Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene010090.t1 | AES98260.2 | 96.5 | 985 | 32 | 1 | 1 | 983 | 1 | 985 | 0.00E+00 | 1712.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene010090.t1 | P0DMS1 | 44.8 | 1018 | 432 | 23 | 1 | 969 | 1 | 937 | 7.4e-202 | 705.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene010090.t1 | G7KBM5 | 96.5 | 985 | 32 | 1 | 1 | 983 | 1 | 985 | 0.0e+00 | 1712.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene070686 | MS.gene010090 | PPI |
| MS.gene048346 | MS.gene010090 | PPI |
| MS.gene008915 | MS.gene010090 | PPI |
| MS.gene069111 | MS.gene010090 | PPI |
| MS.gene065209 | MS.gene010090 | PPI |
| MS.gene046432 | MS.gene010090 | PPI |
| MS.gene027791 | MS.gene010090 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene010090.t1 | MTR_5g066340 | 96.751 | 985 | 30 | 1 | 1 | 983 | 1 | 985 | 0.0 | 1962 |
| MS.gene010090.t1 | MTR_3g100190 | 56.853 | 985 | 358 | 23 | 21 | 978 | 16 | 960 | 0.0 | 996 |
| MS.gene010090.t1 | MTR_5g032060 | 50.980 | 459 | 217 | 3 | 1 | 459 | 1 | 451 | 9.54e-135 | 434 |
| MS.gene010090.t1 | MTR_5g032060 | 38.497 | 439 | 203 | 13 | 537 | 967 | 762 | 1141 | 1.42e-78 | 279 |
| MS.gene010090.t1 | MTR_8g471130 | 39.678 | 373 | 162 | 11 | 590 | 958 | 666 | 979 | 5.16e-64 | 234 |
| MS.gene010090.t1 | MTR_1g103160 | 33.455 | 275 | 155 | 7 | 1 | 264 | 4 | 261 | 8.90e-35 | 145 |
| MS.gene010090.t1 | MTR_1g103160 | 33.455 | 275 | 155 | 7 | 1 | 264 | 1 | 258 | 9.05e-35 | 145 |
| MS.gene010090.t1 | MTR_1g071540 | 56.311 | 103 | 45 | 0 | 10 | 112 | 15 | 117 | 6.87e-34 | 142 |
| MS.gene010090.t1 | MTR_7g095410 | 56.311 | 103 | 45 | 0 | 10 | 112 | 13 | 115 | 7.03e-33 | 139 |
| MS.gene010090.t1 | MTR_7g095410 | 56.311 | 103 | 45 | 0 | 10 | 112 | 13 | 115 | 7.25e-33 | 139 |
| MS.gene010090.t1 | MTR_5g006520 | 29.478 | 268 | 145 | 4 | 10 | 269 | 13 | 244 | 4.83e-31 | 132 |
| MS.gene010090.t1 | MTR_5g006520 | 29.478 | 268 | 145 | 4 | 10 | 269 | 13 | 244 | 9.45e-31 | 132 |
| MS.gene010090.t1 | MTR_5g075490 | 44.186 | 129 | 59 | 3 | 9 | 135 | 20 | 137 | 1.47e-25 | 113 |
| MS.gene010090.t1 | MTR_1g103160 | 30.864 | 243 | 140 | 7 | 33 | 264 | 1 | 226 | 1.81e-22 | 105 |
| MS.gene010090.t1 | MTR_7g095410 | 53.750 | 80 | 37 | 0 | 33 | 112 | 1 | 80 | 3.77e-21 | 100 |
| MS.gene010090.t1 | MTR_7g108070 | 49.367 | 79 | 37 | 2 | 11 | 86 | 10 | 88 | 5.21e-19 | 89.4 |
| MS.gene010090.t1 | MTR_1g088965 | 36.364 | 121 | 72 | 2 | 2 | 119 | 8 | 126 | 3.63e-17 | 86.3 |
| MS.gene010090.t1 | MTR_3g467610 | 42.353 | 85 | 39 | 1 | 33 | 107 | 15 | 99 | 1.87e-14 | 77.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene010090.t1 | AT1G58215 | 45.972 | 1018 | 420 | 24 | 1 | 969 | 1 | 937 | 0.0 | 790 |
| MS.gene010090.t1 | AT1G09720 | 44.366 | 994 | 447 | 24 | 1 | 969 | 1 | 913 | 0.0 | 714 |
| MS.gene010090.t1 | AT2G22560 | 39.476 | 1031 | 471 | 22 | 1 | 967 | 1 | 942 | 0.0 | 655 |
| MS.gene010090.t1 | AT5G10500 | 40.284 | 633 | 308 | 14 | 1 | 614 | 1 | 582 | 1.83e-122 | 394 |
| MS.gene010090.t1 | AT5G10500 | 39.256 | 242 | 127 | 5 | 726 | 966 | 619 | 841 | 1.16e-41 | 165 |
| MS.gene010090.t1 | AT3G22790 | 33.033 | 333 | 185 | 11 | 1 | 322 | 4 | 309 | 2.89e-36 | 149 |
| MS.gene010090.t1 | AT3G22790 | 33.033 | 333 | 185 | 11 | 1 | 322 | 4 | 309 | 2.89e-36 | 149 |
| MS.gene010090.t1 | AT3G22790 | 33.033 | 333 | 185 | 11 | 1 | 322 | 4 | 309 | 2.89e-36 | 149 |
| MS.gene010090.t1 | AT4G14760 | 33.206 | 262 | 136 | 5 | 3 | 264 | 6 | 228 | 5.24e-34 | 142 |
| MS.gene010090.t1 | AT4G14760 | 33.206 | 262 | 136 | 5 | 3 | 264 | 6 | 228 | 5.24e-34 | 142 |
| MS.gene010090.t1 | AT4G14760 | 33.206 | 262 | 136 | 5 | 3 | 264 | 6 | 228 | 5.24e-34 | 142 |
| MS.gene010090.t1 | AT4G14760 | 33.206 | 262 | 136 | 5 | 3 | 264 | 6 | 228 | 5.24e-34 | 142 |
| MS.gene010090.t1 | AT1G03080 | 47.368 | 133 | 69 | 1 | 7 | 138 | 9 | 141 | 1.58e-33 | 140 |
| MS.gene010090.t1 | AT1G03080 | 47.368 | 133 | 69 | 1 | 7 | 138 | 9 | 141 | 1.58e-33 | 140 |
| MS.gene010090.t1 | AT1G03080 | 47.368 | 133 | 69 | 1 | 7 | 138 | 9 | 141 | 1.58e-33 | 140 |
| MS.gene010090.t1 | AT4G02710 | 32.877 | 292 | 149 | 9 | 5 | 264 | 5 | 281 | 1.00e-32 | 137 |
| MS.gene010090.t1 | AT2G30500 | 51.807 | 83 | 40 | 0 | 9 | 91 | 20 | 102 | 2.91e-23 | 105 |
| MS.gene010090.t1 | AT2G30500 | 51.807 | 83 | 40 | 0 | 9 | 91 | 20 | 102 | 2.91e-23 | 105 |
| MS.gene010090.t1 | AT2G30500 | 51.807 | 83 | 40 | 0 | 9 | 91 | 19 | 101 | 2.97e-23 | 105 |
| MS.gene010090.t1 | AT5G58320 | 46.988 | 83 | 44 | 0 | 12 | 94 | 23 | 105 | 1.91e-20 | 96.7 |
| MS.gene010090.t1 | AT5G58320 | 46.988 | 83 | 44 | 0 | 12 | 94 | 23 | 105 | 1.91e-20 | 96.7 |
| MS.gene010090.t1 | AT5G58320 | 46.988 | 83 | 44 | 0 | 12 | 94 | 23 | 105 | 2.14e-20 | 97.1 |
| MS.gene010090.t1 | AT5G58320 | 46.988 | 83 | 44 | 0 | 12 | 94 | 23 | 105 | 2.14e-20 | 97.1 |
| MS.gene010090.t1 | AT1G03470 | 52.632 | 76 | 35 | 1 | 12 | 86 | 8 | 83 | 1.01e-19 | 90.9 |
| MS.gene010090.t1 | AT1G03470 | 52.632 | 76 | 35 | 1 | 12 | 86 | 8 | 83 | 1.01e-19 | 90.9 |
| MS.gene010090.t1 | AT1G03470 | 52.632 | 76 | 35 | 1 | 12 | 86 | 8 | 83 | 1.01e-19 | 90.9 |
| MS.gene010090.t1 | AT1G03470 | 52.632 | 76 | 35 | 1 | 12 | 86 | 8 | 83 | 1.01e-19 | 90.9 |
| MS.gene010090.t1 | AT2G47920 | 48.000 | 75 | 39 | 0 | 12 | 86 | 11 | 85 | 7.80e-19 | 87.0 |
| MS.gene010090.t1 | AT2G47920 | 48.000 | 75 | 39 | 0 | 12 | 86 | 11 | 85 | 7.80e-19 | 87.0 |
| MS.gene010090.t1 | AT5G58320 | 43.548 | 62 | 35 | 0 | 33 | 94 | 1 | 62 | 6.06e-11 | 66.2 |
Find 113 sgRNAs with CRISPR-Local
Find 199 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAATCTTTCTTTGGAACTTT+TGG | 0.165763 | 5.2:-56274595 | None:intergenic |
| CAAACTTCAGAAGGATATTT+TGG | 0.174256 | 5.2:+56274738 | MS.gene010090:CDS |
| TGTAATATTGAGCATTTATC+TGG | 0.213401 | 5.2:+56275540 | MS.gene010090:CDS |
| GATGAACTTGATCAAGATAT+TGG | 0.225836 | 5.2:+56277480 | MS.gene010090:CDS |
| GGACTTCGAAAATCTTTCTT+TGG | 0.230243 | 5.2:-56274604 | None:intergenic |
| CAAATTTGCTCTCTCTCTAT+TGG | 0.234019 | 5.2:-56277675 | None:intergenic |
| CGACGATGCTAGAGCTTTAA+TGG | 0.236758 | 5.2:+56274906 | MS.gene010090:CDS |
| TAAGGCTCTATATGCTTTAA+AGG | 0.251382 | 5.2:-56274398 | None:intergenic |
| CAGAAATGTATTACAGAAAA+AGG | 0.258144 | 5.2:+56274347 | MS.gene010090:CDS |
| ATCGATTAACCATACCGTTT+TGG | 0.270773 | 5.2:-56275323 | None:intergenic |
| TCAAACAAATATAAAGAAAT+TGG | 0.271471 | 5.2:+56275368 | MS.gene010090:CDS |
| TGAGAAACTATAAAGATGTT+AGG | 0.274715 | 5.2:+56275976 | MS.gene010090:CDS |
| TGATAAAGAGATAGCTAGTT+TGG | 0.295625 | 5.2:+56275149 | MS.gene010090:CDS |
| TATTCTGTGGTTGTTGTGTA+TGG | 0.298293 | 5.2:-56276718 | None:intergenic |
| CCTTTGAGGTCTTTCTTGTT+TGG | 0.305580 | 5.2:+56277555 | MS.gene010090:CDS |
| GTGAGGGTGATCAGCCTAAT+TGG | 0.310323 | 5.2:+56275886 | MS.gene010090:CDS |
| CTTTCATCTGGATTTGTGTC+TGG | 0.324484 | 5.2:-56276694 | None:intergenic |
| CTCACCTATTGCTTCTACTT+TGG | 0.326555 | 5.2:-56274710 | None:intergenic |
| TGCAGTTTGCAAGATGAATT+TGG | 0.326594 | 5.2:+56274862 | MS.gene010090:CDS |
| ATGAACTTGATCAAGATATT+GGG | 0.344497 | 5.2:+56277481 | MS.gene010090:CDS |
| TGTGAATAAAGTTGTTACTT+TGG | 0.372342 | 5.2:+56275284 | MS.gene010090:CDS |
| TGAGCTTCTCAAGGGTTCTA+AGG | 0.372530 | 5.2:-56276885 | None:intergenic |
| ATATGGTGTGGAACTTGATC+AGG | 0.373851 | 5.2:-56274487 | None:intergenic |
| TGCATTTGGTTGTTGAAGTC+AGG | 0.375894 | 5.2:-56274559 | None:intergenic |
| TTAGGACAAAACAATCAAAA+TGG | 0.380769 | 5.2:+56273721 | MS.gene010090:CDS |
| GTTGTGTATGGACTTTCATC+TGG | 0.387712 | 5.2:-56276706 | None:intergenic |
| AATAATAATAATGCAGAATC+TGG | 0.387966 | 5.2:+56277288 | MS.gene010090:CDS |
| TCGAGGAAAATCTCGAGTTT+TGG | 0.388680 | 5.2:+56276980 | MS.gene010090:CDS |
| AACTGAATTATCACTTTGGC+TGG | 0.398480 | 5.2:+56277182 | MS.gene010090:CDS |
| TATCCTGCATGTTGGATCCT+TGG | 0.401908 | 5.2:-56276780 | None:intergenic |
| TGCTCTCTCTCTATTGGAGC+TGG | 0.402479 | 5.2:-56277669 | None:intergenic |
| AGACAAGCGGCAAAACCTTT+CGG | 0.408126 | 5.2:+56276918 | MS.gene010090:CDS |
| TGATAAATGATCATATCTTT+CGG | 0.418812 | 5.2:-56274422 | None:intergenic |
| GGAACACAATGCAGTGTTGC+AGG | 0.421621 | 5.2:+56277203 | MS.gene010090:CDS |
| TATCAAGTTGCAAAATTTCA+AGG | 0.421926 | 5.2:+56277354 | MS.gene010090:CDS |
| GGTGGTGGGCCAGCCACATT+AGG | 0.422246 | 5.2:+56273703 | MS.gene010090:CDS |
| CACTCTTACTGTGACTGAAA+TGG | 0.422481 | 5.2:+56275242 | MS.gene010090:CDS |
| CATCGTCGTCGTCATCAATA+TGG | 0.424350 | 5.2:-56274504 | None:intergenic |
| GAGAAACTATAAAGATGTTA+GGG | 0.426679 | 5.2:+56275977 | MS.gene010090:CDS |
| AGCAGAACTAAAGACGATAA+AGG | 0.430205 | 5.2:+56277065 | MS.gene010090:CDS |
| CTTACCAAAGTAGAAGCAAT+AGG | 0.443234 | 5.2:+56274706 | MS.gene010090:CDS |
| TTTAGAATGCGGATGTCCTT+CGG | 0.445020 | 5.2:-56277100 | None:intergenic |
| GAAATCGAAGATCAGATAAC+AGG | 0.446870 | 5.2:+56274823 | MS.gene010090:CDS |
| AAAGTTTCAAAACTCAATAC+AGG | 0.450258 | 5.2:+56277035 | MS.gene010090:CDS |
| TATATTTGTTTGAAGTTCAT+CGG | 0.452191 | 5.2:-56275358 | None:intergenic |
| AGATCTGATCCTGGAGTTGT+TGG | 0.459325 | 5.2:-56274685 | None:intergenic |
| AGCGCGCATATGAAAAGTAT+TGG | 0.464414 | 5.2:+56274800 | MS.gene010090:CDS |
| AAAGATGCTGTGATAATAAG+TGG | 0.466838 | 5.2:+56277330 | MS.gene010090:CDS |
| GCGCGCATATGAAAAGTATT+GGG | 0.469606 | 5.2:+56274801 | MS.gene010090:CDS |
| AAAATTTAAAATGTTGCAAA+GGG | 0.473458 | 5.2:+56273659 | None:intergenic |
| CTAAGAGTCTTACAAAATGA+TGG | 0.474682 | 5.2:+56274304 | MS.gene010090:CDS |
| CACAAGCTCATCAATACATT+CGG | 0.475771 | 5.2:-56275265 | None:intergenic |
| GGTCAGCCATGAGCTTCTCA+AGG | 0.481788 | 5.2:-56276894 | None:intergenic |
| TCTACAAATTCAACAAGCTC+AGG | 0.483768 | 5.2:-56274370 | None:intergenic |
| GACAAAACAATCAAAATGGT+TGG | 0.491751 | 5.2:+56273725 | MS.gene010090:CDS |
| AAATATATTCCAACAACTCC+AGG | 0.494269 | 5.2:+56274676 | MS.gene010090:CDS |
| GGCCGAAGTTGAGATTGTAT+AGG | 0.501384 | 5.2:-56277132 | None:intergenic |
| GACAAAGAAATGCTTATAGC+AGG | 0.504424 | 5.2:+56275396 | MS.gene010090:CDS |
| CAGCAAGTAATGCATATTCA+TGG | 0.510883 | 5.2:+56273682 | MS.gene010090:CDS |
| ACCGCGGTGTCTTCCCAAAA+CGG | 0.512093 | 5.2:+56275309 | MS.gene010090:CDS |
| TAGAGAGAAAATTCTGTTGG+AGG | 0.517147 | 5.2:+56275938 | MS.gene010090:CDS |
| CAAGATGAAATTGCAAGAGC+AGG | 0.519849 | 5.2:+56277264 | MS.gene010090:CDS |
| ATCAAGATTGCTCATTGTAT+CGG | 0.526400 | 5.2:-56275838 | None:intergenic |
| TGATAGAGAGAAAATTCTGT+TGG | 0.526914 | 5.2:+56275935 | MS.gene010090:CDS |
| TTAGAACTGAATTATCACTT+TGG | 0.531424 | 5.2:+56277178 | MS.gene010090:CDS |
| ATGATCATATCTTTCGGCTA+AGG | 0.534484 | 5.2:-56274416 | None:intergenic |
| GTAATGCATATTCATGGTGG+TGG | 0.537310 | 5.2:+56273688 | MS.gene010090:CDS |
| TGTTGATGATCTTGCTATGA+AGG | 0.540148 | 5.2:+56275662 | MS.gene010090:CDS |
| GTCAGCCATGAGCTTCTCAA+GGG | 0.543672 | 5.2:-56276893 | None:intergenic |
| AAATGATGATGCTGTAAATG+TGG | 0.552132 | 5.2:+56275728 | MS.gene010090:CDS |
| ACTTTGGTAAGATCTGATCC+TGG | 0.553428 | 5.2:-56274694 | None:intergenic |
| TGTAGATGATTCTGTAATGA+AGG | 0.555227 | 5.2:+56275638 | MS.gene010090:CDS |
| TCGATGTTGCTATCCCGAAA+AGG | 0.556008 | 5.2:+56274628 | MS.gene010090:CDS |
| GAAGGATGTTAATACAAAAG+AGG | 0.556152 | 5.2:+56275704 | MS.gene010090:CDS |
| GAAGAATGCTCTTGTGACAA+AGG | 0.557429 | 5.2:+56276633 | MS.gene010090:CDS |
| TGTTAATGATTCTGCTACGA+AGG | 0.558641 | 5.2:+56275686 | MS.gene010090:CDS |
| GAAGCTAAAAGAATTTGAAG+AGG | 0.559023 | 5.2:+56275437 | MS.gene010090:CDS |
| TGGTTGTTGAAGTCAGGAGA+TGG | 0.559993 | 5.2:-56274553 | None:intergenic |
| TTGCAAGATGAATTTGGTGT+CGG | 0.561480 | 5.2:+56274868 | MS.gene010090:CDS |
| AAATATAAAGAAATTGGAAG+AGG | 0.563386 | 5.2:+56275374 | MS.gene010090:CDS |
| AAGGTAATAGAATACCTTTG+AGG | 0.567397 | 5.2:+56277541 | MS.gene010090:CDS |
| GGTGTCTTCCCAAAACGGTA+TGG | 0.575098 | 5.2:+56275314 | MS.gene010090:CDS |
| AATTATGCTCTTACATGTGT+CGG | 0.578796 | 5.2:-56275106 | None:intergenic |
| AACCTATACAATCTCAACTT+CGG | 0.583451 | 5.2:+56277130 | MS.gene010090:CDS |
| AATATCAGTATCCTGCATGT+TGG | 0.585085 | 5.2:-56276788 | None:intergenic |
| TGAGATCGACAAACTTCAGA+AGG | 0.592393 | 5.2:+56274729 | MS.gene010090:CDS |
| GTTGCAAGTGAGTTACAAGC+TGG | 0.597008 | 5.2:+56277411 | MS.gene010090:CDS |
| AGGCCAAGGATCCAACATGC+AGG | 0.608470 | 5.2:+56276777 | MS.gene010090:CDS |
| TAGAACCCTTGAGAAGCTCA+TGG | 0.608877 | 5.2:+56276888 | MS.gene010090:CDS |
| TTTCCTCGAGGAGGTCGTCG+AGG | 0.609070 | 5.2:-56276966 | None:intergenic |
| TAGAGCTTTAATGGCAGCAA+CGG | 0.609555 | 5.2:+56274915 | MS.gene010090:CDS |
| TAATGCATATTCATGGTGGT+GGG | 0.616676 | 5.2:+56273689 | MS.gene010090:CDS |
| TGGTGTATACTTGTATTCTG+TGG | 0.618446 | 5.2:-56276731 | None:intergenic |
| CATGAAAACTCATCAGCCGT+TGG | 0.621750 | 5.2:+56276862 | MS.gene010090:CDS |
| TGGTTGGATCAATGTCTCCA+AGG | 0.623539 | 5.2:+56273741 | MS.gene010090:CDS |
| GCTGGTCTTAGTCTTGTGAA+AGG | 0.626712 | 5.2:+56277429 | MS.gene010090:CDS |
| AATAATAATGCAGAATCTGG+TGG | 0.627026 | 5.2:+56277291 | MS.gene010090:CDS |
| AGGGTGATCAGCCTAATTGG+AGG | 0.627112 | 5.2:+56275889 | MS.gene010090:CDS |
| TATGGTGTGGAACTTGATCA+GGG | 0.627550 | 5.2:-56274486 | None:intergenic |
| GGAGGTCGTCGAGGTCTGAA+CGG | 0.634081 | 5.2:-56276957 | None:intergenic |
| AAGGAAAACAACAAATCCGA+AGG | 0.636916 | 5.2:+56277084 | MS.gene010090:CDS |
| CTCAAGGGTTCTAAGGCCAA+CGG | 0.637618 | 5.2:-56276878 | None:intergenic |
| TCGTCGTCATCAATATGGTG+TGG | 0.638456 | 5.2:-56274499 | None:intergenic |
| GACGATGAAGAAAGTGACAC+AGG | 0.645541 | 5.2:+56274520 | MS.gene010090:CDS |
| TTTCGGGATAGCAACATCGA+AGG | 0.650547 | 5.2:-56274625 | None:intergenic |
| AGACCTCGACGACCTCCTCG+AGG | 0.661463 | 5.2:+56276963 | MS.gene010090:CDS |
| GAATAATATGAAACATGATG+TGG | 0.665102 | 5.2:+56275569 | MS.gene010090:CDS |
| CCAAACAAGAAAGACCTCAA+AGG | 0.666288 | 5.2:-56277555 | None:intergenic |
| TCATGGCTGACCAAGACAAG+CGG | 0.671017 | 5.2:+56276905 | MS.gene010090:CDS |
| AGTTGTTACTTTGGAAACCG+CGG | 0.672090 | 5.2:+56275293 | MS.gene010090:CDS |
| GGTTGATGATGTTTAGAATG+CGG | 0.680388 | 5.2:-56277111 | None:intergenic |
| GTGTTGCAGGATGAACTACA+AGG | 0.695061 | 5.2:+56277216 | MS.gene010090:CDS |
| CAAGTAATGCATATTCATGG+TGG | 0.697052 | 5.2:+56273685 | MS.gene010090:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTAAATCAGAAAATAAA+CGG | + | chr5.2:56276670-56276689 | MS.gene010090:CDS | 10.0% |
| !! | AGAAAAGATTAAAGAAAAAT+TGG | + | chr5.2:56275203-56275222 | MS.gene010090:CDS | 15.0% |
| !! | TCAAACAAATATAAAGAAAT+TGG | + | chr5.2:56275368-56275387 | MS.gene010090:CDS | 15.0% |
| !! | TCCAAAATAATGATAATATA+TGG | - | chr5.2:56276090-56276109 | None:intergenic | 15.0% |
| !!! | ACCATATATTATCATTATTT+TGG | + | chr5.2:56276086-56276105 | MS.gene010090:intron | 15.0% |
| !!! | ATACTAATTTTATTACTGAA+AGG | + | chr5.2:56275778-56275797 | MS.gene010090:CDS | 15.0% |
| !!! | TATTATCATTATTTTGGATT+TGG | + | chr5.2:56276092-56276111 | MS.gene010090:intron | 15.0% |
| !! | AAATATAAAGAAATTGGAAG+AGG | + | chr5.2:56275374-56275393 | MS.gene010090:CDS | 20.0% |
| !! | AATAATAATAATGCAGAATC+TGG | + | chr5.2:56277288-56277307 | MS.gene010090:CDS | 20.0% |
| !! | ATGATGTTGAAAAGAAAAAT+AGG | + | chr5.2:56276009-56276028 | MS.gene010090:CDS | 20.0% |
| !! | CGAACAAAAATAAAATTAGT+TGG | - | chr5.2:56276597-56276616 | None:intergenic | 20.0% |
| !! | CTCAGATATACTAAAATAAT+GGG | - | chr5.2:56276250-56276269 | None:intergenic | 20.0% |
| !! | TATGTTTCTTAAACTATTAC+TGG | - | chr5.2:56276545-56276564 | None:intergenic | 20.0% |
| !! | TCTCAGATATACTAAAATAA+TGG | - | chr5.2:56276251-56276270 | None:intergenic | 20.0% |
| !! | TGATAAATGATCATATCTTT+CGG | - | chr5.2:56274425-56274444 | None:intergenic | 20.0% |
| !! | TGATGTTGAAAAGAAAAATA+GGG | + | chr5.2:56276010-56276029 | MS.gene010090:CDS | 20.0% |
| !!! | ACAAAATATACATGTTTTGA+TGG | - | chr5.2:56273849-56273868 | None:intergenic | 20.0% |
| !!! | AGATTTTATTATTAGCAGAA+TGG | + | chr5.2:56276386-56276405 | MS.gene010090:intron | 20.0% |
| !!! | TATACTAAAATAATGGGATT+TGG | - | chr5.2:56276244-56276263 | None:intergenic | 20.0% |
| !!! | TATATTTGTTTGAAGTTCAT+CGG | - | chr5.2:56275361-56275380 | None:intergenic | 20.0% |
| !!! | TCAAAACATGTATATTTTGT+TGG | + | chr5.2:56273849-56273868 | MS.gene010090:intron | 20.0% |
| !!! | TTATTTTAGTATATCTGAGA+TGG | + | chr5.2:56276251-56276270 | MS.gene010090:intron | 20.0% |
| !!! | TTGAATTTTGAACTATTTTG+AGG | - | chr5.2:56276434-56276453 | None:intergenic | 20.0% |
| ! | AAAGTTTCAAAACTCAATAC+AGG | + | chr5.2:56277035-56277054 | MS.gene010090:CDS | 25.0% |
| ! | AAATCCAGATTCATAATATG+AGG | - | chr5.2:56273800-56273819 | None:intergenic | 25.0% |
| ! | AACTTCAACTATAAGAAACA+TGG | - | chr5.2:56274198-56274217 | None:intergenic | 25.0% |
| ! | ACATTCAAACTAAACAGATA+TGG | + | chr5.2:56274261-56274280 | MS.gene010090:intron | 25.0% |
| ! | ACTGAAAGGATTGAAAAAAT+GGG | + | chr5.2:56275792-56275811 | MS.gene010090:CDS | 25.0% |
| ! | ATATACTAAGAAACATACCT+TGG | - | chr5.2:56273761-56273780 | None:intergenic | 25.0% |
| ! | ATGAACTTGATCAAGATATT+GGG | + | chr5.2:56277481-56277500 | MS.gene010090:CDS | 25.0% |
| ! | CAGAAATGTATTACAGAAAA+AGG | + | chr5.2:56274347-56274366 | MS.gene010090:CDS | 25.0% |
| ! | GAATAATATGAAACATGATG+TGG | + | chr5.2:56275569-56275588 | MS.gene010090:CDS | 25.0% |
| ! | GAGAAACTATAAAGATGTTA+GGG | + | chr5.2:56275977-56275996 | MS.gene010090:CDS | 25.0% |
| ! | TACTGAAAGGATTGAAAAAA+TGG | + | chr5.2:56275791-56275810 | MS.gene010090:CDS | 25.0% |
| ! | TATTACTGGTATTTACATGT+CGG | - | chr5.2:56276531-56276550 | None:intergenic | 25.0% |
| ! | TCTCTTAAATGACGAAAAAT+CGG | - | chr5.2:56277156-56277175 | None:intergenic | 25.0% |
| ! | TGAGAAACTATAAAGATGTT+AGG | + | chr5.2:56275976-56275995 | MS.gene010090:CDS | 25.0% |
| ! | TGTAATATTGAGCATTTATC+TGG | + | chr5.2:56275540-56275559 | MS.gene010090:CDS | 25.0% |
| ! | TTAGAACTGAATTATCACTT+TGG | + | chr5.2:56277178-56277197 | MS.gene010090:CDS | 25.0% |
| ! | TTAGGACAAAACAATCAAAA+TGG | + | chr5.2:56273721-56273740 | MS.gene010090:CDS | 25.0% |
| ! | TTGTTTGAATATCTACACAT+AGG | + | chr5.2:56276303-56276322 | MS.gene010090:intron | 25.0% |
| ! | TTTGATGGAAATAATGATGT+TGG | - | chr5.2:56273834-56273853 | None:intergenic | 25.0% |
| !! | ATCATTTTGTAAGACTCTTA+GGG | - | chr5.2:56274305-56274324 | None:intergenic | 25.0% |
| !! | ATTTCTTTTCTAAATCCGAA+AGG | - | chr5.2:56276936-56276955 | None:intergenic | 25.0% |
| !! | TATCAAGTTGCAAAATTTCA+AGG | + | chr5.2:56277354-56277373 | MS.gene010090:CDS | 25.0% |
| !! | TGTGAATAAAGTTGTTACTT+TGG | + | chr5.2:56275284-56275303 | MS.gene010090:CDS | 25.0% |
| !! | TTTTCCAGATTATTTAGTTG+AGG | - | chr5.2:56273924-56273943 | None:intergenic | 25.0% |
| !! | TTTTCCTCAACTAAATAATC+TGG | + | chr5.2:56273917-56273936 | MS.gene010090:intron | 25.0% |
| !!! | AAATCTTTCTTTGGAACTTT+TGG | - | chr5.2:56274598-56274617 | None:intergenic | 25.0% |
| !!! | TCATTATTTTGGATTTGGAT+TGG | + | chr5.2:56276097-56276116 | MS.gene010090:intron | 25.0% |
| AAAGATGCTGTGATAATAAG+TGG | + | chr5.2:56277330-56277349 | MS.gene010090:CDS | 30.0% | |
| AAATATATTCCAACAACTCC+AGG | + | chr5.2:56274676-56274695 | MS.gene010090:CDS | 30.0% | |
| AACCTATACAATCTCAACTT+CGG | + | chr5.2:56277130-56277149 | MS.gene010090:CDS | 30.0% | |
| AAGGTAATAGAATACCTTTG+AGG | + | chr5.2:56277541-56277560 | MS.gene010090:CDS | 30.0% | |
| AATAATAATGCAGAATCTGG+TGG | + | chr5.2:56277291-56277310 | MS.gene010090:CDS | 30.0% | |
| AATTATGCTCTTACATGTGT+CGG | - | chr5.2:56275109-56275128 | None:intergenic | 30.0% | |
| AATTGTTTGCCATCTTTGAA+TGG | - | chr5.2:56273964-56273983 | None:intergenic | 30.0% | |
| ATCAAGATTGCTCATTGTAT+CGG | - | chr5.2:56275841-56275860 | None:intergenic | 30.0% | |
| CAATAGAACAATGAGAATGT+TGG | - | chr5.2:56273897-56273916 | None:intergenic | 30.0% | |
| CTAAGAGTCTTACAAAATGA+TGG | + | chr5.2:56274304-56274323 | MS.gene010090:CDS | 30.0% | |
| GAAAAAGAAGTTCTCTTAGT+TGG | - | chr5.2:56274655-56274674 | None:intergenic | 30.0% | |
| GAAAAATTGGAACAAGATTC+TGG | + | chr5.2:56275216-56275235 | MS.gene010090:CDS | 30.0% | |
| GAAGCTAAAAGAATTTGAAG+AGG | + | chr5.2:56275437-56275456 | MS.gene010090:CDS | 30.0% | |
| GAAGGATGTTAATACAAAAG+AGG | + | chr5.2:56275704-56275723 | MS.gene010090:CDS | 30.0% | |
| GACAAAACAATCAAAATGGT+TGG | + | chr5.2:56273725-56273744 | MS.gene010090:CDS | 30.0% | |
| GACACAAAAAAGAACACAAA+AGG | + | chr5.2:56277522-56277541 | MS.gene010090:CDS | 30.0% | |
| GATGAACTTGATCAAGATAT+TGG | + | chr5.2:56277480-56277499 | MS.gene010090:CDS | 30.0% | |
| GATTTAGTCAGTTAGTACAT+CGG | + | chr5.2:56276119-56276138 | MS.gene010090:intron | 30.0% | |
| GTCATTCTTAAATCACCAAA+TGG | - | chr5.2:56273875-56273894 | None:intergenic | 30.0% | |
| TAAGGCTCTATATGCTTTAA+AGG | - | chr5.2:56274401-56274420 | None:intergenic | 30.0% | |
| TACCAATGAGTTACAGAAAA+AGG | - | chr5.2:56274237-56274256 | None:intergenic | 30.0% | |
| TGATAAAGAGATAGCTAGTT+TGG | + | chr5.2:56275149-56275168 | MS.gene010090:CDS | 30.0% | |
| TGATAGAGAGAAAATTCTGT+TGG | + | chr5.2:56275935-56275954 | MS.gene010090:CDS | 30.0% | |
| TGTAGATGATTCTGTAATGA+AGG | + | chr5.2:56275638-56275657 | MS.gene010090:CDS | 30.0% | |
| TGTTCCTCATATTATGAATC+TGG | + | chr5.2:56273793-56273812 | MS.gene010090:intron | 30.0% | |
| TTTGTTGATCCATTCAAAGA+TGG | + | chr5.2:56273952-56273971 | MS.gene010090:intron | 30.0% | |
| ! | AAATGATGATGCTGTAAATG+TGG | + | chr5.2:56275728-56275747 | MS.gene010090:CDS | 30.0% |
| ! | ACACTTTCTATCTGAAGTAT+TGG | - | chr5.2:56274007-56274026 | None:intergenic | 30.0% |
| ! | AGTATATCTGAGATGGAAAT+TGG | + | chr5.2:56276258-56276277 | MS.gene010090:intron | 30.0% |
| ! | CAAACTTCAGAAGGATATTT+TGG | + | chr5.2:56274738-56274757 | MS.gene010090:CDS | 30.0% |
| ! | CATCATTTTGTAAGACTCTT+AGG | - | chr5.2:56274306-56274325 | None:intergenic | 30.0% |
| ! | TGTATATTTTGTTGGCCATT+TGG | + | chr5.2:56273857-56273876 | MS.gene010090:intron | 30.0% |
| ! | TGTTTTATGAATGTCGTGTA+TGG | + | chr5.2:56274169-56274188 | MS.gene010090:intron | 30.0% |
| !! | CTATTTTGTTTAGACAGTGT+AGG | - | chr5.2:56277633-56277652 | None:intergenic | 30.0% |
| !! | GAAGCACTTTTTAGAAAATC+AGG | + | chr5.2:56276757-56276776 | MS.gene010090:CDS | 30.0% |
| !! | TTGATTGTTTTGTCCTAATG+TGG | - | chr5.2:56273719-56273738 | None:intergenic | 30.0% |
| !! | TTTCTAAAAAGTGCTTCATG+TGG | - | chr5.2:56276754-56276773 | None:intergenic | 30.0% |
| AAAAACATCTGCCTCCAATT+AGG | - | chr5.2:56275903-56275922 | None:intergenic | 35.0% | |
| AAAAATGGGACAACACGATA+AGG | + | chr5.2:56275806-56275825 | MS.gene010090:CDS | 35.0% | |
| AACTGAATTATCACTTTGGC+TGG | + | chr5.2:56277182-56277201 | MS.gene010090:CDS | 35.0% | |
| AAGGAAAACAACAAATCCGA+AGG | + | chr5.2:56277084-56277103 | MS.gene010090:CDS | 35.0% | |
| AATATCAGTATCCTGCATGT+TGG | - | chr5.2:56276791-56276810 | None:intergenic | 35.0% | |
| AGCAGAACTAAAGACGATAA+AGG | + | chr5.2:56277065-56277084 | MS.gene010090:CDS | 35.0% | |
| AGTACAAAAGTTTGTGTGAC+TGG | - | chr5.2:56276574-56276593 | None:intergenic | 35.0% | |
| ATGATCATATCTTTCGGCTA+AGG | - | chr5.2:56274419-56274438 | None:intergenic | 35.0% | |
| CAAGTAATGCATATTCATGG+TGG | + | chr5.2:56273685-56273704 | MS.gene010090:CDS | 35.0% | |
| CACAAGCTCATCAATACATT+CGG | - | chr5.2:56275268-56275287 | None:intergenic | 35.0% | |
| CAGCAAGTAATGCATATTCA+TGG | + | chr5.2:56273682-56273701 | MS.gene010090:CDS | 35.0% | |
| CTTACCAAAGTAGAAGCAAT+AGG | + | chr5.2:56274706-56274725 | MS.gene010090:CDS | 35.0% | |
| GAAATCGAAGATCAGATAAC+AGG | + | chr5.2:56274823-56274842 | MS.gene010090:CDS | 35.0% | |
| GACAAAGAAATGCTTATAGC+AGG | + | chr5.2:56275396-56275415 | MS.gene010090:CDS | 35.0% | |
| GGACTTCGAAAATCTTTCTT+TGG | - | chr5.2:56274607-56274626 | None:intergenic | 35.0% | |
| TAATGCATATTCATGGTGGT+GGG | + | chr5.2:56273689-56273708 | MS.gene010090:CDS | 35.0% | |
| TAGAGAGAAAATTCTGTTGG+AGG | + | chr5.2:56275938-56275957 | MS.gene010090:CDS | 35.0% | |
| TATTCTGTGGTTGTTGTGTA+TGG | - | chr5.2:56276721-56276740 | None:intergenic | 35.0% | |
| TCTACAAATTCAACAAGCTC+AGG | - | chr5.2:56274373-56274392 | None:intergenic | 35.0% | |
| TGCAGTTTGCAAGATGAATT+TGG | + | chr5.2:56274862-56274881 | MS.gene010090:CDS | 35.0% | |
| TGGTGTATACTTGTATTCTG+TGG | - | chr5.2:56276734-56276753 | None:intergenic | 35.0% | |
| TGTTAATGATTCTGCTACGA+AGG | + | chr5.2:56275686-56275705 | MS.gene010090:CDS | 35.0% | |
| ! | ATCGATTAACCATACCGTTT+TGG | - | chr5.2:56275326-56275345 | None:intergenic | 35.0% |
| ! | CAAATTTGCTCTCTCTCTAT+TGG | - | chr5.2:56277678-56277697 | None:intergenic | 35.0% |
| ! | TCGATTAACCATACCGTTTT+GGG | - | chr5.2:56275325-56275344 | None:intergenic | 35.0% |
| ! | TGCCTTTTTCTGTAACTCAT+TGG | + | chr5.2:56274232-56274251 | MS.gene010090:intron | 35.0% |
| ! | TTCTCTTAGTTGGACCTTTT+CGG | - | chr5.2:56274645-56274664 | None:intergenic | 35.0% |
| !! | CTTTTTAGAAAATCAGGCCA+AGG | + | chr5.2:56276763-56276782 | MS.gene010090:CDS | 35.0% |
| !! | GAACGACTGATTTTTGCATT+TGG | - | chr5.2:56274576-56274595 | None:intergenic | 35.0% |
| !! | GAATCACAAGATTTTGACAC+TGG | + | chr5.2:56275864-56275883 | MS.gene010090:CDS | 35.0% |
| !! | GCAGATGTTTTTGAATGGAT+TGG | + | chr5.2:56275911-56275930 | MS.gene010090:CDS | 35.0% |
| !! | GGTTGATGATGTTTAGAATG+CGG | - | chr5.2:56277114-56277133 | None:intergenic | 35.0% |
| !! | TGTTGATGATCTTGCTATGA+AGG | + | chr5.2:56275662-56275681 | MS.gene010090:CDS | 35.0% |
| !! | TTGCAAGATGAATTTGGTGT+CGG | + | chr5.2:56274868-56274887 | MS.gene010090:CDS | 35.0% |
| !!! | AATGTCATTTTCAGTGTTCG+TGG | + | chr5.2:56276479-56276498 | MS.gene010090:intron | 35.0% |
| ACCGTCTGATCTTAACCAAA+CGG | + | chr5.2:56276192-56276211 | MS.gene010090:intron | 40.0% | |
| ACTTTGGTAAGATCTGATCC+TGG | - | chr5.2:56274697-56274716 | None:intergenic | 40.0% | |
| ATATGGTGTGGAACTTGATC+AGG | - | chr5.2:56274490-56274509 | None:intergenic | 40.0% | |
| ATTCAATGCAGTCGGTACAA+TGG | - | chr5.2:56276221-56276240 | None:intergenic | 40.0% | |
| CAAGATGAAATTGCAAGAGC+AGG | + | chr5.2:56277264-56277283 | MS.gene010090:CDS | 40.0% | |
| CACTCTTACTGTGACTGAAA+TGG | + | chr5.2:56275242-56275261 | MS.gene010090:CDS | 40.0% | |
| CCAAACAAGAAAGACCTCAA+AGG | - | chr5.2:56277558-56277577 | None:intergenic | 40.0% | |
| CTCACCTATTGCTTCTACTT+TGG | - | chr5.2:56274713-56274732 | None:intergenic | 40.0% | |
| CTTTCATCTGGATTTGTGTC+TGG | - | chr5.2:56276697-56276716 | None:intergenic | 40.0% | |
| GAAGAATGCTCTTGTGACAA+AGG | + | chr5.2:56276633-56276652 | MS.gene010090:CDS | 40.0% | |
| GGATTTGGATTCAATGCAGT+CGG | - | chr5.2:56276229-56276248 | None:intergenic | 40.0% | |
| GTAATGCATATTCATGGTGG+TGG | + | chr5.2:56273688-56273707 | MS.gene010090:CDS | 40.0% | |
| GTTAGTATCAGTGTCATGTC+TGG | + | chr5.2:56274100-56274119 | MS.gene010090:intron | 40.0% | |
| GTTGTGTATGGACTTTCATC+TGG | - | chr5.2:56276709-56276728 | None:intergenic | 40.0% | |
| TATGGTGTGGAACTTGATCA+GGG | - | chr5.2:56274489-56274508 | None:intergenic | 40.0% | |
| TCCGTTTGGTTAAGATCAGA+CGG | - | chr5.2:56276196-56276215 | None:intergenic | 40.0% | |
| TGAGATCGACAAACTTCAGA+AGG | + | chr5.2:56274729-56274748 | MS.gene010090:CDS | 40.0% | |
| TGATACTAACATGACGACGT+TGG | - | chr5.2:56274090-56274109 | None:intergenic | 40.0% | |
| TGCATTTGGTTGTTGAAGTC+AGG | - | chr5.2:56274562-56274581 | None:intergenic | 40.0% | |
| TTAGTCAGTTAGTACATCGG+TGG | + | chr5.2:56276122-56276141 | MS.gene010090:intron | 40.0% | |
| ! | AAAACTCGAGATTTTCCTCG+AGG | - | chr5.2:56276981-56277000 | None:intergenic | 40.0% |
| ! | AGCGCGCATATGAAAAGTAT+TGG | + | chr5.2:56274800-56274819 | MS.gene010090:CDS | 40.0% |
| ! | TAGAGCTTTAATGGCAGCAA+CGG | + | chr5.2:56274915-56274934 | MS.gene010090:CDS | 40.0% |
| ! | TCGAGGAAAATCTCGAGTTT+TGG | + | chr5.2:56276980-56276999 | MS.gene010090:CDS | 40.0% |
| ! | TCTCTTAGTTGGACCTTTTC+GGG | - | chr5.2:56274644-56274663 | None:intergenic | 40.0% |
| ! | TTACATGTCGGTGTTTGTCA+CGG | - | chr5.2:56276519-56276538 | None:intergenic | 40.0% |
| ! | TTTAGAATGCGGATGTCCTT+CGG | - | chr5.2:56277103-56277122 | None:intergenic | 40.0% |
| !! | ACAAGATTTTGACACTGGTG+AGG | + | chr5.2:56275869-56275888 | MS.gene010090:CDS | 40.0% |
| !! | AGTTGTTACTTTGGAAACCG+CGG | + | chr5.2:56275293-56275312 | MS.gene010090:CDS | 40.0% |
| !! | CAAGATTTTGACACTGGTGA+GGG | + | chr5.2:56275870-56275889 | MS.gene010090:CDS | 40.0% |
| !! | CCTTTGAGGTCTTTCTTGTT+TGG | + | chr5.2:56277555-56277574 | MS.gene010090:CDS | 40.0% |
| !! | GCGCGCATATGAAAAGTATT+GGG | + | chr5.2:56274801-56274820 | MS.gene010090:CDS | 40.0% |
| !! | TGGAGGCAGATGTTTTTGAA+TGG | + | chr5.2:56275906-56275925 | MS.gene010090:CDS | 40.0% |
| !! | TTGTTTTGTCCTAATGTGGC+TGG | - | chr5.2:56273715-56273734 | None:intergenic | 40.0% |
| !!! | CATTTTTGAGTTGGCACTTC+AGG | + | chr5.2:56276037-56276056 | MS.gene010090:CDS | 40.0% |
| !!! | TAGGGACAGCATTTTTGAGT+TGG | + | chr5.2:56276028-56276047 | MS.gene010090:CDS | 40.0% |
| ACCGTCTGATCTTGACCAAA+CGG | - | chr5.2:56276148-56276167 | None:intergenic | 45.0% | |
| AGACAAGCGGCAAAACCTTT+CGG | + | chr5.2:56276918-56276937 | MS.gene010090:CDS | 45.0% | |
| AGATCTGATCCTGGAGTTGT+TGG | - | chr5.2:56274688-56274707 | None:intergenic | 45.0% | |
| CATCGTCGTCGTCATCAATA+TGG | - | chr5.2:56274507-56274526 | None:intergenic | 45.0% | |
| CATGAAAACTCATCAGCCGT+TGG | + | chr5.2:56276862-56276881 | MS.gene010090:CDS | 45.0% | |
| GACGATGAAGAAAGTGACAC+AGG | + | chr5.2:56274520-56274539 | MS.gene010090:CDS | 45.0% | |
| GGCCGAAGTTGAGATTGTAT+AGG | - | chr5.2:56277135-56277154 | None:intergenic | 45.0% | |
| GTGTTGCAGGATGAACTACA+AGG | + | chr5.2:56277216-56277235 | MS.gene010090:CDS | 45.0% | |
| GTTGCAAGTGAGTTACAAGC+TGG | + | chr5.2:56277411-56277430 | MS.gene010090:CDS | 45.0% | |
| TAGAACCCTTGAGAAGCTCA+TGG | + | chr5.2:56276888-56276907 | MS.gene010090:CDS | 45.0% | |
| TATCCTGCATGTTGGATCCT+TGG | - | chr5.2:56276783-56276802 | None:intergenic | 45.0% | |
| TCGATGTTGCTATCCCGAAA+AGG | + | chr5.2:56274628-56274647 | MS.gene010090:CDS | 45.0% | |
| TCGTCGTCATCAATATGGTG+TGG | - | chr5.2:56274502-56274521 | None:intergenic | 45.0% | |
| TGAGCTTCTCAAGGGTTCTA+AGG | - | chr5.2:56276888-56276907 | None:intergenic | 45.0% | |
| TGGTTGGATCAATGTCTCCA+AGG | + | chr5.2:56273741-56273760 | MS.gene010090:CDS | 45.0% | |
| TGGTTGTTGAAGTCAGGAGA+TGG | - | chr5.2:56274556-56274575 | None:intergenic | 45.0% | |
| TTTCGGGATAGCAACATCGA+AGG | - | chr5.2:56274628-56274647 | None:intergenic | 45.0% | |
| ! | CGACGATGCTAGAGCTTTAA+TGG | + | chr5.2:56274906-56274925 | MS.gene010090:CDS | 45.0% |
| ! | CGGCTGATGAGTTTTCATGT+TGG | - | chr5.2:56276861-56276880 | None:intergenic | 45.0% |
| !! | AAAGGTTTTGCCGCTTGTCT+TGG | - | chr5.2:56276918-56276937 | None:intergenic | 45.0% |
| !! | GCTGGTCTTAGTCTTGTGAA+AGG | + | chr5.2:56277429-56277448 | MS.gene010090:CDS | 45.0% |
| AGGGTGATCAGCCTAATTGG+AGG | + | chr5.2:56275889-56275908 | MS.gene010090:CDS | 50.0% | |
| GCCGTTTGGTCAAGATCAGA+CGG | + | chr5.2:56276144-56276163 | MS.gene010090:intron | 50.0% | |
| GGAACACAATGCAGTGTTGC+AGG | + | chr5.2:56277203-56277222 | MS.gene010090:CDS | 50.0% | |
| GGTGTCTTCCCAAAACGGTA+TGG | + | chr5.2:56275314-56275333 | MS.gene010090:CDS | 50.0% | |
| GTCAGCCATGAGCTTCTCAA+GGG | - | chr5.2:56276896-56276915 | None:intergenic | 50.0% | |
| GTGAGGGTGATCAGCCTAAT+TGG | + | chr5.2:56275886-56275905 | MS.gene010090:CDS | 50.0% | |
| TCATGGCTGACCAAGACAAG+CGG | + | chr5.2:56276905-56276924 | MS.gene010090:CDS | 50.0% | |
| TCGGTACAATGGTGTCCGTT+TGG | - | chr5.2:56276210-56276229 | None:intergenic | 50.0% | |
| TGCTCTCTCTCTATTGGAGC+TGG | - | chr5.2:56277672-56277691 | None:intergenic | 50.0% | |
| TTAGTACATCGGTGGCCGTT+TGG | + | chr5.2:56276130-56276149 | MS.gene010090:intron | 50.0% | |
| ! | ACTCGAGATTTTCCTCGAGG+AGG | - | chr5.2:56276978-56276997 | None:intergenic | 50.0% |
| !! | CTCAAGGGTTCTAAGGCCAA+CGG | - | chr5.2:56276881-56276900 | None:intergenic | 50.0% |
| ACCGCGGTGTCTTCCCAAAA+CGG | + | chr5.2:56275309-56275328 | MS.gene010090:CDS | 55.0% | |
| AGGCCAAGGATCCAACATGC+AGG | + | chr5.2:56276777-56276796 | MS.gene010090:CDS | 55.0% | |
| GGTCAGCCATGAGCTTCTCA+AGG | - | chr5.2:56276897-56276916 | None:intergenic | 55.0% | |
| !!! | ACCGTTTTGGGAAGACACCG+CGG | - | chr5.2:56275313-56275332 | None:intergenic | 55.0% |
| GGAGGTCGTCGAGGTCTGAA+CGG | - | chr5.2:56276960-56276979 | None:intergenic | 60.0% | |
| TTTCCTCGAGGAGGTCGTCG+AGG | - | chr5.2:56276969-56276988 | None:intergenic | 60.0% | |
| AGACCTCGACGACCTCCTCG+AGG | + | chr5.2:56276963-56276982 | MS.gene010090:CDS | 65.0% | |
| !! | GGTGGTGGGCCAGCCACATT+AGG | + | chr5.2:56273703-56273722 | MS.gene010090:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.2 | gene | 56273669 | 56277698 | 56273669 | ID=MS.gene010090 |
| chr5.2 | mRNA | 56273669 | 56277698 | 56273669 | ID=MS.gene010090.t1;Parent=MS.gene010090 |
| chr5.2 | exon | 56273669 | 56273762 | 56273669 | ID=MS.gene010090.t1.exon1;Parent=MS.gene010090.t1 |
| chr5.2 | CDS | 56273669 | 56273762 | 56273669 | ID=cds.MS.gene010090.t1;Parent=MS.gene010090.t1 |
| chr5.2 | exon | 56274278 | 56276058 | 56274278 | ID=MS.gene010090.t1.exon2;Parent=MS.gene010090.t1 |
| chr5.2 | CDS | 56274278 | 56276058 | 56274278 | ID=cds.MS.gene010090.t1;Parent=MS.gene010090.t1 |
| chr5.2 | exon | 56276622 | 56277698 | 56276622 | ID=MS.gene010090.t1.exon3;Parent=MS.gene010090.t1 |
| chr5.2 | CDS | 56276622 | 56277698 | 56276622 | ID=cds.MS.gene010090.t1;Parent=MS.gene010090.t1 |
| Gene Sequence |
| Protein sequence |
