Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene009404.t1 | XP_003598166.2 | 96 | 475 | 17 | 1 | 1 | 475 | 1 | 473 | 1.20E-262 | 915.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene009404.t1 | Q8GW43 | 67.8 | 463 | 135 | 2 | 12 | 464 | 6 | 464 | 3.0e-185 | 649.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene009404.t1 | G7IVJ8 | 96.0 | 475 | 17 | 1 | 1 | 475 | 1 | 473 | 8.9e-263 | 915.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene08162 | MS.gene009404 | PPI |
| MS.gene009404 | MS.gene067859 | PPI |
| MS.gene009404 | MS.gene41778 | PPI |
| MS.gene009404 | MS.gene042467 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene009404.t1 | MTR_3g008020 | 96.000 | 475 | 17 | 1 | 1 | 475 | 1 | 473 | 0.0 | 905 |
| MS.gene009404.t1 | MTR_6g033290 | 26.176 | 340 | 205 | 6 | 144 | 457 | 143 | 462 | 1.05e-25 | 110 |
| MS.gene009404.t1 | MTR_3g054030 | 23.117 | 385 | 243 | 13 | 102 | 455 | 110 | 472 | 1.52e-18 | 88.6 |
| MS.gene009404.t1 | MTR_5g072020 | 22.857 | 385 | 244 | 13 | 102 | 455 | 110 | 472 | 7.14e-18 | 86.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene009404.t1 | AT5G04620 | 69.330 | 463 | 128 | 2 | 12 | 464 | 6 | 464 | 0.0 | 663 |
| MS.gene009404.t1 | AT5G04620 | 69.512 | 410 | 111 | 2 | 12 | 411 | 6 | 411 | 0.0 | 582 |
| MS.gene009404.t1 | AT5G04620 | 76.133 | 331 | 79 | 0 | 134 | 464 | 1 | 331 | 0.0 | 528 |
| MS.gene009404.t1 | AT5G23670 | 25.982 | 331 | 199 | 7 | 144 | 448 | 143 | 453 | 4.35e-26 | 111 |
| MS.gene009404.t1 | AT5G23670 | 25.982 | 331 | 199 | 7 | 144 | 448 | 143 | 453 | 4.35e-26 | 111 |
| MS.gene009404.t1 | AT3G48780 | 25.982 | 331 | 199 | 7 | 144 | 448 | 143 | 453 | 2.31e-25 | 108 |
| MS.gene009404.t1 | AT3G48780 | 25.982 | 331 | 199 | 7 | 144 | 448 | 143 | 453 | 2.31e-25 | 108 |
| MS.gene009404.t1 | AT3G48790 | 25.994 | 327 | 203 | 9 | 141 | 448 | 4 | 310 | 1.36e-22 | 99.4 |
| MS.gene009404.t1 | AT3G48790 | 27.170 | 265 | 168 | 8 | 203 | 448 | 20 | 278 | 1.95e-19 | 89.4 |
| MS.gene009404.t1 | AT4G36480 | 21.898 | 274 | 184 | 7 | 102 | 365 | 109 | 362 | 7.56e-16 | 80.1 |
| MS.gene009404.t1 | AT4G36480 | 21.898 | 274 | 184 | 7 | 102 | 365 | 109 | 362 | 7.56e-16 | 80.1 |
| MS.gene009404.t1 | AT4G36480 | 20.492 | 244 | 166 | 5 | 102 | 337 | 109 | 332 | 5.47e-13 | 70.5 |
Find 119 sgRNAs with CRISPR-Local
Find 399 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTAGGTGAAGAGATTGTTTA+TGG | 0.198161 | 3.4:+3391517 | MS.gene009404:intron |
| AAAGACTTTCATTTGCTTAC+AGG | 0.206039 | 3.4:+3395209 | MS.gene009404:CDS |
| ATTGTTTATGGTGCAGTTTC+TGG | 0.219909 | 3.4:+3391529 | MS.gene009404:CDS |
| CTCTAGCTGCCTATGATAAT+TGG | 0.252472 | 3.4:-3391840 | None:intergenic |
| GGTAGATGATGATGCGTTTC+AGG | 0.254633 | 3.4:+3390402 | MS.gene009404:CDS |
| CGTCTTGCTGAGCGGCAAAA+AGG | 0.257869 | 3.4:+3392912 | MS.gene009404:CDS |
| TTCCAAGATACACGAATTTA+CGG | 0.288778 | 3.4:+3396350 | MS.gene009404:CDS |
| TTTCCAAATCTTCCCTTGTA+TGG | 0.320552 | 3.4:-3396295 | None:intergenic |
| TACAGGATTTGCTGCCAATA+TGG | 0.344081 | 3.4:+3392767 | MS.gene009404:CDS |
| GATATGATGGGACTTGTAAC+AGG | 0.356056 | 3.4:-3395236 | None:intergenic |
| ATGGAGGATTTATAGCTTGC+AGG | 0.364817 | 3.4:+3394367 | MS.gene009404:CDS |
| TGCCACCATGCACTTGGTAT+TGG | 0.380187 | 3.4:-3390298 | None:intergenic |
| GCAGCAGCAGCAACTGGAAC+CGG | 0.383798 | 3.4:-3394602 | None:intergenic |
| CCAGTTGCTGCTGCTGCTCA+TGG | 0.386729 | 3.4:+3394608 | MS.gene009404:CDS |
| AGGGGTTCTGCTCTTATTTG+TGG | 0.388904 | 3.4:+3391812 | MS.gene009404:CDS |
| GTCTTCAGTGCCAACGATAA+GGG | 0.391432 | 3.4:-3395258 | None:intergenic |
| GTGAAACCACGTTTAGGAAA+TGG | 0.396653 | 3.4:+3390476 | MS.gene009404:CDS |
| AAATTCGTGAAACCACGTTT+AGG | 0.399614 | 3.4:+3390470 | MS.gene009404:CDS |
| AGTATTGGTTCTCTCTTAGC+TGG | 0.404148 | 3.4:+3392810 | MS.gene009404:CDS |
| TGCTGTCATCAAGGCCATAT+TGG | 0.404382 | 3.4:-3392781 | None:intergenic |
| ATGACAGCAATTGGAAGTAT+TGG | 0.404847 | 3.4:+3392795 | MS.gene009404:CDS |
| GTGGATATACCAATTATCAT+AGG | 0.411155 | 3.4:+3391831 | MS.gene009404:CDS |
| GATTGCCTTCTTTGTCCTAC+AGG | 0.411725 | 3.4:+3392750 | MS.gene009404:CDS |
| AGTCCATACAAGGGAAGATT+TGG | 0.414221 | 3.4:+3396292 | MS.gene009404:CDS |
| GCTACTAACCTGCAGGAGTT+AGG | 0.415259 | 3.4:-3395493 | None:intergenic |
| TGCAGCTTGTTTAGCATGGA+TGG | 0.419362 | 3.4:+3393840 | MS.gene009404:intron |
| TACCTCACGTTGGAGACAAA+TGG | 0.419730 | 3.4:-3390383 | None:intergenic |
| AAAGATAATTTACCGGAACT+TGG | 0.420440 | 3.4:-3390511 | None:intergenic |
| AGCCGTAAATTCGTGTATCT+TGG | 0.428138 | 3.4:-3396352 | None:intergenic |
| TGTCTTCAGTGCCAACGATA+AGG | 0.430524 | 3.4:-3395259 | None:intergenic |
| CATGGCGTAGAAAGGCCATT+TGG | 0.432019 | 3.4:+3395177 | MS.gene009404:CDS |
| TAGGCAGCTAGAGTCGAGTT+TGG | 0.436591 | 3.4:+3391850 | MS.gene009404:CDS |
| ATGGCCTTGATGACAGCAAT+TGG | 0.443915 | 3.4:+3392786 | MS.gene009404:CDS |
| GTAGAAAGGCCATTTGGAAC+CGG | 0.446898 | 3.4:+3395183 | MS.gene009404:CDS |
| CCATGAGCAGCAGCAGCAAC+TGG | 0.447831 | 3.4:-3394608 | None:intergenic |
| CATGCACTTGGTATTGGTAT+TGG | 0.448515 | 3.4:-3390292 | None:intergenic |
| AAGATAATTTACCGGAACTT+GGG | 0.449828 | 3.4:-3390510 | None:intergenic |
| CCCTCAGTGCAGTCCATACA+AGG | 0.466293 | 3.4:+3396282 | MS.gene009404:CDS |
| GCCAACGATAAGGGATATGA+TGG | 0.470013 | 3.4:-3395249 | None:intergenic |
| ATGCATGATACCCCAAGTTC+CGG | 0.470094 | 3.4:+3390499 | MS.gene009404:CDS |
| AACAGGCATTTATTACAAGC+TGG | 0.479117 | 3.4:+3395433 | MS.gene009404:intron |
| GTCTTTCACCCGGTTCCAAA+TGG | 0.482290 | 3.4:-3395192 | None:intergenic |
| ACCTCACGTTGGAGACAAAT+GGG | 0.492342 | 3.4:-3390382 | None:intergenic |
| GGATGGGGACTTTGCACCAA+TGG | 0.499074 | 3.4:+3393857 | MS.gene009404:CDS |
| ATGGGATCGTTCTTCTGTTG+AGG | 0.500572 | 3.4:+3390444 | MS.gene009404:CDS |
| GCTCATGGGACATTTGTTTG+TGG | 0.500720 | 3.4:+3394255 | MS.gene009404:CDS |
| CTGTGCCTCCTAACTCCTGC+AGG | 0.500969 | 3.4:+3395485 | MS.gene009404:CDS |
| AGTAAAGCTGCCGGCTGCCA+TGG | 0.511804 | 3.4:+3394348 | MS.gene009404:CDS |
| GCAGCTTGTTTAGCATGGAT+GGG | 0.512276 | 3.4:+3393841 | MS.gene009404:intron |
| AATCACGCGTCAATAATTGA+TGG | 0.513514 | 3.4:+3392885 | MS.gene009404:CDS |
| ACATGAGACATGGCGTAGAA+AGG | 0.514262 | 3.4:+3395169 | MS.gene009404:CDS |
| CCTTGTATGGACTGCACTGA+GGG | 0.516556 | 3.4:-3396282 | None:intergenic |
| TGTTGGAAAGGCTGCTGCAA+AGG | 0.518319 | 3.4:+3391642 | MS.gene009404:CDS |
| AATGTGCGTTTCCAGGCTCA+TGG | 0.523142 | 3.4:+3394240 | MS.gene009404:intron |
| CAGCTTGTTTAGCATGGATG+GGG | 0.523345 | 3.4:+3393842 | MS.gene009404:intron |
| CAACAGTCGGATGGGAACTC+AGG | 0.527216 | 3.4:-3391624 | None:intergenic |
| TATTAGGCAGCTCAAGAACA+TGG | 0.535300 | 3.4:+3391779 | MS.gene009404:intron |
| ACTTCCAATTGCTGTCATCA+AGG | 0.535625 | 3.4:-3392790 | None:intergenic |
| GCAGCAGCCTTTCCAACAGT+CGG | 0.535904 | 3.4:-3391637 | None:intergenic |
| AAGAACATGGGATGGGACCA+AGG | 0.538361 | 3.4:+3391792 | MS.gene009404:CDS |
| GAAGTACTCTGAGAGAATCA+AGG | 0.543629 | 3.4:-3390348 | None:intergenic |
| TATAAATCCTCCATGGCAGC+CGG | 0.545155 | 3.4:-3394358 | None:intergenic |
| CAGCCTTTCCAACAGTCGGA+TGG | 0.546618 | 3.4:-3391633 | None:intergenic |
| GTTTCTGGTGATGATGAAGC+AGG | 0.549109 | 3.4:+3391544 | MS.gene009404:CDS |
| GCAGAACTCCGCAAGAAGCA+TGG | 0.550468 | 3.4:+3393888 | MS.gene009404:CDS |
| TTATTGCAGCTTGTTTAGCA+TGG | 0.551970 | 3.4:+3393836 | MS.gene009404:intron |
| GAGTTAGGAGGCACAGTTGG+TGG | 0.555017 | 3.4:-3395478 | None:intergenic |
| AGAACATGGGATGGGACCAA+GGG | 0.555717 | 3.4:+3391793 | MS.gene009404:CDS |
| TTCCCATCCGACTGTTGGAA+AGG | 0.557707 | 3.4:+3391630 | MS.gene009404:CDS |
| GTTCAATTGTGAGAAGGATG+TGG | 0.559563 | 3.4:+3394305 | MS.gene009404:CDS |
| GTATTGGTTCTCTCTTAGCT+GGG | 0.560380 | 3.4:+3392811 | MS.gene009404:CDS |
| ACACGAATTTACGGCTGCAA+TGG | 0.562509 | 3.4:+3396359 | MS.gene009404:CDS |
| CAAATCCTGTAGGACAAAGA+AGG | 0.562711 | 3.4:-3392755 | None:intergenic |
| CTGAGTTCCCATCCGACTGT+TGG | 0.564006 | 3.4:+3391625 | MS.gene009404:CDS |
| GGCAGCTCAAGAACATGGGA+TGG | 0.564408 | 3.4:+3391784 | MS.gene009404:intron |
| TAGAAAGGCCATTTGGAACC+GGG | 0.565145 | 3.4:+3395184 | MS.gene009404:CDS |
| AGCCTTTCCAACAGTCGGAT+GGG | 0.565761 | 3.4:-3391632 | None:intergenic |
| AGATAATTTACCGGAACTTG+GGG | 0.566826 | 3.4:-3390509 | None:intergenic |
| TCACAATGTCTATATATGTA+CGG | 0.573210 | 3.4:-3392942 | None:intergenic |
| GTTTGATGAAATGCAGCAAT+GGG | 0.577345 | 3.4:+3390426 | MS.gene009404:CDS |
| CAAATAAGAGCAGAACCCCT+TGG | 0.578144 | 3.4:-3391809 | None:intergenic |
| ATGTGCGTTTCCAGGCTCAT+GGG | 0.580951 | 3.4:+3394241 | MS.gene009404:intron |
| ACAAAGCACTGCAAGCAAGC+CGG | 0.591467 | 3.4:+3395279 | MS.gene009404:CDS |
| AGTTCTGCAAGCTCAACCAT+TGG | 0.591758 | 3.4:-3393873 | None:intergenic |
| CCCATCATATCCCTTATCGT+TGG | 0.593478 | 3.4:+3395248 | MS.gene009404:CDS |
| AAGTACTCTGAGAGAATCAA+GGG | 0.600416 | 3.4:-3390347 | None:intergenic |
| CTCACAAGAGTGTATTGAGG+TGG | 0.601182 | 3.4:-3392971 | None:intergenic |
| CAGGAGTTAGGAGGCACAGT+TGG | 0.603297 | 3.4:-3395481 | None:intergenic |
| AAGGATGTGGATATTTGCAT+TGG | 0.603517 | 3.4:+3394318 | MS.gene009404:CDS |
| ATGCATCCATTTCCTAAACG+TGG | 0.609430 | 3.4:-3390482 | None:intergenic |
| GTGGTCTGATTGCAGTCACA+TGG | 0.612568 | 3.4:-3395459 | None:intergenic |
| CCCTTGTATGGACTGCACTG+AGG | 0.613045 | 3.4:-3396283 | None:intergenic |
| TGCAAGCTATAAATCCTCCA+TGG | 0.620898 | 3.4:-3394365 | None:intergenic |
| AAAGCTGCCGGCTGCCATGG+AGG | 0.624806 | 3.4:+3394351 | MS.gene009404:CDS |
| TGTTTGATGAAATGCAGCAA+TGG | 0.626751 | 3.4:+3390425 | MS.gene009404:CDS |
| GCAGCTCAAGAACATGGGAT+GGG | 0.629189 | 3.4:+3391785 | MS.gene009404:CDS |
| CAATACCAATACCAAGTGCA+TGG | 0.635504 | 3.4:+3390293 | MS.gene009404:CDS |
| ATTAGGCAGCTCAAGAACAT+GGG | 0.637158 | 3.4:+3391780 | MS.gene009404:intron |
| ACTAACCTGCAGGAGTTAGG+AGG | 0.641127 | 3.4:-3395490 | None:intergenic |
| TCACAAGAGTGTATTGAGGT+GGG | 0.645382 | 3.4:-3392970 | None:intergenic |
| GCAAATGAAAGTCTTTCACC+CGG | 0.646068 | 3.4:-3395202 | None:intergenic |
| ATTGATGCAATTCGAGAGTG+CGG | 0.646071 | 3.4:-3396327 | None:intergenic |
| AAATGGTGGTGGTGTTGCTG+AGG | 0.647397 | 3.4:+3394281 | MS.gene009404:CDS |
| GGTACACTAAGTAAAGCTGC+CGG | 0.648395 | 3.4:+3394339 | MS.gene009404:CDS |
| GAACATGGGATGGGACCAAG+GGG | 0.650419 | 3.4:+3391794 | MS.gene009404:CDS |
| GAGTGGCAAAACATGAGACA+TGG | 0.650779 | 3.4:+3395159 | MS.gene009404:CDS |
| TTTCTGGTGATGATGAAGCA+GGG | 0.655163 | 3.4:+3391545 | MS.gene009404:CDS |
| TGAGGAGTTCAATTGTGAGA+AGG | 0.658460 | 3.4:+3394299 | MS.gene009404:CDS |
| ATATTGGCAGCAAATCCTGT+AGG | 0.658659 | 3.4:-3392765 | None:intergenic |
| ATATGATGGGACTTGTAACA+GGG | 0.666917 | 3.4:-3395235 | None:intergenic |
| ACCCATTTGTCTCCAACGTG+AGG | 0.667062 | 3.4:+3390381 | MS.gene009404:CDS |
| ATGGTATTCGTCTTGCTGAG+CGG | 0.672498 | 3.4:+3392904 | MS.gene009404:CDS |
| CCAACGATAAGGGATATGAT+GGG | 0.676737 | 3.4:-3395248 | None:intergenic |
| AAACTCACAAGAGTGTATTG+AGG | 0.681743 | 3.4:-3392974 | None:intergenic |
| CATCATCATCTACCTCACGT+TGG | 0.687422 | 3.4:-3390393 | None:intergenic |
| AAGTTATTAATACAGTCAAG+AGG | 0.690909 | 3.4:+3394551 | MS.gene009404:CDS |
| CCTCAGTGCAGTCCATACAA+GGG | 0.703411 | 3.4:+3396283 | MS.gene009404:CDS |
| TGAATTCTTATAGCACATCG+TGG | 0.706133 | 3.4:+3394528 | MS.gene009404:intron |
| TACCAATACCAAGTGCATGG+TGG | 0.719863 | 3.4:+3390296 | MS.gene009404:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATAATTGAAAATTGAAAA+TGG | - | chr3.4:3392510-3392529 | None:intergenic | 10.0% |
| !! | ACTATTAAGATTAATAAAAT+AGG | - | chr3.4:3393395-3393414 | None:intergenic | 10.0% |
| !! | TTTCAATTATTTATATTTCT+GGG | + | chr3.4:3392518-3392537 | MS.gene009404:intron | 10.0% |
| !!! | CTAATTCTTTTTTTTTTTTT+AGG | - | chr3.4:3394975-3394994 | None:intergenic | 10.0% |
| !!! | TTTTCAATTATTTATATTTC+TGG | + | chr3.4:3392517-3392536 | MS.gene009404:intron | 10.0% |
| !! | AAAGTATAAAATAATCCTAA+TGG | + | chr3.4:3392578-3392597 | MS.gene009404:intron | 15.0% |
| !! | AAGAAAAAATATTGAGAAAT+AGG | - | chr3.4:3394712-3394731 | None:intergenic | 15.0% |
| !! | ACGAAATTCAAAATAATTAT+AGG | - | chr3.4:3390876-3390895 | None:intergenic | 15.0% |
| !! | AGATTAATAATACATTACTT+AGG | - | chr3.4:3391960-3391979 | None:intergenic | 15.0% |
| !! | ATGAATAATATGCAAATTTA+AGG | - | chr3.4:3393007-3393026 | None:intergenic | 15.0% |
| !! | ATGGAAAAATATATAATCAA+AGG | - | chr3.4:3396212-3396231 | None:intergenic | 15.0% |
| !! | CATAGAATAGAAAAATTTAT+TGG | - | chr3.4:3394510-3394529 | None:intergenic | 15.0% |
| !! | TTGATATATCTTAAATATTG+AGG | + | chr3.4:3394654-3394673 | MS.gene009404:intron | 15.0% |
| !!! | AAAAGTATGTAAAAAATTAG+TGG | + | chr3.4:3393274-3393293 | MS.gene009404:intron | 15.0% |
| !!! | AGAAAATTAATTTTGTTTTC+TGG | + | chr3.4:3391586-3391605 | MS.gene009404:CDS | 15.0% |
| !!! | TTACTTTCTAGAAATATAAA+TGG | - | chr3.4:3394083-3394102 | None:intergenic | 15.0% |
| !!! | TTATTTTCTCAATCTATTAT+AGG | - | chr3.4:3390636-3390655 | None:intergenic | 15.0% |
| !!! | TTCAACCATATTTTTATAAT+AGG | - | chr3.4:3391077-3391096 | None:intergenic | 15.0% |
| !! | AACAAATATAGGAGATATTT+AGG | - | chr3.4:3393223-3393242 | None:intergenic | 20.0% |
| !! | ATCGTTAAATAAAGAAGATT+TGG | + | chr3.4:3391347-3391366 | MS.gene009404:intron | 20.0% |
| !! | ATTATTTGTGCAGTATATAT+GGG | + | chr3.4:3392107-3392126 | MS.gene009404:intron | 20.0% |
| !! | ATTGAATTTACATATATCAG+TGG | + | chr3.4:3392554-3392573 | MS.gene009404:intron | 20.0% |
| !! | GATTATCTAAGAACAAATAT+AGG | - | chr3.4:3393234-3393253 | None:intergenic | 20.0% |
| !! | GCATACCTATTATAAAAATA+TGG | + | chr3.4:3391069-3391088 | MS.gene009404:intron | 20.0% |
| !! | GGATTCAAGTAATAAAATAT+TGG | - | chr3.4:3395717-3395736 | None:intergenic | 20.0% |
| !! | GTATATAAAAAGCTTTCAAA+CGG | + | chr3.4:3393590-3393609 | MS.gene009404:intron | 20.0% |
| !! | TAATATAAGGATATAACGAT+CGG | - | chr3.4:3394751-3394770 | None:intergenic | 20.0% |
| !! | TCAAGTTCAACTTAAAATTA+TGG | - | chr3.4:3395738-3395757 | None:intergenic | 20.0% |
| !! | TGTAATTAAGATAGATTTAG+AGG | + | chr3.4:3391211-3391230 | MS.gene009404:intron | 20.0% |
| !!! | AATCTAAACTTTGGTAATTT+GGG | + | chr3.4:3391095-3391114 | MS.gene009404:intron | 20.0% |
| !!! | AATTGACTTCATTTTATCTT+TGG | - | chr3.4:3392278-3392297 | None:intergenic | 20.0% |
| !!! | ATGTTGTTAGTGATTTTTTT+TGG | + | chr3.4:3395846-3395865 | MS.gene009404:intron | 20.0% |
| !!! | ATTCTTGTTATTTGCATAAA+GGG | + | chr3.4:3391392-3391411 | MS.gene009404:intron | 20.0% |
| !!! | GTTGTTTTCATAAGTTATAA+TGG | + | chr3.4:3392311-3392330 | MS.gene009404:intron | 20.0% |
| !!! | GTTTTCTCTAATTTTGTAAA+CGG | + | chr3.4:3395882-3395901 | MS.gene009404:intron | 20.0% |
| !!! | TATCTTTTAGAATGAAATTC+AGG | - | chr3.4:3395528-3395547 | None:intergenic | 20.0% |
| !!! | TATTCTTGTTATTTGCATAA+AGG | + | chr3.4:3391391-3391410 | MS.gene009404:intron | 20.0% |
| !!! | TATTTTCATTGTTCCATATT+AGG | + | chr3.4:3391763-3391782 | MS.gene009404:intron | 20.0% |
| !!! | TTCTAGAAATATAAATGGTA+CGG | - | chr3.4:3394078-3394097 | None:intergenic | 20.0% |
| !!! | TTCTTCTGAATTTTATTCTA+CGG | + | chr3.4:3391698-3391717 | MS.gene009404:intron | 20.0% |
| !!! | TTTTCTGGAAATGATTATTT+AGG | + | chr3.4:3391601-3391620 | MS.gene009404:CDS | 20.0% |
| !!! | TTTTGAATTTAAAGAACTTG+CGG | + | chr3.4:3392612-3392631 | MS.gene009404:intron | 20.0% |
| ! | AAGACAATAAATAGTAGAGT+GGG | - | chr3.4:3394126-3394145 | None:intergenic | 25.0% |
| ! | AAGTTATTAATACAGTCAAG+AGG | + | chr3.4:3394551-3394570 | MS.gene009404:CDS | 25.0% |
| ! | ACAAGAAAAAGAGGAAAAAA+AGG | - | chr3.4:3391490-3391509 | None:intergenic | 25.0% |
| ! | ACGATTGTAAAAAGAAATGA+TGG | - | chr3.4:3395074-3395093 | None:intergenic | 25.0% |
| ! | AGATAAATAGAACTTATCAG+AGG | + | chr3.4:3395543-3395562 | MS.gene009404:intron | 25.0% |
| ! | ATATGGTTGAATCTAAACTT+TGG | + | chr3.4:3391086-3391105 | MS.gene009404:intron | 25.0% |
| ! | ATGAATAGTGAATTAAAGGA+TGG | + | chr3.4:3392660-3392679 | MS.gene009404:intron | 25.0% |
| ! | ATTTGAAAAAGAAAGAGGTA+AGG | + | chr3.4:3391876-3391895 | MS.gene009404:intron | 25.0% |
| ! | ATTTGATGTATTTCTTGAAC+AGG | + | chr3.4:3395416-3395435 | MS.gene009404:intron | 25.0% |
| ! | ATTTGTTCTTAGATAATCTC+TGG | + | chr3.4:3393236-3393255 | MS.gene009404:intron | 25.0% |
| ! | CATGTTACACAGATAATATA+AGG | - | chr3.4:3394764-3394783 | None:intergenic | 25.0% |
| ! | CCTAATGAATAGTGAATTAA+AGG | + | chr3.4:3392656-3392675 | MS.gene009404:intron | 25.0% |
| ! | CCTTTAATTCACTATTCATT+AGG | - | chr3.4:3392659-3392678 | None:intergenic | 25.0% |
| ! | GATTATTTGTGCAGTATATA+TGG | + | chr3.4:3392106-3392125 | MS.gene009404:intron | 25.0% |
| ! | GCAAGTTCTTTAAATTCAAA+AGG | - | chr3.4:3392613-3392632 | None:intergenic | 25.0% |
| ! | GTAATACTTAGATCTTCATT+GGG | - | chr3.4:3395346-3395365 | None:intergenic | 25.0% |
| ! | GTAATTATAAGCTATAAGAC+AGG | + | chr3.4:3390899-3390918 | MS.gene009404:intron | 25.0% |
| ! | TAATTCACTATTCATTAGGT+GGG | - | chr3.4:3392655-3392674 | None:intergenic | 25.0% |
| ! | TAGAAAAACTAGCAAATTTC+TGG | - | chr3.4:3396010-3396029 | None:intergenic | 25.0% |
| ! | TAGTGCAAAAGATAATTTAC+CGG | - | chr3.4:3390521-3390540 | None:intergenic | 25.0% |
| ! | TATCAGATAAATAGTTACTC+AGG | - | chr3.4:3394149-3394168 | None:intergenic | 25.0% |
| ! | TATTGAGAAATAGGAACAAA+TGG | - | chr3.4:3394703-3394722 | None:intergenic | 25.0% |
| ! | TCACAATGTCTATATATGTA+CGG | - | chr3.4:3392945-3392964 | None:intergenic | 25.0% |
| ! | TCACACATATCAAGTATTAA+GGG | - | chr3.4:3392461-3392480 | None:intergenic | 25.0% |
| ! | TGAATAGTGAATTAAAGGAT+GGG | + | chr3.4:3392661-3392680 | MS.gene009404:intron | 25.0% |
| ! | TGATGGTTCAAATATTTGTT+CGG | + | chr3.4:3395034-3395053 | MS.gene009404:intron | 25.0% |
| ! | TGTAATACTTAGATCTTCAT+TGG | - | chr3.4:3395347-3395366 | None:intergenic | 25.0% |
| ! | TTAATTCACTATTCATTAGG+TGG | - | chr3.4:3392656-3392675 | None:intergenic | 25.0% |
| ! | TTATTTGTGCAGTATATATG+GGG | + | chr3.4:3392108-3392127 | MS.gene009404:intron | 25.0% |
| ! | TTCACACATATCAAGTATTA+AGG | - | chr3.4:3392462-3392481 | None:intergenic | 25.0% |
| ! | TTCATTCATGTGATGTATAA+TGG | - | chr3.4:3393703-3393722 | None:intergenic | 25.0% |
| ! | TTTGAATTTAAAGAACTTGC+GGG | + | chr3.4:3392613-3392632 | MS.gene009404:intron | 25.0% |
| ! | TTTGTGTTCTGTTATGATTT+CGG | + | chr3.4:3391450-3391469 | MS.gene009404:intron | 25.0% |
| ! | TTTGTTCTTAGATAATCTCT+GGG | + | chr3.4:3393237-3393256 | MS.gene009404:intron | 25.0% |
| !! | AAGAATCACTATACAGTTTT+TGG | + | chr3.4:3391988-3392007 | MS.gene009404:intron | 25.0% |
| !! | AAGTTATAATGGAGAGTTTA+TGG | + | chr3.4:3392322-3392341 | MS.gene009404:intron | 25.0% |
| !! | AATTTTATTGAAGATCACAG+AGG | - | chr3.4:3393638-3393657 | None:intergenic | 25.0% |
| !! | AGAATCACTATACAGTTTTT+GGG | + | chr3.4:3391989-3392008 | MS.gene009404:intron | 25.0% |
| !! | ATGATGTGTTGTTATGTATA+TGG | + | chr3.4:3393986-3394005 | MS.gene009404:intron | 25.0% |
| !! | ATGGATTTTAAACCAAAAAC+AGG | - | chr3.4:3392723-3392742 | None:intergenic | 25.0% |
| !! | GAATCTAAACTTTGGTAATT+TGG | + | chr3.4:3391094-3391113 | MS.gene009404:intron | 25.0% |
| !! | GCATTGTGAACTATAATTTT+GGG | + | chr3.4:3396163-3396182 | MS.gene009404:intron | 25.0% |
| !! | TCTTCTGAATTTTATTCTAC+GGG | + | chr3.4:3391699-3391718 | MS.gene009404:intron | 25.0% |
| !! | TGCATTGTGAACTATAATTT+TGG | + | chr3.4:3396162-3396181 | MS.gene009404:intron | 25.0% |
| !!! | AGAAGATATTTTTACAGTGA+TGG | + | chr3.4:3393789-3393808 | MS.gene009404:intron | 25.0% |
| !!! | ATATATGTTTTTTGGTTACC+TGG | + | chr3.4:3392150-3392169 | MS.gene009404:intron | 25.0% |
| !!! | ATGGTAAATGTTTTGCTTTT+TGG | - | chr3.4:3394684-3394703 | None:intergenic | 25.0% |
| !!! | TATATGTTTTTTGGTTACCT+GGG | + | chr3.4:3392151-3392170 | MS.gene009404:intron | 25.0% |
| !!! | TATTATTTTAAGCCCTTCTT+AGG | - | chr3.4:3394038-3394057 | None:intergenic | 25.0% |
| !!! | TCAAGGTGATATATGTTTTT+TGG | + | chr3.4:3392142-3392161 | MS.gene009404:intron | 25.0% |
| !!! | TGAACTATAATTTTGGGTTA+TGG | + | chr3.4:3396169-3396188 | MS.gene009404:intron | 25.0% |
| !!! | TGGTTTTGAAATTAACGTTA+AGG | + | chr3.4:3394409-3394428 | MS.gene009404:intron | 25.0% |
| !!! | TTTTTTTCCTCTTTTTCTTG+TGG | + | chr3.4:3391489-3391508 | MS.gene009404:intron | 25.0% |
| AAAGACTTTCATTTGCTTAC+AGG | + | chr3.4:3395209-3395228 | MS.gene009404:CDS | 30.0% | |
| AAAGATAATTTACCGGAACT+TGG | - | chr3.4:3390514-3390533 | None:intergenic | 30.0% | |
| AAATAAAAATGTGCGTTTCC+AGG | + | chr3.4:3394233-3394252 | MS.gene009404:intron | 30.0% | |
| AACAAAACCAGAACAGTTTA+AGG | - | chr3.4:3391919-3391938 | None:intergenic | 30.0% | |
| AACAAATGCAATAAGGGAAA+AGG | + | chr3.4:3393744-3393763 | MS.gene009404:intron | 30.0% | |
| AAGAAATGTTTGGTATGTGA+TGG | + | chr3.4:3395017-3395036 | MS.gene009404:intron | 30.0% | |
| AAGATAATTTACCGGAACTT+GGG | - | chr3.4:3390513-3390532 | None:intergenic | 30.0% | |
| AATAGTCAAATCTATGCTAG+TGG | + | chr3.4:3393409-3393428 | MS.gene009404:intron | 30.0% | |
| AATGTTCAAACTAGGACATA+AGG | - | chr3.4:3392073-3392092 | None:intergenic | 30.0% | |
| ACATTTGTTTGTGGCAAAAA+TGG | + | chr3.4:3394264-3394283 | MS.gene009404:CDS | 30.0% | |
| ACTTATTTGAGCTTATCAAC+TGG | - | chr3.4:3392425-3392444 | None:intergenic | 30.0% | |
| ACTTTGCAACAAATGCAATA+AGG | + | chr3.4:3393737-3393756 | MS.gene009404:intron | 30.0% | |
| AGCAAAATATGTCTTCTCTT+TGG | + | chr3.4:3394171-3394190 | MS.gene009404:intron | 30.0% | |
| AGCATGATCTTATAGATTAG+TGG | + | chr3.4:3394816-3394835 | MS.gene009404:intron | 30.0% | |
| ATTATGACCCACAATAAGTT+TGG | + | chr3.4:3396083-3396102 | MS.gene009404:intron | 30.0% | |
| CATAAATCATAACAGAACAC+AGG | - | chr3.4:3391237-3391256 | None:intergenic | 30.0% | |
| CTACATTGAGTTTATTGTGT+TGG | - | chr3.4:3390957-3390976 | None:intergenic | 30.0% | |
| CTTAAAACAACTTATGCTCA+TGG | + | chr3.4:3392352-3392371 | MS.gene009404:intron | 30.0% | |
| CTTTGCAACAAATGCAATAA+GGG | + | chr3.4:3393738-3393757 | MS.gene009404:intron | 30.0% | |
| GAAAGAAAGGTAAAAGATGT+AGG | - | chr3.4:3396236-3396255 | None:intergenic | 30.0% | |
| GAACAAAACAAACCAATAAG+AGG | - | chr3.4:3393942-3393961 | None:intergenic | 30.0% | |
| GAAGACAATAAATAGTAGAG+TGG | - | chr3.4:3394127-3394146 | None:intergenic | 30.0% | |
| GATGCAAAGAAAGAAATGTT+TGG | + | chr3.4:3395007-3395026 | MS.gene009404:intron | 30.0% | |
| GTGGATATACCAATTATCAT+AGG | + | chr3.4:3391831-3391850 | MS.gene009404:CDS | 30.0% | |
| TAGTATAGACTGTACCAAAA+GGG | - | chr3.4:3393039-3393058 | None:intergenic | 30.0% | |
| TATTTGTGCAGTATATATGG+GGG | + | chr3.4:3392109-3392128 | MS.gene009404:intron | 30.0% | |
| TGAATTTCTCGATGTAAATG+TGG | + | chr3.4:3393478-3393497 | MS.gene009404:intron | 30.0% | |
| TGCAAATAACAAGAATAGAG+CGG | - | chr3.4:3391388-3391407 | None:intergenic | 30.0% | |
| TGCAAGTACATTATATAGGA+TGG | - | chr3.4:3393524-3393543 | None:intergenic | 30.0% | |
| TTAGGTGAAGAGATTGTTTA+TGG | + | chr3.4:3391517-3391536 | MS.gene009404:intron | 30.0% | |
| TTAGTATAGACTGTACCAAA+AGG | - | chr3.4:3393040-3393059 | None:intergenic | 30.0% | |
| TTCCAAGATACACGAATTTA+CGG | + | chr3.4:3396350-3396369 | MS.gene009404:CDS | 30.0% | |
| TTGTGTTCTGTTATGATTTC+GGG | + | chr3.4:3391451-3391470 | MS.gene009404:intron | 30.0% | |
| TTGTTCTTAGATAATCTCTG+GGG | + | chr3.4:3393238-3393257 | MS.gene009404:intron | 30.0% | |
| ! | AGAACTGGAAAATTTGTTCA+AGG | + | chr3.4:3393153-3393172 | MS.gene009404:intron | 30.0% |
| ! | CTCTAATTTTGTAAACGGTT+AGG | + | chr3.4:3395887-3395906 | MS.gene009404:intron | 30.0% |
| ! | TCAAGTATTAAGGGTTTGTT+TGG | - | chr3.4:3392452-3392471 | None:intergenic | 30.0% |
| ! | TGGAAAATTTGTTCAAGGTT+TGG | + | chr3.4:3393158-3393177 | MS.gene009404:intron | 30.0% |
| ! | TGGTTTAAAATCCATGCTAT+AGG | + | chr3.4:3392728-3392747 | MS.gene009404:intron | 30.0% |
| !! | ACTTATCAGAGGTGTTTAAA+TGG | + | chr3.4:3395554-3395573 | MS.gene009404:intron | 30.0% |
| !! | CTTATCAGAGGTGTTTAAAT+GGG | + | chr3.4:3395555-3395574 | MS.gene009404:intron | 30.0% |
| !!! | AACTGTTCTGGTTTTGTTAT+TGG | + | chr3.4:3391921-3391940 | MS.gene009404:intron | 30.0% |
| !!! | ATATGTTTTTTGGTTACCTG+GGG | + | chr3.4:3392152-3392171 | MS.gene009404:intron | 30.0% |
| AAAAAGAAAGAGGTAAGGAC+TGG | + | chr3.4:3391881-3391900 | MS.gene009404:intron | 35.0% | |
| AAAACAGAGGCAAGAAAGAA+AGG | - | chr3.4:3396249-3396268 | None:intergenic | 35.0% | |
| AAAGGTAAAAGATGTAGGCA+TGG | - | chr3.4:3396231-3396250 | None:intergenic | 35.0% | |
| AAATGCAATAAGGGAAAAGG+AGG | + | chr3.4:3393747-3393766 | MS.gene009404:intron | 35.0% | |
| AAATTCGTGAAACCACGTTT+AGG | + | chr3.4:3390470-3390489 | MS.gene009404:CDS | 35.0% | |
| AACAGGCATTTATTACAAGC+TGG | + | chr3.4:3395433-3395452 | MS.gene009404:intron | 35.0% | |
| AAGGATGTGGATATTTGCAT+TGG | + | chr3.4:3394318-3394337 | MS.gene009404:CDS | 35.0% | |
| AATAAAAGCTACTAACCTGC+AGG | - | chr3.4:3395503-3395522 | None:intergenic | 35.0% | |
| AATATGAAGAGCAGATCAGA+TGG | + | chr3.4:3391145-3391164 | MS.gene009404:intron | 35.0% | |
| AATCACGCGTCAATAATTGA+TGG | + | chr3.4:3392885-3392904 | MS.gene009404:CDS | 35.0% | |
| AATCTCACCACAAGAAAAAG+AGG | - | chr3.4:3391499-3391518 | None:intergenic | 35.0% | |
| AATTAGAGAAAACGAGACCA+TGG | - | chr3.4:3395875-3395894 | None:intergenic | 35.0% | |
| ACTAAGGTTAAGACCTAAGA+AGG | + | chr3.4:3394022-3394041 | MS.gene009404:intron | 35.0% | |
| AGATAATTTACCGGAACTTG+GGG | - | chr3.4:3390512-3390531 | None:intergenic | 35.0% | |
| AGTATAGACTGTACCAAAAG+GGG | - | chr3.4:3393038-3393057 | None:intergenic | 35.0% | |
| ATAAGCACGTGAGACTATTT+GGG | - | chr3.4:3392401-3392420 | None:intergenic | 35.0% | |
| ATACACTTCCAAACTGATGT+AGG | + | chr3.4:3396035-3396054 | MS.gene009404:intron | 35.0% | |
| ATTAGAGATCAAGAGAGAGT+AGG | + | chr3.4:3391042-3391061 | MS.gene009404:intron | 35.0% | |
| ATTGTTTATGGTGCAGTTTC+TGG | + | chr3.4:3391529-3391548 | MS.gene009404:CDS | 35.0% | |
| CAAATATGTCATTCTCACAG+AGG | - | chr3.4:3395105-3395124 | None:intergenic | 35.0% | |
| CAATTGTTAGAAGCAGAAGA+AGG | + | chr3.4:3391177-3391196 | MS.gene009404:intron | 35.0% | |
| CGGATGCAAGTACATTATAT+AGG | - | chr3.4:3393528-3393547 | None:intergenic | 35.0% | |
| CTAAGGTTAAGACCTAAGAA+GGG | + | chr3.4:3394023-3394042 | MS.gene009404:intron | 35.0% | |
| CTAATAAAGCCACATCTTTC+TGG | + | chr3.4:3395956-3395975 | MS.gene009404:intron | 35.0% | |
| CTTCATATTGTGGTATTTGC+AGG | - | chr3.4:3391134-3391153 | None:intergenic | 35.0% | |
| CTTCTTCTGCTTCTAACAAT+TGG | - | chr3.4:3391179-3391198 | None:intergenic | 35.0% | |
| GAAAAATTGTGATAACCGAC+AGG | + | chr3.4:3393105-3393124 | MS.gene009404:CDS | 35.0% | |
| GATCAAGCAATGTTCAAACT+AGG | - | chr3.4:3392081-3392100 | None:intergenic | 35.0% | |
| GATGATGTAAGACCTCTTAT+TGG | + | chr3.4:3393927-3393946 | MS.gene009404:intron | 35.0% | |
| GGCAGATTTGAAAAAGAAAG+AGG | + | chr3.4:3391871-3391890 | MS.gene009404:CDS | 35.0% | |
| GTTGCTTGCATTCACAATAT+TGG | + | chr3.4:3394859-3394878 | MS.gene009404:intron | 35.0% | |
| GTTTGAACATTGCTTGATCT+TGG | + | chr3.4:3392082-3392101 | MS.gene009404:intron | 35.0% | |
| GTTTGATGAAATGCAGCAAT+GGG | + | chr3.4:3390426-3390445 | MS.gene009404:CDS | 35.0% | |
| TACACTTCCAAACTGATGTA+GGG | + | chr3.4:3396036-3396055 | MS.gene009404:intron | 35.0% | |
| TAGTAGAGTGGGTAATTACT+TGG | - | chr3.4:3394115-3394134 | None:intergenic | 35.0% | |
| TATAGTTCACAATGCACATC+AGG | - | chr3.4:3396158-3396177 | None:intergenic | 35.0% | |
| TATCAACTCAAGTACAACAC+TGG | - | chr3.4:3394640-3394659 | None:intergenic | 35.0% | |
| TATTGTGGGTCATAATTGCA+TGG | - | chr3.4:3396079-3396098 | None:intergenic | 35.0% | |
| TGAATTCTTATAGCACATCG+TGG | + | chr3.4:3394528-3394547 | MS.gene009404:intron | 35.0% | |
| TGCTACTAGTGAAATAGAAC+TGG | + | chr3.4:3393138-3393157 | MS.gene009404:intron | 35.0% | |
| TGTTTGATGAAATGCAGCAA+TGG | + | chr3.4:3390425-3390444 | MS.gene009404:CDS | 35.0% | |
| TTAGAGATCAAGAGAGAGTA+GGG | + | chr3.4:3391043-3391062 | MS.gene009404:intron | 35.0% | |
| TTTCCAAATCTTCCCTTGTA+TGG | - | chr3.4:3396298-3396317 | None:intergenic | 35.0% | |
| TTTGTTTGTGGCAAAAATGG+TGG | + | chr3.4:3394267-3394286 | MS.gene009404:CDS | 35.0% | |
| ! | AAAAGGTATGTGACTCCATT+AGG | - | chr3.4:3392596-3392615 | None:intergenic | 35.0% |
| ! | AAACTCACAAGAGTGTATTG+AGG | - | chr3.4:3392977-3392996 | None:intergenic | 35.0% |
| ! | AAGTACTCTGAGAGAATCAA+GGG | - | chr3.4:3390350-3390369 | None:intergenic | 35.0% |
| ! | ATATGATGGGACTTGTAACA+GGG | - | chr3.4:3395238-3395257 | None:intergenic | 35.0% |
| ! | ATGAAATGCTGACCTGTTTT+TGG | + | chr3.4:3392708-3392727 | MS.gene009404:intron | 35.0% |
| ! | ATGACAGCAATTGGAAGTAT+TGG | + | chr3.4:3392795-3392814 | MS.gene009404:CDS | 35.0% |
| ! | CTTTTTCTTGTGGTGAGATT+AGG | + | chr3.4:3391499-3391518 | MS.gene009404:intron | 35.0% |
| ! | GCAATCTTTTCATCATCTGA+AGG | - | chr3.4:3392846-3392865 | None:intergenic | 35.0% |
| ! | TATATTTTCAACTGCTACGC+CGG | + | chr3.4:3394583-3394602 | MS.gene009404:CDS | 35.0% |
| ! | TATTATAGGTGATGACGTGT+TGG | - | chr3.4:3390622-3390641 | None:intergenic | 35.0% |
| ! | TTATGTTTCTGCACTACATC+AGG | + | chr3.4:3394453-3394472 | MS.gene009404:intron | 35.0% |
| ! | TTATTGCAGCTTGTTTAGCA+TGG | + | chr3.4:3393836-3393855 | MS.gene009404:intron | 35.0% |
| ! | TTCTTTCTTGCCTCTGTTTT+AGG | + | chr3.4:3396249-3396268 | MS.gene009404:intron | 35.0% |
| !! | ATGTGGCTTTATTAGTAGTG+AGG | - | chr3.4:3395951-3395970 | None:intergenic | 35.0% |
| !! | TGTGGCTTTATTAGTAGTGA+GGG | - | chr3.4:3395950-3395969 | None:intergenic | 35.0% |
| !!! | CTTATTTTTGGGATAGACCA+AGG | - | chr3.4:3396114-3396133 | None:intergenic | 35.0% |
| !!! | GCTAGTGAATTTTTTGGCTA+GGG | - | chr3.4:3395659-3395678 | None:intergenic | 35.0% |
| !!! | GTGATTTTTTTTGGTGTCCA+TGG | + | chr3.4:3395855-3395874 | MS.gene009404:intron | 35.0% |
| !!! | TATGTTTTTTGGTTACCTGG+GGG | + | chr3.4:3392153-3392172 | MS.gene009404:intron | 35.0% |
| !!! | TGTCTGGCTAGTGAATTTTT+TGG | - | chr3.4:3395665-3395684 | None:intergenic | 35.0% |
| AAAACAACAACAATTCCCCC+AGG | - | chr3.4:3392171-3392190 | None:intergenic | 40.0% | |
| AACGATCGGTATGAAGGATA+AGG | - | chr3.4:3394737-3394756 | None:intergenic | 40.0% | |
| AAGAAGGCAATCCTATAGCA+TGG | - | chr3.4:3392742-3392761 | None:intergenic | 40.0% | |
| AAGATCATGCTAGAAGTGAG+AGG | - | chr3.4:3394807-3394826 | None:intergenic | 40.0% | |
| AAGTGCATGGTGGCAAAAAT+GGG | + | chr3.4:3390306-3390325 | MS.gene009404:CDS | 40.0% | |
| ACAAAAAGCCATGCTTCTTG+CGG | - | chr3.4:3393899-3393918 | None:intergenic | 40.0% | |
| ACGATCGGTATGAAGGATAA+GGG | - | chr3.4:3394736-3394755 | None:intergenic | 40.0% | |
| ACTGTACCAAAAGGGGAATA+GGG | - | chr3.4:3393031-3393050 | None:intergenic | 40.0% | |
| ACTTCCAATTGCTGTCATCA+AGG | - | chr3.4:3392793-3392812 | None:intergenic | 40.0% | |
| AGATCATGCTAGAAGTGAGA+GGG | - | chr3.4:3394806-3394825 | None:intergenic | 40.0% | |
| AGCCGTAAATTCGTGTATCT+TGG | - | chr3.4:3396355-3396374 | None:intergenic | 40.0% | |
| AGCGACTAAAGGATAGAGTA+AGG | + | chr3.4:3395785-3395804 | MS.gene009404:intron | 40.0% | |
| AGGATAGAGTAAGGGATAAC+TGG | + | chr3.4:3395794-3395813 | MS.gene009404:intron | 40.0% | |
| AGGTTAGGCCAAACTTATTG+TGG | - | chr3.4:3396094-3396113 | None:intergenic | 40.0% | |
| AGTCCATACAAGGGAAGATT+TGG | + | chr3.4:3396292-3396311 | MS.gene009404:CDS | 40.0% | |
| AGTGGGTAATTACTTGGAGT+GGG | - | chr3.4:3394109-3394128 | None:intergenic | 40.0% | |
| ATATTGGCAGCAAATCCTGT+AGG | - | chr3.4:3392768-3392787 | None:intergenic | 40.0% | |
| ATGCATCCATTTCCTAAACG+TGG | - | chr3.4:3390485-3390504 | None:intergenic | 40.0% | |
| ATTAGGCAGCTCAAGAACAT+GGG | + | chr3.4:3391780-3391799 | MS.gene009404:intron | 40.0% | |
| ATTGATGCAATTCGAGAGTG+CGG | - | chr3.4:3396330-3396349 | None:intergenic | 40.0% | |
| CAAATCCTGTAGGACAAAGA+AGG | - | chr3.4:3392758-3392777 | None:intergenic | 40.0% | |
| CAATAAGTTTGGCCTAACCT+TGG | + | chr3.4:3396094-3396113 | MS.gene009404:intron | 40.0% | |
| CAATACCAATACCAAGTGCA+TGG | + | chr3.4:3390293-3390312 | MS.gene009404:CDS | 40.0% | |
| CATAAGCACGTGAGACTATT+TGG | - | chr3.4:3392402-3392421 | None:intergenic | 40.0% | |
| CATTGGGCACCAAAAATGAT+GGG | - | chr3.4:3395330-3395349 | None:intergenic | 40.0% | |
| CCAACGATAAGGGATATGAT+GGG | - | chr3.4:3395251-3395270 | None:intergenic | 40.0% | |
| CTCTAGCTGCCTATGATAAT+TGG | - | chr3.4:3391843-3391862 | None:intergenic | 40.0% | |
| CTGATCTGCTCTTCATATTG+TGG | - | chr3.4:3391144-3391163 | None:intergenic | 40.0% | |
| CTTAGGTCTTAACCTTAGTC+CGG | - | chr3.4:3394021-3394040 | None:intergenic | 40.0% | |
| GACTGCTTGAGTTCATATGA+AGG | + | chr3.4:3394881-3394900 | MS.gene009404:intron | 40.0% | |
| GAGAACTCCTTAAACTGTTC+TGG | + | chr3.4:3391909-3391928 | MS.gene009404:intron | 40.0% | |
| GATGTTACAAGACTGAGTGT+TGG | + | chr3.4:3390923-3390942 | MS.gene009404:intron | 40.0% | |
| GCAAATGAAAGTCTTTCACC+CGG | - | chr3.4:3395205-3395224 | None:intergenic | 40.0% | |
| GCGACTAAAGGATAGAGTAA+GGG | + | chr3.4:3395786-3395805 | MS.gene009404:intron | 40.0% | |
| GGATATAACGATCGGTATGA+AGG | - | chr3.4:3394743-3394762 | None:intergenic | 40.0% | |
| GGTTAGGCCAAACTTATTGT+GGG | - | chr3.4:3396093-3396112 | None:intergenic | 40.0% | |
| GTAAACTATCTGTGTACACG+TGG | + | chr3.4:3394389-3394408 | MS.gene009404:intron | 40.0% | |
| GTGAAACCACGTTTAGGAAA+TGG | + | chr3.4:3390476-3390495 | MS.gene009404:CDS | 40.0% | |
| GTGGAAATGGTAGATGAGAA+AGG | + | chr3.4:3391004-3391023 | MS.gene009404:intron | 40.0% | |
| GTTCAATTGTGAGAAGGATG+TGG | + | chr3.4:3394305-3394324 | MS.gene009404:CDS | 40.0% | |
| TAGAGATCAAGAGAGAGTAG+GGG | + | chr3.4:3391044-3391063 | MS.gene009404:intron | 40.0% | |
| TAGCAGAATGACTAACCTGT+CGG | - | chr3.4:3393123-3393142 | None:intergenic | 40.0% | |
| TATTAGGCAGCTCAAGAACA+TGG | + | chr3.4:3391779-3391798 | MS.gene009404:intron | 40.0% | |
| TCATTGGGCACCAAAAATGA+TGG | - | chr3.4:3395331-3395350 | None:intergenic | 40.0% | |
| TGAAGATGAGAATGCTATGC+TGG | + | chr3.4:3390977-3390996 | MS.gene009404:intron | 40.0% | |
| TGAGGAGTTCAATTGTGAGA+AGG | + | chr3.4:3394299-3394318 | MS.gene009404:CDS | 40.0% | |
| TGCAAGCTATAAATCCTCCA+TGG | - | chr3.4:3394368-3394387 | None:intergenic | 40.0% | |
| TGTGAATGCAAGCAACAATC+AGG | - | chr3.4:3394855-3394874 | None:intergenic | 40.0% | |
| TGTTCTTGAGCTGCCTAATA+TGG | - | chr3.4:3391779-3391798 | None:intergenic | 40.0% | |
| TTAGGTCTTAACCTTAGTCC+GGG | - | chr3.4:3394020-3394039 | None:intergenic | 40.0% | |
| TTGACTGAGTCATTTGTGTC+TGG | - | chr3.4:3395681-3395700 | None:intergenic | 40.0% | |
| ! | AAGTCTTATCACACTAGGTG+GGG | - | chr3.4:3391297-3391316 | None:intergenic | 40.0% |
| ! | AATTAGTGGATCACACGTGA+TGG | + | chr3.4:3393288-3393307 | MS.gene009404:intron | 40.0% |
| ! | ACTTTCCCTCCCATCATTTT+TGG | + | chr3.4:3395318-3395337 | MS.gene009404:intron | 40.0% |
| ! | ATGGAGGATTTATAGCTTGC+AGG | + | chr3.4:3394367-3394386 | MS.gene009404:CDS | 40.0% |
| ! | CAAGCATTGTCTCTTCTCTA+CGG | - | chr3.4:3393548-3393567 | None:intergenic | 40.0% |
| ! | CAAGTCTTATCACACTAGGT+GGG | - | chr3.4:3391298-3391317 | None:intergenic | 40.0% |
| ! | GAAGTACTCTGAGAGAATCA+AGG | - | chr3.4:3390351-3390370 | None:intergenic | 40.0% |
| ! | GATATGATGGGACTTGTAAC+AGG | - | chr3.4:3395239-3395258 | None:intergenic | 40.0% |
| ! | GCTTTATTAGTAGTGAGGGT+GGG | - | chr3.4:3395946-3395965 | None:intergenic | 40.0% |
| ! | TCACAAGAGTGTATTGAGGT+GGG | - | chr3.4:3392973-3392992 | None:intergenic | 40.0% |
| ! | TCTTTCTGGAAGTGCACAAT+CGG | + | chr3.4:3395970-3395989 | MS.gene009404:intron | 40.0% |
| ! | TTCATTCCCTATTCCCCTTT+TGG | + | chr3.4:3393022-3393041 | MS.gene009404:intron | 40.0% |
| ! | TTTCTGGTGATGATGAAGCA+GGG | + | chr3.4:3391545-3391564 | MS.gene009404:CDS | 40.0% |
| ! | TTTTCGTGAGAAGCGACTAA+AGG | + | chr3.4:3395774-3395793 | MS.gene009404:intron | 40.0% |
| !! | AGTATTGGTTCTCTCTTAGC+TGG | + | chr3.4:3392810-3392829 | MS.gene009404:CDS | 40.0% |
| !! | ATGATCAGCTTCTGAAGTAG+TGG | - | chr3.4:3395375-3395394 | None:intergenic | 40.0% |
| !! | ATGGCTGGACAGCTTATTTT+TGG | - | chr3.4:3396126-3396145 | None:intergenic | 40.0% |
| !! | ATGTATATGGTTCTGATCCC+CGG | + | chr3.4:3393999-3394018 | MS.gene009404:intron | 40.0% |
| !! | CATGCACTTGGTATTGGTAT+TGG | - | chr3.4:3390295-3390314 | None:intergenic | 40.0% |
| !! | GCTCGTAACTGTTTCTACAT+TGG | + | chr3.4:3395629-3395648 | MS.gene009404:intron | 40.0% |
| !! | GTATTGGTTCTCTCTTAGCT+GGG | + | chr3.4:3392811-3392830 | MS.gene009404:CDS | 40.0% |
| !! | TACAGGATTTGCTGCCAATA+TGG | + | chr3.4:3392767-3392786 | MS.gene009404:CDS | 40.0% |
| !! | TGGCTGGACAGCTTATTTTT+GGG | - | chr3.4:3396125-3396144 | None:intergenic | 40.0% |
| !!! | GGCTAGTGAATTTTTTGGCT+AGG | - | chr3.4:3395660-3395679 | None:intergenic | 40.0% |
| !!! | TTTTGGGATAGACCAAGGTT+AGG | - | chr3.4:3396109-3396128 | None:intergenic | 40.0% |
| AAACAAATGTCCCATGAGCC+TGG | - | chr3.4:3394254-3394273 | None:intergenic | 45.0% | |
| AATAAGCTGTCCAGCCATTG+AGG | + | chr3.4:3396128-3396147 | MS.gene009404:intron | 45.0% | |
| ACACGAATTTACGGCTGCAA+TGG | + | chr3.4:3396359-3396378 | MS.gene009404:CDS | 45.0% | |
| ACATGAGACATGGCGTAGAA+AGG | + | chr3.4:3395169-3395188 | MS.gene009404:CDS | 45.0% | |
| ACCTCACGTTGGAGACAAAT+GGG | - | chr3.4:3390385-3390404 | None:intergenic | 45.0% | |
| ACTTCAGAAGCTGATCATGC+AGG | + | chr3.4:3395377-3395396 | MS.gene009404:intron | 45.0% | |
| ACTTCCAAACTGATGTAGGG+AGG | + | chr3.4:3396039-3396058 | MS.gene009404:intron | 45.0% | |
| AGAATGCTATGCTGGATGAG+TGG | + | chr3.4:3390985-3391004 | MS.gene009404:intron | 45.0% | |
| AGTTCTGCAAGCTCAACCAT+TGG | - | chr3.4:3393876-3393895 | None:intergenic | 45.0% | |
| ATGCATGATACCCCAAGTTC+CGG | + | chr3.4:3390499-3390518 | MS.gene009404:CDS | 45.0% | |
| ATGGGATCGTTCTTCTGTTG+AGG | + | chr3.4:3390444-3390463 | MS.gene009404:CDS | 45.0% | |
| ATGGGGGAAAGTGATGTTCA+AGG | + | chr3.4:3392125-3392144 | MS.gene009404:intron | 45.0% | |
| ATGGTATTCGTCTTGCTGAG+CGG | + | chr3.4:3392904-3392923 | MS.gene009404:CDS | 45.0% | |
| CAAATAAGAGCAGAACCCCT+TGG | - | chr3.4:3391812-3391831 | None:intergenic | 45.0% | |
| CAAGTGCATGGTGGCAAAAA+TGG | + | chr3.4:3390305-3390324 | MS.gene009404:CDS | 45.0% | |
| CATCATCATCTACCTCACGT+TGG | - | chr3.4:3390396-3390415 | None:intergenic | 45.0% | |
| CCACACAAGACATAACACAC+CGG | + | chr3.4:3390585-3390604 | MS.gene009404:intron | 45.0% | |
| CCACCTAGTGTGATAAGACT+TGG | + | chr3.4:3391296-3391315 | MS.gene009404:intron | 45.0% | |
| CCCATCATATCCCTTATCGT+TGG | + | chr3.4:3395248-3395267 | MS.gene009404:CDS | 45.0% | |
| CGGTGTGTTATGTCTTGTGT+GGG | - | chr3.4:3390587-3390606 | None:intergenic | 45.0% | |
| CTATGCTGGATGAGTGGAAA+TGG | + | chr3.4:3390991-3391010 | MS.gene009404:intron | 45.0% | |
| CTTCCAAACTGATGTAGGGA+GGG | + | chr3.4:3396040-3396059 | MS.gene009404:intron | 45.0% | |
| GACTGTACCAAAAGGGGAAT+AGG | - | chr3.4:3393032-3393051 | None:intergenic | 45.0% | |
| GAGTGGCAAAACATGAGACA+TGG | + | chr3.4:3395159-3395178 | MS.gene009404:CDS | 45.0% | |
| GAGTGGGTAATTACTTGGAG+TGG | - | chr3.4:3394110-3394129 | None:intergenic | 45.0% | |
| GATTGCCTTCTTTGTCCTAC+AGG | + | chr3.4:3392750-3392769 | MS.gene009404:CDS | 45.0% | |
| GCCAACGATAAGGGATATGA+TGG | - | chr3.4:3395252-3395271 | None:intergenic | 45.0% | |
| GCTCATGGGACATTTGTTTG+TGG | + | chr3.4:3394255-3394274 | MS.gene009404:CDS | 45.0% | |
| GGTACACTAAGTAAAGCTGC+CGG | + | chr3.4:3394339-3394358 | MS.gene009404:CDS | 45.0% | |
| GTCTTCAGTGCCAACGATAA+GGG | - | chr3.4:3395261-3395280 | None:intergenic | 45.0% | |
| GTTCACAATGCACATCAGGT+CGG | - | chr3.4:3396154-3396173 | None:intergenic | 45.0% | |
| GTTTGTGGCAAAAATGGTGG+TGG | + | chr3.4:3394270-3394289 | MS.gene009404:CDS | 45.0% | |
| TACCAATACCAAGTGCATGG+TGG | + | chr3.4:3390296-3390315 | MS.gene009404:CDS | 45.0% | |
| TACCTCACGTTGGAGACAAA+TGG | - | chr3.4:3390386-3390405 | None:intergenic | 45.0% | |
| TAGGTCTTAACCTTAGTCCG+GGG | - | chr3.4:3394019-3394038 | None:intergenic | 45.0% | |
| TATAAATCCTCCATGGCAGC+CGG | - | chr3.4:3394361-3394380 | None:intergenic | 45.0% | |
| TGCTGTCATCAAGGCCATAT+TGG | - | chr3.4:3392784-3392803 | None:intergenic | 45.0% | |
| TGTCTTCAGTGCCAACGATA+AGG | - | chr3.4:3395262-3395281 | None:intergenic | 45.0% | |
| TGTGCACTTCCAGAAAGATG+TGG | - | chr3.4:3395968-3395987 | None:intergenic | 45.0% | |
| ! | AAATGATGGGAGGGAAAGTG+AGG | - | chr3.4:3395317-3395336 | None:intergenic | 45.0% |
| ! | AATGATGGGAGGGAAAGTGA+GGG | - | chr3.4:3395316-3395335 | None:intergenic | 45.0% |
| ! | AGGGGTTCTGCTCTTATTTG+TGG | + | chr3.4:3391812-3391831 | MS.gene009404:CDS | 45.0% |
| ! | ATGGCCTTGATGACAGCAAT+TGG | + | chr3.4:3392786-3392805 | MS.gene009404:CDS | 45.0% |
| ! | CAGCTTGTTTAGCATGGATG+GGG | + | chr3.4:3393842-3393861 | MS.gene009404:intron | 45.0% |
| ! | CAGTGATGGTGTGTGCATTA+TGG | + | chr3.4:3393803-3393822 | MS.gene009404:intron | 45.0% |
| ! | CATTTTTGCCACCATGCACT+TGG | - | chr3.4:3390307-3390326 | None:intergenic | 45.0% |
| ! | CCAAGTCTTATCACACTAGG+TGG | - | chr3.4:3391299-3391318 | None:intergenic | 45.0% |
| ! | CGACCAAGTCTTATCACACT+AGG | - | chr3.4:3391302-3391321 | None:intergenic | 45.0% |
| ! | CTCACAAGAGTGTATTGAGG+TGG | - | chr3.4:3392974-3392993 | None:intergenic | 45.0% |
| ! | GCAGCTTGTTTAGCATGGAT+GGG | + | chr3.4:3393841-3393860 | MS.gene009404:intron | 45.0% |
| ! | GGTAGATGATGATGCGTTTC+AGG | + | chr3.4:3390402-3390421 | MS.gene009404:CDS | 45.0% |
| ! | GTAGAAAGGCCATTTGGAAC+CGG | + | chr3.4:3395183-3395202 | MS.gene009404:CDS | 45.0% |
| ! | TAGAAAGGCCATTTGGAACC+GGG | + | chr3.4:3395184-3395203 | MS.gene009404:CDS | 45.0% |
| ! | TGCAGCTTGTTTAGCATGGA+TGG | + | chr3.4:3393840-3393859 | MS.gene009404:intron | 45.0% |
| ! | TTTTGCAGCTGCTGTTAGAG+TGG | + | chr3.4:3395142-3395161 | MS.gene009404:intron | 45.0% |
| !! | GGCTTTATTAGTAGTGAGGG+TGG | - | chr3.4:3395947-3395966 | None:intergenic | 45.0% |
| !! | GTTTCTGGTGATGATGAAGC+AGG | + | chr3.4:3391544-3391563 | MS.gene009404:CDS | 45.0% |
| !!! | GTGAATTTTTTGGCTAGGGC+AGG | - | chr3.4:3395655-3395674 | None:intergenic | 45.0% |
| !! | ATATAAAAAAAGATATTAAA+AGG | - | chr3.4:3390768-3390787 | None:intergenic | 5.0% |
| !! | TATAAAAAAAGATATTAAAA+GGG | - | chr3.4:3390767-3390786 | None:intergenic | 5.0% |
| !!! | ATATCTTTTTTTATATATAA+AGG | + | chr3.4:3390772-3390791 | MS.gene009404:intron | 5.0% |
| AAGAACATGGGATGGGACCA+AGG | + | chr3.4:3391792-3391811 | MS.gene009404:CDS | 50.0% | |
| AAGTCGAACATCACCAGGCA+CGG | + | chr3.4:3390706-3390725 | MS.gene009404:intron | 50.0% | |
| AATGTGCGTTTCCAGGCTCA+TGG | + | chr3.4:3394240-3394259 | MS.gene009404:intron | 50.0% | |
| ACCCATTTGTCTCCAACGTG+AGG | + | chr3.4:3390381-3390400 | MS.gene009404:CDS | 50.0% | |
| ACTAACCTGCAGGAGTTAGG+AGG | - | chr3.4:3395493-3395512 | None:intergenic | 50.0% | |
| AGAACATGGGATGGGACCAA+GGG | + | chr3.4:3391793-3391812 | MS.gene009404:CDS | 50.0% | |
| AGCCTTTCCAACAGTCGGAT+GGG | - | chr3.4:3391635-3391654 | None:intergenic | 50.0% | |
| ATGTGCGTTTCCAGGCTCAT+GGG | + | chr3.4:3394241-3394260 | MS.gene009404:intron | 50.0% | |
| CATGGCGTAGAAAGGCCATT+TGG | + | chr3.4:3395177-3395196 | MS.gene009404:CDS | 50.0% | |
| CCACTCGCAACCTAAAACAG+AGG | - | chr3.4:3396262-3396281 | None:intergenic | 50.0% | |
| CCGGTGTGTTATGTCTTGTG+TGG | - | chr3.4:3390588-3390607 | None:intergenic | 50.0% | |
| CCTCAGTGCAGTCCATACAA+GGG | + | chr3.4:3396283-3396302 | MS.gene009404:CDS | 50.0% | |
| CTTATCACACTAGGTGGGGT+TGG | - | chr3.4:3391293-3391312 | None:intergenic | 50.0% | |
| GACACAAGTCGAACATCACC+AGG | + | chr3.4:3390701-3390720 | MS.gene009404:intron | 50.0% | |
| GCAGCTCAAGAACATGGGAT+GGG | + | chr3.4:3391785-3391804 | MS.gene009404:CDS | 50.0% | |
| GCTACTAACCTGCAGGAGTT+AGG | - | chr3.4:3395496-3395515 | None:intergenic | 50.0% | |
| GGTACGGAATCTGTACTCGA+TGG | - | chr3.4:3394062-3394081 | None:intergenic | 50.0% | |
| GTCTTGCTGAGCGGCAAAAA+GGG | + | chr3.4:3392913-3392932 | MS.gene009404:CDS | 50.0% | |
| GTCTTTCACCCGGTTCCAAA+TGG | - | chr3.4:3395195-3395214 | None:intergenic | 50.0% | |
| GTGGCAAAAATGGGTCGAAG+AGG | + | chr3.4:3390315-3390334 | MS.gene009404:CDS | 50.0% | |
| GTGGTCTGATTGCAGTCACA+TGG | - | chr3.4:3395462-3395481 | None:intergenic | 50.0% | |
| TAGGCAGCTAGAGTCGAGTT+TGG | + | chr3.4:3391850-3391869 | MS.gene009404:CDS | 50.0% | |
| TCTTGCTGAGCGGCAAAAAG+GGG | + | chr3.4:3392914-3392933 | MS.gene009404:CDS | 50.0% | |
| TGCCACCATGCACTTGGTAT+TGG | - | chr3.4:3390301-3390320 | None:intergenic | 50.0% | |
| TGTTGGAAAGGCTGCTGCAA+AGG | + | chr3.4:3391642-3391661 | MS.gene009404:CDS | 50.0% | |
| TTCCCATCCGACTGTTGGAA+AGG | + | chr3.4:3391630-3391649 | MS.gene009404:CDS | 50.0% | |
| ! | CCTTGTATGGACTGCACTGA+GGG | - | chr3.4:3396285-3396304 | None:intergenic | 50.0% |
| ! | CGTGTTGGCATTGTCATGTC+CGG | - | chr3.4:3390607-3390626 | None:intergenic | 50.0% |
| ! | GGGCACCAAAAATGATGGGA+GGG | - | chr3.4:3395326-3395345 | None:intergenic | 50.0% |
| ! | TGGGCACCAAAAATGATGGG+AGG | - | chr3.4:3395327-3395346 | None:intergenic | 50.0% |
| !! | AAATGGTGGTGGTGTTGCTG+AGG | + | chr3.4:3394281-3394300 | MS.gene009404:CDS | 50.0% |
| !! | ACAAAGCACTGCAAGCAAGC+CGG | + | chr3.4:3395279-3395298 | MS.gene009404:CDS | 50.0% |
| !!! | CCTCTGTTTTAGGTTGCGAG+TGG | + | chr3.4:3396259-3396278 | MS.gene009404:intron | 50.0% |
| AGTGAGGGAGGGATGCATAC+CGG | - | chr3.4:3395301-3395320 | None:intergenic | 55.0% | |
| ATGGGAGGGAAAGTGAGGGA+GGG | - | chr3.4:3395312-3395331 | None:intergenic | 55.0% | |
| CAACAGTCGGATGGGAACTC+AGG | - | chr3.4:3391627-3391646 | None:intergenic | 55.0% | |
| CACACTCTGTAATCCGTGCC+TGG | - | chr3.4:3390722-3390741 | None:intergenic | 55.0% | |
| CAGCCTTTCCAACAGTCGGA+TGG | - | chr3.4:3391636-3391655 | None:intergenic | 55.0% | |
| CCCTCAGTGCAGTCCATACA+AGG | + | chr3.4:3396282-3396301 | MS.gene009404:CDS | 55.0% | |
| CGTCTTGCTGAGCGGCAAAA+AGG | + | chr3.4:3392912-3392931 | MS.gene009404:CDS | 55.0% | |
| CTGAGTTCCCATCCGACTGT+TGG | + | chr3.4:3391625-3391644 | MS.gene009404:CDS | 55.0% | |
| GAACATGGGATGGGACCAAG+GGG | + | chr3.4:3391794-3391813 | MS.gene009404:CDS | 55.0% | |
| GCAGAACTCCGCAAGAAGCA+TGG | + | chr3.4:3393888-3393907 | MS.gene009404:CDS | 55.0% | |
| GCAGCAGCCTTTCCAACAGT+CGG | - | chr3.4:3391640-3391659 | None:intergenic | 55.0% | |
| GCTCCCTCCCTACATCAGTT+TGG | - | chr3.4:3396046-3396065 | None:intergenic | 55.0% | |
| GGATGGGGACTTTGCACCAA+TGG | + | chr3.4:3393857-3393876 | MS.gene009404:CDS | 55.0% | |
| GGCAGCTCAAGAACATGGGA+TGG | + | chr3.4:3391784-3391803 | MS.gene009404:intron | 55.0% | |
| ! | CAGGAGTTAGGAGGCACAGT+TGG | - | chr3.4:3395484-3395503 | None:intergenic | 55.0% |
| ! | CCCTTGTATGGACTGCACTG+AGG | - | chr3.4:3396286-3396305 | None:intergenic | 55.0% |
| ! | GAGTTAGGAGGCACAGTTGG+TGG | - | chr3.4:3395481-3395500 | None:intergenic | 55.0% |
| !! | TGGTTCTGATCCCCGGACTA+AGG | + | chr3.4:3394006-3394025 | MS.gene009404:intron | 55.0% |
| ATCAGGTCGGCCTCAATGGC+TGG | - | chr3.4:3396141-3396160 | None:intergenic | 60.0% | |
| CCAGTTGCTGCTGCTGCTCA+TGG | + | chr3.4:3394608-3394627 | MS.gene009404:CDS | 60.0% | |
| CCATGAGCAGCAGCAGCAAC+TGG | - | chr3.4:3394611-3394630 | None:intergenic | 60.0% | |
| CTGTGCCTCCTAACTCCTGC+AGG | + | chr3.4:3395485-3395504 | MS.gene009404:CDS | 60.0% | |
| GATGGGAGGGAAAGTGAGGG+AGG | - | chr3.4:3395313-3395332 | None:intergenic | 60.0% | |
| GCACATCAGGTCGGCCTCAA+TGG | - | chr3.4:3396145-3396164 | None:intergenic | 60.0% | |
| GCAGCAGCAGCAACTGGAAC+CGG | - | chr3.4:3394605-3394624 | None:intergenic | 60.0% | |
| ! | AGTAAAGCTGCCGGCTGCCA+TGG | + | chr3.4:3394348-3394367 | MS.gene009404:CDS | 60.0% |
| ! | AAAGCTGCCGGCTGCCATGG+AGG | + | chr3.4:3394351-3394370 | MS.gene009404:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.4 | gene | 3390283 | 3396397 | 3390283 | ID=MS.gene009404 |
| chr3.4 | mRNA | 3390283 | 3396397 | 3390283 | ID=MS.gene009404.t1;Parent=MS.gene009404 |
| chr3.4 | exon | 3390283 | 3390520 | 3390283 | ID=MS.gene009404.t1.exon1;Parent=MS.gene009404.t1 |
| chr3.4 | CDS | 3390283 | 3390520 | 3390283 | ID=cds.MS.gene009404.t1;Parent=MS.gene009404.t1 |
| chr3.4 | exon | 3391521 | 3391663 | 3391521 | ID=MS.gene009404.t1.exon2;Parent=MS.gene009404.t1 |
| chr3.4 | CDS | 3391521 | 3391663 | 3391521 | ID=cds.MS.gene009404.t1;Parent=MS.gene009404.t1 |
| chr3.4 | exon | 3391785 | 3391892 | 3391785 | ID=MS.gene009404.t1.exon3;Parent=MS.gene009404.t1 |
| chr3.4 | CDS | 3391785 | 3391892 | 3391785 | ID=cds.MS.gene009404.t1;Parent=MS.gene009404.t1 |
| chr3.4 | exon | 3392750 | 3392988 | 3392750 | ID=MS.gene009404.t1.exon4;Parent=MS.gene009404.t1 |
| chr3.4 | CDS | 3392750 | 3392988 | 3392750 | ID=cds.MS.gene009404.t1;Parent=MS.gene009404.t1 |
| chr3.4 | exon | 3393085 | 3393126 | 3393085 | ID=MS.gene009404.t1.exon5;Parent=MS.gene009404.t1 |
| chr3.4 | CDS | 3393085 | 3393126 | 3393085 | ID=cds.MS.gene009404.t1;Parent=MS.gene009404.t1 |
| chr3.4 | exon | 3393845 | 3393932 | 3393845 | ID=MS.gene009404.t1.exon6;Parent=MS.gene009404.t1 |
| chr3.4 | CDS | 3393845 | 3393932 | 3393845 | ID=cds.MS.gene009404.t1;Parent=MS.gene009404.t1 |
| chr3.4 | exon | 3394255 | 3394388 | 3394255 | ID=MS.gene009404.t1.exon7;Parent=MS.gene009404.t1 |
| chr3.4 | CDS | 3394255 | 3394388 | 3394255 | ID=cds.MS.gene009404.t1;Parent=MS.gene009404.t1 |
| chr3.4 | exon | 3394541 | 3394629 | 3394541 | ID=MS.gene009404.t1.exon8;Parent=MS.gene009404.t1 |
| chr3.4 | CDS | 3394541 | 3394629 | 3394541 | ID=cds.MS.gene009404.t1;Parent=MS.gene009404.t1 |
| chr3.4 | exon | 3395150 | 3395300 | 3395150 | ID=MS.gene009404.t1.exon9;Parent=MS.gene009404.t1 |
| chr3.4 | CDS | 3395150 | 3395300 | 3395150 | ID=cds.MS.gene009404.t1;Parent=MS.gene009404.t1 |
| chr3.4 | exon | 3395438 | 3395506 | 3395438 | ID=MS.gene009404.t1.exon10;Parent=MS.gene009404.t1 |
| chr3.4 | CDS | 3395438 | 3395506 | 3395438 | ID=cds.MS.gene009404.t1;Parent=MS.gene009404.t1 |
| chr3.4 | exon | 3396271 | 3396397 | 3396271 | ID=MS.gene009404.t1.exon11;Parent=MS.gene009404.t1 |
| chr3.4 | CDS | 3396271 | 3396397 | 3396271 | ID=cds.MS.gene009404.t1;Parent=MS.gene009404.t1 |
| Gene Sequence |
| Protein sequence |
