AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene067859


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene067859.t1 MTR_7g086360 99.420 345 2 0 1 345 1 345 0.0 720
MS.gene067859.t1 MTR_4g119620 30.363 303 191 9 51 340 23 318 5.70e-38 138
MS.gene067859.t1 MTR_4g119620 28.137 263 172 7 46 301 69 321 4.04e-24 101
MS.gene067859.t1 MTR_1g072140 30.796 289 191 7 51 337 23 304 1.62e-34 129
MS.gene067859.t1 MTR_1g072140 27.778 270 174 9 41 301 55 312 1.79e-24 102
MS.gene067859.t1 MTR_3g075400 28.727 275 189 3 51 324 221 489 2.68e-29 118
MS.gene067859.t1 MTR_4g104380 27.941 272 191 2 51 322 226 492 1.20e-28 116
MS.gene067859.t1 MTR_4g104380 28.095 210 136 6 51 251 310 513 8.13e-16 78.6
MS.gene067859.t1 MTR_8g092620 27.425 299 198 7 47 340 10 294 6.09e-28 110
MS.gene067859.t1 MTR_8g092620 23.585 212 145 5 48 251 95 297 1.70e-11 64.7
MS.gene067859.t1 MTR_8g092620 27.244 312 204 8 38 340 4 301 7.71e-28 111
MS.gene067859.t1 MTR_1g054300 28.618 304 183 11 51 342 115 396 2.85e-27 112
MS.gene067859.t1 MTR_1g054300 26.621 293 162 7 51 301 200 481 9.61e-22 96.3
MS.gene067859.t1 MTR_1g054300 22.287 341 211 7 45 342 151 480 1.56e-19 89.7
MS.gene067859.t1 MTR_4g102520 26.730 318 220 9 32 340 268 581 9.12e-27 111
MS.gene067859.t1 MTR_6g004040 26.977 215 148 4 127 340 3 209 1.06e-25 108
MS.gene067859.t1 MTR_6g004040 25.969 258 172 7 51 302 12 256 1.10e-21 96.7
MS.gene067859.t1 MTR_6g004040 29.148 223 146 6 48 267 52 265 7.92e-17 82.0
MS.gene067859.t1 MTR_8g467040 26.948 308 205 9 51 344 115 416 2.96e-24 102
MS.gene067859.t1 MTR_3g106080 29.004 231 155 4 50 279 414 636 3.69e-24 103
MS.gene067859.t1 MTR_3g106080 28.333 240 154 5 86 320 407 633 4.12e-21 94.7
MS.gene067859.t1 MTR_3g106080 26.866 201 141 4 41 237 447 645 2.04e-16 80.9
MS.gene067859.t1 MTR_3g106080 23.902 205 144 4 142 345 423 616 1.00e-13 72.4
MS.gene067859.t1 MTR_2g012630 26.636 214 148 3 130 342 5 210 9.58e-24 102
MS.gene067859.t1 MTR_2g012630 26.267 217 148 5 113 327 31 237 1.46e-17 84.3
MS.gene067859.t1 MTR_2g012630 27.184 206 142 5 51 252 54 255 1.50e-11 66.2
MS.gene067859.t1 MTR_2g012630 26.636 214 148 3 130 342 5 210 9.90e-24 102
MS.gene067859.t1 MTR_2g012630 26.267 217 148 5 113 327 31 237 1.50e-17 84.3
MS.gene067859.t1 MTR_2g012630 27.184 206 142 5 51 252 54 255 1.46e-11 66.2
MS.gene067859.t1 MTR_5g022690 30.531 226 144 6 82 305 265 479 7.42e-23 99.4
MS.gene067859.t1 MTR_5g022690 25.962 208 150 4 46 251 270 475 1.34e-17 84.0
MS.gene067859.t1 MTR_5g022690 26.506 166 112 4 164 328 261 417 1.07e-12 69.3
MS.gene067859.t1 MTR_5g016350 27.481 262 168 7 51 302 331 580 1.20e-21 96.3
MS.gene067859.t1 MTR_5g016350 27.027 333 192 11 44 342 222 537 2.91e-21 95.1
MS.gene067859.t1 MTR_5g016350 22.517 302 193 8 58 340 297 576 9.11e-18 84.7
MS.gene067859.t1 MTR_5g016350 33.714 175 105 4 47 212 410 582 2.30e-15 77.4
MS.gene067859.t1 MTR_5g016350 27.481 262 168 7 51 302 267 516 1.85e-21 95.5
MS.gene067859.t1 MTR_5g016350 27.027 333 192 11 44 342 158 473 3.58e-21 94.7
MS.gene067859.t1 MTR_5g016350 22.517 302 193 8 58 340 233 512 1.53e-17 84.0
MS.gene067859.t1 MTR_5g016350 33.714 175 105 4 47 212 346 518 3.10e-15 77.0
MS.gene067859.t1 MTR_5g016370 26.994 326 199 11 44 342 236 549 5.95e-21 94.4
MS.gene067859.t1 MTR_5g016370 25.573 262 173 7 51 302 343 592 2.40e-20 92.4
MS.gene067859.t1 MTR_5g016370 32.000 175 108 4 47 212 422 594 8.76e-15 75.9
MS.gene067859.t1 MTR_1g097140 25.753 299 204 7 51 345 119 403 6.22e-21 93.2
MS.gene067859.t1 MTR_1g097140 25.238 210 150 4 48 254 199 404 4.45e-16 79.0
MS.gene067859.t1 MTR_4g095058 25.414 362 211 12 13 342 198 532 8.33e-21 94.0
MS.gene067859.t1 MTR_4g095058 23.954 263 176 8 51 302 326 575 3.05e-18 86.3
MS.gene067859.t1 MTR_4g095058 30.286 175 111 3 47 212 405 577 4.04e-14 73.6
MS.gene067859.t1 MTR_2g436510 25.071 351 215 12 3 341 119 433 9.44e-21 93.2
MS.gene067859.t1 MTR_2g436510 24.845 161 113 2 185 345 173 325 7.06e-13 69.7
MS.gene067859.t1 MTR_3g449990 23.355 304 212 11 48 342 263 554 1.08e-20 93.6
MS.gene067859.t1 MTR_1g072740 26.103 272 189 8 32 295 267 534 1.98e-20 92.8
MS.gene067859.t1 MTR_1g069345 25.733 307 199 9 50 342 211 502 2.59e-20 92.0
MS.gene067859.t1 MTR_4g095058 24.863 366 216 12 9 342 192 530 4.34e-20 91.7
MS.gene067859.t1 MTR_4g095058 23.954 263 176 8 51 302 324 573 3.62e-18 85.9
MS.gene067859.t1 MTR_4g095058 30.286 175 111 3 47 212 403 575 4.30e-14 73.6
MS.gene067859.t1 MTR_5g090420 22.848 302 215 10 48 342 257 547 8.27e-20 90.9
MS.gene067859.t1 MTR_6g005220 27.500 240 136 7 96 301 106 341 8.82e-20 90.5
MS.gene067859.t1 MTR_8g092620 28.037 214 141 5 48 256 11 216 5.08e-19 85.1
MS.gene067859.t1 MTR_8g092620 27.219 169 117 4 89 254 9 174 8.87e-11 61.6
MS.gene067859.t1 MTR_8g106790 29.348 276 164 13 47 301 55 320 3.50e-18 84.3
MS.gene067859.t1 MTR_8g106790 31.795 195 121 6 69 253 30 222 3.75e-18 84.3
MS.gene067859.t1 MTR_8g106790 25.991 227 146 9 113 328 31 246 6.04e-13 69.3
MS.gene067859.t1 MTR_3g045130 29.439 214 145 5 48 258 307 517 6.02e-18 85.1
MS.gene067859.t1 MTR_3g045130 25.000 224 158 4 106 328 280 494 2.36e-17 83.2
MS.gene067859.t1 MTR_3g045130 26.289 194 138 5 63 254 280 470 2.99e-11 64.7
MS.gene067859.t1 MTR_8g045440 25.588 340 189 13 61 342 29 362 9.61e-18 84.3
MS.gene067859.t1 MTR_8g038550 24.662 296 198 10 51 337 179 458 1.40e-17 84.3
MS.gene067859.t1 MTR_8g038550 24.806 258 177 8 49 301 219 464 7.04e-15 76.3
MS.gene067859.t1 MTR_8g045440 25.588 340 189 13 61 342 29 362 3.37e-17 82.8
MS.gene067859.t1 MTR_2g020720 24.927 341 197 11 56 340 107 444 5.11e-17 82.0
MS.gene067859.t1 MTR_2g019400 29.240 171 107 4 158 328 15 171 8.87e-17 79.7
MS.gene067859.t1 MTR_2g019400 21.839 261 175 6 61 301 1 252 1.58e-13 70.5
MS.gene067859.t1 MTR_2g019400 20.994 181 118 3 53 209 73 252 3.82e-11 63.2
MS.gene067859.t1 MTR_3g116500 29.434 265 157 11 60 301 2 259 1.20e-16 79.3
MS.gene067859.t1 MTR_3g116500 27.727 220 140 7 50 251 41 259 5.65e-16 77.4
MS.gene067859.t1 MTR_3g116500 29.588 267 158 11 58 301 110 369 1.56e-16 80.1
MS.gene067859.t1 MTR_3g116500 27.727 220 140 7 50 251 151 369 1.34e-15 77.4
MS.gene067859.t1 MTR_3g116500 21.786 280 195 8 51 312 61 334 1.36e-12 68.6
MS.gene067859.t1 MTR_4g071130 24.312 218 127 5 154 342 22 230 1.25e-15 78.6
MS.gene067859.t1 MTR_4g071130 23.188 276 181 7 91 340 2 272 6.74e-12 67.4
MS.gene067859.t1 MTR_4g071130 23.320 253 172 7 54 306 50 280 2.57e-11 65.5
MS.gene067859.t1 MTR_7g076230 23.288 292 206 9 45 320 359 648 1.66e-15 78.2
MS.gene067859.t1 MTR_7g076230 21.147 279 190 8 48 314 319 579 6.30e-14 73.2
MS.gene067859.t1 MTR_7g076230 24.324 185 131 3 163 345 349 526 2.10e-13 71.6
MS.gene067859.t1 MTR_1g089290 22.843 394 234 12 16 340 73 465 2.36e-15 77.4
MS.gene067859.t1 MTR_3g067940 24.057 212 155 3 48 255 248 457 2.55e-15 77.0
MS.gene067859.t1 MTR_1g050340 22.695 282 202 8 63 342 517 784 2.55e-15 77.4
MS.gene067859.t1 MTR_2g102267 26.190 210 150 4 55 260 59 267 2.76e-15 75.9
MS.gene067859.t1 MTR_1g050340 22.695 282 202 8 63 342 518 785 2.77e-15 77.4
MS.gene067859.t1 MTR_1g090827 24.424 217 124 6 154 340 22 228 4.41e-15 77.0
MS.gene067859.t1 MTR_1g090827 24.901 253 168 7 54 306 50 280 8.38e-12 67.0
MS.gene067859.t1 MTR_1g090827 22.656 256 167 6 113 342 24 274 1.50e-11 66.2
MS.gene067859.t1 MTR_4g123597 33.607 122 79 2 51 172 102 221 7.29e-15 76.3
MS.gene067859.t1 MTR_2g054920 26.000 300 160 9 92 342 10 296 8.29e-15 75.1
MS.gene067859.t1 MTR_4g105700 23.509 285 192 8 51 319 355 629 1.21e-14 75.5
MS.gene067859.t1 MTR_4g105700 27.950 161 113 3 50 209 495 653 1.35e-14 75.5
MS.gene067859.t1 MTR_8g045463 23.684 342 195 12 61 342 29 364 2.97e-14 73.9
MS.gene067859.t1 MTR_8g045470 23.684 342 195 12 61 342 29 364 2.97e-14 73.9
MS.gene067859.t1 MTR_2g016160 29.452 146 99 4 112 253 122 267 3.13e-14 72.8
MS.gene067859.t1 MTR_4g111810 21.843 293 212 6 58 342 70 353 3.34e-14 73.6
MS.gene067859.t1 MTR_4g111810 21.843 293 212 6 58 342 70 353 3.94e-14 73.2
MS.gene067859.t1 MTR_8g041740 23.669 338 198 12 61 342 29 362 6.44e-14 73.2
MS.gene067859.t1 MTR_8g027985 23.485 264 184 8 51 301 646 904 7.71e-14 73.2
MS.gene067859.t1 MTR_2g085210 26.087 253 175 7 58 301 568 817 8.96e-14 72.8
MS.gene067859.t1 MTR_1g081830 22.968 283 200 7 72 345 57 330 9.39e-14 72.8
MS.gene067859.t1 MTR_1g081830 22.508 311 218 8 49 345 1 302 9.76e-14 72.8
MS.gene067859.t1 MTR_4g125710 25.604 207 132 4 48 236 95 297 1.06e-13 71.2
MS.gene067859.t1 MTR_4g125710 23.197 319 203 8 53 342 12 317 5.50e-13 69.3
MS.gene067859.t1 MTR_2g034500 26.267 217 128 5 48 233 234 449 1.34e-13 72.4
MS.gene067859.t1 MTR_2g016690 24.473 237 159 6 47 270 85 314 2.13e-13 70.5
MS.gene067859.t1 MTR_2g016690 24.648 284 189 9 56 325 51 323 3.47e-13 70.1
MS.gene067859.t1 MTR_2g016690 23.891 293 188 10 69 342 22 298 8.90e-12 65.9
MS.gene067859.t1 MTR_3g061450 21.141 298 218 7 52 344 16 301 2.21e-13 70.5
MS.gene067859.t1 MTR_3g107910 22.222 288 209 7 56 342 629 902 2.26e-13 71.6
MS.gene067859.t1 MTR_4g077783 20.478 293 216 6 58 342 9 292 2.26e-13 71.2
MS.gene067859.t1 MTR_3g107910 22.222 288 209 7 56 342 622 895 2.34e-13 71.6
MS.gene067859.t1 MTR_1g011610 22.028 286 212 7 58 342 625 900 3.68e-13 70.9
MS.gene067859.t1 MTR_1g011610 25.523 239 159 9 94 326 618 843 2.16e-11 65.5
MS.gene067859.t1 MTR_1g021590 27.624 181 117 5 97 269 218 392 3.98e-13 70.5
MS.gene067859.t1 MTR_2g014020 21.053 342 247 11 7 342 198 522 4.16e-13 70.5
MS.gene067859.t1 MTR_1g087120 33.858 127 79 3 48 171 319 443 5.45e-13 70.9
MS.gene067859.t1 MTR_3g052220 30.952 126 86 1 54 179 263 387 6.45e-13 70.1
MS.gene067859.t1 MTR_3g052220 24.528 159 109 3 106 254 222 379 8.46e-13 69.7
MS.gene067859.t1 MTR_1g044720 25.573 262 178 9 48 301 257 509 7.87e-13 69.7
MS.gene067859.t1 MTR_8g092890 23.488 281 174 10 51 302 226 494 8.83e-13 69.7
MS.gene067859.t1 MTR_7g099170 25.764 229 139 6 50 250 231 456 3.47e-12 67.4
MS.gene067859.t1 MTR_5g085250 26.562 192 130 6 112 301 437 619 3.51e-12 67.8
MS.gene067859.t1 MTR_7g099170 25.764 229 139 6 50 250 203 428 3.88e-12 67.4
MS.gene067859.t1 MTR_5g085250 26.562 192 130 6 112 301 333 515 4.32e-12 67.4
MS.gene067859.t1 MTR_5g085250 27.979 193 126 7 112 301 300 482 4.90e-12 67.4
MS.gene067859.t1 MTR_2g087640 27.429 175 109 3 88 245 136 309 5.70e-12 66.2
MS.gene067859.t1 MTR_2g087640 25.431 232 150 6 92 309 4 226 5.12e-11 63.5
MS.gene067859.t1 MTR_7g451830 23.832 214 151 4 50 253 203 414 1.45e-11 65.5
MS.gene067859.t1 MTR_7g047640 23.832 214 151 4 50 253 203 414 1.45e-11 65.5
MS.gene067859.t1 MTR_1g011610 23.762 303 195 11 47 326 545 834 1.46e-11 66.2
MS.gene067859.t1 MTR_4g007500 24.138 174 119 2 83 245 185 356 1.80e-11 65.1
MS.gene067859.t1 MTR_7g057540 22.936 218 149 6 50 253 192 404 1.83e-11 65.1
MS.gene067859.t1 MTR_2g102277 28.313 166 114 4 48 209 92 256 1.93e-11 65.9
MS.gene067859.t1 MTR_7g055590 22.222 243 158 7 50 266 192 429 1.94e-11 65.5
MS.gene067859.t1 MTR_2g102277 28.313 166 114 4 48 209 92 256 2.01e-11 65.9
MS.gene067859.t1 MTR_4g011950 28.313 166 114 4 48 209 92 256 2.34e-11 65.5
MS.gene067859.t1 MTR_8g093540 29.496 139 92 2 35 168 44 181 2.48e-11 65.1
MS.gene067859.t1 MTR_3g078380 25.382 327 180 13 48 319 55 372 4.94e-11 63.9
MS.gene067859.t1 MTR_8g100005 24.091 220 147 6 94 304 368 576 6.10e-11 63.9
MS.gene067859.t1 MTR_6g005920 23.868 243 138 7 97 301 48 281 8.09e-11 63.2
MS.gene067859.t1 MTR_2g060710 22.897 214 153 5 51 253 214 426 8.35e-11 63.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene067859.t1 AT2G43770 83.188 345 56 1 1 345 1 343 0.0 624
MS.gene067859.t1 AT3G49660 30.201 298 196 6 51 342 20 311 1.89e-41 147
MS.gene067859.t1 AT3G49660 26.364 220 143 6 46 254 104 315 2.48e-21 93.2
MS.gene067859.t1 AT4G02730 29.592 294 181 11 51 333 39 317 8.99e-32 122
MS.gene067859.t1 AT4G02730 27.488 211 144 5 48 251 121 329 1.11e-19 89.0
MS.gene067859.t1 AT5G52820 30.820 305 175 13 51 342 105 386 1.42e-28 115
MS.gene067859.t1 AT5G52820 25.138 362 167 10 35 301 119 471 2.67e-21 95.1
MS.gene067859.t1 AT5G64730 27.667 300 194 8 50 342 13 296 1.54e-27 110
MS.gene067859.t1 AT5G64730 25.472 212 141 5 48 251 95 297 1.76e-12 67.4
MS.gene067859.t1 AT5G08390 26.852 216 149 4 126 340 2 209 7.63e-27 112
MS.gene067859.t1 AT5G08390 24.903 257 176 7 51 302 12 256 2.66e-20 92.8
MS.gene067859.t1 AT5G08390 25.667 300 181 9 48 314 52 342 2.62e-14 74.7
MS.gene067859.t1 AT5G23430 26.267 217 151 4 127 342 3 211 1.30e-25 108
MS.gene067859.t1 AT5G23430 24.335 263 170 8 51 302 12 256 1.23e-20 93.6
MS.gene067859.t1 AT5G23430 27.488 211 145 5 48 255 52 257 8.66e-14 72.8
MS.gene067859.t1 AT5G23430 26.267 217 151 4 127 342 3 211 1.30e-25 108
MS.gene067859.t1 AT5G23430 24.335 263 170 8 51 302 12 256 1.23e-20 93.6
MS.gene067859.t1 AT5G23430 27.488 211 145 5 48 255 52 257 8.66e-14 72.8
MS.gene067859.t1 AT5G23430 26.267 217 151 4 127 342 3 211 1.30e-25 108
MS.gene067859.t1 AT5G23430 24.335 263 170 8 51 302 12 256 1.27e-20 93.6
MS.gene067859.t1 AT5G23430 27.488 211 145 5 48 255 52 257 8.75e-14 72.8
MS.gene067859.t1 AT1G10580 25.170 294 212 7 52 340 279 569 2.01e-24 104
MS.gene067859.t1 AT5G25150 27.935 247 162 5 34 279 404 635 5.67e-24 103
MS.gene067859.t1 AT5G25150 28.992 238 151 5 89 321 409 633 1.05e-21 96.7
MS.gene067859.t1 AT5G25150 24.490 196 137 4 153 345 428 615 3.12e-13 71.2
MS.gene067859.t1 AT5G25150 27.935 247 162 5 34 279 404 635 5.70e-24 103
MS.gene067859.t1 AT5G25150 29.114 237 150 5 89 320 409 632 1.17e-21 96.7
MS.gene067859.t1 AT5G25150 24.490 196 137 4 153 345 428 615 3.23e-13 71.2
MS.gene067859.t1 AT2G41500 27.799 259 174 6 48 304 291 538 1.52e-23 102
MS.gene067859.t1 AT2G41500 25.088 283 198 7 63 342 263 534 2.03e-18 86.7
MS.gene067859.t1 AT2G41500 27.638 199 132 6 143 339 258 446 1.25e-12 69.3
MS.gene067859.t1 AT2G41500 27.799 259 174 6 48 304 291 538 1.52e-23 102
MS.gene067859.t1 AT2G41500 25.088 283 198 7 63 342 263 534 2.03e-18 86.7
MS.gene067859.t1 AT2G41500 27.638 199 132 6 143 339 258 446 1.25e-12 69.3
MS.gene067859.t1 AT5G50230 24.904 261 191 2 53 313 223 478 1.84e-22 98.6
MS.gene067859.t1 AT5G50230 29.524 210 133 6 51 251 305 508 7.42e-16 79.0
MS.gene067859.t1 AT1G61210 24.057 212 152 3 130 340 5 208 3.79e-22 98.2
MS.gene067859.t1 AT1G61210 26.971 241 160 6 66 302 27 255 7.46e-22 97.4
MS.gene067859.t1 AT1G61210 25.346 217 150 5 113 327 31 237 3.90e-17 83.2
MS.gene067859.t1 AT1G61210 27.230 213 143 6 48 255 51 256 8.36e-13 70.1
MS.gene067859.t1 AT5G08560 24.667 300 209 10 50 342 269 558 4.37e-22 97.8
MS.gene067859.t1 AT5G08560 24.667 300 209 10 50 342 269 558 4.37e-22 97.8
MS.gene067859.t1 AT5G08560 24.667 300 209 10 50 342 269 558 4.37e-22 97.8
MS.gene067859.t1 AT1G61210 24.057 212 152 3 130 340 5 208 6.67e-22 97.4
MS.gene067859.t1 AT1G61210 26.971 241 160 6 66 302 27 255 1.36e-21 96.7
MS.gene067859.t1 AT1G61210 25.346 217 150 5 113 327 31 237 6.74e-17 82.4
MS.gene067859.t1 AT1G61210 27.230 213 143 6 48 255 51 256 1.43e-12 69.3
MS.gene067859.t1 AT1G61210 24.057 212 152 3 130 340 5 208 7.73e-22 97.4
MS.gene067859.t1 AT1G61210 26.971 241 160 6 66 302 27 255 1.47e-21 96.7
MS.gene067859.t1 AT1G61210 25.346 217 150 5 113 327 31 237 7.19e-17 82.4
MS.gene067859.t1 AT1G61210 27.230 213 143 6 48 255 51 256 1.44e-12 69.3
MS.gene067859.t1 AT1G11160 24.528 212 151 3 130 340 5 208 1.40e-21 96.7
MS.gene067859.t1 AT1G11160 26.556 241 161 6 66 302 27 255 1.98e-21 96.3
MS.gene067859.t1 AT1G11160 24.658 219 149 5 113 327 31 237 4.23e-16 80.1
MS.gene067859.t1 AT1G11160 27.885 208 146 4 49 255 52 256 3.16e-13 71.2
MS.gene067859.t1 AT1G11160 26.506 166 112 6 48 209 93 252 1.34e-11 66.2
MS.gene067859.t1 AT1G11160 24.528 212 151 3 130 340 5 208 1.46e-21 96.7
MS.gene067859.t1 AT1G11160 26.556 241 161 6 66 302 27 255 2.02e-21 96.3
MS.gene067859.t1 AT1G11160 24.658 219 149 5 113 327 31 237 3.93e-16 80.1
MS.gene067859.t1 AT1G11160 27.885 208 146 4 49 255 52 256 3.22e-13 71.2
MS.gene067859.t1 AT1G11160 26.506 166 112 6 48 209 93 252 1.50e-11 66.2
MS.gene067859.t1 AT1G11160 24.528 212 151 3 130 340 5 208 1.55e-21 96.3
MS.gene067859.t1 AT1G11160 26.556 241 161 6 66 302 27 255 2.04e-21 95.9
MS.gene067859.t1 AT1G11160 24.658 219 149 5 113 327 31 237 4.20e-16 80.1
MS.gene067859.t1 AT1G11160 27.885 208 146 4 49 255 52 256 2.93e-13 71.2
MS.gene067859.t1 AT1G11160 26.506 166 112 6 48 209 93 252 1.46e-11 66.2
MS.gene067859.t1 AT3G16650 26.102 295 188 10 50 341 165 432 2.80e-21 94.7
MS.gene067859.t1 AT3G16650 25.146 171 125 3 85 254 157 325 1.99e-13 71.6
MS.gene067859.t1 AT5G54520 25.538 325 221 11 35 344 139 457 3.19e-20 91.7
MS.gene067859.t1 AT5G67320 26.911 327 200 10 46 345 256 570 3.83e-20 92.0
MS.gene067859.t1 AT5G67320 23.625 309 209 10 9 302 314 610 1.50e-19 90.1
MS.gene067859.t1 AT5G67320 29.714 175 112 3 47 212 440 612 4.64e-14 73.6
MS.gene067859.t1 AT3G18130 28.772 285 173 9 69 341 30 296 9.23e-20 89.0
MS.gene067859.t1 AT3G18130 30.515 272 159 13 51 301 59 321 8.34e-19 86.3
MS.gene067859.t1 AT3G18130 28.070 228 140 6 51 256 101 326 1.59e-16 79.7
MS.gene067859.t1 AT1G48630 31.443 194 123 4 69 253 30 222 3.87e-19 87.4
MS.gene067859.t1 AT1G48630 27.407 270 170 11 51 301 59 321 4.12e-17 81.3
MS.gene067859.t1 AT1G48630 26.754 228 143 6 51 256 101 326 2.85e-15 76.3
MS.gene067859.t1 AT1G48630 25.692 253 161 11 92 328 5 246 4.60e-14 72.4
MS.gene067859.t1 AT4G15900 25.510 294 192 9 50 341 171 439 4.12e-19 88.6
MS.gene067859.t1 AT4G15900 25.731 171 125 2 85 254 163 332 6.52e-16 79.0
MS.gene067859.t1 AT4G15900 27.143 210 139 5 131 337 167 365 8.51e-15 75.5
MS.gene067859.t1 AT1G18080 29.183 257 155 9 69 312 30 272 4.67e-19 87.0
MS.gene067859.t1 AT1G18080 27.778 270 170 11 51 301 59 322 5.45e-17 81.3
MS.gene067859.t1 AT1G18080 27.074 229 142 6 51 256 101 327 3.16e-15 75.9
MS.gene067859.t1 AT1G18080 27.165 254 157 11 92 328 5 247 9.63e-15 74.7
MS.gene067859.t1 AT5G13480 24.232 293 203 9 51 337 130 409 7.06e-19 88.2
MS.gene067859.t1 AT5G13480 24.232 293 203 9 51 337 107 386 7.87e-19 88.2
MS.gene067859.t1 AT5G13480 24.232 293 203 9 51 337 107 386 8.50e-19 87.8
MS.gene067859.t1 AT5G13480 24.232 293 203 9 51 337 119 398 9.06e-19 87.8
MS.gene067859.t1 AT5G43920 24.679 312 195 9 48 339 217 508 2.73e-18 86.3
MS.gene067859.t1 AT1G15440 23.077 273 157 7 45 315 339 560 3.71e-18 86.3
MS.gene067859.t1 AT1G15440 24.623 199 141 3 149 345 315 506 1.86e-12 68.9
MS.gene067859.t1 AT1G15440 23.077 273 157 7 45 315 379 600 3.88e-18 86.3
MS.gene067859.t1 AT1G15440 24.623 199 141 3 149 345 355 546 2.14e-12 68.6
MS.gene067859.t1 AT1G11160 25.641 156 108 2 185 340 19 166 1.20e-17 84.7
MS.gene067859.t1 AT1G11160 26.554 177 115 4 155 327 30 195 4.45e-16 80.1
MS.gene067859.t1 AT1G11160 27.670 206 145 4 51 255 12 214 7.11e-13 70.1
MS.gene067859.t1 AT1G11160 26.506 166 112 6 48 209 51 210 1.35e-11 66.2
MS.gene067859.t1 AT3G15354 27.547 265 170 8 51 301 280 536 2.30e-17 83.6
MS.gene067859.t1 AT3G15354 27.547 265 170 8 51 301 280 536 2.30e-17 83.6
MS.gene067859.t1 AT4G03020 23.821 403 234 11 8 340 68 467 2.51e-17 83.2
MS.gene067859.t1 AT4G03020 23.821 403 234 11 8 340 68 467 2.51e-17 83.2
MS.gene067859.t1 AT4G03020 23.821 403 234 11 8 340 68 467 2.51e-17 83.2
MS.gene067859.t1 AT3G15354 27.547 265 170 8 51 301 530 786 2.61e-17 83.6
MS.gene067859.t1 AT1G71840 22.571 350 210 10 45 344 60 398 4.10e-17 82.0
MS.gene067859.t1 AT1G71840 23.874 222 161 4 45 261 187 405 2.52e-16 79.7
MS.gene067859.t1 AT3G27640 25.085 295 167 8 96 345 126 411 1.16e-16 81.3
MS.gene067859.t1 AT3G27640 25.085 295 167 8 96 345 107 392 1.19e-16 81.3
MS.gene067859.t1 AT1G62020 25.571 219 123 6 154 342 22 230 4.12e-16 80.1
MS.gene067859.t1 AT1G62020 22.917 288 184 11 61 340 15 272 2.08e-13 72.0
MS.gene067859.t1 AT1G62020 23.529 255 169 8 54 306 50 280 2.32e-12 68.6
MS.gene067859.t1 AT5G13840 24.434 221 161 3 48 264 250 468 5.12e-16 79.3
MS.gene067859.t1 AT5G13840 24.434 221 161 3 48 264 250 468 5.12e-16 79.3
MS.gene067859.t1 AT4G29830 24.444 315 204 7 53 342 12 317 7.99e-16 77.8
MS.gene067859.t1 AT4G29830 25.123 203 138 3 48 236 95 297 7.56e-12 65.9
MS.gene067859.t1 AT5G16750 23.776 286 190 7 51 319 354 628 1.03e-15 79.0
MS.gene067859.t1 AT5G16750 24.632 272 179 11 50 305 396 657 7.51e-15 76.3
MS.gene067859.t1 AT5G16750 23.693 287 191 9 76 342 331 609 2.73e-11 65.5
MS.gene067859.t1 AT5G16750 22.552 337 208 13 53 342 100 430 5.75e-11 64.3
MS.gene067859.t1 AT5G56130 21.993 291 212 7 53 339 18 297 1.69e-15 76.6
MS.gene067859.t1 AT5G56130 23.529 255 182 5 95 345 17 262 6.15e-12 66.2
MS.gene067859.t1 AT4G34460 29.680 219 136 8 50 251 151 368 2.58e-15 76.6
MS.gene067859.t1 AT4G34460 28.030 264 165 9 58 301 110 368 4.47e-15 75.9
MS.gene067859.t1 AT4G34460 29.680 219 136 8 50 251 146 363 2.65e-15 76.6
MS.gene067859.t1 AT4G34460 28.030 264 165 9 58 301 105 363 3.96e-15 76.3
MS.gene067859.t1 AT4G34460 28.030 264 165 9 58 301 48 306 3.77e-15 75.5
MS.gene067859.t1 AT3G21540 36.220 127 75 3 51 175 102 224 4.28e-15 77.0
MS.gene067859.t1 AT3G18140 23.214 280 192 9 69 337 7 274 6.05e-15 74.7
MS.gene067859.t1 AT3G18140 24.286 280 191 8 56 325 36 304 6.91e-15 74.7
MS.gene067859.t1 AT3G18140 23.605 233 162 6 47 270 70 295 1.99e-12 67.4
MS.gene067859.t1 AT3G18140 24.082 245 162 9 113 345 8 240 3.83e-12 66.6
MS.gene067859.t1 AT2G47410 25.822 213 130 4 48 233 47 258 1.59e-14 75.5
MS.gene067859.t1 AT2G47410 25.822 213 130 4 48 233 229 440 1.65e-14 75.5
MS.gene067859.t1 AT2G47410 25.822 213 130 4 48 233 228 439 1.72e-14 75.5
MS.gene067859.t1 AT4G32551 22.420 281 207 7 63 342 697 967 2.53e-14 74.7
MS.gene067859.t1 AT4G32551 22.420 281 207 7 63 342 659 929 2.64e-14 74.7
MS.gene067859.t1 AT1G53090 31.724 145 96 3 111 253 326 469 8.25e-14 72.8
MS.gene067859.t1 AT1G53090 31.724 145 96 3 111 253 547 690 9.39e-14 72.8
MS.gene067859.t1 AT1G53090 31.724 145 96 3 111 253 547 690 9.39e-14 72.8
MS.gene067859.t1 AT1G53090 31.724 145 96 3 111 253 547 690 9.39e-14 72.8
MS.gene067859.t1 AT4G22910 23.923 209 153 3 51 255 255 461 2.03e-13 71.2
MS.gene067859.t1 AT4G11110 24.907 269 172 8 58 301 714 977 2.08e-13 72.0
MS.gene067859.t1 AT2G21390 23.024 291 186 11 58 340 12 272 2.57e-13 71.6
MS.gene067859.t1 AT2G21390 23.715 253 171 7 54 306 50 280 3.31e-13 71.2
MS.gene067859.t1 AT2G47410 24.664 223 130 4 48 233 47 268 2.60e-13 71.6
MS.gene067859.t1 AT2G47410 24.664 223 130 4 48 233 47 268 2.60e-13 71.6
MS.gene067859.t1 AT2G47410 24.664 223 130 4 48 233 229 450 2.91e-13 71.6
MS.gene067859.t1 AT1G79990 30.120 166 111 4 48 209 92 256 3.99e-13 70.9
MS.gene067859.t1 AT1G79990 30.120 166 111 4 48 209 92 256 4.20e-13 70.9
MS.gene067859.t1 AT1G73720 32.283 127 82 3 54 179 262 385 4.68e-13 70.5
MS.gene067859.t1 AT1G73720 26.786 168 113 4 96 254 211 377 1.54e-12 68.9
MS.gene067859.t1 AT1G73720 25.980 204 127 7 155 342 227 422 4.19e-11 64.3
MS.gene067859.t1 AT2G22040 24.126 286 192 10 70 342 13 286 5.32e-13 69.3
MS.gene067859.t1 AT2G22040 24.312 218 152 6 47 254 76 290 4.65e-11 63.5
MS.gene067859.t1 AT4G34380 24.255 235 154 7 97 311 234 464 7.39e-13 69.7
MS.gene067859.t1 AT3G05090 24.382 283 200 7 68 345 53 326 8.29e-13 70.1
MS.gene067859.t1 AT3G05090 24.382 283 200 7 68 345 53 326 8.29e-13 70.1
MS.gene067859.t1 AT3G05090 24.382 283 200 7 68 345 53 326 8.29e-13 70.1
MS.gene067859.t1 AT2G32950 26.368 201 136 7 104 301 313 504 8.86e-13 69.7
MS.gene067859.t1 AT2G32700 22.182 275 159 8 56 329 511 731 1.10e-12 69.7
MS.gene067859.t1 AT2G32700 22.182 275 159 8 56 329 511 731 1.10e-12 69.7
MS.gene067859.t1 AT2G32700 22.182 275 159 8 56 329 511 731 1.10e-12 69.7
MS.gene067859.t1 AT2G32700 22.182 275 159 8 56 329 511 731 1.10e-12 69.7
MS.gene067859.t1 AT2G32700 22.182 275 159 8 56 329 511 731 1.10e-12 69.7
MS.gene067859.t1 AT2G32700 22.182 275 159 8 56 329 530 750 1.13e-12 69.7
MS.gene067859.t1 AT2G32700 22.182 275 159 8 56 329 509 729 1.15e-12 69.3
MS.gene067859.t1 AT2G32950 26.368 201 136 7 104 301 426 617 1.23e-12 69.3
MS.gene067859.t1 AT2G34260 21.107 289 215 6 58 342 9 288 1.37e-12 68.6
MS.gene067859.t1 AT1G15470 23.667 300 167 9 92 342 5 291 1.55e-12 68.2
MS.gene067859.t1 AT2G33340 24.615 260 175 9 51 301 260 507 3.70e-12 67.8
MS.gene067859.t1 AT2G33340 25.397 189 127 6 155 337 236 416 4.35e-11 64.3
MS.gene067859.t1 AT2G33340 24.615 260 175 9 51 301 260 507 3.70e-12 67.8
MS.gene067859.t1 AT2G33340 25.397 189 127 6 155 337 236 416 4.35e-11 64.3
MS.gene067859.t1 AT3G15354 26.038 265 166 9 51 301 530 778 4.11e-12 67.8
MS.gene067859.t1 AT3G15980 28.313 166 114 4 48 209 92 256 9.34e-12 66.6
MS.gene067859.t1 AT3G15980 25.481 208 148 5 58 260 60 265 4.03e-11 64.7
MS.gene067859.t1 AT2G46290 29.299 157 93 3 106 245 183 338 9.46e-12 65.9
MS.gene067859.t1 AT3G15980 28.313 166 114 4 48 209 92 256 9.73e-12 66.6
MS.gene067859.t1 AT3G15980 25.481 208 148 5 58 260 60 265 3.91e-11 64.7
MS.gene067859.t1 AT3G15980 28.313 166 114 4 48 209 92 256 9.95e-12 66.6
MS.gene067859.t1 AT3G15980 25.481 208 148 5 58 260 60 265 4.38e-11 64.7
MS.gene067859.t1 AT3G15980 28.313 166 114 4 48 209 92 256 9.95e-12 66.6
MS.gene067859.t1 AT3G15980 25.481 208 148 5 58 260 60 265 4.38e-11 64.7
MS.gene067859.t1 AT3G15980 28.313 166 114 4 48 209 92 256 9.95e-12 66.6
MS.gene067859.t1 AT3G15980 25.481 208 148 5 58 260 60 265 4.38e-11 64.7
MS.gene067859.t1 AT3G15980 28.313 166 114 4 48 209 92 256 9.95e-12 66.6
MS.gene067859.t1 AT3G15980 25.481 208 148 5 58 260 60 265 4.38e-11 64.7
MS.gene067859.t1 AT3G15980 28.313 166 114 4 48 209 92 256 1.02e-11 66.6
MS.gene067859.t1 AT3G15980 25.481 208 148 5 58 260 60 265 4.10e-11 64.7
MS.gene067859.t1 AT5G64630 26.471 204 117 5 51 240 60 244 1.08e-11 65.9
MS.gene067859.t1 AT5G64630 26.857 175 116 4 174 338 4 176 8.90e-11 63.2
MS.gene067859.t1 AT1G52360 28.313 166 114 4 48 209 136 300 1.10e-11 66.6
MS.gene067859.t1 AT4G34460 21.622 296 206 11 28 303 35 324 1.13e-11 65.5
MS.gene067859.t1 AT1G52360 28.313 166 114 4 48 209 92 256 1.17e-11 66.6
MS.gene067859.t1 AT1G52360 28.313 166 114 4 48 209 92 256 1.17e-11 66.6
MS.gene067859.t1 AT1G15470 27.600 250 159 8 92 332 5 241 1.24e-11 64.7
MS.gene067859.t1 AT4G11920 22.703 185 139 2 75 255 269 453 1.32e-11 65.9
MS.gene067859.t1 AT1G52360 28.313 166 114 4 48 209 92 256 1.39e-11 66.2
MS.gene067859.t1 AT5G64630 26.471 204 117 5 51 240 60 244 1.60e-11 65.5
MS.gene067859.t1 AT5G49430 32.540 126 82 2 48 171 238 362 1.69e-11 66.2
MS.gene067859.t1 AT5G49430 32.540 126 82 2 48 171 238 362 1.69e-11 66.2
MS.gene067859.t1 AT1G29260 27.083 144 101 4 113 252 122 265 1.96e-11 64.7
MS.gene067859.t1 AT1G29260 26.244 221 141 11 136 342 51 263 6.28e-11 63.2
MS.gene067859.t1 AT3G42660 24.291 247 141 6 58 303 107 308 1.97e-11 65.9
MS.gene067859.t1 AT3G21060 22.093 344 202 11 58 342 26 362 2.42e-11 65.1
MS.gene067859.t1 AT2G26490 27.072 181 118 6 97 269 205 379 2.58e-11 65.1
MS.gene067859.t1 AT2G33340 25.397 189 127 6 155 337 236 416 3.62e-11 64.7
MS.gene067859.t1 AT2G33340 25.604 207 137 7 51 248 260 458 4.34e-11 64.3
MS.gene067859.t1 AT3G15610 25.743 303 200 13 49 342 10 296 4.53e-11 63.5
MS.gene067859.t1 AT3G44530 24.710 259 128 9 58 315 16 208 5.64e-11 64.3
MS.gene067859.t1 AT2G05720 26.984 189 100 6 147 328 69 226 6.08e-11 62.8
MS.gene067859.t1 AT1G04510 24.468 188 131 6 155 337 236 417 6.45e-11 63.9
MS.gene067859.t1 AT1G04510 24.468 188 131 6 155 337 236 417 6.51e-11 63.9
MS.gene067859.t1 AT3G44530 24.710 259 128 9 58 315 16 208 6.81e-11 64.3
MS.gene067859.t1 AT1G49450 27.895 190 123 7 89 270 237 420 9.13e-11 63.2

Find 91 sgRNAs with CRISPR-Local

Find 107 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AAATCGATGTGTGAAGATTT+TGG 0.210538 7.1:-19032862 MS.gene067859:CDS
ATGATGGAACAGCAAAATTA+TGG 0.214770 7.1:-19033157 MS.gene067859:CDS
TGGGGATTGCAAGAACTTTA+TGG 0.220748 7.1:-19033384 MS.gene067859:CDS
TACAATGCTCCTCGTGCTCC+TGG 0.260112 7.1:-19033560 MS.gene067859:CDS
CTGATAAAACACTCAGGTTA+TGG 0.275729 7.1:-19033286 MS.gene067859:CDS
AAGAACTTTATGGTTCTAAA+AGG 0.322543 7.1:-19033374 MS.gene067859:CDS
TTGATAATGATGTCAAGATA+TGG 0.329411 7.1:-19033034 MS.gene067859:CDS
GGTATTTATCAGGAAATGTT+TGG 0.338593 7.1:+19033111 None:intergenic
TGGATTGCAAGCTTTGCATT+TGG 0.355336 7.1:-19032908 MS.gene067859:CDS
CATCCCAATGAACCTATTGT+TGG 0.366502 7.1:-19032666 MS.gene067859:CDS
CTGATCGAATGGTTTACATC+TGG 0.370909 7.1:-19032758 MS.gene067859:CDS
TCCTGTTGGATTGAACTTCA+TGG 0.372012 7.1:+19033460 None:intergenic
TCAACAGTTGCTGTCCTTCC+CGG 0.373390 7.1:-19033211 MS.gene067859:CDS
GCAGTAATCTGGTATTTATC+AGG 0.374593 7.1:+19033101 None:intergenic
AAAGCAGCGGACTTCAAGTT+TGG 0.376990 7.1:-19033528 MS.gene067859:CDS
GGATTGCAAGCTTTGCATTT+GGG 0.377088 7.1:-19032907 MS.gene067859:CDS
GAAGTCCGCTGCTTTCCATT+TGG 0.380605 7.1:+19033536 None:intergenic
TGATCCAACAATAGGTTCAT+TGG 0.384589 7.1:+19032662 None:intergenic
AGTGACAAGCAGATTTATCT+TGG 0.392857 7.1:-19032633 MS.gene067859:CDS
TGATAAAACACTCAGGTTAT+GGG 0.402287 7.1:-19033285 MS.gene067859:CDS
ACAGGATCAGTCGTTGCATC+TGG 0.404975 7.1:-19033443 MS.gene067859:CDS
CGCTGCTTTCCATTTGGCCC+AGG 0.414495 7.1:+19033542 None:intergenic
CCTCGTGCTCCTGGGCCAAA+TGG 0.434379 7.1:-19033551 MS.gene067859:CDS
CTGCTACATGATCCAACAAT+AGG 0.437498 7.1:+19032654 None:intergenic
AGAAGCTGACAGCAGTAATC+TGG 0.437617 7.1:+19033090 None:intergenic
GTGACAAGCAGATTTATCTT+GGG 0.440302 7.1:-19032632 MS.gene067859:CDS
ACCATGAAGTTCAATCCAAC+AGG 0.451176 7.1:-19033461 MS.gene067859:CDS
GATCCAACAATAGGTTCATT+GGG 0.458166 7.1:+19032663 None:intergenic
GTTGTCAGTGGCTCTGATGA+TGG 0.458547 7.1:-19033173 MS.gene067859:CDS
TGATGGAACAGCAAAATTAT+GGG 0.459959 7.1:-19033156 MS.gene067859:CDS
GCTGTAACCTTGCTTCCATC+AGG 0.459979 7.1:+19032789 None:intergenic
TGATCGAATGGTTTACATCT+GGG 0.474757 7.1:-19032757 MS.gene067859:CDS
GTTGCTGTCCTTCCCGGAGG+GGG 0.480310 7.1:-19033205 MS.gene067859:CDS
GAACATGCTCTGTCAGTTGT+TGG 0.481272 7.1:-19033614 MS.gene067859:CDS
TGATAATGATGTCAAGATAT+GGG 0.481545 7.1:-19033033 MS.gene067859:CDS
TGACCAGTCAGCAACATGAT+TGG 0.490379 7.1:+19033500 None:intergenic
AGGTTATGGGATACAGAAAC+AGG 0.491394 7.1:-19033272 MS.gene067859:CDS
GATGGAAGCAAGGTTACAGC+TGG 0.492182 7.1:-19032786 MS.gene067859:CDS
GATCTTCACTGGACTTCAGA+TGG 0.494128 7.1:-19033332 MS.gene067859:CDS
ATTATGGGATATGCGTCAAA+GGG 0.495104 7.1:-19033141 MS.gene067859:CDS
ATACAATATTCTTCGAGAAG+TGG 0.496146 7.1:+19032731 None:intergenic
AATCCATGCCATTGGTAAGA+AGG 0.504532 7.1:+19032925 None:intergenic
CAGTTGCTGTCCTTCCCGGA+GGG 0.504648 7.1:-19033207 MS.gene067859:CDS
AGCTGGGAGTTCTGATCGAA+TGG 0.504723 7.1:-19032769 MS.gene067859:CDS
CTACCTTCTTACCAATGGCA+TGG 0.505237 7.1:-19032928 MS.gene067859:CDS
GAGGTTACCATGACACTTCA+AGG 0.508988 7.1:-19032996 MS.gene067859:CDS
TCTCCAATCATGTTGCTGAC+TGG 0.509357 7.1:-19033503 MS.gene067859:CDS
CAACAATAGGTTCATTGGGA+TGG 0.512229 7.1:+19032667 None:intergenic
GGAGCACGAGGAGCATTGTA+TGG 0.514520 7.1:+19033563 None:intergenic
AATTATGGGATATGCGTCAA+AGG 0.514841 7.1:-19033142 MS.gene067859:CDS
AAGATATGGGATTTGCGTAA+AGG 0.526390 7.1:-19033020 MS.gene067859:CDS
GGGCCACCTCTTGTTGTCAG+TGG 0.528777 7.1:-19033185 MS.gene067859:CDS
AGTTGTTGGTTCAAAGCCAA+TGG 0.529017 7.1:-19033600 MS.gene067859:CDS
AGAATATTGTATAAGCTACC+TGG 0.531788 7.1:-19032720 MS.gene067859:CDS
GTAAGAAGGTAGGAACCATC+AGG 0.540428 7.1:+19032939 None:intergenic
TTTATCAGGAAATGTTTGGA+TGG 0.545878 7.1:+19033115 None:intergenic
TAAGCAAAGGTCATCATGCA+AGG 0.548399 7.1:-19033653 None:intergenic
AGAATTTGTTGAAATGTGGC+TGG 0.551762 7.1:-19032815 MS.gene067859:CDS
ACAATGCTCCTCGTGCTCCT+GGG 0.555966 7.1:-19033559 MS.gene067859:CDS
GGCACAGTAGACCATTCCAT+TGG 0.559084 7.1:+19033584 None:intergenic
GGTTCCTACCTTCTTACCAA+TGG 0.559110 7.1:-19032933 MS.gene067859:CDS
AAGCTTGCAATCCATGCCAT+TGG 0.571955 7.1:+19032917 None:intergenic
CCATTTGGCCCAGGAGCACG+AGG 0.572146 7.1:+19033551 None:intergenic
TTTCCTTTGGAATGTGCATG+GGG 0.575575 7.1:-19033402 MS.gene067859:CDS
ATCTTCACTGGACTTCAGAT+GGG 0.576718 7.1:-19033331 MS.gene067859:CDS
AGTTGCTGTCCTTCCCGGAG+GGG 0.581679 7.1:-19033206 MS.gene067859:CDS
CATGCCATTGGTAAGAAGGT+AGG 0.585569 7.1:+19032929 None:intergenic
GAGAAGAATTTGTTGAAATG+TGG 0.585649 7.1:-19032819 MS.gene067859:CDS
TGACAAGCAGATTTATCTTG+GGG 0.590927 7.1:-19032631 MS.gene067859:CDS
TTGGTTCAAAGCCAATGGAA+TGG 0.596893 7.1:-19033595 MS.gene067859:CDS
AGTATGCAATTGAGTCCTGA+TGG 0.597470 7.1:-19032954 MS.gene067859:CDS
ATGGGATTTGCGTAAAGGTG+AGG 0.598813 7.1:-19033015 MS.gene067859:CDS
GATGCAACGACTGATCCTGT+TGG 0.603708 7.1:+19033446 None:intergenic
AAATGTGGCTGGTCACCTGA+TGG 0.605504 7.1:-19032804 MS.gene067859:CDS
CTGGTCACCTGATGGAAGCA+AGG 0.609923 7.1:-19032796 MS.gene067859:CDS
TTAACAGATCCATTGTGCCC+AGG 0.610020 7.1:+19032702 None:intergenic
TCATGGTATATACAGCACTC+TGG 0.613882 7.1:+19033477 None:intergenic
TCAGAGCCACTGACAACAAG+AGG 0.616051 7.1:+19033179 None:intergenic
CTGGGCCAAATGGAAAGCAG+CGG 0.617825 7.1:-19033541 MS.gene067859:CDS
GAATATTGTATAAGCTACCT+GGG 0.618052 7.1:-19032719 MS.gene067859:CDS
AATCCCCATGCACATTCCAA+AGG 0.619475 7.1:+19033399 None:intergenic
ACAGTTGCTGTCCTTCCCGG+AGG 0.624368 7.1:-19033208 MS.gene067859:CDS
TATAAGCTACCTGGGCACAA+TGG 0.631539 7.1:-19032711 MS.gene067859:CDS
GCCTCAGACAAGATCTACAC+TGG 0.639430 7.1:-19033062 MS.gene067859:CDS
ATGGAAGCAAGGTTACAGCT+GGG 0.648545 7.1:-19032785 MS.gene067859:CDS
TTGATGACCTTGAAGTGTCA+TGG 0.649986 7.1:+19032989 None:intergenic
CCAGCCCTGATAAAACACTC+AGG 0.656707 7.1:-19033292 MS.gene067859:CDS
GAGCCACTGACAACAAGAGG+TGG 0.665793 7.1:+19033182 None:intergenic
ACCAGTGTAGATCTTGTCTG+AGG 0.678022 7.1:+19033061 None:intergenic
TCAGACAAGATCTACACTGG+TGG 0.694443 7.1:-19033059 MS.gene067859:CDS
TTATGGGATATGCGTCAAAG+GGG 0.713777 7.1:-19033140 MS.gene067859:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
! AGGAAAACAAATCAAAAAGA+TGG - chr7.1:19033009-19033028 MS.gene067859:CDS 25.0%
!! TGATAATGATGTCAAGATAT+GGG - chr7.1:19033228-19033247 MS.gene067859:CDS 25.0%
!!! AAGAACTTTATGGTTCTAAA+AGG - chr7.1:19032887-19032906 MS.gene067859:CDS 25.0%
!!! TTGATAATGATGTCAAGATA+TGG - chr7.1:19033227-19033246 MS.gene067859:CDS 25.0%
AGAATATTGTATAAGCTACC+TGG - chr7.1:19033541-19033560 MS.gene067859:CDS 30.0%
ATACAATATTCTTCGAGAAG+TGG + chr7.1:19033533-19033552 None:intergenic 30.0%
GAATATTGTATAAGCTACCT+GGG - chr7.1:19033542-19033561 MS.gene067859:CDS 30.0%
GGTATTTATCAGGAAATGTT+TGG + chr7.1:19033153-19033172 None:intergenic 30.0%
TGATAAAACACTCAGGTTAT+GGG - chr7.1:19032976-19032995 MS.gene067859:CDS 30.0%
TGATGGAACAGCAAAATTAT+GGG - chr7.1:19033105-19033124 MS.gene067859:CDS 30.0%
TTTATCAGGAAATGTTTGGA+TGG + chr7.1:19033149-19033168 None:intergenic 30.0%
! AAATCGATGTGTGAAGATTT+TGG - chr7.1:19033399-19033418 MS.gene067859:CDS 30.0%
! ATAACCTGAGTGTTTTATCA+GGG + chr7.1:19032976-19032995 None:intergenic 30.0%
! ATGACAGAGAAATTTTCCTT+TGG - chr7.1:19032846-19032865 MS.gene067859:CDS 30.0%
! ATGATGGAACAGCAAAATTA+TGG - chr7.1:19033104-19033123 MS.gene067859:CDS 30.0%
!! GAGAAGAATTTGTTGAAATG+TGG - chr7.1:19033442-19033461 MS.gene067859:CDS 30.0%
AAGATATGGGATTTGCGTAA+AGG - chr7.1:19033241-19033260 MS.gene067859:CDS 35.0%
AATTATGGGATATGCGTCAA+AGG - chr7.1:19033119-19033138 MS.gene067859:CDS 35.0%
AGTGACAAGCAGATTTATCT+TGG - chr7.1:19033628-19033647 MS.gene067859:CDS 35.0%
ATTATGGGATATGCGTCAAA+GGG - chr7.1:19033120-19033139 MS.gene067859:CDS 35.0%
CTGATAAAACACTCAGGTTA+TGG - chr7.1:19032975-19032994 MS.gene067859:CDS 35.0%
GATCCAACAATAGGTTCATT+GGG + chr7.1:19033601-19033620 None:intergenic 35.0%
GCAGTAATCTGGTATTTATC+AGG + chr7.1:19033163-19033182 None:intergenic 35.0%
GTGACAAGCAGATTTATCTT+GGG - chr7.1:19033629-19033648 MS.gene067859:CDS 35.0%
TGACAAGCAGATTTATCTTG+GGG - chr7.1:19033630-19033649 MS.gene067859:CDS 35.0%
TGATCCAACAATAGGTTCAT+TGG + chr7.1:19033602-19033621 None:intergenic 35.0%
TGATCGAATGGTTTACATCT+GGG - chr7.1:19033504-19033523 MS.gene067859:CDS 35.0%
! CATAACCTGAGTGTTTTATC+AGG + chr7.1:19032977-19032996 None:intergenic 35.0%
!! AGAATTTGTTGAAATGTGGC+TGG - chr7.1:19033446-19033465 MS.gene067859:CDS 35.0%
!! ATCGATTTTGTGGAGCATAT+GGG + chr7.1:19033387-19033406 None:intergenic 35.0%
!! GATGTGTGAAGATTTTGGAA+GGG - chr7.1:19033404-19033423 MS.gene067859:CDS 35.0%
!!! ATCTTCACACATCGATTTTG+TGG + chr7.1:19033397-19033416 None:intergenic 35.0%
!!! ATGCTGTTTTAGATCTTCAC+TGG - chr7.1:19032918-19032937 MS.gene067859:CDS 35.0%
!!! ATTTTCCTTTGGAATGTGCA+TGG - chr7.1:19032857-19032876 MS.gene067859:CDS 35.0%
!!! TTTTCCTTTGGAATGTGCAT+GGG - chr7.1:19032858-19032877 MS.gene067859:CDS 35.0%
AATCCATGCCATTGGTAAGA+AGG + chr7.1:19033339-19033358 None:intergenic 40.0%
ACCATGAAGTTCAATCCAAC+AGG - chr7.1:19032800-19032819 MS.gene067859:CDS 40.0%
AGGTTATGGGATACAGAAAC+AGG - chr7.1:19032989-19033008 MS.gene067859:CDS 40.0%
AGTATGCAATTGAGTCCTGA+TGG - chr7.1:19033307-19033326 MS.gene067859:CDS 40.0%
ATCTTCACTGGACTTCAGAT+GGG - chr7.1:19032930-19032949 MS.gene067859:CDS 40.0%
CAACAATAGGTTCATTGGGA+TGG + chr7.1:19033597-19033616 None:intergenic 40.0%
CATCCCAATGAACCTATTGT+TGG - chr7.1:19033595-19033614 MS.gene067859:CDS 40.0%
CTGATCGAATGGTTTACATC+TGG - chr7.1:19033503-19033522 MS.gene067859:CDS 40.0%
CTGCTACATGATCCAACAAT+AGG + chr7.1:19033610-19033629 None:intergenic 40.0%
GGATTGCAAGCTTTGCATTT+GGG - chr7.1:19033354-19033373 MS.gene067859:CDS 40.0%
TCATGGTATATACAGCACTC+TGG + chr7.1:19032787-19032806 None:intergenic 40.0%
TCCTGTTGGATTGAACTTCA+TGG + chr7.1:19032804-19032823 None:intergenic 40.0%
TGGATTGCAAGCTTTGCATT+TGG - chr7.1:19033353-19033372 MS.gene067859:CDS 40.0%
TGGGGATTGCAAGAACTTTA+TGG - chr7.1:19032877-19032896 MS.gene067859:CDS 40.0%
TTATGGGATATGCGTCAAAG+GGG - chr7.1:19033121-19033140 MS.gene067859:CDS 40.0%
TTGGTTCAAAGCCAATGGAA+TGG - chr7.1:19032666-19032685 MS.gene067859:CDS 40.0%
! AGAGCATGTTCATTTTCACC+AGG + chr7.1:19032638-19032657 None:intergenic 40.0%
! CGATGTGTGAAGATTTTGGA+AGG - chr7.1:19033403-19033422 MS.gene067859:CDS 40.0%
! TTGATGACCTTGAAGTGTCA+TGG + chr7.1:19033275-19033294 None:intergenic 40.0%
!! AGTTGTTGGTTCAAAGCCAA+TGG - chr7.1:19032661-19032680 MS.gene067859:CDS 40.0%
!! TTTCCTTTGGAATGTGCATG+GGG - chr7.1:19032859-19032878 MS.gene067859:CDS 40.0%
!!! CATCGATTTTGTGGAGCATA+TGG + chr7.1:19033388-19033407 None:intergenic 40.0%
AAGCTTGCAATCCATGCCAT+TGG + chr7.1:19033347-19033366 None:intergenic 45.0%
AATCCCCATGCACATTCCAA+AGG + chr7.1:19032865-19032884 None:intergenic 45.0%
ACCAGTGTAGATCTTGTCTG+AGG + chr7.1:19033203-19033222 None:intergenic 45.0%
AGAAGCTGACAGCAGTAATC+TGG + chr7.1:19033174-19033193 None:intergenic 45.0%
ATGGAAGCAAGGTTACAGCT+GGG - chr7.1:19033476-19033495 MS.gene067859:CDS 45.0%
ATGGGATTTGCGTAAAGGTG+AGG - chr7.1:19033246-19033265 MS.gene067859:CDS 45.0%
CATGCCATTGGTAAGAAGGT+AGG + chr7.1:19033335-19033354 None:intergenic 45.0%
CTACCTTCTTACCAATGGCA+TGG - chr7.1:19033333-19033352 MS.gene067859:CDS 45.0%
GAACATGCTCTGTCAGTTGT+TGG - chr7.1:19032647-19032666 MS.gene067859:CDS 45.0%
GAGGTTACCATGACACTTCA+AGG - chr7.1:19033265-19033284 MS.gene067859:CDS 45.0%
GATCTTCACTGGACTTCAGA+TGG - chr7.1:19032929-19032948 MS.gene067859:CDS 45.0%
GGTTCCTACCTTCTTACCAA+TGG - chr7.1:19033328-19033347 MS.gene067859:CDS 45.0%
GTAAGAAGGTAGGAACCATC+AGG + chr7.1:19033325-19033344 None:intergenic 45.0%
TATAAGCTACCTGGGCACAA+TGG - chr7.1:19033550-19033569 MS.gene067859:CDS 45.0%
TCAGACAAGATCTACACTGG+TGG - chr7.1:19033202-19033221 MS.gene067859:CDS 45.0%
TCTCCAATCATGTTGCTGAC+TGG - chr7.1:19032758-19032777 MS.gene067859:CDS 45.0%
TGACCAGTCAGCAACATGAT+TGG + chr7.1:19032764-19032783 None:intergenic 45.0%
TTAACAGATCCATTGTGCCC+AGG + chr7.1:19033562-19033581 None:intergenic 45.0%
! AAAGCAGCGGACTTCAAGTT+TGG - chr7.1:19032733-19032752 MS.gene067859:CDS 45.0%
ACAGGATCAGTCGTTGCATC+TGG - chr7.1:19032818-19032837 MS.gene067859:CDS 50.0%
CCAGCCCTGATAAAACACTC+AGG - chr7.1:19032969-19032988 MS.gene067859:CDS 50.0%
GATGCAACGACTGATCCTGT+TGG + chr7.1:19032818-19032837 None:intergenic 50.0%
GATGGAAGCAAGGTTACAGC+TGG - chr7.1:19033475-19033494 MS.gene067859:CDS 50.0%
GCCTCAGACAAGATCTACAC+TGG - chr7.1:19033199-19033218 MS.gene067859:CDS 50.0%
GCTGTAACCTTGCTTCCATC+AGG + chr7.1:19033475-19033494 None:intergenic 50.0%
GGCACAGTAGACCATTCCAT+TGG + chr7.1:19032680-19032699 None:intergenic 50.0%
TCAACAGTTGCTGTCCTTCC+CGG - chr7.1:19033050-19033069 MS.gene067859:CDS 50.0%
TCAGAGCCACTGACAACAAG+AGG + chr7.1:19033085-19033104 None:intergenic 50.0%
! AAATGTGGCTGGTCACCTGA+TGG - chr7.1:19033457-19033476 MS.gene067859:CDS 50.0%
! AGCTGGGAGTTCTGATCGAA+TGG - chr7.1:19033492-19033511 MS.gene067859:CDS 50.0%
! CCTGAGTGTTTTATCAGGGC+TGG + chr7.1:19032972-19032991 None:intergenic 50.0%
! GAAGTCCGCTGCTTTCCATT+TGG + chr7.1:19032728-19032747 None:intergenic 50.0%
!! GTTGTCAGTGGCTCTGATGA+TGG - chr7.1:19033088-19033107 MS.gene067859:CDS 50.0%
ACAATGCTCCTCGTGCTCCT+GGG - chr7.1:19032702-19032721 MS.gene067859:CDS 55.0%
CTGGGCCAAATGGAAAGCAG+CGG - chr7.1:19032720-19032739 MS.gene067859:CDS 55.0%
CTGGTCACCTGATGGAAGCA+AGG - chr7.1:19033465-19033484 MS.gene067859:CDS 55.0%
GAGCCACTGACAACAAGAGG+TGG + chr7.1:19033082-19033101 None:intergenic 55.0%
TACAATGCTCCTCGTGCTCC+TGG - chr7.1:19032701-19032720 MS.gene067859:CDS 55.0%
!! GGAGCACGAGGAGCATTGTA+TGG + chr7.1:19032701-19032720 None:intergenic 55.0%
ACAGTTGCTGTCCTTCCCGG+AGG - chr7.1:19033053-19033072 MS.gene067859:CDS 60.0%
AGTTGCTGTCCTTCCCGGAG+GGG - chr7.1:19033055-19033074 MS.gene067859:CDS 60.0%
CAGTTGCTGTCCTTCCCGGA+GGG - chr7.1:19033054-19033073 MS.gene067859:CDS 60.0%
! CGCTGCTTTCCATTTGGCCC+AGG + chr7.1:19032722-19032741 None:intergenic 60.0%
! GGGCCACCTCTTGTTGTCAG+TGG - chr7.1:19033076-19033095 MS.gene067859:CDS 60.0%
AACAAGAGGTGGCCCCCTCC+GGG + chr7.1:19033071-19033090 None:intergenic 65.0%
CAACAAGAGGTGGCCCCCTC+CGG + chr7.1:19033072-19033091 None:intergenic 65.0%
CCTCGTGCTCCTGGGCCAAA+TGG - chr7.1:19032710-19032729 MS.gene067859:CDS 65.0%
GTTGCTGTCCTTCCCGGAGG+GGG - chr7.1:19033056-19033075 MS.gene067859:CDS 65.0%
! CCATTTGGCCCAGGAGCACG+AGG + chr7.1:19032713-19032732 None:intergenic 65.0%
AGAGGTGGCCCCCTCCGGGA+AGG + chr7.1:19033067-19033086 None:intergenic 75.0%


Chromosome Type Strat End Strand Name
chr7.1 gene 19032623 19033660 19032623 ID=MS.gene067859
chr7.1 mRNA 19032623 19033660 19032623 ID=MS.gene067859.t1;Parent=MS.gene067859
chr7.1 exon 19032623 19033660 19032623 ID=MS.gene067859.t1.exon1;Parent=MS.gene067859.t1
chr7.1 CDS 19032623 19033660 19032623 ID=cds.MS.gene067859.t1;Parent=MS.gene067859.t1
Gene Sequence

>MS.gene067859

ATGCAAGGTTTTCCTGGTGAAAATGAACATGCTCTGTCAGTTGTTGGTTCAAAGCCAATGGAATGGTCTACTGTGCCATACAATGCTCCTCGTGCTCCTGGGCCAAATGGAAAGCAGCGGACTTCAAGTTTGGAATCTCCAATCATGTTGCTGACTGGTCACCAGAGTGCTGTATATACCATGAAGTTCAATCCAACAGGATCAGTCGTTGCATCTGGATCGCATGACAGAGAAATTTTCCTTTGGAATGTGCATGGGGATTGCAAGAACTTTATGGTTCTAAAAGGTCACAAGAATGCTGTTTTAGATCTTCACTGGACTTCAGATGGGACACAGATTATCTCTGCCAGCCCTGATAAAACACTCAGGTTATGGGATACAGAAACAGGAAAACAAATCAAAAAGATGGTAGAGCATCTCTCGTATGTCAACAGTTGCTGTCCTTCCCGGAGGGGGCCACCTCTTGTTGTCAGTGGCTCTGATGATGGAACAGCAAAATTATGGGATATGCGTCAAAGGGGCTCCATCCAAACATTTCCTGATAAATACCAGATTACTGCTGTCAGCTTCTCTGATGCCTCAGACAAGATCTACACTGGTGGTATTGATAATGATGTCAAGATATGGGATTTGCGTAAAGGTGAGGTTACCATGACACTTCAAGGTCATCAAGATATGATTACAAGTATGCAATTGAGTCCTGATGGTTCCTACCTTCTTACCAATGGCATGGATTGCAAGCTTTGCATTTGGGATATGCGCCCATATGCTCCACAAAATCGATGTGTGAAGATTTTGGAAGGGCATCAACACAACTTTGAGAAGAATTTGTTGAAATGTGGCTGGTCACCTGATGGAAGCAAGGTTACAGCTGGGAGTTCTGATCGAATGGTTTACATCTGGGATACCACTTCTCGAAGAATATTGTATAAGCTACCTGGGCACAATGGATCTGTTAATGAGTGTGTTTTCCATCCCAATGAACCTATTGTTGGATCATGTAGCAGTGACAAGCAGATTTATCTTGGGGAGATATGA

Protein sequence

>MS.gene067859.t1

MQGFPGENEHALSVVGSKPMEWSTVPYNAPRAPGPNGKQRTSSLESPIMLLTGHQSAVYTMKFNPTGSVVASGSHDREIFLWNVHGDCKNFMVLKGHKNAVLDLHWTSDGTQIISASPDKTLRLWDTETGKQIKKMVEHLSYVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGSIQTFPDKYQITAVSFSDASDKIYTGGIDNDVKIWDLRKGEVTMTLQGHQDMITSMQLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPDGSKVTAGSSDRMVYIWDTTSRRILYKLPGHNGSVNECVFHPNEPIVGSCSSDKQIYLGEI