AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene042467


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene042467.t1 MTR_7g086360 99.710 345 1 0 1 345 1 345 0.0 721
MS.gene042467.t1 MTR_4g119620 30.693 303 190 9 51 340 23 318 2.63e-38 139
MS.gene042467.t1 MTR_4g119620 28.517 263 171 7 46 301 69 321 2.13e-24 102
MS.gene042467.t1 MTR_1g072140 31.142 289 190 7 51 337 23 304 7.28e-35 130
MS.gene042467.t1 MTR_1g072140 28.148 270 173 9 41 301 55 312 7.83e-25 102
MS.gene042467.t1 MTR_3g075400 28.364 275 190 3 51 324 221 489 9.36e-29 116
MS.gene042467.t1 MTR_4g104380 27.574 272 192 2 51 322 226 492 3.44e-28 115
MS.gene042467.t1 MTR_4g104380 27.619 210 137 6 51 251 310 513 2.23e-15 77.4
MS.gene042467.t1 MTR_8g092620 27.090 299 199 7 47 340 10 294 1.58e-27 110
MS.gene042467.t1 MTR_8g092620 23.585 212 145 5 48 251 95 297 1.37e-11 64.7
MS.gene042467.t1 MTR_8g092620 26.923 312 205 8 38 340 4 301 2.06e-27 110
MS.gene042467.t1 MTR_1g054300 28.618 304 183 11 51 342 115 396 2.69e-27 112
MS.gene042467.t1 MTR_1g054300 26.621 293 162 7 51 301 200 481 8.49e-22 96.3
MS.gene042467.t1 MTR_1g054300 22.287 341 211 7 45 342 151 480 1.39e-19 89.7
MS.gene042467.t1 MTR_4g102520 26.730 318 220 9 32 340 268 581 9.29e-27 111
MS.gene042467.t1 MTR_6g004040 26.977 215 148 4 127 340 3 209 1.00e-25 108
MS.gene042467.t1 MTR_6g004040 25.969 258 172 7 51 302 12 256 1.22e-21 96.7
MS.gene042467.t1 MTR_6g004040 29.148 223 146 6 48 267 52 265 5.70e-17 82.4
MS.gene042467.t1 MTR_3g106080 29.004 231 155 4 50 279 414 636 2.79e-24 104
MS.gene042467.t1 MTR_3g106080 28.333 240 154 5 86 320 407 633 3.75e-21 95.1
MS.gene042467.t1 MTR_3g106080 26.368 201 142 4 41 237 447 645 5.48e-16 79.3
MS.gene042467.t1 MTR_3g106080 23.902 205 144 4 142 345 423 616 9.26e-14 72.8
MS.gene042467.t1 MTR_8g467040 26.948 308 205 9 51 344 115 416 3.36e-24 102
MS.gene042467.t1 MTR_2g012630 26.636 214 148 3 130 342 5 210 1.04e-23 102
MS.gene042467.t1 MTR_2g012630 26.267 217 148 5 113 327 31 237 1.52e-17 84.3
MS.gene042467.t1 MTR_2g012630 27.184 206 142 5 51 252 54 255 1.15e-11 66.6
MS.gene042467.t1 MTR_2g012630 26.636 214 148 3 130 342 5 210 1.12e-23 102
MS.gene042467.t1 MTR_2g012630 26.267 217 148 5 113 327 31 237 1.58e-17 84.3
MS.gene042467.t1 MTR_2g012630 27.184 206 142 5 51 252 54 255 1.05e-11 66.6
MS.gene042467.t1 MTR_5g022690 30.531 226 144 6 82 305 265 479 7.49e-23 99.4
MS.gene042467.t1 MTR_5g022690 26.442 208 149 4 46 251 270 475 6.06e-18 85.1
MS.gene042467.t1 MTR_5g022690 26.506 166 112 4 164 328 261 417 1.11e-12 69.3
MS.gene042467.t1 MTR_5g016350 27.481 262 168 7 51 302 331 580 1.08e-21 96.3
MS.gene042467.t1 MTR_5g016350 27.027 333 192 11 44 342 222 537 2.99e-21 95.1
MS.gene042467.t1 MTR_5g016350 22.517 302 193 8 58 340 297 576 8.78e-18 84.7
MS.gene042467.t1 MTR_5g016350 33.714 175 105 4 47 212 410 582 2.50e-15 77.4
MS.gene042467.t1 MTR_5g016350 27.481 262 168 7 51 302 267 516 1.94e-21 95.5
MS.gene042467.t1 MTR_5g016350 27.027 333 192 11 44 342 158 473 4.04e-21 94.7
MS.gene042467.t1 MTR_5g016350 22.517 302 193 8 58 340 233 512 1.64e-17 84.0
MS.gene042467.t1 MTR_5g016350 33.714 175 105 4 47 212 346 518 3.65e-15 76.6
MS.gene042467.t1 MTR_1g097140 25.753 299 204 7 51 345 119 403 5.13e-21 93.6
MS.gene042467.t1 MTR_1g097140 25.238 210 150 4 48 254 199 404 3.63e-16 79.3
MS.gene042467.t1 MTR_5g016370 26.994 326 199 11 44 342 236 549 5.84e-21 94.4
MS.gene042467.t1 MTR_5g016370 25.573 262 173 7 51 302 343 592 2.23e-20 92.4
MS.gene042467.t1 MTR_5g016370 32.000 175 108 4 47 212 422 594 9.77e-15 75.5
MS.gene042467.t1 MTR_4g095058 25.414 362 211 12 13 342 198 532 7.80e-21 94.0
MS.gene042467.t1 MTR_4g095058 23.954 263 176 8 51 302 326 575 3.11e-18 86.3
MS.gene042467.t1 MTR_4g095058 30.286 175 111 3 47 212 405 577 3.93e-14 73.6
MS.gene042467.t1 MTR_1g072740 26.103 272 189 8 32 295 267 534 1.92e-20 92.8
MS.gene042467.t1 MTR_1g069345 25.733 307 199 9 50 342 211 502 2.45e-20 92.0
MS.gene042467.t1 MTR_2g436510 24.786 351 216 12 3 341 119 433 2.69e-20 92.0
MS.gene042467.t1 MTR_2g436510 24.845 161 113 2 185 345 173 325 6.69e-13 69.7
MS.gene042467.t1 MTR_3g449990 23.026 304 213 11 48 342 263 554 3.05e-20 92.0
MS.gene042467.t1 MTR_4g095058 24.863 366 216 12 9 342 192 530 4.30e-20 91.7
MS.gene042467.t1 MTR_4g095058 23.954 263 176 8 51 302 324 573 4.01e-18 85.9
MS.gene042467.t1 MTR_4g095058 30.286 175 111 3 47 212 403 575 4.38e-14 73.6
MS.gene042467.t1 MTR_5g090420 22.848 302 215 10 48 342 257 547 8.82e-20 90.9
MS.gene042467.t1 MTR_6g005220 27.500 240 136 7 96 301 106 341 9.24e-20 90.5
MS.gene042467.t1 MTR_8g092620 27.570 214 142 5 48 256 11 216 1.25e-18 84.0
MS.gene042467.t1 MTR_8g092620 27.219 169 117 4 89 254 9 174 8.79e-11 61.6
MS.gene042467.t1 MTR_8g106790 32.308 195 120 6 69 253 30 222 1.69e-18 85.5
MS.gene042467.t1 MTR_8g106790 29.348 276 164 13 47 301 55 320 2.72e-18 84.7
MS.gene042467.t1 MTR_8g106790 25.991 227 146 9 113 328 31 246 6.38e-13 68.9
MS.gene042467.t1 MTR_8g045440 25.588 340 189 13 61 342 29 362 7.19e-18 84.7
MS.gene042467.t1 MTR_8g038550 24.662 296 198 10 51 337 179 458 1.04e-17 84.7
MS.gene042467.t1 MTR_8g038550 24.806 258 177 8 49 301 219 464 5.36e-15 76.6
MS.gene042467.t1 MTR_3g045130 28.972 214 146 5 48 258 307 517 1.70e-17 84.0
MS.gene042467.t1 MTR_3g045130 25.000 224 158 4 106 328 280 494 2.62e-17 83.2
MS.gene042467.t1 MTR_3g045130 26.289 194 138 5 63 254 280 470 2.34e-11 65.1
MS.gene042467.t1 MTR_8g045440 25.588 340 189 13 61 342 29 362 2.63e-17 83.2
MS.gene042467.t1 MTR_2g020720 24.927 341 197 11 56 340 107 444 4.17e-17 82.4
MS.gene042467.t1 MTR_2g019400 29.240 171 107 4 158 328 15 171 8.53e-17 79.7
MS.gene042467.t1 MTR_2g019400 21.456 261 176 6 61 301 1 252 4.75e-13 68.9
MS.gene042467.t1 MTR_2g019400 20.994 181 118 3 53 209 73 252 3.29e-11 63.5
MS.gene042467.t1 MTR_3g116500 29.434 265 157 11 60 301 2 259 9.26e-17 79.3
MS.gene042467.t1 MTR_3g116500 27.727 220 140 7 50 251 41 259 4.39e-16 77.4
MS.gene042467.t1 MTR_3g116500 29.588 267 158 11 58 301 110 369 1.28e-16 80.5
MS.gene042467.t1 MTR_3g116500 27.727 220 140 7 50 251 151 369 1.10e-15 77.8
MS.gene042467.t1 MTR_3g116500 21.786 280 195 8 51 312 61 334 1.01e-12 68.9
MS.gene042467.t1 MTR_4g071130 24.312 218 127 5 154 342 22 230 1.22e-15 78.6
MS.gene042467.t1 MTR_4g071130 23.188 276 181 7 91 340 2 272 6.45e-12 67.4
MS.gene042467.t1 MTR_4g071130 23.320 253 172 7 54 306 50 280 2.35e-11 65.5
MS.gene042467.t1 MTR_1g050340 23.050 282 201 8 63 342 517 784 1.27e-15 78.6
MS.gene042467.t1 MTR_1g050340 23.050 282 201 8 63 342 518 785 1.29e-15 78.6
MS.gene042467.t1 MTR_2g102267 26.667 210 149 4 55 260 59 267 1.42e-15 76.6
MS.gene042467.t1 MTR_7g076230 23.288 292 206 9 45 320 359 648 1.54e-15 78.2
MS.gene042467.t1 MTR_7g076230 21.147 279 190 8 48 314 319 579 5.75e-14 73.6
MS.gene042467.t1 MTR_7g076230 24.324 185 131 3 163 345 349 526 2.12e-13 71.6
MS.gene042467.t1 MTR_1g089290 22.843 394 234 12 16 340 73 465 2.13e-15 77.4
MS.gene042467.t1 MTR_1g090827 24.424 217 124 6 154 340 22 228 4.17e-15 77.0
MS.gene042467.t1 MTR_1g090827 24.901 253 168 7 54 306 50 280 7.66e-12 67.0
MS.gene042467.t1 MTR_1g090827 22.656 256 167 6 113 342 24 274 1.41e-11 66.2
MS.gene042467.t1 MTR_3g067940 23.585 212 156 3 48 255 248 457 6.31e-15 75.9
MS.gene042467.t1 MTR_4g123597 33.607 122 79 2 51 172 102 221 7.03e-15 76.3
MS.gene042467.t1 MTR_2g054920 26.000 300 160 9 92 342 10 296 8.77e-15 74.7
MS.gene042467.t1 MTR_4g105700 23.509 285 192 8 51 319 355 629 1.02e-14 75.9
MS.gene042467.t1 MTR_4g105700 27.329 161 114 3 50 209 495 653 4.05e-14 73.9
MS.gene042467.t1 MTR_8g045463 23.684 342 195 12 61 342 29 364 2.28e-14 74.3
MS.gene042467.t1 MTR_8g045470 23.684 342 195 12 61 342 29 364 2.28e-14 74.3
MS.gene042467.t1 MTR_4g111810 21.843 293 212 6 58 342 70 353 2.60e-14 73.9
MS.gene042467.t1 MTR_2g016160 29.452 146 99 4 112 253 122 267 3.02e-14 72.8
MS.gene042467.t1 MTR_4g111810 21.843 293 212 6 58 342 70 353 3.28e-14 73.6
MS.gene042467.t1 MTR_2g085210 26.482 253 174 7 58 301 568 817 4.37e-14 73.9
MS.gene042467.t1 MTR_8g027985 23.864 264 183 8 51 301 646 904 4.39e-14 73.9
MS.gene042467.t1 MTR_8g041740 23.669 338 198 12 61 342 29 362 5.13e-14 73.2
MS.gene042467.t1 MTR_1g081830 22.968 283 200 7 72 345 57 330 6.96e-14 73.2
MS.gene042467.t1 MTR_4g125710 25.604 207 132 4 48 236 95 297 7.85e-14 71.6
MS.gene042467.t1 MTR_4g125710 23.197 319 203 8 53 342 12 317 3.93e-13 69.7
MS.gene042467.t1 MTR_1g081830 23.322 283 199 7 72 345 29 302 8.07e-14 72.8
MS.gene042467.t1 MTR_3g107910 22.569 288 208 7 56 342 622 895 1.08e-13 72.8
MS.gene042467.t1 MTR_3g107910 22.569 288 208 7 56 342 629 902 1.12e-13 72.8
MS.gene042467.t1 MTR_4g077783 20.478 293 216 6 58 342 9 292 1.53e-13 71.6
MS.gene042467.t1 MTR_2g016690 24.473 237 159 6 47 270 85 314 1.58e-13 70.9
MS.gene042467.t1 MTR_2g016690 24.648 284 189 9 56 325 51 323 2.43e-13 70.5
MS.gene042467.t1 MTR_2g016690 23.891 293 188 10 69 342 22 298 8.65e-12 65.9
MS.gene042467.t1 MTR_1g011610 22.378 286 211 7 58 342 625 900 1.94e-13 72.0
MS.gene042467.t1 MTR_1g011610 25.523 239 159 9 94 326 618 843 2.18e-11 65.5
MS.gene042467.t1 MTR_3g061450 21.141 298 218 7 52 344 16 301 1.95e-13 70.5
MS.gene042467.t1 MTR_2g014020 21.345 342 246 11 7 342 198 522 2.37e-13 71.2
MS.gene042467.t1 MTR_2g034500 25.806 217 129 5 48 233 234 449 3.10e-13 71.6
MS.gene042467.t1 MTR_1g021590 27.624 181 117 5 97 269 218 392 4.13e-13 70.5
MS.gene042467.t1 MTR_1g044720 25.954 262 177 9 48 301 257 509 4.32e-13 70.5
MS.gene042467.t1 MTR_3g052220 30.952 126 86 1 54 179 263 387 4.91e-13 70.1
MS.gene042467.t1 MTR_3g052220 24.528 159 109 3 106 254 222 379 8.31e-13 69.7
MS.gene042467.t1 MTR_8g092890 23.488 281 174 10 51 302 226 494 6.38e-13 70.1
MS.gene042467.t1 MTR_1g087120 33.071 127 80 3 48 171 319 443 1.27e-12 69.7
MS.gene042467.t1 MTR_7g099170 25.764 229 139 6 50 250 231 456 3.20e-12 67.8
MS.gene042467.t1 MTR_5g085250 26.562 192 130 6 112 301 437 619 3.47e-12 67.8
MS.gene042467.t1 MTR_7g099170 25.764 229 139 6 50 250 203 428 3.61e-12 67.4
MS.gene042467.t1 MTR_5g085250 27.979 193 126 7 112 301 333 515 4.77e-12 67.4
MS.gene042467.t1 MTR_5g085250 27.979 193 126 7 112 301 300 482 5.12e-12 67.0
MS.gene042467.t1 MTR_2g087640 27.429 175 109 3 88 245 136 309 5.97e-12 66.2
MS.gene042467.t1 MTR_2g087640 25.431 232 150 6 92 309 4 226 5.21e-11 63.5
MS.gene042467.t1 MTR_7g451830 23.832 214 151 4 50 253 203 414 1.03e-11 65.9
MS.gene042467.t1 MTR_7g047640 23.832 214 151 4 50 253 203 414 1.03e-11 65.9
MS.gene042467.t1 MTR_1g011610 23.762 303 195 11 47 326 545 834 1.12e-11 66.6
MS.gene042467.t1 MTR_7g057540 22.936 218 149 6 50 253 192 404 1.29e-11 65.9
MS.gene042467.t1 MTR_7g055590 22.222 243 158 7 50 266 192 429 1.49e-11 65.9
MS.gene042467.t1 MTR_4g007500 24.138 174 119 2 83 245 185 356 1.83e-11 65.1
MS.gene042467.t1 MTR_2g102277 28.313 166 114 4 48 209 92 256 2.04e-11 65.9
MS.gene042467.t1 MTR_2g102277 28.313 166 114 4 48 209 92 256 2.10e-11 65.5
MS.gene042467.t1 MTR_8g093540 29.496 139 92 2 35 168 44 181 2.21e-11 65.5
MS.gene042467.t1 MTR_4g011950 28.313 166 114 4 48 209 92 256 2.47e-11 65.5
MS.gene042467.t1 MTR_2g060710 23.364 214 152 5 51 253 214 426 4.17e-11 64.3
MS.gene042467.t1 MTR_8g100005 24.091 220 147 6 94 304 368 576 5.99e-11 63.9
MS.gene042467.t1 MTR_6g005920 23.868 243 138 7 97 301 48 281 7.60e-11 63.2
MS.gene042467.t1 MTR_5g008010 22.857 210 150 4 53 252 220 427 9.77e-11 63.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene042467.t1 AT2G43770 82.899 345 57 1 1 345 1 343 0.0 622
MS.gene042467.t1 AT3G49660 30.537 298 195 6 51 342 20 311 8.39e-42 148
MS.gene042467.t1 AT3G49660 26.364 220 143 6 46 254 104 315 1.88e-21 93.6
MS.gene042467.t1 AT4G02730 29.932 294 180 11 51 333 39 317 4.38e-32 123
MS.gene042467.t1 AT4G02730 27.488 211 144 5 48 251 121 329 9.75e-20 89.0
MS.gene042467.t1 AT5G52820 30.820 305 175 13 51 342 105 386 1.52e-28 115
MS.gene042467.t1 AT5G52820 25.138 362 167 10 35 301 119 471 2.62e-21 95.1
MS.gene042467.t1 AT5G64730 27.243 301 194 9 50 342 13 296 4.26e-27 108
MS.gene042467.t1 AT5G64730 25.000 212 142 5 48 251 95 297 4.88e-12 66.2
MS.gene042467.t1 AT5G08390 26.852 216 149 4 126 340 2 209 8.22e-27 112
MS.gene042467.t1 AT5G08390 24.903 257 176 7 51 302 12 256 3.11e-20 92.4
MS.gene042467.t1 AT5G08390 25.667 300 181 9 48 314 52 342 1.99e-14 75.1
MS.gene042467.t1 AT5G23430 26.267 217 151 4 127 342 3 211 1.21e-25 108
MS.gene042467.t1 AT5G23430 24.335 263 170 8 51 302 12 256 1.21e-20 93.6
MS.gene042467.t1 AT5G23430 27.488 211 145 5 48 255 52 257 5.92e-14 73.6
MS.gene042467.t1 AT5G23430 26.267 217 151 4 127 342 3 211 1.39e-25 108
MS.gene042467.t1 AT5G23430 24.335 263 170 8 51 302 12 256 1.41e-20 93.6
MS.gene042467.t1 AT5G23430 27.488 211 145 5 48 255 52 257 6.72e-14 73.2
MS.gene042467.t1 AT5G23430 26.267 217 151 4 127 342 3 211 1.39e-25 108
MS.gene042467.t1 AT5G23430 24.335 263 170 8 51 302 12 256 1.41e-20 93.6
MS.gene042467.t1 AT5G23430 27.488 211 145 5 48 255 52 257 6.72e-14 73.2
MS.gene042467.t1 AT1G10580 25.170 294 212 7 52 340 279 569 2.09e-24 104
MS.gene042467.t1 AT5G25150 27.935 247 162 5 34 279 404 635 4.37e-24 103
MS.gene042467.t1 AT5G25150 27.562 283 164 7 67 321 364 633 9.85e-22 96.7
MS.gene042467.t1 AT5G25150 24.490 196 137 4 153 345 428 615 2.96e-13 71.2
MS.gene042467.t1 AT5G25150 27.935 247 162 5 34 279 404 635 4.47e-24 103
MS.gene042467.t1 AT5G25150 27.562 283 164 7 67 321 364 633 1.02e-21 96.7
MS.gene042467.t1 AT5G25150 24.490 196 137 4 153 345 428 615 3.09e-13 71.2
MS.gene042467.t1 AT2G41500 27.413 259 175 6 48 304 291 538 4.30e-23 100
MS.gene042467.t1 AT2G41500 25.088 283 198 7 63 342 263 534 1.51e-18 87.0
MS.gene042467.t1 AT2G41500 27.638 199 132 6 143 339 258 446 1.26e-12 69.3
MS.gene042467.t1 AT2G41500 27.413 259 175 6 48 304 291 538 4.30e-23 100
MS.gene042467.t1 AT2G41500 25.088 283 198 7 63 342 263 534 1.51e-18 87.0
MS.gene042467.t1 AT2G41500 27.638 199 132 6 143 339 258 446 1.26e-12 69.3
MS.gene042467.t1 AT5G08560 24.667 300 209 10 50 342 269 558 3.98e-22 97.8
MS.gene042467.t1 AT5G08560 24.667 300 209 10 50 342 269 558 3.98e-22 97.8
MS.gene042467.t1 AT5G08560 24.667 300 209 10 50 342 269 558 3.98e-22 97.8
MS.gene042467.t1 AT1G61210 24.057 212 152 3 130 340 5 208 4.20e-22 98.2
MS.gene042467.t1 AT1G61210 26.971 241 160 6 66 302 27 255 8.50e-22 97.4
MS.gene042467.t1 AT1G61210 25.346 217 150 5 113 327 31 237 4.36e-17 83.2
MS.gene042467.t1 AT1G61210 27.230 213 143 6 48 255 51 256 6.55e-13 70.5
MS.gene042467.t1 AT5G50230 24.521 261 192 2 53 313 223 478 5.51e-22 97.1
MS.gene042467.t1 AT5G50230 29.048 210 134 6 51 251 305 508 2.13e-15 77.4
MS.gene042467.t1 AT1G61210 24.057 212 152 3 130 340 5 208 7.25e-22 97.4
MS.gene042467.t1 AT1G61210 26.971 241 160 6 66 302 27 255 1.40e-21 96.7
MS.gene042467.t1 AT1G61210 25.346 217 150 5 113 327 31 237 7.39e-17 82.4
MS.gene042467.t1 AT1G61210 27.230 213 143 6 48 255 51 256 1.15e-12 69.7
MS.gene042467.t1 AT1G61210 24.057 212 152 3 130 340 5 208 8.02e-22 97.4
MS.gene042467.t1 AT1G61210 26.971 241 160 6 66 302 27 255 1.41e-21 96.7
MS.gene042467.t1 AT1G61210 25.346 217 150 5 113 327 31 237 7.81e-17 82.4
MS.gene042467.t1 AT1G61210 27.230 213 143 6 48 255 51 256 1.06e-12 69.7
MS.gene042467.t1 AT1G11160 24.528 212 151 3 130 340 5 208 1.47e-21 96.7
MS.gene042467.t1 AT1G11160 26.556 241 161 6 66 302 27 255 1.94e-21 96.3
MS.gene042467.t1 AT1G11160 24.658 219 149 5 113 327 31 237 4.55e-16 80.1
MS.gene042467.t1 AT1G11160 27.885 208 146 4 49 255 52 256 2.50e-13 71.6
MS.gene042467.t1 AT1G11160 26.506 166 112 6 48 209 93 252 1.07e-11 66.6
MS.gene042467.t1 AT1G11160 24.528 212 151 3 130 340 5 208 1.65e-21 96.3
MS.gene042467.t1 AT1G11160 26.556 241 161 6 66 302 27 255 2.01e-21 96.3
MS.gene042467.t1 AT1G11160 24.658 219 149 5 113 327 31 237 4.65e-16 80.1
MS.gene042467.t1 AT1G11160 27.885 208 146 4 49 255 52 256 2.42e-13 71.6
MS.gene042467.t1 AT1G11160 26.506 166 112 6 48 209 93 252 1.19e-11 66.6
MS.gene042467.t1 AT1G11160 24.528 212 151 3 130 340 5 208 1.68e-21 96.3
MS.gene042467.t1 AT1G11160 26.556 241 161 6 66 302 27 255 2.32e-21 95.9
MS.gene042467.t1 AT1G11160 24.658 219 149 5 113 327 31 237 4.59e-16 80.1
MS.gene042467.t1 AT1G11160 27.885 208 146 4 49 255 52 256 2.71e-13 71.6
MS.gene042467.t1 AT1G11160 26.506 166 112 6 48 209 93 252 1.28e-11 66.2
MS.gene042467.t1 AT3G16650 25.763 295 189 10 50 341 165 432 7.78e-21 93.6
MS.gene042467.t1 AT3G16650 25.146 171 125 3 85 254 157 325 1.97e-13 71.6
MS.gene042467.t1 AT5G54520 25.538 325 221 11 35 344 139 457 2.77e-20 92.0
MS.gene042467.t1 AT5G67320 26.911 327 200 10 46 345 256 570 3.70e-20 92.0
MS.gene042467.t1 AT5G67320 23.301 309 210 10 9 302 314 610 5.56e-19 88.6
MS.gene042467.t1 AT5G67320 29.714 175 112 3 47 212 440 612 4.72e-14 73.6
MS.gene042467.t1 AT3G18130 29.123 285 172 9 69 341 30 296 4.22e-20 90.1
MS.gene042467.t1 AT3G18130 30.515 272 159 13 51 301 59 321 6.42e-19 86.7
MS.gene042467.t1 AT3G18130 27.632 228 141 6 51 256 101 326 4.64e-16 78.6
MS.gene042467.t1 AT1G48630 31.959 194 122 4 69 253 30 222 1.90e-19 88.2
MS.gene042467.t1 AT1G48630 27.407 270 170 11 51 301 59 321 3.28e-17 81.6
MS.gene042467.t1 AT1G48630 26.316 228 144 6 51 256 101 326 8.45e-15 74.7
MS.gene042467.t1 AT1G48630 25.692 253 161 11 92 328 5 246 4.47e-14 72.4
MS.gene042467.t1 AT1G18080 29.572 257 154 9 69 312 30 272 2.34e-19 87.8
MS.gene042467.t1 AT1G18080 27.778 270 170 11 51 301 59 322 4.46e-17 81.3
MS.gene042467.t1 AT1G18080 26.638 229 143 6 51 256 101 327 1.01e-14 74.3
MS.gene042467.t1 AT1G18080 27.165 254 157 11 92 328 5 247 1.02e-14 74.3
MS.gene042467.t1 AT5G13480 24.232 293 203 9 51 337 130 409 6.26e-19 88.6
MS.gene042467.t1 AT5G13480 24.232 293 203 9 51 337 107 386 6.63e-19 88.2
MS.gene042467.t1 AT5G13480 24.232 293 203 9 51 337 107 386 6.98e-19 88.2
MS.gene042467.t1 AT5G13480 24.232 293 203 9 51 337 119 398 7.33e-19 88.2
MS.gene042467.t1 AT4G15900 25.170 294 193 9 50 341 171 439 1.15e-18 87.4
MS.gene042467.t1 AT4G15900 25.731 171 125 2 85 254 163 332 6.17e-16 79.0
MS.gene042467.t1 AT4G15900 27.143 210 139 5 131 337 167 365 8.43e-15 75.5
MS.gene042467.t1 AT5G43920 24.679 312 195 9 48 339 217 508 2.47e-18 86.3
MS.gene042467.t1 AT1G15440 23.077 273 157 7 45 315 339 560 3.35e-18 86.3
MS.gene042467.t1 AT1G15440 24.623 199 141 3 149 345 315 506 2.11e-12 68.6
MS.gene042467.t1 AT1G15440 23.077 273 157 7 45 315 379 600 3.81e-18 86.3
MS.gene042467.t1 AT1G15440 24.623 199 141 3 149 345 355 546 2.36e-12 68.6
MS.gene042467.t1 AT3G15354 27.925 265 169 8 51 301 280 536 1.22e-17 84.3
MS.gene042467.t1 AT3G15354 27.925 265 169 8 51 301 280 536 1.22e-17 84.3
MS.gene042467.t1 AT1G11160 25.641 156 108 2 185 340 19 166 1.24e-17 84.7
MS.gene042467.t1 AT1G11160 26.554 177 115 4 155 327 30 195 4.41e-16 80.1
MS.gene042467.t1 AT1G11160 27.670 206 145 4 51 255 12 214 5.37e-13 70.5
MS.gene042467.t1 AT1G11160 26.506 166 112 6 48 209 51 210 1.00e-11 66.6
MS.gene042467.t1 AT3G15354 27.925 265 169 8 51 301 530 786 1.39e-17 84.3
MS.gene042467.t1 AT4G03020 23.821 403 234 11 8 340 68 467 1.52e-17 84.0
MS.gene042467.t1 AT4G03020 23.821 403 234 11 8 340 68 467 1.52e-17 84.0
MS.gene042467.t1 AT4G03020 23.821 403 234 11 8 340 68 467 1.52e-17 84.0
MS.gene042467.t1 AT1G71840 22.571 350 210 10 45 344 60 398 3.43e-17 82.4
MS.gene042467.t1 AT1G71840 23.874 222 161 4 45 261 187 405 2.41e-16 80.1
MS.gene042467.t1 AT3G27640 25.085 295 167 8 96 345 126 411 1.19e-16 81.3
MS.gene042467.t1 AT3G27640 25.085 295 167 8 96 345 107 392 1.39e-16 81.3
MS.gene042467.t1 AT1G62020 25.571 219 123 6 154 342 22 230 3.90e-16 80.1
MS.gene042467.t1 AT1G62020 22.917 288 184 11 61 340 15 272 1.45e-13 72.4
MS.gene042467.t1 AT1G62020 23.529 255 169 8 54 306 50 280 2.32e-12 68.6
MS.gene042467.t1 AT4G29830 24.444 315 204 7 53 342 12 317 5.56e-16 78.2
MS.gene042467.t1 AT4G29830 25.123 203 138 3 48 236 95 297 5.94e-12 66.2
MS.gene042467.t1 AT5G16750 23.776 286 190 7 51 319 354 628 8.35e-16 79.0
MS.gene042467.t1 AT5G16750 25.000 272 178 11 50 305 396 657 3.79e-15 77.0
MS.gene042467.t1 AT5G16750 23.693 287 191 9 76 342 331 609 2.64e-11 65.5
MS.gene042467.t1 AT5G13840 23.982 221 162 3 48 264 250 468 1.46e-15 77.8
MS.gene042467.t1 AT5G13840 23.982 221 162 3 48 264 250 468 1.46e-15 77.8
MS.gene042467.t1 AT5G56130 21.993 291 212 7 53 339 18 297 1.74e-15 76.6
MS.gene042467.t1 AT5G56130 23.529 255 182 5 95 345 17 262 6.26e-12 66.2
MS.gene042467.t1 AT4G34460 29.680 219 136 8 50 251 151 368 1.90e-15 77.0
MS.gene042467.t1 AT4G34460 28.030 264 165 9 58 301 110 368 2.89e-15 76.6
MS.gene042467.t1 AT4G34460 29.680 219 136 8 50 251 146 363 2.18e-15 77.0
MS.gene042467.t1 AT4G34460 28.030 264 165 9 58 301 105 363 3.14e-15 76.3
MS.gene042467.t1 AT4G34460 28.030 264 165 9 58 301 48 306 2.81e-15 75.9
MS.gene042467.t1 AT3G21540 36.220 127 75 3 51 175 102 224 4.02e-15 77.0
MS.gene042467.t1 AT3G18140 24.286 280 191 8 56 325 36 304 5.15e-15 75.1
MS.gene042467.t1 AT3G18140 23.636 275 152 7 113 337 8 274 6.11e-15 74.7
MS.gene042467.t1 AT3G18140 23.605 233 162 6 47 270 70 295 1.53e-12 67.8
MS.gene042467.t1 AT4G32551 22.776 281 206 7 63 342 697 967 1.20e-14 75.5
MS.gene042467.t1 AT4G32551 22.776 281 206 7 63 342 659 929 1.35e-14 75.5
MS.gene042467.t1 AT2G47410 25.352 213 131 4 48 233 47 258 3.81e-14 74.3
MS.gene042467.t1 AT2G47410 25.352 213 131 4 48 233 229 440 4.08e-14 74.3
MS.gene042467.t1 AT2G47410 25.352 213 131 4 48 233 228 439 4.12e-14 74.3
MS.gene042467.t1 AT1G53090 26.887 212 145 5 51 253 259 469 4.49e-14 73.6
MS.gene042467.t1 AT1G53090 26.887 212 145 5 51 253 480 690 5.02e-14 73.6
MS.gene042467.t1 AT1G53090 26.887 212 145 5 51 253 480 690 5.02e-14 73.6
MS.gene042467.t1 AT1G53090 26.887 212 145 5 51 253 480 690 5.02e-14 73.6
MS.gene042467.t1 AT4G22910 24.402 209 152 3 51 255 255 461 9.09e-14 72.4
MS.gene042467.t1 AT2G21390 23.024 291 186 11 58 340 12 272 1.87e-13 72.0
MS.gene042467.t1 AT2G21390 23.715 253 171 7 54 306 50 280 3.28e-13 71.2
MS.gene042467.t1 AT1G73720 32.283 127 82 3 54 179 262 385 3.60e-13 70.9
MS.gene042467.t1 AT1G73720 26.786 168 113 4 96 254 211 377 1.52e-12 68.9
MS.gene042467.t1 AT1G73720 25.980 204 127 7 155 342 227 422 4.23e-11 64.3
MS.gene042467.t1 AT1G79990 30.120 166 111 4 48 209 92 256 3.88e-13 70.9
MS.gene042467.t1 AT1G79990 30.120 166 111 4 48 209 92 256 4.20e-13 70.9
MS.gene042467.t1 AT2G22040 24.126 286 192 10 70 342 13 286 4.37e-13 69.7
MS.gene042467.t1 AT2G22040 24.312 218 152 6 47 254 76 290 3.33e-11 63.9
MS.gene042467.t1 AT4G11110 24.265 272 176 8 55 301 711 977 5.46e-13 70.5
MS.gene042467.t1 AT2G32700 22.545 275 158 8 56 329 511 731 5.47e-13 70.5
MS.gene042467.t1 AT2G32700 22.545 275 158 8 56 329 511 731 5.47e-13 70.5
MS.gene042467.t1 AT2G32700 22.545 275 158 8 56 329 511 731 5.47e-13 70.5
MS.gene042467.t1 AT2G32700 22.545 275 158 8 56 329 511 731 5.47e-13 70.5
MS.gene042467.t1 AT2G32700 22.545 275 158 8 56 329 511 731 5.47e-13 70.5
MS.gene042467.t1 AT2G32700 22.545 275 158 8 56 329 509 729 5.82e-13 70.5
MS.gene042467.t1 AT2G32700 22.545 275 158 8 56 329 530 750 6.09e-13 70.5
MS.gene042467.t1 AT3G05090 24.382 283 200 7 68 345 53 326 6.49e-13 70.1
MS.gene042467.t1 AT3G05090 24.382 283 200 7 68 345 53 326 6.49e-13 70.1
MS.gene042467.t1 AT3G05090 24.382 283 200 7 68 345 53 326 6.49e-13 70.1
MS.gene042467.t1 AT2G47410 24.215 223 131 4 48 233 47 268 6.53e-13 70.5
MS.gene042467.t1 AT2G47410 24.215 223 131 4 48 233 47 268 6.53e-13 70.5
MS.gene042467.t1 AT2G47410 24.215 223 131 4 48 233 229 450 6.99e-13 70.5
MS.gene042467.t1 AT4G34380 24.255 235 154 7 97 311 234 464 7.87e-13 69.7
MS.gene042467.t1 AT2G32950 26.368 201 136 7 104 301 313 504 9.02e-13 69.7
MS.gene042467.t1 AT2G34260 21.107 289 215 6 58 342 9 288 1.12e-12 68.6
MS.gene042467.t1 AT2G32950 26.368 201 136 7 104 301 426 617 1.21e-12 69.3
MS.gene042467.t1 AT1G15470 23.667 300 167 9 92 342 5 291 1.51e-12 68.2
MS.gene042467.t1 AT2G33340 25.000 260 174 9 51 301 260 507 1.81e-12 68.6
MS.gene042467.t1 AT2G33340 25.397 189 127 6 155 337 236 416 4.59e-11 64.3
MS.gene042467.t1 AT2G33340 25.000 260 174 9 51 301 260 507 1.81e-12 68.6
MS.gene042467.t1 AT2G33340 25.397 189 127 6 155 337 236 416 4.59e-11 64.3
MS.gene042467.t1 AT3G15354 26.415 265 165 9 51 301 530 778 2.07e-12 68.9
MS.gene042467.t1 AT4G34460 21.622 296 206 11 28 303 35 324 7.23e-12 66.2
MS.gene042467.t1 AT2G46290 29.299 157 93 3 106 245 183 338 9.37e-12 65.9
MS.gene042467.t1 AT4G11920 24.528 212 154 3 48 255 244 453 9.45e-12 66.2
MS.gene042467.t1 AT5G64630 26.471 204 117 5 51 240 60 244 9.61e-12 66.2
MS.gene042467.t1 AT5G64630 26.857 175 116 4 174 338 4 176 9.31e-11 63.2
MS.gene042467.t1 AT3G15980 28.313 166 114 4 48 209 92 256 1.03e-11 66.6
MS.gene042467.t1 AT3G15980 25.481 208 148 5 58 260 60 265 4.18e-11 64.7
MS.gene042467.t1 AT3G15980 28.313 166 114 4 48 209 92 256 1.05e-11 66.6
MS.gene042467.t1 AT3G15980 25.481 208 148 5 58 260 60 265 4.09e-11 64.7
MS.gene042467.t1 AT3G15980 28.313 166 114 4 48 209 92 256 1.06e-11 66.6
MS.gene042467.t1 AT3G15980 25.481 208 148 5 58 260 60 265 4.06e-11 64.7
MS.gene042467.t1 AT3G15980 28.313 166 114 4 48 209 92 256 1.10e-11 66.6
MS.gene042467.t1 AT3G15980 25.481 208 148 5 58 260 60 265 4.66e-11 64.7
MS.gene042467.t1 AT3G15980 28.313 166 114 4 48 209 92 256 1.10e-11 66.6
MS.gene042467.t1 AT3G15980 25.481 208 148 5 58 260 60 265 4.66e-11 64.7
MS.gene042467.t1 AT3G15980 28.313 166 114 4 48 209 92 256 1.10e-11 66.6
MS.gene042467.t1 AT3G15980 25.481 208 148 5 58 260 60 265 4.66e-11 64.7
MS.gene042467.t1 AT3G15980 28.313 166 114 4 48 209 92 256 1.10e-11 66.6
MS.gene042467.t1 AT3G15980 25.481 208 148 5 58 260 60 265 4.66e-11 64.7
MS.gene042467.t1 AT1G52360 28.313 166 114 4 48 209 136 300 1.18e-11 66.6
MS.gene042467.t1 AT1G15470 27.600 250 159 8 92 332 5 241 1.26e-11 64.7
MS.gene042467.t1 AT1G52360 28.313 166 114 4 48 209 92 256 1.30e-11 66.2
MS.gene042467.t1 AT1G52360 28.313 166 114 4 48 209 92 256 1.30e-11 66.2
MS.gene042467.t1 AT5G64630 26.471 204 117 5 51 240 60 244 1.40e-11 65.9
MS.gene042467.t1 AT1G52360 28.313 166 114 4 48 209 92 256 1.47e-11 66.2
MS.gene042467.t1 AT3G42660 24.291 247 141 6 58 303 107 308 1.61e-11 66.2
MS.gene042467.t1 AT1G29260 27.083 144 101 4 113 252 122 265 2.06e-11 64.7
MS.gene042467.t1 AT1G29260 26.244 221 141 11 136 342 51 263 6.83e-11 63.2
MS.gene042467.t1 AT3G21060 22.093 344 202 11 58 342 26 362 2.08e-11 65.5
MS.gene042467.t1 AT2G33340 26.087 207 136 7 51 248 260 458 2.25e-11 65.1
MS.gene042467.t1 AT2G33340 25.397 189 127 6 155 337 236 416 3.62e-11 64.7
MS.gene042467.t1 AT2G26490 27.072 181 118 6 97 269 205 379 2.67e-11 65.1
MS.gene042467.t1 AT3G15610 25.743 303 200 13 49 342 10 296 3.63e-11 63.9
MS.gene042467.t1 AT5G49430 31.746 126 83 2 48 171 238 362 3.97e-11 65.1
MS.gene042467.t1 AT5G49430 31.746 126 83 2 48 171 238 362 3.97e-11 65.1
MS.gene042467.t1 AT3G44530 24.710 259 128 9 58 315 16 208 6.17e-11 64.3
MS.gene042467.t1 AT2G05720 26.984 189 100 6 147 328 69 226 6.20e-11 62.8
MS.gene042467.t1 AT1G04510 24.468 188 131 6 155 337 236 417 6.93e-11 63.9
MS.gene042467.t1 AT1G04510 24.468 188 131 6 155 337 236 417 6.99e-11 63.9
MS.gene042467.t1 AT3G44530 24.710 259 128 9 58 315 16 208 7.38e-11 63.9
MS.gene042467.t1 AT1G49450 27.895 190 123 7 89 270 237 420 9.21e-11 63.2

Find 94 sgRNAs with CRISPR-Local

Find 109 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AAATCGATGTGTGAAGATTT+TGG 0.210538 7.2:-21629462 MS.gene042467:CDS
ATGATGGAACAGCAAAATTA+TGG 0.214770 7.2:-21629757 MS.gene042467:CDS
TGGGGATTGCAAGAACTTTA+TGG 0.220748 7.2:-21629984 MS.gene042467:CDS
TACAATGCTCCTCGTGCTCC+TGG 0.260112 7.2:-21630160 MS.gene042467:CDS
CTGATAAAACACTTAGGTTA+TGG 0.310856 7.2:-21629886 MS.gene042467:CDS
AAGAACTTTATGGTTCTAAA+AGG 0.322543 7.2:-21629974 MS.gene042467:CDS
TTGATAATGATGTCAAGATA+TGG 0.329411 7.2:-21629634 MS.gene042467:CDS
GGTATTTATCAGGAAATGTT+TGG 0.338593 7.2:+21629711 None:intergenic
TGGATTGCAAGCTTTGCATT+TGG 0.355336 7.2:-21629508 MS.gene042467:CDS
CATCCCAATGAACCTATTGT+TGG 0.366502 7.2:-21629266 MS.gene042467:CDS
CTGATCGAATGGTTTACATC+TGG 0.370909 7.2:-21629358 MS.gene042467:CDS
GAGGTCCGCTGCTTTCCATT+TGG 0.370946 7.2:+21630136 None:intergenic
TCCTGTTGGATTGAACTTCA+TGG 0.372012 7.2:+21630060 None:intergenic
TCAACAGTTGCTGTCCTTCC+CGG 0.373390 7.2:-21629811 MS.gene042467:CDS
GCAGTAATCTGGTATTTATC+AGG 0.374593 7.2:+21629701 None:intergenic
GGATTGCAAGCTTTGCATTT+GGG 0.377088 7.2:-21629507 MS.gene042467:CDS
TGATCCAACAATAGGTTCAT+TGG 0.384589 7.2:+21629262 None:intergenic
CGCTGCTTTCCATTTGGCCC+AGG 0.389260 7.2:+21630142 None:intergenic
AAAGCAGCGGACCTCAAGTT+TGG 0.390848 7.2:-21630128 MS.gene042467:CDS
AGTGACAAGCAGATTTATCT+TGG 0.392857 7.2:-21629233 MS.gene042467:CDS
TGATAAAACACTTAGGTTAT+GGG 0.394014 7.2:-21629885 MS.gene042467:CDS
ACAGGATCAGTCGTTGCATC+TGG 0.404975 7.2:-21630043 MS.gene042467:CDS
CCTCGTGCTCCTGGGCCAAA+TGG 0.434379 7.2:-21630151 MS.gene042467:CDS
CTGCTACATGATCCAACAAT+AGG 0.437498 7.2:+21629254 None:intergenic
AGAAGCTGACAGCAGTAATC+TGG 0.437617 7.2:+21629690 None:intergenic
GTGACAAGCAGATTTATCTT+GGG 0.440302 7.2:-21629232 MS.gene042467:CDS
ACCATGAAGTTCAATCCAAC+AGG 0.451176 7.2:-21630061 MS.gene042467:CDS
GATCCAACAATAGGTTCATT+GGG 0.458166 7.2:+21629263 None:intergenic
GTTGTCAGTGGCTCTGATGA+TGG 0.458547 7.2:-21629773 MS.gene042467:CDS
TGATGGAACAGCAAAATTAT+GGG 0.459959 7.2:-21629756 MS.gene042467:CDS
GCTGTAACCTTGCTTCCATC+AGG 0.459979 7.2:+21629389 None:intergenic
TGATCGAATGGTTTACATCT+GGG 0.474757 7.2:-21629357 MS.gene042467:CDS
GTTGCTGTCCTTCCCGGAGG+GGG 0.480310 7.2:-21629805 MS.gene042467:CDS
GAACATGCTCTGTCAGTTGT+TGG 0.481272 7.2:-21630214 MS.gene042467:CDS
TGATAATGATGTCAAGATAT+GGG 0.481545 7.2:-21629633 MS.gene042467:CDS
TGACCGGTCAGCAACATGAT+TGG 0.490379 7.2:+21630100 None:intergenic
AGGTTATGGGATACAGAAAC+AGG 0.491394 7.2:-21629872 MS.gene042467:CDS
GATGGAAGCAAGGTTACAGC+TGG 0.492182 7.2:-21629386 MS.gene042467:CDS
GATCTTCACTGGACTTCAGA+TGG 0.494128 7.2:-21629932 MS.gene042467:CDS
ATTATGGGATATGCGTCAAA+GGG 0.495104 7.2:-21629741 MS.gene042467:CDS
ATACAATATTCTTCGAGAAG+TGG 0.496146 7.2:+21629331 None:intergenic
GTGAGAAGGTAGGAGCCATC+AGG 0.504631 7.2:+21629539 None:intergenic
CAGTTGCTGTCCTTCCCGGA+GGG 0.504648 7.2:-21629807 MS.gene042467:CDS
AGCTGGGAGTTCTGATCGAA+TGG 0.504723 7.2:-21629369 MS.gene042467:CDS
GAGGTCACCATGACACTTCA+AGG 0.510366 7.2:-21629596 MS.gene042467:CDS
CAACAATAGGTTCATTGGGA+TGG 0.512229 7.2:+21629267 None:intergenic
GGAGCACGAGGAGCATTGTA+TGG 0.514520 7.2:+21630163 None:intergenic
AATTATGGGATATGCGTCAA+AGG 0.514841 7.2:-21629742 MS.gene042467:CDS
AAGATATGGGATTTGCGTAA+AGG 0.526390 7.2:-21629620 MS.gene042467:CDS
GGGCCACCTCTTGTTGTCAG+TGG 0.528777 7.2:-21629785 MS.gene042467:CDS
AGTTGTTGGTTCAAAGCCAA+TGG 0.529017 7.2:-21630200 MS.gene042467:CDS
AGAATATTGTATAAGCTACC+TGG 0.531788 7.2:-21629320 MS.gene042467:CDS
TTTATCAGGAAATGTTTGGA+TGG 0.545878 7.2:+21629715 None:intergenic
AATCCATGCCATTGGTGAGA+AGG 0.550055 7.2:+21629525 None:intergenic
TTCACCAGGAAAACCTTGCA+TGG 0.551743 7.2:+21630240 None:intergenic
AGAATTTGTTGAAATGTGGC+TGG 0.551762 7.2:-21629415 MS.gene042467:CDS
GGCTCCTACCTTCTCACCAA+TGG 0.554649 7.2:-21629533 MS.gene042467:CDS
ACAATGCTCCTCGTGCTCCT+GGG 0.555966 7.2:-21630159 MS.gene042467:CDS
GGCACAGTAGACCATTCCAT+TGG 0.559084 7.2:+21630184 None:intergenic
TCTCCAATCATGTTGCTGAC+CGG 0.559881 7.2:-21630103 MS.gene042467:CDS
ATATACAGCACTCTGGTGAC+CGG 0.570974 7.2:+21630084 None:intergenic
CCATTTGGCCCAGGAGCACG+AGG 0.572146 7.2:+21630151 None:intergenic
CTACCTTCTCACCAATGGCA+TGG 0.574146 7.2:-21629528 MS.gene042467:CDS
TTTCCTTTGGAATGTGCATG+GGG 0.575575 7.2:-21630002 MS.gene042467:CDS
ATCTTCACTGGACTTCAGAT+GGG 0.576718 7.2:-21629931 MS.gene042467:CDS
GATTGGAGATTCCAAACTTG+AGG 0.579358 7.2:+21630117 None:intergenic
AGTTGCTGTCCTTCCCGGAG+GGG 0.581679 7.2:-21629806 MS.gene042467:CDS
GAGAAGAATTTGTTGAAATG+TGG 0.585649 7.2:-21629419 MS.gene042467:CDS
TGACAAGCAGATTTATCTTG+GGG 0.590927 7.2:-21629231 MS.gene042467:CDS
CCAGCCCTGATAAAACACTT+AGG 0.594684 7.2:-21629892 MS.gene042467:CDS
CATGCCATTGGTGAGAAGGT+AGG 0.595983 7.2:+21629529 None:intergenic
TTGGTTCAAAGCCAATGGAA+TGG 0.596893 7.2:-21630195 MS.gene042467:CDS
AAGCTTGCAATCCATGCCAT+TGG 0.602648 7.2:+21629517 None:intergenic
GATGCAACGACTGATCCTGT+TGG 0.603708 7.2:+21630046 None:intergenic
AAATGTGGCTGGTCACCTGA+TGG 0.605504 7.2:-21629404 MS.gene042467:CDS
AGTATGCAATTGAGTCCTGA+TGG 0.607796 7.2:-21629554 MS.gene042467:CDS
CTGGTCACCTGATGGAAGCA+AGG 0.609923 7.2:-21629396 MS.gene042467:CDS
TTAACAGATCCATTGTGCCC+AGG 0.610020 7.2:+21629302 None:intergenic
TCATGGTATATACAGCACTC+TGG 0.613882 7.2:+21630077 None:intergenic
GTAGCAAAGGTCACCATGCA+AGG 0.614816 7.2:-21630253 None:intergenic
TCAGAGCCACTGACAACAAG+AGG 0.616051 7.2:+21629779 None:intergenic
GAATATTGTATAAGCTACCT+GGG 0.618052 7.2:-21629319 MS.gene042467:CDS
AATCCCCATGCACATTCCAA+AGG 0.619475 7.2:+21629999 None:intergenic
ACAGTTGCTGTCCTTCCCGG+AGG 0.624368 7.2:-21629808 MS.gene042467:CDS
TATAAGCTACCTGGGCACAA+TGG 0.631539 7.2:-21629311 MS.gene042467:CDS
CTGGGCCAAATGGAAAGCAG+CGG 0.631637 7.2:-21630141 MS.gene042467:CDS
ATGGGATTTGCGTAAAGGTG+AGG 0.633353 7.2:-21629615 MS.gene042467:CDS
GCCTCAGATAAGATCTACAC+TGG 0.646201 7.2:-21629662 MS.gene042467:CDS
ATGGAAGCAAGGTTACAGCT+GGG 0.648545 7.2:-21629385 MS.gene042467:CDS
TTGATGACCTTGAAGTGTCA+TGG 0.649986 7.2:+21629589 None:intergenic
GAGCCACTGACAACAAGAGG+TGG 0.665793 7.2:+21629782 None:intergenic
ACCAGTGTAGATCTTATCTG+AGG 0.669830 7.2:+21629661 None:intergenic
TCAGATAAGATCTACACTGG+TGG 0.683289 7.2:-21629659 MS.gene042467:CDS
TTATGGGATATGCGTCAAAG+GGG 0.713777 7.2:-21629740 MS.gene042467:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
! AGGAAAACAAATCAAAAAGA+TGG - chr7.2:21629609-21629628 MS.gene042467:CDS 25.0%
! TGATAAAACACTTAGGTTAT+GGG - chr7.2:21629576-21629595 MS.gene042467:CDS 25.0%
!! ATAACCTAAGTGTTTTATCA+GGG + chr7.2:21629576-21629595 None:intergenic 25.0%
!! ATGACAAAGAAATTTTCCTT+TGG - chr7.2:21629446-21629465 MS.gene042467:CDS 25.0%
!! TGATAATGATGTCAAGATAT+GGG - chr7.2:21629828-21629847 MS.gene042467:CDS 25.0%
!!! AAGAACTTTATGGTTCTAAA+AGG - chr7.2:21629487-21629506 MS.gene042467:CDS 25.0%
!!! TTGATAATGATGTCAAGATA+TGG - chr7.2:21629827-21629846 MS.gene042467:CDS 25.0%
AGAATATTGTATAAGCTACC+TGG - chr7.2:21630141-21630160 MS.gene042467:CDS 30.0%
ATACAATATTCTTCGAGAAG+TGG + chr7.2:21630133-21630152 None:intergenic 30.0%
CTGATAAAACACTTAGGTTA+TGG - chr7.2:21629575-21629594 MS.gene042467:CDS 30.0%
GAATATTGTATAAGCTACCT+GGG - chr7.2:21630142-21630161 MS.gene042467:CDS 30.0%
GGTATTTATCAGGAAATGTT+TGG + chr7.2:21629753-21629772 None:intergenic 30.0%
TGATGGAACAGCAAAATTAT+GGG - chr7.2:21629705-21629724 MS.gene042467:CDS 30.0%
TTTATCAGGAAATGTTTGGA+TGG + chr7.2:21629749-21629768 None:intergenic 30.0%
! AAATCGATGTGTGAAGATTT+TGG - chr7.2:21629999-21630018 MS.gene042467:CDS 30.0%
! ATGATGGAACAGCAAAATTA+TGG - chr7.2:21629704-21629723 MS.gene042467:CDS 30.0%
! CATAACCTAAGTGTTTTATC+AGG + chr7.2:21629577-21629596 None:intergenic 30.0%
!! GAGAAGAATTTGTTGAAATG+TGG - chr7.2:21630042-21630061 MS.gene042467:CDS 30.0%
AAGATATGGGATTTGCGTAA+AGG - chr7.2:21629841-21629860 MS.gene042467:CDS 35.0%
AATTATGGGATATGCGTCAA+AGG - chr7.2:21629719-21629738 MS.gene042467:CDS 35.0%
AGTGACAAGCAGATTTATCT+TGG - chr7.2:21630228-21630247 MS.gene042467:CDS 35.0%
ATTATGGGATATGCGTCAAA+GGG - chr7.2:21629720-21629739 MS.gene042467:CDS 35.0%
GATCCAACAATAGGTTCATT+GGG + chr7.2:21630201-21630220 None:intergenic 35.0%
GCAGTAATCTGGTATTTATC+AGG + chr7.2:21629763-21629782 None:intergenic 35.0%
GTGACAAGCAGATTTATCTT+GGG - chr7.2:21630229-21630248 MS.gene042467:CDS 35.0%
TGACAAGCAGATTTATCTTG+GGG - chr7.2:21630230-21630249 MS.gene042467:CDS 35.0%
TGATCCAACAATAGGTTCAT+TGG + chr7.2:21630202-21630221 None:intergenic 35.0%
TGATCGAATGGTTTACATCT+GGG - chr7.2:21630104-21630123 MS.gene042467:CDS 35.0%
!! AGAATTTGTTGAAATGTGGC+TGG - chr7.2:21630046-21630065 MS.gene042467:CDS 35.0%
!! ATCGATTTTGTGGAGCATAT+GGG + chr7.2:21629987-21630006 None:intergenic 35.0%
!! GATGTGTGAAGATTTTGGAA+GGG - chr7.2:21630004-21630023 MS.gene042467:CDS 35.0%
!!! ATCTTCACACATCGATTTTG+TGG + chr7.2:21629997-21630016 None:intergenic 35.0%
!!! ATGCTGTTTTAGATCTTCAC+TGG - chr7.2:21629518-21629537 MS.gene042467:CDS 35.0%
!!! ATTTTCCTTTGGAATGTGCA+TGG - chr7.2:21629457-21629476 MS.gene042467:CDS 35.0%
!!! TTTTCCTTTGGAATGTGCAT+GGG - chr7.2:21629458-21629477 MS.gene042467:CDS 35.0%
ACCAGTGTAGATCTTATCTG+AGG + chr7.2:21629803-21629822 None:intergenic 40.0%
ACCATGAAGTTCAATCCAAC+AGG - chr7.2:21629400-21629419 MS.gene042467:CDS 40.0%
AGGTTATGGGATACAGAAAC+AGG - chr7.2:21629589-21629608 MS.gene042467:CDS 40.0%
AGTATGCAATTGAGTCCTGA+TGG - chr7.2:21629907-21629926 MS.gene042467:CDS 40.0%
ATCTTCACTGGACTTCAGAT+GGG - chr7.2:21629530-21629549 MS.gene042467:CDS 40.0%
CAACAATAGGTTCATTGGGA+TGG + chr7.2:21630197-21630216 None:intergenic 40.0%
CATCCCAATGAACCTATTGT+TGG - chr7.2:21630195-21630214 MS.gene042467:CDS 40.0%
CTGATCGAATGGTTTACATC+TGG - chr7.2:21630103-21630122 MS.gene042467:CDS 40.0%
CTGCTACATGATCCAACAAT+AGG + chr7.2:21630210-21630229 None:intergenic 40.0%
GATTGGAGATTCCAAACTTG+AGG + chr7.2:21629347-21629366 None:intergenic 40.0%
GGATTGCAAGCTTTGCATTT+GGG - chr7.2:21629954-21629973 MS.gene042467:CDS 40.0%
TCAGATAAGATCTACACTGG+TGG - chr7.2:21629802-21629821 MS.gene042467:CDS 40.0%
TCATGGTATATACAGCACTC+TGG + chr7.2:21629387-21629406 None:intergenic 40.0%
TCCTGTTGGATTGAACTTCA+TGG + chr7.2:21629404-21629423 None:intergenic 40.0%
TGGATTGCAAGCTTTGCATT+TGG - chr7.2:21629953-21629972 MS.gene042467:CDS 40.0%
TGGGGATTGCAAGAACTTTA+TGG - chr7.2:21629477-21629496 MS.gene042467:CDS 40.0%
TTATGGGATATGCGTCAAAG+GGG - chr7.2:21629721-21629740 MS.gene042467:CDS 40.0%
TTGGTTCAAAGCCAATGGAA+TGG - chr7.2:21629266-21629285 MS.gene042467:CDS 40.0%
! AGAGCATGTTCATTTTCACC+AGG + chr7.2:21629238-21629257 None:intergenic 40.0%
! CGATGTGTGAAGATTTTGGA+AGG - chr7.2:21630003-21630022 MS.gene042467:CDS 40.0%
! TTGATGACCTTGAAGTGTCA+TGG + chr7.2:21629875-21629894 None:intergenic 40.0%
!! AGTTGTTGGTTCAAAGCCAA+TGG - chr7.2:21629261-21629280 MS.gene042467:CDS 40.0%
!! TTTCCTTTGGAATGTGCATG+GGG - chr7.2:21629459-21629478 MS.gene042467:CDS 40.0%
!!! CATCGATTTTGTGGAGCATA+TGG + chr7.2:21629988-21630007 None:intergenic 40.0%
AAGCTTGCAATCCATGCCAT+TGG + chr7.2:21629947-21629966 None:intergenic 45.0%
AATCCATGCCATTGGTGAGA+AGG + chr7.2:21629939-21629958 None:intergenic 45.0%
AATCCCCATGCACATTCCAA+AGG + chr7.2:21629465-21629484 None:intergenic 45.0%
AGAAGCTGACAGCAGTAATC+TGG + chr7.2:21629774-21629793 None:intergenic 45.0%
ATATACAGCACTCTGGTGAC+CGG + chr7.2:21629380-21629399 None:intergenic 45.0%
ATGGAAGCAAGGTTACAGCT+GGG - chr7.2:21630076-21630095 MS.gene042467:CDS 45.0%
ATGGGATTTGCGTAAAGGTG+AGG - chr7.2:21629846-21629865 MS.gene042467:CDS 45.0%
CCAGCCCTGATAAAACACTT+AGG - chr7.2:21629569-21629588 MS.gene042467:CDS 45.0%
GAACATGCTCTGTCAGTTGT+TGG - chr7.2:21629247-21629266 MS.gene042467:CDS 45.0%
GATCTTCACTGGACTTCAGA+TGG - chr7.2:21629529-21629548 MS.gene042467:CDS 45.0%
GCCTCAGATAAGATCTACAC+TGG - chr7.2:21629799-21629818 MS.gene042467:CDS 45.0%
TATAAGCTACCTGGGCACAA+TGG - chr7.2:21630150-21630169 MS.gene042467:CDS 45.0%
TCTCCAATCATGTTGCTGAC+CGG - chr7.2:21629358-21629377 MS.gene042467:CDS 45.0%
TTAACAGATCCATTGTGCCC+AGG + chr7.2:21630162-21630181 None:intergenic 45.0%
! CCTAAGTGTTTTATCAGGGC+TGG + chr7.2:21629572-21629591 None:intergenic 45.0%
AAAGCAGCGGACCTCAAGTT+TGG - chr7.2:21629333-21629352 MS.gene042467:CDS 50.0%
ACAGGATCAGTCGTTGCATC+TGG - chr7.2:21629418-21629437 MS.gene042467:CDS 50.0%
CATGCCATTGGTGAGAAGGT+AGG + chr7.2:21629935-21629954 None:intergenic 50.0%
CTACCTTCTCACCAATGGCA+TGG - chr7.2:21629933-21629952 MS.gene042467:CDS 50.0%
GAGGTCACCATGACACTTCA+AGG - chr7.2:21629865-21629884 MS.gene042467:CDS 50.0%
GATGCAACGACTGATCCTGT+TGG + chr7.2:21629418-21629437 None:intergenic 50.0%
GATGGAAGCAAGGTTACAGC+TGG - chr7.2:21630075-21630094 MS.gene042467:CDS 50.0%
GCTGTAACCTTGCTTCCATC+AGG + chr7.2:21630075-21630094 None:intergenic 50.0%
GGCACAGTAGACCATTCCAT+TGG + chr7.2:21629280-21629299 None:intergenic 50.0%
TCAACAGTTGCTGTCCTTCC+CGG - chr7.2:21629650-21629669 MS.gene042467:CDS 50.0%
TCAGAGCCACTGACAACAAG+AGG + chr7.2:21629685-21629704 None:intergenic 50.0%
TGACCGGTCAGCAACATGAT+TGG + chr7.2:21629364-21629383 None:intergenic 50.0%
! AAATGTGGCTGGTCACCTGA+TGG - chr7.2:21630057-21630076 MS.gene042467:CDS 50.0%
! AGCTGGGAGTTCTGATCGAA+TGG - chr7.2:21630092-21630111 MS.gene042467:CDS 50.0%
!! GTTGTCAGTGGCTCTGATGA+TGG - chr7.2:21629688-21629707 MS.gene042467:CDS 50.0%
ACAATGCTCCTCGTGCTCCT+GGG - chr7.2:21629302-21629321 MS.gene042467:CDS 55.0%
CTGGGCCAAATGGAAAGCAG+CGG - chr7.2:21629320-21629339 MS.gene042467:CDS 55.0%
CTGGTCACCTGATGGAAGCA+AGG - chr7.2:21630065-21630084 MS.gene042467:CDS 55.0%
GAGCCACTGACAACAAGAGG+TGG + chr7.2:21629682-21629701 None:intergenic 55.0%
GGCTCCTACCTTCTCACCAA+TGG - chr7.2:21629928-21629947 MS.gene042467:CDS 55.0%
GTGAGAAGGTAGGAGCCATC+AGG + chr7.2:21629925-21629944 None:intergenic 55.0%
TACAATGCTCCTCGTGCTCC+TGG - chr7.2:21629301-21629320 MS.gene042467:CDS 55.0%
! GAGGTCCGCTGCTTTCCATT+TGG + chr7.2:21629328-21629347 None:intergenic 55.0%
!! GGAGCACGAGGAGCATTGTA+TGG + chr7.2:21629301-21629320 None:intergenic 55.0%
ACAGTTGCTGTCCTTCCCGG+AGG - chr7.2:21629653-21629672 MS.gene042467:CDS 60.0%
AGTTGCTGTCCTTCCCGGAG+GGG - chr7.2:21629655-21629674 MS.gene042467:CDS 60.0%
CAGTTGCTGTCCTTCCCGGA+GGG - chr7.2:21629654-21629673 MS.gene042467:CDS 60.0%
! CGCTGCTTTCCATTTGGCCC+AGG + chr7.2:21629322-21629341 None:intergenic 60.0%
! GGGCCACCTCTTGTTGTCAG+TGG - chr7.2:21629676-21629695 MS.gene042467:CDS 60.0%
AACAAGAGGTGGCCCCCTCC+GGG + chr7.2:21629671-21629690 None:intergenic 65.0%
CAACAAGAGGTGGCCCCCTC+CGG + chr7.2:21629672-21629691 None:intergenic 65.0%
CCTCGTGCTCCTGGGCCAAA+TGG - chr7.2:21629310-21629329 MS.gene042467:CDS 65.0%
GTTGCTGTCCTTCCCGGAGG+GGG - chr7.2:21629656-21629675 MS.gene042467:CDS 65.0%
! CCATTTGGCCCAGGAGCACG+AGG + chr7.2:21629313-21629332 None:intergenic 65.0%
AGAGGTGGCCCCCTCCGGGA+AGG + chr7.2:21629667-21629686 None:intergenic 75.0%


Chromosome Type Strat End Strand Name
chr7.2 gene 21629223 21630260 21629223 ID=MS.gene042467
chr7.2 mRNA 21629223 21630260 21629223 ID=MS.gene042467.t1;Parent=MS.gene042467
chr7.2 exon 21629223 21630260 21629223 ID=MS.gene042467.t1.exon1;Parent=MS.gene042467.t1
chr7.2 CDS 21629223 21630260 21629223 ID=cds.MS.gene042467.t1;Parent=MS.gene042467.t1
Gene Sequence

>MS.gene042467

ATGCAAGGTTTTCCTGGTGAAAATGAACATGCTCTGTCAGTTGTTGGTTCAAAGCCAATGGAATGGTCTACTGTGCCATACAATGCTCCTCGTGCTCCTGGGCCAAATGGAAAGCAGCGGACCTCAAGTTTGGAATCTCCAATCATGTTGCTGACCGGTCACCAGAGTGCTGTATATACCATGAAGTTCAATCCAACAGGATCAGTCGTTGCATCTGGATCGCATGACAAAGAAATTTTCCTTTGGAATGTGCATGGGGATTGCAAGAACTTTATGGTTCTAAAAGGTCACAAGAATGCTGTTTTAGATCTTCACTGGACTTCAGATGGGACACAGATTATCTCTGCCAGCCCTGATAAAACACTTAGGTTATGGGATACAGAAACAGGAAAACAAATCAAAAAGATGGTAGAGCATCTCTCGTATGTCAACAGTTGCTGTCCTTCCCGGAGGGGGCCACCTCTTGTTGTCAGTGGCTCTGATGATGGAACAGCAAAATTATGGGATATGCGTCAAAGGGGCTCCATCCAAACATTTCCTGATAAATACCAGATTACTGCTGTCAGCTTCTCTGATGCCTCAGATAAGATCTACACTGGTGGTATTGATAATGATGTCAAGATATGGGATTTGCGTAAAGGTGAGGTCACCATGACACTTCAAGGTCATCAAGATATGATTACAAGTATGCAATTGAGTCCTGATGGCTCCTACCTTCTCACCAATGGCATGGATTGCAAGCTTTGCATTTGGGATATGCGCCCATATGCTCCACAAAATCGATGTGTGAAGATTTTGGAAGGGCATCAACACAACTTTGAGAAGAATTTGTTGAAATGTGGCTGGTCACCTGATGGAAGCAAGGTTACAGCTGGGAGTTCTGATCGAATGGTTTACATCTGGGATACCACTTCTCGAAGAATATTGTATAAGCTACCTGGGCACAATGGATCTGTTAATGAGTGTGTTTTCCATCCCAATGAACCTATTGTTGGATCATGTAGCAGTGACAAGCAGATTTATCTTGGGGAGATATGA

Protein sequence

>MS.gene042467.t1

MQGFPGENEHALSVVGSKPMEWSTVPYNAPRAPGPNGKQRTSSLESPIMLLTGHQSAVYTMKFNPTGSVVASGSHDKEIFLWNVHGDCKNFMVLKGHKNAVLDLHWTSDGTQIISASPDKTLRLWDTETGKQIKKMVEHLSYVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGSIQTFPDKYQITAVSFSDASDKIYTGGIDNDVKIWDLRKGEVTMTLQGHQDMITSMQLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPDGSKVTAGSSDRMVYIWDTTSRRILYKLPGHNGSVNECVFHPNEPIVGSCSSDKQIYLGEI