AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene08162


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene08162.t1 MTR_7g086360 99.420 345 2 0 1 345 1 345 0.0 719
MS.gene08162.t1 MTR_4g119620 30.693 303 190 9 51 340 23 318 2.92e-38 139
MS.gene08162.t1 MTR_4g119620 28.517 263 171 7 46 301 69 321 2.40e-24 101
MS.gene08162.t1 MTR_1g072140 31.142 289 190 7 51 337 23 304 7.58e-35 130
MS.gene08162.t1 MTR_1g072140 28.148 270 173 9 41 301 55 312 7.91e-25 102
MS.gene08162.t1 MTR_3g075400 28.364 275 190 3 51 324 221 489 9.83e-29 116
MS.gene08162.t1 MTR_4g104380 27.574 272 192 2 51 322 226 492 4.14e-28 114
MS.gene08162.t1 MTR_4g104380 27.619 210 137 6 51 251 310 513 2.44e-15 77.4
MS.gene08162.t1 MTR_8g092620 26.910 301 201 7 47 342 10 296 1.76e-27 109
MS.gene08162.t1 MTR_8g092620 23.585 212 145 5 48 251 95 297 1.31e-11 65.1
MS.gene08162.t1 MTR_8g092620 26.923 312 205 8 38 340 4 301 2.02e-27 110
MS.gene08162.t1 MTR_1g054300 28.618 304 183 11 51 342 115 396 3.08e-27 112
MS.gene08162.t1 MTR_1g054300 27.304 293 160 8 51 301 200 481 9.16e-22 96.3
MS.gene08162.t1 MTR_1g054300 22.287 341 211 7 45 342 151 480 1.44e-19 89.7
MS.gene08162.t1 MTR_4g102520 26.730 318 220 9 32 340 268 581 1.03e-26 111
MS.gene08162.t1 MTR_6g004040 26.977 215 148 4 127 340 3 209 1.33e-25 108
MS.gene08162.t1 MTR_6g004040 25.969 258 172 7 51 302 12 256 1.56e-21 96.3
MS.gene08162.t1 MTR_6g004040 28.959 221 149 5 48 267 52 265 7.10e-17 82.4
MS.gene08162.t1 MTR_3g106080 29.004 231 155 4 50 279 414 636 2.79e-24 104
MS.gene08162.t1 MTR_3g106080 28.333 240 154 5 86 320 407 633 4.12e-21 94.7
MS.gene08162.t1 MTR_3g106080 26.368 201 142 4 41 237 447 645 5.33e-16 79.3
MS.gene08162.t1 MTR_3g106080 23.902 205 144 4 142 345 423 616 9.77e-14 72.8
MS.gene08162.t1 MTR_8g467040 26.948 308 205 9 51 344 115 416 3.36e-24 102
MS.gene08162.t1 MTR_2g012630 26.636 214 148 3 130 342 5 210 1.56e-23 102
MS.gene08162.t1 MTR_2g012630 26.267 217 148 5 113 327 31 237 2.01e-17 84.0
MS.gene08162.t1 MTR_2g012630 27.184 206 142 5 51 252 54 255 1.41e-11 66.2
MS.gene08162.t1 MTR_2g012630 26.636 214 148 3 130 342 5 210 1.73e-23 102
MS.gene08162.t1 MTR_2g012630 26.267 217 148 5 113 327 31 237 2.10e-17 84.0
MS.gene08162.t1 MTR_2g012630 27.184 206 142 5 51 252 54 255 1.51e-11 66.2
MS.gene08162.t1 MTR_5g022690 30.531 226 144 6 82 305 265 479 9.06e-23 99.4
MS.gene08162.t1 MTR_5g022690 26.442 208 149 4 46 251 270 475 6.58e-18 85.1
MS.gene08162.t1 MTR_5g022690 26.506 166 112 4 164 328 261 417 1.16e-12 68.9
MS.gene08162.t1 MTR_5g016350 27.481 262 168 7 51 302 331 580 1.20e-21 96.3
MS.gene08162.t1 MTR_5g016350 27.027 333 192 11 44 342 222 537 3.28e-21 95.1
MS.gene08162.t1 MTR_5g016350 22.517 302 193 8 58 340 297 576 9.80e-18 84.7
MS.gene08162.t1 MTR_5g016350 33.714 175 105 4 47 212 410 582 2.50e-15 77.4
MS.gene08162.t1 MTR_5g016350 27.481 262 168 7 51 302 267 516 1.91e-21 95.5
MS.gene08162.t1 MTR_5g016350 27.027 333 192 11 44 342 158 473 4.12e-21 94.7
MS.gene08162.t1 MTR_5g016350 22.517 302 193 8 58 340 233 512 1.72e-17 84.0
MS.gene08162.t1 MTR_5g016350 33.714 175 105 4 47 212 346 518 3.49e-15 76.6
MS.gene08162.t1 MTR_1g097140 25.418 299 205 6 51 345 119 403 4.44e-21 93.6
MS.gene08162.t1 MTR_1g097140 25.238 210 150 4 48 254 199 404 3.27e-16 79.3
MS.gene08162.t1 MTR_5g016370 26.994 326 199 11 44 342 236 549 6.06e-21 94.4
MS.gene08162.t1 MTR_5g016370 25.573 262 173 7 51 302 343 592 2.36e-20 92.4
MS.gene08162.t1 MTR_5g016370 32.000 175 108 4 47 212 422 594 9.42e-15 75.5
MS.gene08162.t1 MTR_2g436510 24.786 351 216 12 3 341 119 433 1.88e-20 92.4
MS.gene08162.t1 MTR_2g436510 24.845 161 113 2 185 345 173 325 6.93e-13 69.7
MS.gene08162.t1 MTR_1g072740 26.506 249 174 7 52 295 290 534 1.98e-20 92.8
MS.gene08162.t1 MTR_1g069345 25.733 307 199 9 50 342 211 502 2.31e-20 92.4
MS.gene08162.t1 MTR_3g449990 23.026 304 213 11 48 342 263 554 3.47e-20 92.0
MS.gene08162.t1 MTR_4g095058 25.691 362 210 13 13 342 198 532 3.69e-20 92.0
MS.gene08162.t1 MTR_4g095058 23.954 263 176 8 51 302 326 575 3.91e-18 85.9
MS.gene08162.t1 MTR_4g095058 30.286 175 111 3 47 212 405 577 4.55e-14 73.6
MS.gene08162.t1 MTR_4g095058 25.836 329 195 11 46 342 219 530 7.94e-20 90.9
MS.gene08162.t1 MTR_4g095058 23.954 263 176 8 51 302 324 573 4.52e-18 85.5
MS.gene08162.t1 MTR_4g095058 30.286 175 111 3 47 212 403 575 4.79e-14 73.6
MS.gene08162.t1 MTR_5g090420 22.848 302 215 10 48 342 257 547 9.07e-20 90.9
MS.gene08162.t1 MTR_6g005220 27.500 240 136 7 96 301 106 341 9.15e-20 90.5
MS.gene08162.t1 MTR_8g092620 27.570 214 142 5 48 256 11 216 1.28e-18 84.0
MS.gene08162.t1 MTR_8g092620 27.219 169 117 4 89 254 9 174 9.30e-11 61.6
MS.gene08162.t1 MTR_8g106790 32.308 195 120 6 69 253 30 222 1.81e-18 85.1
MS.gene08162.t1 MTR_8g106790 29.348 276 164 13 47 301 55 320 2.80e-18 84.7
MS.gene08162.t1 MTR_8g106790 25.991 227 146 9 113 328 31 246 6.33e-13 68.9
MS.gene08162.t1 MTR_8g045440 25.588 340 189 13 61 342 29 362 6.30e-18 84.7
MS.gene08162.t1 MTR_8g038550 24.662 296 198 10 51 337 179 458 1.22e-17 84.7
MS.gene08162.t1 MTR_8g038550 24.806 258 177 8 49 301 219 464 7.10e-15 76.3
MS.gene08162.t1 MTR_3g045130 28.972 214 146 5 48 258 307 517 2.28e-17 83.6
MS.gene08162.t1 MTR_3g045130 25.000 224 158 4 106 328 280 494 3.85e-17 82.8
MS.gene08162.t1 MTR_3g045130 26.289 194 138 5 63 254 280 470 3.15e-11 64.7
MS.gene08162.t1 MTR_8g045440 25.588 340 189 13 61 342 29 362 2.42e-17 83.6
MS.gene08162.t1 MTR_2g020720 24.927 341 197 11 56 340 107 444 5.06e-17 82.4
MS.gene08162.t1 MTR_3g116500 29.434 265 157 11 60 301 2 259 8.82e-17 79.7
MS.gene08162.t1 MTR_3g116500 27.727 220 140 7 50 251 41 259 4.22e-16 77.8
MS.gene08162.t1 MTR_2g019400 29.240 171 107 4 158 328 15 171 9.78e-17 79.7
MS.gene08162.t1 MTR_2g019400 21.456 261 176 6 61 301 1 252 5.08e-13 68.9
MS.gene08162.t1 MTR_2g019400 20.994 181 118 3 53 209 73 252 3.51e-11 63.5
MS.gene08162.t1 MTR_3g116500 29.588 267 158 11 58 301 110 369 1.29e-16 80.5
MS.gene08162.t1 MTR_3g116500 27.727 220 140 7 50 251 151 369 1.23e-15 77.4
MS.gene08162.t1 MTR_3g116500 21.786 280 195 8 51 312 61 334 1.06e-12 68.9
MS.gene08162.t1 MTR_2g102267 26.636 214 152 4 51 260 55 267 1.28e-15 77.0
MS.gene08162.t1 MTR_1g050340 23.050 282 201 8 63 342 518 785 1.52e-15 78.2
MS.gene08162.t1 MTR_1g050340 23.050 282 201 8 63 342 517 784 1.60e-15 78.2
MS.gene08162.t1 MTR_7g076230 23.288 292 206 9 45 320 359 648 1.61e-15 78.2
MS.gene08162.t1 MTR_7g076230 21.147 279 190 8 48 314 319 579 6.59e-14 73.2
MS.gene08162.t1 MTR_7g076230 24.324 185 131 3 163 345 349 526 2.16e-13 71.6
MS.gene08162.t1 MTR_4g071130 24.312 218 127 5 154 342 22 230 1.63e-15 78.2
MS.gene08162.t1 MTR_4g071130 23.188 276 181 7 91 340 2 272 8.83e-12 67.0
MS.gene08162.t1 MTR_4g071130 23.320 253 172 7 54 306 50 280 3.04e-11 65.1
MS.gene08162.t1 MTR_1g090827 24.424 217 124 6 154 340 22 228 5.53e-15 76.6
MS.gene08162.t1 MTR_1g090827 24.901 253 168 7 54 306 50 280 9.33e-12 66.6
MS.gene08162.t1 MTR_1g090827 22.656 256 167 6 113 342 24 274 1.80e-11 65.9
MS.gene08162.t1 MTR_1g089290 23.032 343 205 11 56 340 124 465 6.34e-15 75.9
MS.gene08162.t1 MTR_3g067940 23.585 212 156 3 48 255 248 457 6.67e-15 75.9
MS.gene08162.t1 MTR_4g123597 33.607 122 79 2 51 172 102 221 7.22e-15 76.3
MS.gene08162.t1 MTR_4g105700 23.509 285 192 8 51 319 355 629 9.46e-15 75.9
MS.gene08162.t1 MTR_4g105700 27.329 161 114 3 50 209 495 653 3.60e-14 73.9
MS.gene08162.t1 MTR_2g054920 26.000 300 160 9 92 342 10 296 1.04e-14 74.7
MS.gene08162.t1 MTR_8g045463 23.684 342 195 12 61 342 29 364 2.37e-14 74.3
MS.gene08162.t1 MTR_8g045470 23.684 342 195 12 61 342 29 364 2.37e-14 74.3
MS.gene08162.t1 MTR_4g111810 21.843 293 212 6 58 342 70 353 2.99e-14 73.6
MS.gene08162.t1 MTR_2g016160 29.452 146 99 4 112 253 122 267 3.32e-14 72.8
MS.gene08162.t1 MTR_4g111810 21.843 293 212 6 58 342 70 353 3.34e-14 73.6
MS.gene08162.t1 MTR_8g027985 23.864 264 183 8 51 301 646 904 3.73e-14 73.9
MS.gene08162.t1 MTR_2g085210 26.378 254 173 8 58 301 568 817 4.83e-14 73.6
MS.gene08162.t1 MTR_8g041740 23.669 338 198 12 61 342 29 362 4.99e-14 73.2
MS.gene08162.t1 MTR_1g081830 23.322 283 199 7 72 345 57 330 7.70e-14 73.2
MS.gene08162.t1 MTR_1g081830 23.322 283 199 7 72 345 29 302 8.00e-14 72.8
MS.gene08162.t1 MTR_4g125710 25.604 207 132 4 48 236 95 297 8.30e-14 71.6
MS.gene08162.t1 MTR_4g125710 23.197 319 203 8 53 342 12 317 4.27e-13 69.7
MS.gene08162.t1 MTR_3g107910 22.569 288 208 7 56 342 622 895 1.27e-13 72.4
MS.gene08162.t1 MTR_3g107910 22.569 288 208 7 56 342 629 902 1.28e-13 72.4
MS.gene08162.t1 MTR_4g077783 20.478 293 216 6 58 342 9 292 1.59e-13 71.6
MS.gene08162.t1 MTR_2g016690 24.473 237 159 6 47 270 85 314 1.64e-13 70.9
MS.gene08162.t1 MTR_2g016690 24.648 284 189 9 56 325 51 323 2.41e-13 70.5
MS.gene08162.t1 MTR_2g016690 23.256 301 196 10 61 342 14 298 7.89e-12 65.9
MS.gene08162.t1 MTR_3g061450 21.141 298 218 7 52 344 16 301 1.95e-13 70.5
MS.gene08162.t1 MTR_2g034500 25.806 217 129 5 48 233 234 449 3.13e-13 71.2
MS.gene08162.t1 MTR_1g021590 27.624 181 117 5 97 269 218 392 4.20e-13 70.5
MS.gene08162.t1 MTR_3g052220 30.952 126 86 1 54 179 263 387 4.78e-13 70.5
MS.gene08162.t1 MTR_3g052220 24.528 159 109 3 106 254 222 379 8.54e-13 69.7
MS.gene08162.t1 MTR_1g044720 25.954 262 177 9 48 301 257 509 4.91e-13 70.1
MS.gene08162.t1 MTR_8g092890 23.488 281 174 10 51 302 226 494 7.57e-13 69.7
MS.gene08162.t1 MTR_2g014020 22.297 296 209 9 51 342 244 522 8.44e-13 69.7
MS.gene08162.t1 MTR_1g087120 33.071 127 80 3 48 171 319 443 1.19e-12 69.7
MS.gene08162.t1 MTR_7g099170 25.764 229 139 6 50 250 231 456 3.63e-12 67.4
MS.gene08162.t1 MTR_7g099170 25.764 229 139 6 50 250 203 428 3.81e-12 67.4
MS.gene08162.t1 MTR_5g085250 26.562 192 130 6 112 301 437 619 4.01e-12 67.8
MS.gene08162.t1 MTR_5g085250 27.979 193 126 7 112 301 333 515 5.13e-12 67.4
MS.gene08162.t1 MTR_2g087640 27.429 175 109 3 88 245 136 309 5.97e-12 66.2
MS.gene08162.t1 MTR_2g087640 25.431 232 150 6 92 309 4 226 4.89e-11 63.5
MS.gene08162.t1 MTR_5g085250 27.979 193 126 7 112 301 300 482 5.97e-12 67.0
MS.gene08162.t1 MTR_7g451830 23.832 214 151 4 50 253 203 414 1.17e-11 65.9
MS.gene08162.t1 MTR_7g047640 23.832 214 151 4 50 253 203 414 1.17e-11 65.9
MS.gene08162.t1 MTR_1g011610 23.762 303 195 11 47 326 545 834 1.28e-11 66.2
MS.gene08162.t1 MTR_7g057540 22.936 218 149 6 50 253 192 404 1.38e-11 65.5
MS.gene08162.t1 MTR_7g055590 22.222 243 158 7 50 266 192 429 1.63e-11 65.5
MS.gene08162.t1 MTR_4g007500 24.138 174 119 2 83 245 185 356 2.01e-11 64.7
MS.gene08162.t1 MTR_8g093540 29.496 139 92 2 35 168 44 181 2.25e-11 65.5
MS.gene08162.t1 MTR_1g011610 25.523 239 159 9 94 326 618 843 2.28e-11 65.5
MS.gene08162.t1 MTR_2g102277 28.313 166 114 4 48 209 92 256 2.48e-11 65.5
MS.gene08162.t1 MTR_2g102277 28.313 166 114 4 48 209 92 256 2.62e-11 65.5
MS.gene08162.t1 MTR_4g011950 28.313 166 114 4 48 209 92 256 3.21e-11 65.1
MS.gene08162.t1 MTR_2g060710 23.364 214 152 5 51 253 214 426 4.28e-11 64.3
MS.gene08162.t1 MTR_8g100005 24.091 220 147 6 94 304 368 576 6.33e-11 63.9
MS.gene08162.t1 MTR_6g005920 23.868 243 138 7 97 301 48 281 7.00e-11 63.5
MS.gene08162.t1 MTR_3g078380 25.852 352 190 16 24 319 36 372 9.56e-11 63.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene08162.t1 AT2G43770 82.899 345 57 1 1 345 1 343 0.0 621
MS.gene08162.t1 AT3G49660 30.537 298 195 6 51 342 20 311 9.03e-42 148
MS.gene08162.t1 AT3G49660 26.364 220 143 6 46 254 104 315 1.90e-21 93.6
MS.gene08162.t1 AT4G02730 29.932 294 180 11 51 333 39 317 3.99e-32 123
MS.gene08162.t1 AT4G02730 27.488 211 144 5 48 251 121 329 8.26e-20 89.4
MS.gene08162.t1 AT5G52820 30.820 305 175 13 51 342 105 386 1.58e-28 115
MS.gene08162.t1 AT5G52820 25.138 362 167 10 35 301 119 471 2.62e-21 95.1
MS.gene08162.t1 AT5G64730 27.243 301 194 9 50 342 13 296 3.73e-27 108
MS.gene08162.t1 AT5G64730 25.000 212 142 5 48 251 95 297 4.05e-12 66.6
MS.gene08162.t1 AT5G08390 26.852 216 149 4 126 340 2 209 1.05e-26 111
MS.gene08162.t1 AT5G08390 24.903 257 176 7 51 302 12 256 3.61e-20 92.4
MS.gene08162.t1 AT5G08390 25.667 300 181 9 48 314 52 342 2.35e-14 74.7
MS.gene08162.t1 AT5G23430 26.267 217 151 4 127 342 3 211 1.44e-25 108
MS.gene08162.t1 AT5G23430 24.335 263 170 8 51 302 12 256 1.43e-20 93.6
MS.gene08162.t1 AT5G23430 27.488 211 145 5 48 255 52 257 5.92e-14 73.6
MS.gene08162.t1 AT5G23430 26.267 217 151 4 127 342 3 211 1.60e-25 108
MS.gene08162.t1 AT5G23430 24.335 263 170 8 51 302 12 256 1.57e-20 93.2
MS.gene08162.t1 AT5G23430 27.488 211 145 5 48 255 52 257 6.84e-14 73.2
MS.gene08162.t1 AT5G23430 26.267 217 151 4 127 342 3 211 1.60e-25 108
MS.gene08162.t1 AT5G23430 24.335 263 170 8 51 302 12 256 1.57e-20 93.2
MS.gene08162.t1 AT5G23430 27.488 211 145 5 48 255 52 257 6.84e-14 73.2
MS.gene08162.t1 AT1G10580 25.170 294 212 7 52 340 279 569 2.50e-24 104
MS.gene08162.t1 AT5G25150 27.935 247 162 5 34 279 404 635 4.27e-24 103
MS.gene08162.t1 AT5G25150 27.562 283 164 7 67 321 364 633 1.08e-21 96.7
MS.gene08162.t1 AT5G25150 24.490 196 137 4 153 345 428 615 3.14e-13 71.2
MS.gene08162.t1 AT5G25150 27.935 247 162 5 34 279 404 635 4.45e-24 103
MS.gene08162.t1 AT5G25150 27.562 283 164 7 67 321 364 633 9.85e-22 96.7
MS.gene08162.t1 AT5G25150 24.490 196 137 4 153 345 428 615 3.18e-13 71.2
MS.gene08162.t1 AT2G41500 27.413 259 175 6 48 304 291 538 5.70e-23 100
MS.gene08162.t1 AT2G41500 25.088 283 198 7 63 342 263 534 2.07e-18 86.7
MS.gene08162.t1 AT2G41500 27.638 199 132 6 143 339 258 446 1.47e-12 68.9
MS.gene08162.t1 AT2G41500 27.413 259 175 6 48 304 291 538 5.70e-23 100
MS.gene08162.t1 AT2G41500 25.088 283 198 7 63 342 263 534 2.07e-18 86.7
MS.gene08162.t1 AT2G41500 27.638 199 132 6 143 339 258 446 1.47e-12 68.9
MS.gene08162.t1 AT5G08560 24.667 300 209 10 50 342 269 558 4.17e-22 97.8
MS.gene08162.t1 AT5G08560 24.667 300 209 10 50 342 269 558 4.17e-22 97.8
MS.gene08162.t1 AT5G08560 24.667 300 209 10 50 342 269 558 4.17e-22 97.8
MS.gene08162.t1 AT1G61210 24.057 212 152 3 130 340 5 208 5.15e-22 97.8
MS.gene08162.t1 AT1G61210 26.971 241 160 6 66 302 27 255 9.68e-22 97.1
MS.gene08162.t1 AT1G61210 25.346 217 150 5 113 327 31 237 5.38e-17 82.8
MS.gene08162.t1 AT1G61210 27.230 213 143 6 48 255 51 256 8.14e-13 70.1
MS.gene08162.t1 AT5G50230 24.521 261 192 2 53 313 223 478 6.72e-22 97.1
MS.gene08162.t1 AT5G50230 29.048 210 134 6 51 251 305 508 2.38e-15 77.4
MS.gene08162.t1 AT1G61210 24.057 212 152 3 130 340 5 208 9.31e-22 97.1
MS.gene08162.t1 AT1G61210 26.971 241 160 6 66 302 27 255 1.70e-21 96.3
MS.gene08162.t1 AT1G61210 25.346 217 150 5 113 327 31 237 9.73e-17 82.0
MS.gene08162.t1 AT1G61210 27.230 213 143 6 48 255 51 256 1.35e-12 69.3
MS.gene08162.t1 AT1G61210 24.057 212 152 3 130 340 5 208 9.75e-22 97.1
MS.gene08162.t1 AT1G61210 26.971 241 160 6 66 302 27 255 1.64e-21 96.3
MS.gene08162.t1 AT1G61210 25.346 217 150 5 113 327 31 237 9.46e-17 82.0
MS.gene08162.t1 AT1G61210 27.230 213 143 6 48 255 51 256 1.26e-12 69.7
MS.gene08162.t1 AT1G11160 24.528 212 151 3 130 340 5 208 1.96e-21 96.3
MS.gene08162.t1 AT1G11160 26.556 241 161 6 66 302 27 255 2.23e-21 95.9
MS.gene08162.t1 AT1G11160 26.554 177 115 4 155 327 72 237 5.21e-16 79.7
MS.gene08162.t1 AT1G11160 27.885 208 146 4 49 255 52 256 2.94e-13 71.2
MS.gene08162.t1 AT1G11160 26.506 166 112 6 48 209 93 252 1.25e-11 66.2
MS.gene08162.t1 AT1G11160 24.528 212 151 3 130 340 5 208 2.06e-21 95.9
MS.gene08162.t1 AT1G11160 26.556 241 161 6 66 302 27 255 2.69e-21 95.9
MS.gene08162.t1 AT1G11160 26.554 177 115 4 155 327 72 237 5.31e-16 79.7
MS.gene08162.t1 AT1G11160 27.885 208 146 4 49 255 52 256 3.22e-13 71.2
MS.gene08162.t1 AT1G11160 26.506 166 112 6 48 209 93 252 1.43e-11 66.2
MS.gene08162.t1 AT1G11160 24.528 212 151 3 130 340 5 208 2.10e-21 95.9
MS.gene08162.t1 AT1G11160 26.556 241 161 6 66 302 27 255 2.53e-21 95.9
MS.gene08162.t1 AT1G11160 26.554 177 115 4 155 327 72 237 5.43e-16 79.7
MS.gene08162.t1 AT1G11160 27.885 208 146 4 49 255 52 256 3.03e-13 71.2
MS.gene08162.t1 AT1G11160 26.506 166 112 6 48 209 93 252 1.36e-11 66.2
MS.gene08162.t1 AT3G16650 24.927 341 212 12 4 341 133 432 7.21e-21 93.6
MS.gene08162.t1 AT5G67320 26.184 359 214 12 15 345 235 570 2.67e-20 92.4
MS.gene08162.t1 AT5G67320 23.301 309 210 10 9 302 314 610 5.83e-19 88.6
MS.gene08162.t1 AT5G67320 29.714 175 112 3 47 212 440 612 5.03e-14 73.6
MS.gene08162.t1 AT5G54520 25.538 325 221 11 35 344 139 457 3.04e-20 91.7
MS.gene08162.t1 AT3G18130 29.123 285 172 9 69 341 30 296 4.02e-20 90.1
MS.gene08162.t1 AT3G18130 30.515 272 159 13 51 301 59 321 6.54e-19 86.7
MS.gene08162.t1 AT3G18130 27.632 228 141 6 51 256 101 326 4.55e-16 78.6
MS.gene08162.t1 AT1G48630 31.959 194 122 4 69 253 30 222 1.98e-19 88.2
MS.gene08162.t1 AT1G48630 27.407 270 170 11 51 301 59 321 3.61e-17 81.6
MS.gene08162.t1 AT1G48630 26.316 228 144 6 51 256 101 326 9.02e-15 74.7
MS.gene08162.t1 AT1G48630 25.692 253 161 11 92 328 5 246 5.20e-14 72.4
MS.gene08162.t1 AT1G18080 29.572 257 154 9 69 312 30 272 2.45e-19 87.8
MS.gene08162.t1 AT1G18080 27.778 270 170 11 51 301 59 322 4.77e-17 81.3
MS.gene08162.t1 AT1G18080 26.638 229 143 6 51 256 101 327 1.03e-14 74.3
MS.gene08162.t1 AT1G18080 27.165 254 157 11 92 328 5 247 1.16e-14 74.3
MS.gene08162.t1 AT5G13480 24.232 293 203 9 51 337 130 409 5.76e-19 88.6
MS.gene08162.t1 AT5G13480 24.232 293 203 9 51 337 107 386 6.69e-19 88.2
MS.gene08162.t1 AT5G13480 24.232 293 203 9 51 337 107 386 7.11e-19 88.2
MS.gene08162.t1 AT5G13480 24.232 293 203 9 51 337 119 398 8.11e-19 88.2
MS.gene08162.t1 AT4G15900 25.170 294 193 9 50 341 171 439 1.26e-18 87.0
MS.gene08162.t1 AT4G15900 25.731 171 125 2 85 254 163 332 6.83e-16 79.0
MS.gene08162.t1 AT4G15900 27.143 210 139 5 131 337 167 365 8.59e-15 75.5
MS.gene08162.t1 AT5G43920 24.679 312 195 9 48 339 217 508 2.42e-18 86.3
MS.gene08162.t1 AT1G15440 23.077 273 157 7 45 315 339 560 3.85e-18 86.3
MS.gene08162.t1 AT1G15440 24.623 199 141 3 149 345 315 506 2.37e-12 68.6
MS.gene08162.t1 AT1G15440 23.077 273 157 7 45 315 379 600 4.33e-18 85.9
MS.gene08162.t1 AT1G15440 24.623 199 141 3 149 345 355 546 2.78e-12 68.6
MS.gene08162.t1 AT3G15354 27.925 265 169 8 51 301 280 536 1.25e-17 84.3
MS.gene08162.t1 AT3G15354 27.925 265 169 8 51 301 280 536 1.25e-17 84.3
MS.gene08162.t1 AT1G11160 25.641 156 108 2 185 340 19 166 1.43e-17 84.3
MS.gene08162.t1 AT1G11160 26.554 177 115 4 155 327 30 195 5.01e-16 79.7
MS.gene08162.t1 AT1G11160 27.670 206 145 4 51 255 12 214 6.27e-13 70.5
MS.gene08162.t1 AT1G11160 26.506 166 112 6 48 209 51 210 1.22e-11 66.6
MS.gene08162.t1 AT3G15354 27.925 265 169 8 51 301 530 786 1.53e-17 84.3
MS.gene08162.t1 AT4G03020 25.385 260 160 8 96 340 227 467 2.99e-17 83.2
MS.gene08162.t1 AT4G03020 25.385 260 160 8 96 340 227 467 2.99e-17 83.2
MS.gene08162.t1 AT4G03020 25.385 260 160 8 96 340 227 467 2.99e-17 83.2
MS.gene08162.t1 AT1G71840 22.571 350 210 10 45 344 60 398 3.84e-17 82.4
MS.gene08162.t1 AT1G71840 23.874 222 161 4 45 261 187 405 2.41e-16 80.1
MS.gene08162.t1 AT3G27640 25.085 295 167 8 96 345 126 411 1.29e-16 81.3
MS.gene08162.t1 AT3G27640 25.085 295 167 8 96 345 107 392 1.51e-16 80.9
MS.gene08162.t1 AT4G29830 24.444 315 204 7 53 342 12 317 5.40e-16 78.2
MS.gene08162.t1 AT4G29830 25.123 203 138 3 48 236 95 297 6.28e-12 66.2
MS.gene08162.t1 AT1G62020 25.571 219 123 6 154 342 22 230 5.72e-16 79.7
MS.gene08162.t1 AT1G62020 22.917 288 184 11 61 340 15 272 2.18e-13 72.0
MS.gene08162.t1 AT1G62020 23.529 255 169 8 54 306 50 280 3.12e-12 68.2
MS.gene08162.t1 AT5G16750 23.776 286 190 7 51 319 354 628 9.06e-16 79.0
MS.gene08162.t1 AT5G16750 25.000 272 178 11 50 305 396 657 4.23e-15 77.0
MS.gene08162.t1 AT5G16750 23.693 287 191 9 76 342 331 609 2.73e-11 65.5
MS.gene08162.t1 AT5G56130 21.296 324 224 8 20 339 1 297 9.66e-16 77.4
MS.gene08162.t1 AT5G56130 23.529 255 182 5 95 345 17 262 6.44e-12 66.2
MS.gene08162.t1 AT5G13840 23.982 221 162 3 48 264 250 468 1.45e-15 77.8
MS.gene08162.t1 AT5G13840 23.982 221 162 3 48 264 250 468 1.45e-15 77.8
MS.gene08162.t1 AT4G34460 29.680 219 136 8 50 251 151 368 1.88e-15 77.0
MS.gene08162.t1 AT4G34460 28.030 264 165 9 58 301 110 368 3.11e-15 76.3
MS.gene08162.t1 AT4G34460 29.680 219 136 8 50 251 146 363 2.12e-15 77.0
MS.gene08162.t1 AT4G34460 28.030 264 165 9 58 301 105 363 3.17e-15 76.3
MS.gene08162.t1 AT4G34460 28.030 264 165 9 58 301 48 306 2.97e-15 75.9
MS.gene08162.t1 AT3G21540 36.220 127 75 3 51 175 102 224 3.98e-15 77.0
MS.gene08162.t1 AT3G18140 24.286 280 191 8 56 325 36 304 5.45e-15 75.1
MS.gene08162.t1 AT3G18140 23.636 275 152 7 113 337 8 274 6.72e-15 74.7
MS.gene08162.t1 AT3G18140 23.605 233 162 6 47 270 70 295 1.51e-12 67.8
MS.gene08162.t1 AT4G32551 22.776 281 206 7 63 342 697 967 1.38e-14 75.5
MS.gene08162.t1 AT4G32551 22.776 281 206 7 63 342 659 929 1.60e-14 75.1
MS.gene08162.t1 AT2G47410 25.352 213 131 4 48 233 47 258 3.67e-14 74.3
MS.gene08162.t1 AT2G47410 25.352 213 131 4 48 233 229 440 3.86e-14 74.3
MS.gene08162.t1 AT2G47410 25.352 213 131 4 48 233 228 439 4.08e-14 74.3
MS.gene08162.t1 AT1G53090 26.887 212 145 5 51 253 259 469 4.49e-14 73.6
MS.gene08162.t1 AT1G53090 26.887 212 145 5 51 253 480 690 5.75e-14 73.6
MS.gene08162.t1 AT1G53090 26.887 212 145 5 51 253 480 690 5.75e-14 73.6
MS.gene08162.t1 AT1G53090 26.887 212 145 5 51 253 480 690 5.75e-14 73.6
MS.gene08162.t1 AT4G22910 24.402 209 152 3 51 255 255 461 9.60e-14 72.4
MS.gene08162.t1 AT2G21390 23.024 291 186 11 58 340 12 272 2.57e-13 71.6
MS.gene08162.t1 AT2G21390 23.715 253 171 7 54 306 50 280 3.96e-13 71.2
MS.gene08162.t1 AT1G73720 32.283 127 82 3 54 179 262 385 3.60e-13 70.9
MS.gene08162.t1 AT1G73720 26.190 168 114 3 96 254 211 377 1.55e-12 68.9
MS.gene08162.t1 AT1G73720 25.980 204 127 7 155 342 227 422 4.35e-11 64.3
MS.gene08162.t1 AT2G22040 24.126 286 192 10 70 342 13 286 4.67e-13 69.3
MS.gene08162.t1 AT2G22040 24.312 218 152 6 47 254 76 290 3.10e-11 63.9
MS.gene08162.t1 AT1G79990 30.120 166 111 4 48 209 92 256 4.82e-13 70.9
MS.gene08162.t1 AT1G79990 30.120 166 111 4 48 209 92 256 5.12e-13 70.5
MS.gene08162.t1 AT2G32700 22.545 275 158 8 56 329 530 750 5.57e-13 70.5
MS.gene08162.t1 AT4G11110 24.265 272 176 8 55 301 711 977 6.37e-13 70.5
MS.gene08162.t1 AT2G32700 22.545 275 158 8 56 329 511 731 6.38e-13 70.5
MS.gene08162.t1 AT2G32700 22.545 275 158 8 56 329 511 731 6.38e-13 70.5
MS.gene08162.t1 AT2G32700 22.545 275 158 8 56 329 511 731 6.38e-13 70.5
MS.gene08162.t1 AT2G32700 22.545 275 158 8 56 329 511 731 6.38e-13 70.5
MS.gene08162.t1 AT2G32700 22.545 275 158 8 56 329 511 731 6.38e-13 70.5
MS.gene08162.t1 AT2G47410 24.215 223 131 4 48 233 229 450 6.74e-13 70.5
MS.gene08162.t1 AT2G47410 24.215 223 131 4 48 233 47 268 6.77e-13 70.5
MS.gene08162.t1 AT2G47410 24.215 223 131 4 48 233 47 268 6.77e-13 70.5
MS.gene08162.t1 AT2G32700 22.545 275 158 8 56 329 509 729 6.79e-13 70.1
MS.gene08162.t1 AT3G05090 24.382 283 200 7 68 345 53 326 7.24e-13 70.1
MS.gene08162.t1 AT3G05090 24.382 283 200 7 68 345 53 326 7.24e-13 70.1
MS.gene08162.t1 AT3G05090 24.382 283 200 7 68 345 53 326 7.24e-13 70.1
MS.gene08162.t1 AT4G34380 24.255 235 154 7 97 311 234 464 8.39e-13 69.7
MS.gene08162.t1 AT2G32950 26.368 201 136 7 104 301 313 504 1.05e-12 69.3
MS.gene08162.t1 AT2G34260 21.107 289 215 6 58 342 9 288 1.23e-12 68.6
MS.gene08162.t1 AT2G32950 26.368 201 136 7 104 301 426 617 1.40e-12 69.3
MS.gene08162.t1 AT2G33340 25.000 260 174 9 51 301 260 507 1.84e-12 68.6
MS.gene08162.t1 AT2G33340 25.397 189 127 6 155 337 236 416 5.11e-11 64.3
MS.gene08162.t1 AT2G33340 25.000 260 174 9 51 301 260 507 1.84e-12 68.6
MS.gene08162.t1 AT2G33340 25.397 189 127 6 155 337 236 416 5.11e-11 64.3
MS.gene08162.t1 AT1G15470 23.667 300 167 9 92 342 5 291 1.85e-12 67.8
MS.gene08162.t1 AT3G15354 26.415 265 165 9 51 301 530 778 2.25e-12 68.6
MS.gene08162.t1 AT5G64630 26.471 204 117 5 51 240 60 244 1.06e-11 65.9
MS.gene08162.t1 AT4G11920 24.528 212 154 3 48 255 244 453 1.11e-11 66.2
MS.gene08162.t1 AT2G46290 30.000 150 87 3 113 245 190 338 1.15e-11 65.5
MS.gene08162.t1 AT3G15980 28.313 166 114 4 48 209 92 256 1.21e-11 66.6
MS.gene08162.t1 AT3G15980 25.481 208 148 5 58 260 60 265 4.94e-11 64.7
MS.gene08162.t1 AT3G15980 28.313 166 114 4 48 209 92 256 1.23e-11 66.2
MS.gene08162.t1 AT3G15980 25.481 208 148 5 58 260 60 265 4.99e-11 64.7
MS.gene08162.t1 AT3G15980 28.313 166 114 4 48 209 92 256 1.27e-11 66.2
MS.gene08162.t1 AT3G15980 25.481 208 148 5 58 260 60 265 5.00e-11 64.7
MS.gene08162.t1 AT1G15470 27.600 250 159 8 92 332 5 241 1.29e-11 64.7
MS.gene08162.t1 AT3G15980 28.313 166 114 4 48 209 92 256 1.32e-11 66.2
MS.gene08162.t1 AT3G15980 25.481 208 148 5 58 260 60 265 5.83e-11 64.3
MS.gene08162.t1 AT3G15980 28.313 166 114 4 48 209 92 256 1.32e-11 66.2
MS.gene08162.t1 AT3G15980 25.481 208 148 5 58 260 60 265 5.83e-11 64.3
MS.gene08162.t1 AT3G15980 28.313 166 114 4 48 209 92 256 1.32e-11 66.2
MS.gene08162.t1 AT3G15980 25.481 208 148 5 58 260 60 265 5.83e-11 64.3
MS.gene08162.t1 AT3G15980 28.313 166 114 4 48 209 92 256 1.32e-11 66.2
MS.gene08162.t1 AT3G15980 25.481 208 148 5 58 260 60 265 5.83e-11 64.3
MS.gene08162.t1 AT1G52360 28.313 166 114 4 48 209 136 300 1.45e-11 66.2
MS.gene08162.t1 AT5G64630 26.471 204 117 5 51 240 60 244 1.54e-11 65.9
MS.gene08162.t1 AT3G42660 24.291 247 141 6 58 303 107 308 1.58e-11 66.2
MS.gene08162.t1 AT1G52360 28.313 166 114 4 48 209 92 256 1.71e-11 65.9
MS.gene08162.t1 AT1G52360 28.313 166 114 4 48 209 92 256 1.71e-11 65.9
MS.gene08162.t1 AT1G52360 28.313 166 114 4 48 209 92 256 1.82e-11 65.9
MS.gene08162.t1 AT1G29260 27.083 144 101 4 113 252 122 265 2.08e-11 64.7
MS.gene08162.t1 AT1G29260 26.244 221 141 11 136 342 51 263 6.64e-11 63.2
MS.gene08162.t1 AT3G21060 22.093 344 202 11 58 342 26 362 2.29e-11 65.1
MS.gene08162.t1 AT2G33340 26.087 207 136 7 51 248 260 458 2.31e-11 65.1
MS.gene08162.t1 AT2G33340 25.397 189 127 6 155 337 236 416 4.00e-11 64.3
MS.gene08162.t1 AT2G26490 27.072 181 118 6 97 269 205 379 3.03e-11 64.7
MS.gene08162.t1 AT4G34460 21.724 290 201 11 34 303 41 324 3.17e-11 64.3
MS.gene08162.t1 AT5G49430 31.746 126 83 2 48 171 238 362 3.56e-11 65.1
MS.gene08162.t1 AT5G49430 31.746 126 83 2 48 171 238 362 3.56e-11 65.1
MS.gene08162.t1 AT3G15610 25.743 303 200 13 49 342 10 296 3.77e-11 63.9
MS.gene08162.t1 AT2G05720 26.984 189 100 6 147 328 69 226 6.93e-11 62.8
MS.gene08162.t1 AT3G44530 24.710 259 128 9 58 315 16 208 7.19e-11 63.9
MS.gene08162.t1 AT1G04510 24.468 188 131 6 155 337 236 417 7.25e-11 63.5
MS.gene08162.t1 AT1G04510 24.468 188 131 6 155 337 236 417 7.58e-11 63.5
MS.gene08162.t1 AT3G44530 24.710 259 128 9 58 315 16 208 8.36e-11 63.9
MS.gene08162.t1 AT1G49450 27.895 190 123 7 89 270 237 420 9.99e-11 63.2

Find 94 sgRNAs with CRISPR-Local

Find 109 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AAATCGATGTGTGAAGATTT+TGG 0.210538 7.3:-22480127 MS.gene08162:CDS
ATGATGGAACAGCAAAATTA+TGG 0.214770 7.3:-22480422 MS.gene08162:CDS
TGGGGATTGCAAGAACTTTA+TGG 0.220748 7.3:-22480649 MS.gene08162:CDS
CTGATAAAACACTTAGGTTA+TGG 0.310856 7.3:-22480551 MS.gene08162:CDS
TACAATGCTCCTCATGCTCC+TGG 0.317919 7.3:-22480825 MS.gene08162:CDS
AAGAACTTTATGGTTCTAAA+AGG 0.322543 7.3:-22480639 MS.gene08162:CDS
TTGATAATGATGTCAAGATA+TGG 0.329411 7.3:-22480299 MS.gene08162:CDS
GGTATTTATCAGGAAATGTT+TGG 0.338593 7.3:+22480376 None:intergenic
TGGATTGCAAGCTTTGCATT+TGG 0.355336 7.3:-22480173 MS.gene08162:CDS
CATCCCAATGAACCTATTGT+TGG 0.366502 7.3:-22479931 MS.gene08162:CDS
CTGATCGAATGGTTTACATC+TGG 0.370909 7.3:-22480023 MS.gene08162:CDS
GAGGTCCGCTGCTTTCCATT+TGG 0.370946 7.3:+22480801 None:intergenic
TCCTGTTGGATTGAACTTCA+TGG 0.372012 7.3:+22480725 None:intergenic
TCAACAGTTGCTGTCCTTCC+CGG 0.373390 7.3:-22480476 MS.gene08162:CDS
GCAGTAATCTGGTATTTATC+AGG 0.374593 7.3:+22480366 None:intergenic
GGATTGCAAGCTTTGCATTT+GGG 0.377088 7.3:-22480172 MS.gene08162:CDS
TGATCCAACAATAGGTTCAT+TGG 0.384589 7.3:+22479927 None:intergenic
CGCTGCTTTCCATTTGGCCC+AGG 0.389260 7.3:+22480807 None:intergenic
AAAGCAGCGGACCTCAAGTT+TGG 0.390848 7.3:-22480793 MS.gene08162:CDS
AGTGACAAGCAGATTTATCT+TGG 0.392857 7.3:-22479898 MS.gene08162:CDS
TGATAAAACACTTAGGTTAT+GGG 0.394014 7.3:-22480550 MS.gene08162:CDS
CCTCATGCTCCTGGGCCAAA+TGG 0.403672 7.3:-22480816 MS.gene08162:CDS
ACAGGATCAGTCGTTGCATC+TGG 0.404975 7.3:-22480708 MS.gene08162:CDS
CTGCTACATGATCCAACAAT+AGG 0.437498 7.3:+22479919 None:intergenic
AGAAGCTGACAGCAGTAATC+TGG 0.437617 7.3:+22480355 None:intergenic
GTGACAAGCAGATTTATCTT+GGG 0.440302 7.3:-22479897 MS.gene08162:CDS
ACCATGAAGTTCAATCCAAC+AGG 0.451176 7.3:-22480726 MS.gene08162:CDS
GATCCAACAATAGGTTCATT+GGG 0.458166 7.3:+22479928 None:intergenic
GTTGTCAGTGGCTCTGATGA+TGG 0.458547 7.3:-22480438 MS.gene08162:CDS
TGATGGAACAGCAAAATTAT+GGG 0.459959 7.3:-22480421 MS.gene08162:CDS
GCTGTAACCTTGCTTCCATC+AGG 0.459979 7.3:+22480054 None:intergenic
TGATCGAATGGTTTACATCT+GGG 0.474757 7.3:-22480022 MS.gene08162:CDS
GTTGCTGTCCTTCCCGGAGG+GGG 0.480310 7.3:-22480470 MS.gene08162:CDS
GAACATGCTCTGTCAGTTGT+TGG 0.481272 7.3:-22480879 MS.gene08162:CDS
TGATAATGATGTCAAGATAT+GGG 0.481545 7.3:-22480298 MS.gene08162:CDS
TGACCGGTCAGCAACATGAT+TGG 0.490379 7.3:+22480765 None:intergenic
AGGTTATGGGATACAGAAAC+AGG 0.491394 7.3:-22480537 MS.gene08162:CDS
GATGGAAGCAAGGTTACAGC+TGG 0.492182 7.3:-22480051 MS.gene08162:CDS
GATCTTCACTGGACTTCAGA+TGG 0.494128 7.3:-22480597 MS.gene08162:CDS
ATTATGGGATATGCGTCAAA+GGG 0.495104 7.3:-22480406 MS.gene08162:CDS
ATACAATATTCTTCGAGAAG+TGG 0.496146 7.3:+22479996 None:intergenic
GTGAGAAGGTAGGAGCCATC+AGG 0.504631 7.3:+22480204 None:intergenic
CAGTTGCTGTCCTTCCCGGA+GGG 0.504648 7.3:-22480472 MS.gene08162:CDS
AGCTGGGAGTTCTGATCGAA+TGG 0.504723 7.3:-22480034 MS.gene08162:CDS
GGAGCATGAGGAGCATTGTA+TGG 0.510618 7.3:+22480828 None:intergenic
CAACAATAGGTTCATTGGGA+TGG 0.512229 7.3:+22479932 None:intergenic
AATTATGGGATATGCGTCAA+AGG 0.514841 7.3:-22480407 MS.gene08162:CDS
GAGGTTACCATGACACTTCA+AGG 0.517004 7.3:-22480261 MS.gene08162:CDS
AAGATATGGGATTTGCGTAA+AGG 0.525685 7.3:-22480285 MS.gene08162:CDS
GGGCCACCTCTTGTTGTCAG+TGG 0.528777 7.3:-22480450 MS.gene08162:CDS
AGTTGTTGGTTCAAAGCCAA+TGG 0.529017 7.3:-22480865 MS.gene08162:CDS
AGAATATTGTATAAGCTACC+TGG 0.531788 7.3:-22479985 MS.gene08162:CDS
CCATTTGGCCCAGGAGCATG+AGG 0.537789 7.3:+22480816 None:intergenic
TTTATCAGGAAATGTTTGGA+TGG 0.545878 7.3:+22480380 None:intergenic
AATCCATGCCATTGGTGAGA+AGG 0.550055 7.3:+22480190 None:intergenic
TTCACCAGGAAAACCTTGCA+TGG 0.551743 7.3:+22480905 None:intergenic
AGAATTTGTTGAAATGTGGC+TGG 0.551762 7.3:-22480080 MS.gene08162:CDS
GGCTCCTACCTTCTCACCAA+TGG 0.554649 7.3:-22480198 MS.gene08162:CDS
GGCACAGTAGACCATTCCAT+TGG 0.559084 7.3:+22480849 None:intergenic
TCTCCAATCATGTTGCTGAC+CGG 0.559881 7.3:-22480768 MS.gene08162:CDS
ATATACAGCACTCTGGTGAC+CGG 0.570974 7.3:+22480749 None:intergenic
CTACCTTCTCACCAATGGCA+TGG 0.574146 7.3:-22480193 MS.gene08162:CDS
TTTCCTTTGGAATGTGCATG+GGG 0.575575 7.3:-22480667 MS.gene08162:CDS
ATCTTCACTGGACTTCAGAT+GGG 0.576718 7.3:-22480596 MS.gene08162:CDS
GATTGGAGATTCCAAACTTG+AGG 0.579358 7.3:+22480782 None:intergenic
AGTTGCTGTCCTTCCCGGAG+GGG 0.581679 7.3:-22480471 MS.gene08162:CDS
GAGAAGAATTTGTTGAAATG+TGG 0.585649 7.3:-22480084 MS.gene08162:CDS
TGACAAGCAGATTTATCTTG+GGG 0.590927 7.3:-22479896 MS.gene08162:CDS
ACAATGCTCCTCATGCTCCT+GGG 0.590964 7.3:-22480824 MS.gene08162:CDS
CCAGCCCTGATAAAACACTT+AGG 0.594684 7.3:-22480557 MS.gene08162:CDS
CATGCCATTGGTGAGAAGGT+AGG 0.595983 7.3:+22480194 None:intergenic
TTGGTTCAAAGCCAATGGAA+TGG 0.596893 7.3:-22480860 MS.gene08162:CDS
AAGCTTGCAATCCATGCCAT+TGG 0.602648 7.3:+22480182 None:intergenic
GATGCAACGACTGATCCTGT+TGG 0.603708 7.3:+22480711 None:intergenic
AAATGTGGCTGGTCACCTGA+TGG 0.605504 7.3:-22480069 MS.gene08162:CDS
AGTATGCAATTGAGTCCTGA+TGG 0.607796 7.3:-22480219 MS.gene08162:CDS
CTGGTCACCTGATGGAAGCA+AGG 0.609923 7.3:-22480061 MS.gene08162:CDS
TTAACAGATCCATTGTGCCC+AGG 0.610020 7.3:+22479967 None:intergenic
ATGGGATTTGCGTAAAGGCG+AGG 0.610417 7.3:-22480280 MS.gene08162:CDS
TCATGGTATATACAGCACTC+TGG 0.613882 7.3:+22480742 None:intergenic
GTAGCAAAGGTCACCATGCA+AGG 0.614816 7.3:-22480918 None:intergenic
TCAGAGCCACTGACAACAAG+AGG 0.616051 7.3:+22480444 None:intergenic
GAATATTGTATAAGCTACCT+GGG 0.618052 7.3:-22479984 MS.gene08162:CDS
AATCCCCATGCACATTCCAA+AGG 0.619475 7.3:+22480664 None:intergenic
ACAGTTGCTGTCCTTCCCGG+AGG 0.624368 7.3:-22480473 MS.gene08162:CDS
TATAAGCTACCTGGGCACAA+TGG 0.631539 7.3:-22479976 MS.gene08162:CDS
CTGGGCCAAATGGAAAGCAG+CGG 0.631637 7.3:-22480806 MS.gene08162:CDS
GCCTCAGATAAGATCTACAC+TGG 0.646201 7.3:-22480327 MS.gene08162:CDS
ATGGAAGCAAGGTTACAGCT+GGG 0.648545 7.3:-22480050 MS.gene08162:CDS
TTGATGACCTTGAAGTGTCA+TGG 0.649986 7.3:+22480254 None:intergenic
GAGCCACTGACAACAAGAGG+TGG 0.665793 7.3:+22480447 None:intergenic
ACCAGTGTAGATCTTATCTG+AGG 0.669830 7.3:+22480326 None:intergenic
TCAGATAAGATCTACACTGG+TGG 0.683289 7.3:-22480324 MS.gene08162:CDS
TTATGGGATATGCGTCAAAG+GGG 0.713777 7.3:-22480405 MS.gene08162:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
! AGGAAAACAAATCAAAAAGA+TGG - chr7.3:22480274-22480293 MS.gene08162:CDS 25.0%
! TGATAAAACACTTAGGTTAT+GGG - chr7.3:22480241-22480260 MS.gene08162:CDS 25.0%
!! ATAACCTAAGTGTTTTATCA+GGG + chr7.3:22480241-22480260 None:intergenic 25.0%
!! ATGACAAAGAAATTTTCCTT+TGG - chr7.3:22480111-22480130 MS.gene08162:CDS 25.0%
!! TGATAATGATGTCAAGATAT+GGG - chr7.3:22480493-22480512 MS.gene08162:CDS 25.0%
!!! AAGAACTTTATGGTTCTAAA+AGG - chr7.3:22480152-22480171 MS.gene08162:CDS 25.0%
!!! TTGATAATGATGTCAAGATA+TGG - chr7.3:22480492-22480511 MS.gene08162:CDS 25.0%
AGAATATTGTATAAGCTACC+TGG - chr7.3:22480806-22480825 MS.gene08162:CDS 30.0%
ATACAATATTCTTCGAGAAG+TGG + chr7.3:22480798-22480817 None:intergenic 30.0%
CTGATAAAACACTTAGGTTA+TGG - chr7.3:22480240-22480259 MS.gene08162:CDS 30.0%
GAATATTGTATAAGCTACCT+GGG - chr7.3:22480807-22480826 MS.gene08162:CDS 30.0%
GGTATTTATCAGGAAATGTT+TGG + chr7.3:22480418-22480437 None:intergenic 30.0%
TGATGGAACAGCAAAATTAT+GGG - chr7.3:22480370-22480389 MS.gene08162:CDS 30.0%
TTTATCAGGAAATGTTTGGA+TGG + chr7.3:22480414-22480433 None:intergenic 30.0%
! AAATCGATGTGTGAAGATTT+TGG - chr7.3:22480664-22480683 MS.gene08162:CDS 30.0%
! ATGATGGAACAGCAAAATTA+TGG - chr7.3:22480369-22480388 MS.gene08162:CDS 30.0%
! CATAACCTAAGTGTTTTATC+AGG + chr7.3:22480242-22480261 None:intergenic 30.0%
!! GAGAAGAATTTGTTGAAATG+TGG - chr7.3:22480707-22480726 MS.gene08162:CDS 30.0%
AAGATATGGGATTTGCGTAA+AGG - chr7.3:22480506-22480525 MS.gene08162:CDS 35.0%
AATTATGGGATATGCGTCAA+AGG - chr7.3:22480384-22480403 MS.gene08162:CDS 35.0%
AGTGACAAGCAGATTTATCT+TGG - chr7.3:22480893-22480912 MS.gene08162:CDS 35.0%
ATTATGGGATATGCGTCAAA+GGG - chr7.3:22480385-22480404 MS.gene08162:CDS 35.0%
GATCCAACAATAGGTTCATT+GGG + chr7.3:22480866-22480885 None:intergenic 35.0%
GCAGTAATCTGGTATTTATC+AGG + chr7.3:22480428-22480447 None:intergenic 35.0%
GTGACAAGCAGATTTATCTT+GGG - chr7.3:22480894-22480913 MS.gene08162:CDS 35.0%
TGACAAGCAGATTTATCTTG+GGG - chr7.3:22480895-22480914 MS.gene08162:CDS 35.0%
TGATCCAACAATAGGTTCAT+TGG + chr7.3:22480867-22480886 None:intergenic 35.0%
TGATCGAATGGTTTACATCT+GGG - chr7.3:22480769-22480788 MS.gene08162:CDS 35.0%
!! AGAATTTGTTGAAATGTGGC+TGG - chr7.3:22480711-22480730 MS.gene08162:CDS 35.0%
!! ATCGATTTTGTGGAGCATAT+GGG + chr7.3:22480652-22480671 None:intergenic 35.0%
!! GATGTGTGAAGATTTTGGAA+GGG - chr7.3:22480669-22480688 MS.gene08162:CDS 35.0%
!!! ATCTTCACACATCGATTTTG+TGG + chr7.3:22480662-22480681 None:intergenic 35.0%
!!! ATGCTGTTTTAGATCTTCAC+TGG - chr7.3:22480183-22480202 MS.gene08162:CDS 35.0%
!!! ATTTTCCTTTGGAATGTGCA+TGG - chr7.3:22480122-22480141 MS.gene08162:CDS 35.0%
!!! TTTTCCTTTGGAATGTGCAT+GGG - chr7.3:22480123-22480142 MS.gene08162:CDS 35.0%
ACCAGTGTAGATCTTATCTG+AGG + chr7.3:22480468-22480487 None:intergenic 40.0%
ACCATGAAGTTCAATCCAAC+AGG - chr7.3:22480065-22480084 MS.gene08162:CDS 40.0%
AGGTTATGGGATACAGAAAC+AGG - chr7.3:22480254-22480273 MS.gene08162:CDS 40.0%
AGTATGCAATTGAGTCCTGA+TGG - chr7.3:22480572-22480591 MS.gene08162:CDS 40.0%
ATCTTCACTGGACTTCAGAT+GGG - chr7.3:22480195-22480214 MS.gene08162:CDS 40.0%
CAACAATAGGTTCATTGGGA+TGG + chr7.3:22480862-22480881 None:intergenic 40.0%
CATCCCAATGAACCTATTGT+TGG - chr7.3:22480860-22480879 MS.gene08162:CDS 40.0%
CTGATCGAATGGTTTACATC+TGG - chr7.3:22480768-22480787 MS.gene08162:CDS 40.0%
CTGCTACATGATCCAACAAT+AGG + chr7.3:22480875-22480894 None:intergenic 40.0%
GATTGGAGATTCCAAACTTG+AGG + chr7.3:22480012-22480031 None:intergenic 40.0%
GGATTGCAAGCTTTGCATTT+GGG - chr7.3:22480619-22480638 MS.gene08162:CDS 40.0%
TCAGATAAGATCTACACTGG+TGG - chr7.3:22480467-22480486 MS.gene08162:CDS 40.0%
TCATGGTATATACAGCACTC+TGG + chr7.3:22480052-22480071 None:intergenic 40.0%
TCCTGTTGGATTGAACTTCA+TGG + chr7.3:22480069-22480088 None:intergenic 40.0%
TGGATTGCAAGCTTTGCATT+TGG - chr7.3:22480618-22480637 MS.gene08162:CDS 40.0%
TGGGGATTGCAAGAACTTTA+TGG - chr7.3:22480142-22480161 MS.gene08162:CDS 40.0%
TTATGGGATATGCGTCAAAG+GGG - chr7.3:22480386-22480405 MS.gene08162:CDS 40.0%
TTGGTTCAAAGCCAATGGAA+TGG - chr7.3:22479931-22479950 MS.gene08162:CDS 40.0%
! AGAGCATGTTCATTTTCACC+AGG + chr7.3:22479903-22479922 None:intergenic 40.0%
! CGATGTGTGAAGATTTTGGA+AGG - chr7.3:22480668-22480687 MS.gene08162:CDS 40.0%
! TTGATGACCTTGAAGTGTCA+TGG + chr7.3:22480540-22480559 None:intergenic 40.0%
!! AGTTGTTGGTTCAAAGCCAA+TGG - chr7.3:22479926-22479945 MS.gene08162:CDS 40.0%
!! TTTCCTTTGGAATGTGCATG+GGG - chr7.3:22480124-22480143 MS.gene08162:CDS 40.0%
!!! CATCGATTTTGTGGAGCATA+TGG + chr7.3:22480653-22480672 None:intergenic 40.0%
AAGCTTGCAATCCATGCCAT+TGG + chr7.3:22480612-22480631 None:intergenic 45.0%
AATCCATGCCATTGGTGAGA+AGG + chr7.3:22480604-22480623 None:intergenic 45.0%
AATCCCCATGCACATTCCAA+AGG + chr7.3:22480130-22480149 None:intergenic 45.0%
AGAAGCTGACAGCAGTAATC+TGG + chr7.3:22480439-22480458 None:intergenic 45.0%
ATATACAGCACTCTGGTGAC+CGG + chr7.3:22480045-22480064 None:intergenic 45.0%
ATGGAAGCAAGGTTACAGCT+GGG - chr7.3:22480741-22480760 MS.gene08162:CDS 45.0%
CCAGCCCTGATAAAACACTT+AGG - chr7.3:22480234-22480253 MS.gene08162:CDS 45.0%
GAACATGCTCTGTCAGTTGT+TGG - chr7.3:22479912-22479931 MS.gene08162:CDS 45.0%
GAGGTTACCATGACACTTCA+AGG - chr7.3:22480530-22480549 MS.gene08162:CDS 45.0%
GATCTTCACTGGACTTCAGA+TGG - chr7.3:22480194-22480213 MS.gene08162:CDS 45.0%
GCCTCAGATAAGATCTACAC+TGG - chr7.3:22480464-22480483 MS.gene08162:CDS 45.0%
TATAAGCTACCTGGGCACAA+TGG - chr7.3:22480815-22480834 MS.gene08162:CDS 45.0%
TCTCCAATCATGTTGCTGAC+CGG - chr7.3:22480023-22480042 MS.gene08162:CDS 45.0%
TTAACAGATCCATTGTGCCC+AGG + chr7.3:22480827-22480846 None:intergenic 45.0%
! CCTAAGTGTTTTATCAGGGC+TGG + chr7.3:22480237-22480256 None:intergenic 45.0%
AAAGCAGCGGACCTCAAGTT+TGG - chr7.3:22479998-22480017 MS.gene08162:CDS 50.0%
ACAATGCTCCTCATGCTCCT+GGG - chr7.3:22479967-22479986 MS.gene08162:CDS 50.0%
ACAGGATCAGTCGTTGCATC+TGG - chr7.3:22480083-22480102 MS.gene08162:CDS 50.0%
ATGGGATTTGCGTAAAGGCG+AGG - chr7.3:22480511-22480530 MS.gene08162:CDS 50.0%
CATGCCATTGGTGAGAAGGT+AGG + chr7.3:22480600-22480619 None:intergenic 50.0%
CTACCTTCTCACCAATGGCA+TGG - chr7.3:22480598-22480617 MS.gene08162:CDS 50.0%
GATGCAACGACTGATCCTGT+TGG + chr7.3:22480083-22480102 None:intergenic 50.0%
GATGGAAGCAAGGTTACAGC+TGG - chr7.3:22480740-22480759 MS.gene08162:CDS 50.0%
GCTGTAACCTTGCTTCCATC+AGG + chr7.3:22480740-22480759 None:intergenic 50.0%
GGCACAGTAGACCATTCCAT+TGG + chr7.3:22479945-22479964 None:intergenic 50.0%
TACAATGCTCCTCATGCTCC+TGG - chr7.3:22479966-22479985 MS.gene08162:CDS 50.0%
TCAACAGTTGCTGTCCTTCC+CGG - chr7.3:22480315-22480334 MS.gene08162:CDS 50.0%
TCAGAGCCACTGACAACAAG+AGG + chr7.3:22480350-22480369 None:intergenic 50.0%
TGACCGGTCAGCAACATGAT+TGG + chr7.3:22480029-22480048 None:intergenic 50.0%
! AAATGTGGCTGGTCACCTGA+TGG - chr7.3:22480722-22480741 MS.gene08162:CDS 50.0%
! AGCTGGGAGTTCTGATCGAA+TGG - chr7.3:22480757-22480776 MS.gene08162:CDS 50.0%
!! GGAGCATGAGGAGCATTGTA+TGG + chr7.3:22479966-22479985 None:intergenic 50.0%
!! GTTGTCAGTGGCTCTGATGA+TGG - chr7.3:22480353-22480372 MS.gene08162:CDS 50.0%
CTGGGCCAAATGGAAAGCAG+CGG - chr7.3:22479985-22480004 MS.gene08162:CDS 55.0%
CTGGTCACCTGATGGAAGCA+AGG - chr7.3:22480730-22480749 MS.gene08162:CDS 55.0%
GAGCCACTGACAACAAGAGG+TGG + chr7.3:22480347-22480366 None:intergenic 55.0%
GGCTCCTACCTTCTCACCAA+TGG - chr7.3:22480593-22480612 MS.gene08162:CDS 55.0%
GTGAGAAGGTAGGAGCCATC+AGG + chr7.3:22480590-22480609 None:intergenic 55.0%
! GAGGTCCGCTGCTTTCCATT+TGG + chr7.3:22479993-22480012 None:intergenic 55.0%
ACAGTTGCTGTCCTTCCCGG+AGG - chr7.3:22480318-22480337 MS.gene08162:CDS 60.0%
AGTTGCTGTCCTTCCCGGAG+GGG - chr7.3:22480320-22480339 MS.gene08162:CDS 60.0%
CAGTTGCTGTCCTTCCCGGA+GGG - chr7.3:22480319-22480338 MS.gene08162:CDS 60.0%
CCTCATGCTCCTGGGCCAAA+TGG - chr7.3:22479975-22479994 MS.gene08162:CDS 60.0%
! CCATTTGGCCCAGGAGCATG+AGG + chr7.3:22479978-22479997 None:intergenic 60.0%
! CGCTGCTTTCCATTTGGCCC+AGG + chr7.3:22479987-22480006 None:intergenic 60.0%
! GGGCCACCTCTTGTTGTCAG+TGG - chr7.3:22480341-22480360 MS.gene08162:CDS 60.0%
AACAAGAGGTGGCCCCCTCC+GGG + chr7.3:22480336-22480355 None:intergenic 65.0%
CAACAAGAGGTGGCCCCCTC+CGG + chr7.3:22480337-22480356 None:intergenic 65.0%
GTTGCTGTCCTTCCCGGAGG+GGG - chr7.3:22480321-22480340 MS.gene08162:CDS 65.0%
AGAGGTGGCCCCCTCCGGGA+AGG + chr7.3:22480332-22480351 None:intergenic 75.0%


Chromosome Type Strat End Strand Name
chr7.3 gene 22479888 22480925 22479888 ID=MS.gene08162
chr7.3 mRNA 22479888 22480925 22479888 ID=MS.gene08162.t1;Parent=MS.gene08162
chr7.3 exon 22479888 22480925 22479888 ID=MS.gene08162.t1.exon1;Parent=MS.gene08162.t1
chr7.3 CDS 22479888 22480925 22479888 ID=cds.MS.gene08162.t1;Parent=MS.gene08162.t1
Gene Sequence

>MS.gene08162

ATGCAAGGTTTTCCTGGTGAAAATGAACATGCTCTGTCAGTTGTTGGTTCAAAGCCAATGGAATGGTCTACTGTGCCATACAATGCTCCTCATGCTCCTGGGCCAAATGGAAAGCAGCGGACCTCAAGTTTGGAATCTCCAATCATGTTGCTGACCGGTCACCAGAGTGCTGTATATACCATGAAGTTCAATCCAACAGGATCAGTCGTTGCATCTGGATCGCATGACAAAGAAATTTTCCTTTGGAATGTGCATGGGGATTGCAAGAACTTTATGGTTCTAAAAGGTCACAAGAATGCTGTTTTAGATCTTCACTGGACTTCAGATGGGACACAGATTATCTCTGCCAGCCCTGATAAAACACTTAGGTTATGGGATACAGAAACAGGAAAACAAATCAAAAAGATGGTAGAGCATCTCTCGTATGTCAACAGTTGCTGTCCTTCCCGGAGGGGGCCACCTCTTGTTGTCAGTGGCTCTGATGATGGAACAGCAAAATTATGGGATATGCGTCAAAGGGGCTCCATCCAAACATTTCCTGATAAATACCAGATTACTGCTGTCAGCTTCTCTGATGCCTCAGATAAGATCTACACTGGTGGTATTGATAATGATGTCAAGATATGGGATTTGCGTAAAGGCGAGGTTACCATGACACTTCAAGGTCATCAAGATATGATTACAAGTATGCAATTGAGTCCTGATGGCTCCTACCTTCTCACCAATGGCATGGATTGCAAGCTTTGCATTTGGGATATGCGCCCATATGCTCCACAAAATCGATGTGTGAAGATTTTGGAAGGGCATCAACACAACTTTGAGAAGAATTTGTTGAAATGTGGCTGGTCACCTGATGGAAGCAAGGTTACAGCTGGGAGTTCTGATCGAATGGTTTACATCTGGGATACCACTTCTCGAAGAATATTGTATAAGCTACCTGGGCACAATGGATCTGTTAATGAGTGTGTTTTCCATCCCAATGAACCTATTGTTGGATCATGTAGCAGTGACAAGCAGATTTATCTTGGGGAGATATGA

Protein sequence

>MS.gene08162.t1

MQGFPGENEHALSVVGSKPMEWSTVPYNAPHAPGPNGKQRTSSLESPIMLLTGHQSAVYTMKFNPTGSVVASGSHDKEIFLWNVHGDCKNFMVLKGHKNAVLDLHWTSDGTQIISASPDKTLRLWDTETGKQIKKMVEHLSYVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGSIQTFPDKYQITAVSFSDASDKIYTGGIDNDVKIWDLRKGEVTMTLQGHQDMITSMQLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPDGSKVTAGSSDRMVYIWDTTSRRILYKLPGHNGSVNECVFHPNEPIVGSCSSDKQIYLGEI