA+GGG 0.535160 8.2:+36632024 MS.gene009069:CDS
TCTTAGAATTAAGACTTGGC+AGG 0.540406 8.2:+36634046 MS.gene009069:CDS
TCTCCAAATCAACATTGCTA+AGG 0.541315 8.2:-36634968 None:intergenic
GTTGATTTGGAGAAACAAGA+TGG 0.543075 8.2:+36634978 MS.gene009069:CDS
ATATCGTAAAATGCATCTGT+TGG 0.547197 8.2:-36632611 None:intergenic
TGATACCTGATTCCATGTCC+TGG 0.547348 8.2:-36633176 None:intergenic
GAATTAAGGCATTCAGCTGA+AGG 0.547826 8.2:-36635056 None:intergenic
ATAATGTACCAAAATGTAAG+TGG 0.551720 8.2:+36634879 MS.gene009069:CDS
CGTCAATAACTCCAGAGCCT+TGG 0.555802 8.2:-36632254 None:intergenic
TCTCCAGATTGATGGAACAC+TGG 0.557615 8.2:+36632149 MS.gene009069:intron
TTAACTATAGTTCTGTGTGA+CGG 0.558669 8.2:-36635142 None:intergenic
TGACACAGAGGAAGATTATG+AGG 0.559293 8.2:+36631682 MS.gene009069:CDS
CTTCTAAAGGGGACTACCAA+TGG 0.563594 8.2:+36634023 MS.gene009069:CDS
TCTGGAGTTATTGACGGCTC+AGG 0.564729 8.2:+36632261 MS.gene009069:CDS
GGAGACAGCCCAAACACTGA+TGG 0.574863 8.2:+36632681 MS.gene009069:CDS
TGGATACAGCACTTCTAAAG+GGG 0.580220 8.2:+36634012 MS.gene009069:CDS
CATAATCTTCCTCTGTGTCA+AGG 0.592302 8.2:-36631679 None:intergenic
GGTTTGCTTATAGTGGCGAA+TGG 0.593921 8.2:+36631599 MS.gene009069:CDS
GCCTTGCAAAGGTGCACCAA+CGG 0.604733 8.2:+36632441 MS.gene009069:intron
TCCGGAAGATCCTAAGAACT+GGG 0.607519 8.2:+36632176 MS.gene009069:CDS
CTAAGGACTAAGTTGCTGCA+TGG 0.619838 8.2:-36634951 None:intergenic
AAAATTGATCTATAAGAATG+GGG 0.621737 8.2:-36634616 None:intergenic
CGGCTCAGGAAGTAAATGGT+GGG 0.625021 8.2:+36632275 MS.gene009069:CDS
ATGGTCTTAGAATTAAGACT+TGG 0.628616 8.2:+36634042 MS.gene009069:CDS
GGGTACGCTTTCAGAATGTG+AGG 0.631944 8.2:+36634576 MS.gene009069:CDS
ACGGCTCAGGAAGTAAATGG+TGG 0.633961 8.2:+36632274 MS.gene009069:CDS
CCTTCATGGACAAGCGAACG+CGG 0.635643 8.2:+36631725 MS.gene009069:CDS
TAATGTACCAAAATGTAAGT+GGG 0.636159 8.2:+36634880 MS.gene009069:CDS
TCCAACCTCATGTCAAAACC+AGG 0.643988 8.2:+36634649 MS.gene009069:CDS
TGGAGAAACTGATGATACTG+AGG 0.647771 8.2:+36631793 MS.gene009069:CDS
TGGGACTACAAATAGTGCCA+AGG 0.654414 8.2:+36634899 MS.gene009069:CDS
ACGCTTTCAGAATGTGAGGG+TGG 0.678654 8.2:+36634580 MS.gene009069:CDS
ACTCAACAACCTTGACACAG+AGG 0.681814 8.2:+36631670 MS.gene009069:CDS
GGTACGCTTTCAGAATGTGA+GGG 0.685332 8.2:+36634577 MS.gene009069:CDS
AGGTGCTGGATATGTTAAAG+GGG 0.703846 8.2:+36634556 MS.gene009069:CDS
TCATGGACAAGCGAACGCGG+CGG 0.737434 8.2:+36631728 MS.gene009069:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TCATTTAAAATCATATAAAA+TGG + chr8.2:36633048-36633067 MS.gene009069:intron 10.0%
!! AAAATAAATTTATATTGCAC+TGG + chr8.2:36633871-36633890 MS.gene009069:intron 15.0%
!! TAAAAATAAACTTATATTGC+AGG + chr8.2:36632371-36632390 MS.gene009069:intron 15.0%
!! TAAAATATAGAATACAACAA+TGG - chr8.2:36632486-36632505 None:intergenic 15.0%
!! TAAAATTGATCTATAAGAAT+GGG - chr8.2:36634620-36634639 None:intergenic 15.0%
!! TAATCAAATTAAACATATTC+AGG + chr8.2:36633699-36633718 MS.gene009069:intron 15.0%
!! TACAAGTTAAATATTAATGT+AGG - chr8.2:36634812-36634831 None:intergenic 15.0%
!! TATGCTTGATTAATTAATTA+TGG + chr8.2:36634754-36634773 MS.gene009069:intron 15.0%
!!! ATTGATCAATTCTTATTTAT+AGG + chr8.2:36631923-36631942 MS.gene009069:intron 15.0%
!!! GTAAAATTTTTCAGAATATT+TGG + chr8.2:36632327-36632346 MS.gene009069:intron 15.0%
!! AAAATTGATCTATAAGAATG+GGG - chr8.2:36634619-36634638 None:intergenic 20.0%
!! AATAACTACTTTACCTAATA+TGG - chr8.2:36633907-36633926 None:intergenic 20.0%
!! ATGTTGAACATAGAAAAAAT+AGG - chr8.2:36631848-36631867 None:intergenic 20.0%
!! GAATAAAGTTTATGTTAGTT+AGG - chr8.2:36634297-36634316 None:intergenic 20.0%
!! GTAAAATTGATCTATAAGAA+TGG - chr8.2:36634621-36634640 None:intergenic 20.0%
!! TCTAGAAAGATAAAAAAAGT+GGG - chr8.2:36633766-36633785 None:intergenic 20.0%
!! TTAAAATAATGTTATGTGTG+TGG - chr8.2:36633806-36633825 None:intergenic 20.0%
!! TTTAGTTATTTGAATTTCAG+AGG - chr8.2:36633492-36633511 None:intergenic 20.0%
!! TTTCAAACATGCATTTATTA+AGG - chr8.2:36632807-36632826 None:intergenic 20.0%
!!! AAAATGAAGAGAATTTTTTG+TGG + chr8.2:36633152-36633171 MS.gene009069:CDS 20.0%
!!! ATTGATTTTGTACTAAATTG+AGG - chr8.2:36633215-36633234 None:intergenic 20.0%
!!! CACACATAACATTATTTTAA+TGG + chr8.2:36633806-36633825 MS.gene009069:intron 20.0%
!!! TACTTTTTTTTTTACAGCAT+TGG + chr8.2:36633942-36633961 MS.gene009069:intron 20.0%
!!! TATAACTTTTACCAAAATCA+CGG + chr8.2:36632863-36632882 MS.gene009069:intron 20.0%
!!! TTAAATTTTAGTTGCATGTT+TGG - chr8.2:36632924-36632943 None:intergenic 20.0%
!!! TTCTAGAAAGATAAAAAAAG+TGG - chr8.2:36633767-36633786 None:intergenic 20.0%
!!! TTGATTTTGTACTAAATTGA+GGG - chr8.2:36633214-36633233 None:intergenic 20.0%
! AGTTCATCTATAAAGGTTAA+AGG + chr8.2:36632570-36632589 MS.gene009069:CDS 25.0%
! ATAATGTACCAAAATGTAAG+TGG + chr8.2:36634879-36634898 MS.gene009069:CDS 25.0%
! ATGATTAGATTGTCTTTACA+AGG - chr8.2:36632050-36632069 None:intergenic 25.0%
! TAACTGTGCTATATTATTCA+GGG + chr8.2:36633090-36633109 MS.gene009069:intron 25.0%
! TAATGTACCAAAATGTAAGT+GGG + chr8.2:36634880-36634899 MS.gene009069:CDS 25.0%
! TAGTTTAACTATGAGTTTAG+TGG + chr8.2:36634339-36634358 MS.gene009069:intron 25.0%
! TCAATTTACATTATCACAAG+TGG - chr8.2:36633364-36633383 None:intergenic 25.0%
! TTAATGCAACGAAATTCATA+GGG + chr8.2:36632024-36632043 MS.gene009069:CDS 25.0%
! TTTATGTTAGTTAGGTTCAT+GGG - chr8.2:36634289-36634308 None:intergenic 25.0%
!! GTTTAAAATTAGAGTGCTTA+TGG + chr8.2:36633254-36633273 MS.gene009069:intron 25.0%
!! TAGGATAAAATTTGCTTGAT+TGG - chr8.2:36634793-36634812 None:intergenic 25.0%
!! TGATTTTGTACTAAATTGAG+GGG - chr8.2:36633213-36633232 None:intergenic 25.0%
!! TTTTGGTAAAAGTTATACGT+TGG - chr8.2:36632860-36632879 None:intergenic 25.0%
!!! AAATGTAGTTTTAACTCTGA+AGG + chr8.2:36632515-36632534 MS.gene009069:intron 25.0%
!!! AAGTTTTATCACTGGAATTA+AGG - chr8.2:36635073-36635092 None:intergenic 25.0%
!!! AATGTAGTTTTAACTCTGAA+GGG + chr8.2:36632516-36632535 MS.gene009069:intron 25.0%
AACTGTGCTATATTATTCAG+GGG + chr8.2:36633091-36633110 MS.gene009069:intron 30.0%
AATAACGTGAGTTACATTAC+CGG + chr8.2:36634180-36634199 MS.gene009069:intron 30.0%
AGACACAAAAATTTCATGAG+TGG - chr8.2:36633307-36633326 None:intergenic 30.0%
ATATCGTAAAATGCATCTGT+TGG - chr8.2:36632614-36632633 None:intergenic 30.0%
ATATGAATTCCATCAGTGTT+TGG - chr8.2:36632693-36632712 None:intergenic 30.0%
ATCACAAGTGGCATATATAA+AGG - chr8.2:36633352-36633371 None:intergenic 30.0%
ATGTTTATGATTGAGTAGTG+TGG + chr8.2:36632780-36632799 MS.gene009069:intron 30.0%
ATTTATATTGCACTGGAAAG+TGG + chr8.2:36633878-36633897 MS.gene009069:intron 30.0%
CACTTACATTTCAGAACTAT+GGG + chr8.2:36634433-36634452 MS.gene009069:intron 30.0%
CATCATTACAATTACTGACA+TGG + chr8.2:36632116-36632135 MS.gene009069:intron 30.0%
CGATACAAGTTCATCTATAA+AGG + chr8.2:36632563-36632582 MS.gene009069:CDS 30.0%
CTAACTGTGCTATATTATTC+AGG + chr8.2:36633089-36633108 MS.gene009069:intron 30.0%
CTTGTGAATATAGATAGCTT+TGG + chr8.2:36631758-36631777 MS.gene009069:CDS 30.0%
GTTAATGCAACGAAATTCAT+AGG + chr8.2:36632023-36632042 MS.gene009069:CDS 30.0%
GTTTATGTTAGTTAGGTTCA+TGG - chr8.2:36634290-36634309 None:intergenic 30.0%
TAAAGACAATCTAATCATCC+AGG + chr8.2:36632052-36632071 MS.gene009069:CDS 30.0%
TATAGATGAACTTGTATCGA+TGG - chr8.2:36632562-36632581 None:intergenic 30.0%
TATGAATTCCATCAGTGTTT+GGG - chr8.2:36632692-36632711 None:intergenic 30.0%
TCACTTACATTTCAGAACTA+TGG + chr8.2:36634432-36634451 MS.gene009069:intron 30.0%
TCGTTGCATTAACAAGATAA+CGG - chr8.2:36632016-36632035 None:intergenic 30.0%
TTATGTTAGTTAGGTTCATG+GGG - chr8.2:36634288-36634307 None:intergenic 30.0%
TTCTTCTTGGTTTCTTTACT+CGG + chr8.2:36631578-36631597 MS.gene009069:CDS 30.0%
! ATGGTCTTAGAATTAAGACT+TGG + chr8.2:36634042-36634061 MS.gene009069:CDS 30.0%
! GGAATCAATAGAACAGATTT+TGG - chr8.2:36631984-36632003 None:intergenic 30.0%
! TTTCTAGAAGAGTTAGTTAC+AGG + chr8.2:36633778-36633797 MS.gene009069:intron 30.0%
!! AGTCTTAATTCTAAGACCAT+TGG - chr8.2:36634042-36634061 None:intergenic 30.0%
!! ATCTTGAGAAGTTTTATCAC+TGG - chr8.2:36635081-36635100 None:intergenic 30.0%
!! TCTGTTCTATTGATTCCAAA+AGG + chr8.2:36631987-36632006 MS.gene009069:CDS 30.0%
!! TGTTTTGTTCATGTCATGTA+GGG + chr8.2:36634533-36634552 MS.gene009069:intron 30.0%
!! TTGTTTTGTTCATGTCATGT+AGG + chr8.2:36634532-36634551 MS.gene009069:intron 30.0%
!!! TCGAATTTTTGGAGTTAAAG+TGG + chr8.2:36632650-36632669 MS.gene009069:CDS 30.0%
AACTTTCTGACATACCTTCA+TGG + chr8.2:36631711-36631730 MS.gene009069:CDS 35.0%
AAGAAAGTTGTTCTTACCGT+TGG - chr8.2:36632460-36632479 None:intergenic 35.0%
ACATGCACTTTACACATTCA+AGG + chr8.2:36631864-36631883 MS.gene009069:intron 35.0%
ATCAACTTCATGTGAGTTTG+GGG - chr8.2:36633728-36633747 None:intergenic 35.0%
ATTGTCCAAGACTGCAAAAT+TGG + chr8.2:36632732-36632751 MS.gene009069:CDS 35.0%
CATCAACTTCATGTGAGTTT+GGG - chr8.2:36633729-36633748 None:intergenic 35.0%
CTTGGTAAAGATAACTCAAC+TGG + chr8.2:36633969-36633988 MS.gene009069:CDS 35.0%
GTCACTGCAGTCAAATTTAA+TGG - chr8.2:36634925-36634944 None:intergenic 35.0%
TATAGCACAGTTAGTCAATG+TGG - chr8.2:36633083-36633102 None:intergenic 35.0%
TATAGGCTCTTCAAAAAGCA+TGG + chr8.2:36631940-36631959 MS.gene009069:intron 35.0%
TCTCCAAATCAACATTGCTA+AGG - chr8.2:36634971-36634990 None:intergenic 35.0%
TCTTAGAATTAAGACTTGGC+AGG + chr8.2:36634046-36634065 MS.gene009069:CDS 35.0%
TGGAAAGTGGAAACCATATT+AGG + chr8.2:36633891-36633910 MS.gene009069:intron 35.0%
TTGGAGTTTCGACAAAATTG+CGG - chr8.2:36632841-36632860 None:intergenic 35.0%
TTGGATACAGCACTTCTAAA+GGG + chr8.2:36634011-36634030 MS.gene009069:CDS 35.0%
TTTGCATTTCTCCAGATTGA+TGG + chr8.2:36632141-36632160 MS.gene009069:intron 35.0%
TTTGGATACAGCACTTCTAA+AGG + chr8.2:36634010-36634029 MS.gene009069:CDS 35.0%
! AACTTTTACCAAAATCACGG+TGG + chr8.2:36632866-36632885 MS.gene009069:intron 35.0%
! AGTCCTTAGCAATGTTGATT+TGG + chr8.2:36634965-36634984 MS.gene009069:CDS 35.0%
! ATAGGCTCTTCAAAAAGCAT+GGG + chr8.2:36631941-36631960 MS.gene009069:intron 35.0%
! ATGATGTGCGACAACAATTT+TGG + chr8.2:36631635-36631654 MS.gene009069:CDS 35.0%
! TACGTGACTTGTGTAAACAT+AGG + chr8.2:36633830-36633849 MS.gene009069:intron 35.0%
! TGCGATTCTGTTCGAATTTT+TGG + chr8.2:36632639-36632658 MS.gene009069:CDS 35.0%
! TGTAGTCACGAAAGTGATTT+TGG + chr8.2:36633992-36634011 MS.gene009069:CDS 35.0%
! TTGTAGTCCCACTTACATTT+TGG - chr8.2:36634890-36634909 None:intergenic 35.0%
! TTTACTCGGTTTGCTTATAG+TGG + chr8.2:36631592-36631611 MS.gene009069:CDS 35.0%
!! GTTGATTTGGAGAAACAAGA+TGG + chr8.2:36634978-36634997 MS.gene009069:CDS 35.0%
!! TAGGGTTTTGACAGACTTTA+AGG - chr8.2:36634260-36634279 None:intergenic 35.0%
!! TTGAAGAAAGCTGTTTTCCA+AGG + chr8.2:36632237-36632256 MS.gene009069:CDS 35.0%
!! TTTTACAGCATTGGAAGTCT+TGG + chr8.2:36633951-36633970 MS.gene009069:intron 35.0%
!!! AAGAGAATTTTTTGTGGACC+AGG + chr8.2:36633158-36633177 MS.gene009069:CDS 35.0%
!!! ATGTGTTGATTTTGAGTACC+TGG - chr8.2:36634670-36634689 None:intergenic 35.0%
!!! TTTTTTGTGTAAGCATCACC+TGG - chr8.2:36632073-36632092 None:intergenic 35.0%
ACATATTGCCATTCAGCTCA+AGG + chr8.2:36635011-36635030 MS.gene009069:CDS 40.0%
ATCCAAATCCTTGAGCTGAA+TGG - chr8.2:36635022-36635041 None:intergenic 40.0%
ATGTAACTCACGTTATTGCG+AGG - chr8.2:36634177-36634196 None:intergenic 40.0%
CAAGACTGCAAAATTGGAAC+AGG + chr8.2:36632738-36632757 MS.gene009069:CDS 40.0%
CATAATCTTCCTCTGTGTCA+AGG - chr8.2:36631682-36631701 None:intergenic 40.0%
CATCAAAGAAATCCTCACAC+CGG - chr8.2:36634202-36634221 None:intergenic 40.0%
CTAAATTGAGGGGTGAAGAT+TGG - chr8.2:36633203-36633222 None:intergenic 40.0%
GCAGTCAAATTTAATGGCCT+TGG - chr8.2:36634919-36634938 None:intergenic 40.0%
GCATCAACTTCATGTGAGTT+TGG - chr8.2:36633730-36633749 None:intergenic 40.0%
TCAGCTCAAGGATTTGGATA+TGG + chr8.2:36635023-36635042 MS.gene009069:CDS 40.0%
TGACACAGAGGAAGATTATG+AGG + chr8.2:36631682-36631701 MS.gene009069:CDS 40.0%
TGGAGAAACTGATGATACTG+AGG + chr8.2:36631793-36631812 MS.gene009069:CDS 40.0%
TTATCTCCAAAGCTGATGAC+TGG - chr8.2:36634854-36634873 None:intergenic 40.0%
TTTGTTCATGTCATGTAGGG+AGG + chr8.2:36634536-36634555 MS.gene009069:intron 40.0%
! AATGCATCTGTTGGCTATTC+TGG - chr8.2:36632605-36632624 None:intergenic 40.0%
! CTGTTCCAATTTTGCAGTCT+TGG - chr8.2:36632740-36632759 None:intergenic 40.0%
! GAATTAAGGCATTCAGCTGA+AGG - chr8.2:36635059-36635078 None:intergenic 40.0%
! TAGGCTCTTCAAAAAGCATG+GGG + chr8.2:36631942-36631961 MS.gene009069:intron 40.0%
! TGGATACAGCACTTCTAAAG+GGG + chr8.2:36634012-36634031 MS.gene009069:CDS 40.0%
! TTTTTCTCACAGCCTTGCAA+AGG + chr8.2:36632430-36632449 MS.gene009069:intron 40.0%
!! AGGTGCTGGATATGTTAAAG+GGG + chr8.2:36634556-36634575 MS.gene009069:CDS 40.0%
!! GAGGTGCTGGATATGTTAAA+GGG + chr8.2:36634555-36634574 MS.gene009069:CDS 40.0%
!!! AGTTTTGGATCCCAGTTCTT+AGG - chr8.2:36632189-36632208 None:intergenic 40.0%
!!! ATTTTTTGTGGACCAGGACA+TGG + chr8.2:36633164-36633183 MS.gene009069:CDS 40.0%
ACTCAACAACCTTGACACAG+AGG + chr8.2:36631670-36631689 MS.gene009069:CDS 45.0%
ATAGTGGCGAATGGAGTTTC+AGG + chr8.2:36631608-36631627 MS.gene009069:CDS 45.0%
ATCCAAAACTTCCACGCGTT+TGG + chr8.2:36632199-36632218 MS.gene009069:CDS 45.0%
CAACCAGTGTTCCATCAATC+TGG - chr8.2:36632155-36632174 None:intergenic 45.0%
CGGTGTGAGGATTTCTTTGA+TGG + chr8.2:36634200-36634219 MS.gene009069:intron 45.0%
CTAAGGACTAAGTTGCTGCA+TGG - chr8.2:36634954-36634973 None:intergenic 45.0%
CTTCTTCCAGTCATCAGCTT+TGG + chr8.2:36634845-36634864 MS.gene009069:intron 45.0%
GGTACGCTTTCAGAATGTGA+GGG + chr8.2:36634577-36634596 MS.gene009069:CDS 45.0%
TAGGTTCATGGGGTTCACTA+GGG - chr8.2:36634278-36634297 None:intergenic 45.0%
TCCAACCTCATGTCAAAACC+AGG + chr8.2:36634649-36634668 MS.gene009069:CDS 45.0%
TCCCAGTTCTTAGGATCTTC+CGG - chr8.2:36632180-36632199 None:intergenic 45.0%
TCCGGAAGATCCTAAGAACT+GGG + chr8.2:36632176-36632195 MS.gene009069:CDS 45.0%
TCTCCAGATTGATGGAACAC+TGG + chr8.2:36632149-36632168 MS.gene009069:intron 45.0%
TGAGTTACATTACCGGTGTG+AGG + chr8.2:36634187-36634206 MS.gene009069:intron 45.0%
TGATACCTGATTCCATGTCC+TGG - chr8.2:36633179-36633198 None:intergenic 45.0%
TGCCATTCAGCTCAAGGATT+TGG + chr8.2:36635017-36635036 MS.gene009069:CDS 45.0%
TGGGACTACAAATAGTGCCA+AGG + chr8.2:36634899-36634918 MS.gene009069:CDS 45.0%
TTAGGTTCATGGGGTTCACT+AGG - chr8.2:36634279-36634298 None:intergenic 45.0%
TTGACGGCTCAGGAAGTAAA+TGG + chr8.2:36632271-36632290 MS.gene009069:CDS 45.0%
! CTTCTAAAGGGGACTACCAA+TGG + chr8.2:36634023-36634042 MS.gene009069:CDS 45.0%
! GGTTTGCTTATAGTGGCGAA+TGG + chr8.2:36631599-36631618 MS.gene009069:CDS 45.0%
!! AAAGCTGTTTTCCAAGGCTC+TGG + chr8.2:36632243-36632262 MS.gene009069:CDS 45.0%
!! ACAAGATAACGGCGTCCTTT+TGG - chr8.2:36632005-36632024 None:intergenic 45.0%
!! ATAGATAGCTTTGGTGCTGC+AGG + chr8.2:36631767-36631786 MS.gene009069:CDS 45.0%
!! CAAGGCTCTGGAGTTATTGA+CGG + chr8.2:36632255-36632274 MS.gene009069:CDS 45.0%
!! CTCACATGAAGTTGATGCCA+CGG + chr8.2:36633732-36633751 MS.gene009069:intron 45.0%
!! GGAGGTGCTGGATATGTTAA+AGG + chr8.2:36634554-36634573 MS.gene009069:CDS 45.0%
!!! ACCTGGTTTTGACATGAGGT+TGG - chr8.2:36634653-36634672 None:intergenic 45.0%
!!! GAGTACCTGGTTTTGACATG+AGG - chr8.2:36634657-36634676 None:intergenic 45.0%
AAAAGTGGGAACCACAACCG+TGG - chr8.2:36633752-36633771 None:intergenic 50.0%
ACGCTTTCAGAATGTGAGGG+TGG + chr8.2:36634580-36634599 MS.gene009069:CDS 50.0%
ACGGCTCAGGAAGTAAATGG+TGG + chr8.2:36632274-36632293 MS.gene009069:CDS 50.0%
CGGCTCAGGAAGTAAATGGT+GGG + chr8.2:36632275-36632294 MS.gene009069:CDS 50.0%
CGTCAATAACTCCAGAGCCT+TGG - chr8.2:36632257-36632276 None:intergenic 50.0%
CTCCGGAAGATCCTAAGAAC+TGG + chr8.2:36632175-36632194 MS.gene009069:CDS 50.0%
GAAAAATCGAGCCAAACGCG+TGG - chr8.2:36632213-36632232 None:intergenic 50.0%
GGAGTTAAAGTGGCTTCACC+AGG + chr8.2:36632660-36632679 MS.gene009069:CDS 50.0%
GGGTACGCTTTCAGAATGTG+AGG + chr8.2:36634576-36634595 MS.gene009069:CDS 50.0%
TCTGAAGGGTGATTCATCGC+AGG + chr8.2:36632530-36632549 MS.gene009069:intron 50.0%
! ACAGTGTGCCACCGTGATTT+TGG - chr8.2:36632877-36632896 None:intergenic 50.0%
! AGCCAAACGCGTGGAAGTTT+TGG - chr8.2:36632204-36632223 None:intergenic 50.0%
! TCTGGAGTTATTGACGGCTC+AGG + chr8.2:36632261-36632280 MS.gene009069:CDS 50.0%
! TGATGGAACACTGGTTGCTC+CGG + chr8.2:36632158-36632177 MS.gene009069:CDS 50.0%
!! AGCTTTGGTGCTGCAGGAAA+TGG + chr8.2:36631773-36631792 MS.gene009069:CDS 50.0%
!! TGAAGTTGATGCCACGGTTG+TGG + chr8.2:36633738-36633757 MS.gene009069:intron 50.0%
ACCGTTGGTGCACCTTTGCA+AGG - chr8.2:36632445-36632464 None:intergenic 55.0%
CCTTCATGGACAAGCGAACG+CGG + chr8.2:36631725-36631744 MS.gene009069:CDS 55.0%
GGAGACAGCCCAAACACTGA+TGG + chr8.2:36632681-36632700 MS.gene009069:CDS 55.0%
GTGGACCAGGACATGGAATC+AGG + chr8.2:36633171-36633190 MS.gene009069:CDS 55.0%
TCAGTGTTTGGGCTGTCTCC+TGG - chr8.2:36632681-36632700 None:intergenic 55.0%
! CATGTCATGTAGGGAGGTGC+TGG + chr8.2:36634542-36634561 MS.gene009069:intron 55.0%
! GCCTTGCAAAGGTGCACCAA+CGG + chr8.2:36632441-36632460 MS.gene009069:intron 55.0%
CCGCGTTCGCTTGTCCATGA+AGG - chr8.2:36631728-36631747 None:intergenic 60.0%
TCATGGACAAGCGAACGCGG+CGG + chr8.2:36631728-36631747 MS.gene009069:CDS 60.0%


Chromosome Type Strat End Strand Name
chr8.2 gene 36631569 36635160 36631569 ID=MS.gene009069
chr8.2 mRNA 36631569 36635160 36631569 ID=MS.gene009069.t1;Parent=MS.gene009069
chr8.2 exon 36631569 36631814 36631569 ID=MS.gene009069.t1.exon1;Parent=MS.gene009069.t1
chr8.2 CDS 36631569 36631814 36631569 ID=cds.MS.gene009069.t1;Parent=MS.gene009069.t1
chr8.2 exon 36631945 36632073 36631945 ID=MS.gene009069.t1.exon2;Parent=MS.gene009069.t1
chr8.2 CDS 36631945 36632073 36631945 ID=cds.MS.gene009069.t1;Parent=MS.gene009069.t1
chr8.2 exon 36632156 36632326 36632156 ID=MS.gene009069.t1.exon3;Parent=MS.gene009069.t1
chr8.2 CDS 36632156 36632326 36632156 ID=cds.MS.gene009069.t1;Parent=MS.gene009069.t1
chr8.2 exon 36632442 36632462 36632442 ID=MS.gene009069.t1.exon4;Parent=MS.gene009069.t1
chr8.2 CDS 36632442 36632462 36632442 ID=cds.MS.gene009069.t1;Parent=MS.gene009069.t1
chr8.2 exon 36632552 36632759 36632552 ID=MS.gene009069.t1.exon5;Parent=MS.gene009069.t1
chr8.2 CDS 36632552 36632759 36632552 ID=cds.MS.gene009069.t1;Parent=MS.gene009069.t1
chr8.2 exon 36633111 36633192 36633111 ID=MS.gene009069.t1.exon6;Parent=MS.gene009069.t1
chr8.2 CDS 36633111 36633192 36633111 ID=cds.MS.gene009069.t1;Parent=MS.gene009069.t1
chr8.2 exon 36633959 36634067 36633959 ID=MS.gene009069.t1.exon7;Parent=MS.gene009069.t1
chr8.2 CDS 36633959 36634067 36633959 ID=cds.MS.gene009069.t1;Parent=MS.gene009069.t1
chr8.2 exon 36634554 36634670 36634554 ID=MS.gene009069.t1.exon8;Parent=MS.gene009069.t1
chr8.2 CDS 36634554 36634670 36634554 ID=cds.MS.gene009069.t1;Parent=MS.gene009069.t1
chr8.2 exon 36634855 36635160 36634855 ID=MS.gene009069.t1.exon9;Parent=MS.gene009069.t1
chr8.2 CDS 36634855 36635160 36634855 ID=cds.MS.gene009069.t1;Parent=MS.gene009069.t1
Gene Sequence

>MS.gene009069

ATGGACAGATTCTTCTTGGTTTCTTTACTCGGTTTGCTTATAGTGGCGAATGGAGTTTCAGGAAGCATGATGTGCGACAACAATTTTGGCATGCTTGAAGAACTCAACAACCTTGACACAGAGGAAGATTATGAGGTAGAAGAACTTTCTGACATACCTTCATGGACAAGCGAACGCGGCGGAAAAGTTCTTGTGAATATAGATAGCTTTGGTGCTGCAGGAAATGGAGAAACTGATGATACTGAGGTAAAGTTCTTTCATTACTTGCAAATTAGTCCTATTTTTTCTATGTTCAACATGCACTTTACACATTCAAGGTTGTTGAACATATGCAACTGTTATATTTTTTTCTGTATTGATCAATTCTTATTTATAGGCTCTTCAAAAAGCATGGGGAGTTGCTTGTTCTACACCAAAATCTGTTCTATTGATTCCAAAAGGACGCCGTTATCTTGTTAATGCAACGAAATTCATAGGGCCTTGTAAAGACAATCTAATCATCCAGGTGATGCTTACACAAAAAAATTATTTAGTTTTATCAGCGACTCATCATTACAATTACTGACATGGTATTTGCATTTCTCCAGATTGATGGAACACTGGTTGCTCCGGAAGATCCTAAGAACTGGGATCCAAAACTTCCACGCGTTTGGCTCGATTTTTCTAAATTGAAGAAAGCTGTTTTCCAAGGCTCTGGAGTTATTGACGGCTCAGGAAGTAAATGGTGGGCAGCATCTTGCAAAAAGAACAAGACTAATGTAAAATTTTTCAGAATATTTGGCTTTGTTATCTTACAAATATTTAAAAATAAACTTATATTGCAGGCAATAATAATTTTCTGTTTTTGTTTTTTTTTTTTTCTTTTTCTCACAGCCTTGCAAAGGTGCACCAACGGTAAGAACAACTTTCTTACACCATTGTTGTATTCTATATTTTAAGCACAAAAAAATGTAGTTTTAACTCTGAAGGGTGATTCATCGCAGGCACTAACCATCGATACAAGTTCATCTATAAAGGTTAAAGGACTAACTATCCAGAATAGCCAACAGATGCATTTTACGATATCACGATGCGATTCTGTTCGAATTTTTGGAGTTAAAGTGGCTTCACCAGGAGACAGCCCAAACACTGATGGAATTCATATTAGTGAATCAACAAATGTCATTGTCCAAGACTGCAAAATTGGAACAGGTTCTGAACTTAGAATCAACATGTTTATGATTGAGTAGTGTGGTCCTTAATAAATGCATGTTTGAAATCACATTTGCACCGCAATTTTGTCGAAACTCCAACGTATAACTTTTACCAAAATCACGGTGGCACACTGTGCTTATGTCAAATTTACTGTCAATCCAAACATGCAACTAAAATTTAATTATGTTGAAATTTTACATTCAAATTTTCTTTCAAAGTATAAACATATCTAAATATAAATCGCTTTATTTCGAACTCAATTATACTCAAAACAATTTATAATTTTCATTTAAAATCATATAAAATGGTCACACAAACCACATTGACTAACTGTGCTATATTATTCAGGGGATGATTGCATTTCAATTGTGAATGCTAGTTCTAATATCAAAATGAAGAGAATTTTTTGTGGACCAGGACATGGAATCAGGTATCATCCAATCTTCACCCCTCAATTTAGTACAAAATCAATGTTAATACTTGTTTGTTACGTTTAAAATTAGAGTGCTTATGGTTGCACAAAGATTTTCTGACACTAATGCCACTCATGAAATTTTTGTGTCTAAACGCTTTGTAAAACTATCTACCTTTATATATGCCACTTGTGATAATGTAAATTGACATCTGTAAAAAAATTAAAAAGATAAAAGTGATATTGAAATCATAAATTAATTTTTTACTGTTATTTGACATATATTTAAGTATTTACTAGTAAAATCATTTTTACCTCTGAAATTCAAATAACTAAAATGATGTTAAGTAGATTTTGTTCTAAGTTAAAATGATGAAAATAGTTTAGCTTTATTTTATCTTTTGTTATAGAAATAGTTCATCAATAAATACTTATATAATAAGTGATTTATTAAGCTGTATATACAATTAGACTAAAAGCATTCAAGCACAACTAACTTTACTTCAAAGTTTTTAACTTAAATTTAATCAAATTAAACATATTCAGGCAACCCCAAACTCACATGAAGTTGATGCCACGGTTGTGGTTCCCACTTTTTTTATCTTTCTAGAAGAGTTAGTTACAGGAACCACACACATAACATTATTTTAATGGTTACGTGACTTGTGTAAACATAGGATATCAAACTCAAAGATAAAAATAAATTTATATTGCACTGGAAAGTGGAAACCATATTAGGTAAAGTAGTTATTTTCTTTCTCTAACACTACTTTTTTTTTTACAGCATTGGAAGTCTTGGTAAAGATAACTCAACTGGTGTAGTCACGAAAGTGATTTTGGATACAGCACTTCTAAAGGGGACTACCAATGGTCTTAGAATTAAGACTTGGCAGGTAGAATTTTTTATTTCTATCTTGATTAAATTTTGCTAAATATTTATTATGTAGTATTGTTAATTAATTAATTTAATTGACTCAATTGATAAAGAGCTTAATCATACCTCGCAATAACGTGAGTTACATTACCGGTGTGAGGATTTCTTTGATGGAGAATTTGTAAATACTTTGTTAGCGTTCTCTGAGCCTTAAAGTCTGTCAAAACCCTAGTGAACCCCATGAACCTAACTAACATAAACTTTATTCTATAAAAAACAATATCATTAATTAGTTTAACTATGAGTTTAGTGGATATACACATAGAGTGAAAGAGAAAATTATATCGCATTTAATTGAACATTTTATAATTTGAAATTATTTTTCACTTACATTTCAGAACTATGGGAACTGATGAATTTGAAAATGACAAATAATGCTTTACTGATGAATTTGAAAATGACAAATAATGCTTTCTCTCTATCTTGTTTTGTTCATGTCATGTAGGGAGGTGCTGGATATGTTAAAGGGGTACGCTTTCAGAATGTGAGGGTGGAAAATGTATCAAACCCCATTCTTATAGATCAATTTTACTGTGATTCTCCAACCTCATGTCAAAACCAGGTACTCAAAATCAACACATCATTTTAAAGATTTGAGTTCTTTAATGTTTCATTTTTTTTAATGATGTTTAAATTATTATTGTATATGCTTGATTAATTAATTATGGTTTTGATACTTTTCCAATCAAGCAAATTTTATCCTACATTAATATTTAACTTGTATGATTTTTTTTTTCTTCTTCCAGTCATCAGCTTTGGAGATAAGTGAGATAATGTACCAAAATGTAAGTGGGACTACAAATAGTGCCAAGGCCATTAAATTTGACTGCAGTGACACTGTTCCATGCAGCAACTTAGTCCTTAGCAATGTTGATTTGGAGAAACAAGATGGCACAGTTGAAACATATTGCCATTCAGCTCAAGGATTTGGATATGGTGTTGTTCATCCTTCAGCTGAATGCCTTAATTCCAGTGATAAAACTTCTCAAGATGATGAATCTCAATCTATTATTTCTGAAGATGATGATTATACCCGTCACACAGAACTATAG
Protein sequence

>MS.gene009069.t1

MDRFFLVSLLGLLIVANGVSGSMMCDNNFGMLEELNNLDTEEDYEVEELSDIPSWTSERGGKVLVNIDSFGAAGNGETDDTEALQKAWGVACSTPKSVLLIPKGRRYLVNATKFIGPCKDNLIIQIDGTLVAPEDPKNWDPKLPRVWLDFSKLKKAVFQGSGVIDGSGSKWWAASCKKNKTNPCKGAPTALTIDTSSSIKVKGLTIQNSQQMHFTISRCDSVRIFGVKVASPGDSPNTDGIHISESTNVIVQDCKIGTGDDCISIVNASSNIKMKRIFCGPGHGISIGSLGKDNSTGVVTKVILDTALLKGTTNGLRIKTWQGGAGYVKGVRFQNVRVENVSNPILIDQFYCDSPTSCQNQSSALEISEIMYQNVSGTTNSAKAIKFDCSDTVPCSNLVLSNVDLEKQDGTVETYCHSAQGFGYGVVHPSAECLNSSDKTSQDDESQSIISEDDDYTRHTEL