Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene008915.t1 | KEH20135.1 | 91 | 937 | 84 | 0 | 1 | 937 | 26 | 962 | 0.00E+00 | 1250 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene008915.t1 | F4IJK1 | 40.4 | 962 | 477 | 15 | 1 | 937 | 26 | 916 | 7.0e-85 | 317.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene008915.t1 | A0A072U2T5 | 91.0 | 937 | 84 | 0 | 1 | 937 | 26 | 962 | 0.0e+00 | 1250.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene008915 | MS.gene010090 | PPI |
| MS.gene008915 | MS.gene21314 | PPI |
| MS.gene049982 | MS.gene008915 | PPI |
| MS.gene013085 | MS.gene008915 | PPI |
| MS.gene37922 | MS.gene008915 | PPI |
| MS.gene020439 | MS.gene008915 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene008915.t1 | MTR_8g471130 | 96.051 | 937 | 37 | 0 | 1 | 937 | 26 | 962 | 0.0 | 1811 |
| MS.gene008915.t1 | MTR_5g032060 | 60.000 | 585 | 211 | 9 | 1 | 579 | 26 | 593 | 0.0 | 621 |
| MS.gene008915.t1 | MTR_5g032060 | 45.242 | 557 | 220 | 13 | 440 | 937 | 587 | 1117 | 2.54e-121 | 397 |
| MS.gene008915.t1 | MTR_3g100190 | 43.191 | 514 | 257 | 12 | 5 | 503 | 27 | 520 | 3.62e-107 | 354 |
| MS.gene008915.t1 | MTR_5g066340 | 37.853 | 354 | 161 | 9 | 641 | 937 | 590 | 941 | 1.12e-57 | 215 |
| MS.gene008915.t1 | MTR_1g071540 | 49.505 | 101 | 45 | 1 | 1 | 95 | 31 | 131 | 3.00e-25 | 114 |
| MS.gene008915.t1 | MTR_1g103160 | 46.729 | 107 | 54 | 1 | 1 | 104 | 26 | 132 | 5.07e-25 | 113 |
| MS.gene008915.t1 | MTR_1g103160 | 46.729 | 107 | 54 | 1 | 1 | 104 | 29 | 135 | 5.11e-25 | 113 |
| MS.gene008915.t1 | MTR_5g006520 | 28.846 | 364 | 187 | 9 | 3 | 337 | 31 | 351 | 2.98e-24 | 110 |
| MS.gene008915.t1 | MTR_5g006520 | 28.846 | 364 | 187 | 9 | 3 | 337 | 31 | 351 | 4.80e-24 | 110 |
| MS.gene008915.t1 | MTR_7g095410 | 44.248 | 113 | 52 | 1 | 1 | 113 | 29 | 130 | 1.45e-23 | 108 |
| MS.gene008915.t1 | MTR_7g095410 | 44.248 | 113 | 52 | 1 | 1 | 113 | 29 | 130 | 1.52e-23 | 108 |
| MS.gene008915.t1 | MTR_1g103160 | 47.000 | 100 | 50 | 1 | 8 | 104 | 1 | 100 | 6.47e-23 | 106 |
| MS.gene008915.t1 | MTR_6g016950 | 81.481 | 54 | 10 | 0 | 738 | 791 | 7 | 60 | 4.99e-22 | 90.9 |
| MS.gene008915.t1 | MTR_7g095410 | 44.340 | 106 | 48 | 1 | 8 | 113 | 1 | 95 | 2.15e-21 | 101 |
| MS.gene008915.t1 | MTR_5g075490 | 45.192 | 104 | 47 | 3 | 3 | 106 | 39 | 132 | 5.51e-20 | 95.5 |
| MS.gene008915.t1 | MTR_3g467610 | 47.312 | 93 | 44 | 2 | 8 | 98 | 15 | 104 | 6.15e-18 | 89.0 |
| MS.gene008915.t1 | MTR_7g108070 | 47.297 | 74 | 39 | 0 | 1 | 74 | 28 | 101 | 5.57e-17 | 83.2 |
| MS.gene008915.t1 | MTR_1g088965 | 37.778 | 90 | 52 | 1 | 1 | 86 | 32 | 121 | 2.94e-13 | 73.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene008915.t1 | AT2G22560 | 46.875 | 960 | 418 | 24 | 1 | 937 | 26 | 916 | 0.0 | 707 |
| MS.gene008915.t1 | AT5G10500 | 45.212 | 449 | 214 | 7 | 1 | 444 | 26 | 447 | 1.57e-109 | 358 |
| MS.gene008915.t1 | AT5G10500 | 41.414 | 297 | 136 | 6 | 641 | 937 | 558 | 816 | 3.80e-48 | 185 |
| MS.gene008915.t1 | AT1G58215 | 42.339 | 496 | 216 | 11 | 1 | 466 | 26 | 481 | 5.56e-106 | 351 |
| MS.gene008915.t1 | AT1G58215 | 38.402 | 388 | 177 | 7 | 612 | 937 | 514 | 901 | 7.24e-62 | 227 |
| MS.gene008915.t1 | AT1G09720 | 42.129 | 451 | 224 | 7 | 1 | 443 | 26 | 447 | 4.05e-94 | 318 |
| MS.gene008915.t1 | AT1G09720 | 39.306 | 346 | 164 | 9 | 633 | 937 | 537 | 877 | 3.26e-59 | 219 |
| MS.gene008915.t1 | AT3G22790 | 29.106 | 481 | 263 | 16 | 1 | 442 | 28 | 469 | 5.95e-33 | 139 |
| MS.gene008915.t1 | AT3G22790 | 29.106 | 481 | 263 | 16 | 1 | 442 | 28 | 469 | 5.95e-33 | 139 |
| MS.gene008915.t1 | AT3G22790 | 29.106 | 481 | 263 | 16 | 1 | 442 | 28 | 469 | 5.95e-33 | 139 |
| MS.gene008915.t1 | AT4G14760 | 28.151 | 476 | 273 | 18 | 1 | 442 | 28 | 468 | 1.94e-26 | 117 |
| MS.gene008915.t1 | AT4G14760 | 28.151 | 476 | 273 | 18 | 1 | 442 | 28 | 468 | 1.94e-26 | 117 |
| MS.gene008915.t1 | AT4G14760 | 28.151 | 476 | 273 | 18 | 1 | 442 | 28 | 468 | 1.94e-26 | 117 |
| MS.gene008915.t1 | AT4G14760 | 28.151 | 476 | 273 | 18 | 1 | 442 | 28 | 468 | 1.94e-26 | 117 |
| MS.gene008915.t1 | AT1G03080 | 35.220 | 159 | 92 | 2 | 1 | 153 | 28 | 181 | 4.78e-24 | 110 |
| MS.gene008915.t1 | AT1G03080 | 35.220 | 159 | 92 | 2 | 1 | 153 | 28 | 181 | 4.78e-24 | 110 |
| MS.gene008915.t1 | AT1G03080 | 35.220 | 159 | 92 | 2 | 1 | 153 | 28 | 181 | 4.78e-24 | 110 |
| MS.gene008915.t1 | AT4G02710 | 41.818 | 110 | 59 | 1 | 1 | 110 | 29 | 133 | 5.19e-23 | 106 |
| MS.gene008915.t1 | AT2G30500 | 54.930 | 71 | 31 | 1 | 1 | 71 | 37 | 106 | 2.04e-17 | 87.0 |
| MS.gene008915.t1 | AT2G30500 | 54.930 | 71 | 31 | 1 | 1 | 71 | 37 | 106 | 2.04e-17 | 87.0 |
| MS.gene008915.t1 | AT2G30500 | 54.930 | 71 | 31 | 1 | 1 | 71 | 36 | 105 | 2.25e-17 | 87.0 |
| MS.gene008915.t1 | AT2G47920 | 40.404 | 99 | 52 | 1 | 1 | 92 | 25 | 123 | 1.09e-15 | 77.8 |
| MS.gene008915.t1 | AT2G47920 | 40.404 | 99 | 52 | 1 | 1 | 92 | 25 | 123 | 1.09e-15 | 77.8 |
| MS.gene008915.t1 | AT5G58320 | 50.725 | 69 | 34 | 0 | 1 | 69 | 37 | 105 | 2.38e-15 | 80.5 |
| MS.gene008915.t1 | AT5G58320 | 50.725 | 69 | 34 | 0 | 1 | 69 | 37 | 105 | 2.38e-15 | 80.5 |
| MS.gene008915.t1 | AT5G58320 | 50.725 | 69 | 34 | 0 | 1 | 69 | 37 | 105 | 2.47e-15 | 80.9 |
| MS.gene008915.t1 | AT5G58320 | 50.725 | 69 | 34 | 0 | 1 | 69 | 37 | 105 | 2.47e-15 | 80.9 |
| MS.gene008915.t1 | AT1G03470 | 54.098 | 61 | 28 | 0 | 1 | 61 | 23 | 83 | 3.16e-15 | 77.4 |
| MS.gene008915.t1 | AT1G03470 | 54.098 | 61 | 28 | 0 | 1 | 61 | 23 | 83 | 3.16e-15 | 77.4 |
| MS.gene008915.t1 | AT1G03470 | 54.098 | 61 | 28 | 0 | 1 | 61 | 23 | 83 | 3.16e-15 | 77.4 |
| MS.gene008915.t1 | AT1G03470 | 54.098 | 61 | 28 | 0 | 1 | 61 | 23 | 83 | 3.16e-15 | 77.4 |
| MS.gene008915.t1 | AT5G58320 | 51.613 | 62 | 30 | 0 | 8 | 69 | 1 | 62 | 1.03e-13 | 75.1 |
Find 127 sgRNAs with CRISPR-Local
Find 184 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATCATCATTCAATAAGATTT+TGG | 0.176661 | 8.2:-34155517 | None:intergenic |
| TTTCTACTCAATCCTGATTT+AGG | 0.182892 | 8.2:-34154316 | None:intergenic |
| CCTTACTTCCCTTACTCTTT+TGG | 0.192513 | 8.2:-34154644 | None:intergenic |
| ACGCTGTTGTTATCTCTTCT+TGG | 0.211296 | 8.2:-34156421 | None:intergenic |
| CCTCGTTCGGTATCACCTTT+TGG | 0.225729 | 8.2:-34155398 | None:intergenic |
| AATCCTGATTTAGGAGCTTT+AGG | 0.233147 | 8.2:-34154307 | None:intergenic |
| ATAATTCCATTGCTAGATAT+TGG | 0.234388 | 8.2:+34154422 | MS.gene008915:CDS |
| ACCGAGTTCGTCTTGCAAAT+TGG | 0.261286 | 8.2:-34154485 | None:intergenic |
| CCTCGTCTGGTATCACCTTT+TGG | 0.262190 | 8.2:-34155191 | None:intergenic |
| TCAACAGCAGAAGTTGATTC+TGG | 0.268774 | 8.2:-34156086 | None:intergenic |
| TTTACATCTCGTTTCGGCCT+CGG | 0.284477 | 8.2:-34154724 | None:intergenic |
| GCAAACGTGACAATGCTTCT+TGG | 0.304395 | 8.2:-34154579 | None:intergenic |
| TCCATATAAGGAACTCTATC+TGG | 0.306812 | 8.2:-34154115 | None:intergenic |
| AAATCTTTGAGTGGAGTCTT+TGG | 0.314691 | 8.2:-34154214 | None:intergenic |
| CTGCTGTTGAAGAGAAGTTT+AGG | 0.318730 | 8.2:+34156099 | MS.gene008915:CDS |
| CAATACGGCCATTTATTCAT+TGG | 0.319468 | 8.2:+34155548 | MS.gene008915:CDS |
| CAATACGGCCATTGATTCAT+TGG | 0.327975 | 8.2:+34155365 | MS.gene008915:CDS |
| AGTGGAGTCTTTGGAGCTTT+CGG | 0.333188 | 8.2:-34154205 | None:intergenic |
| CAATGAATCAATGGCCGTAT+TGG | 0.335865 | 8.2:-34155364 | None:intergenic |
| CAACTTCGCAAGAGCCTTCT+CGG | 0.338123 | 8.2:-34156597 | None:intergenic |
| TGAAACGGAAAAGGAAAGTT+TGG | 0.339852 | 8.2:+34155011 | MS.gene008915:CDS |
| TCCAGATAGAGTTCCTTATA+TGG | 0.346090 | 8.2:+34154114 | MS.gene008915:CDS |
| TAGAGGAGAATCTAGAATTC+TGG | 0.350291 | 8.2:+34156141 | MS.gene008915:CDS |
| AAATCATGAAAAGGATTATA+AGG | 0.353380 | 8.2:+34155710 | MS.gene008915:CDS |
| TAATTCCATTGCTAGATATT+GGG | 0.353589 | 8.2:+34154423 | MS.gene008915:CDS |
| TCTCTTTCTTTCAACACTAT+AGG | 0.361479 | 8.2:-34155636 | None:intergenic |
| CGAAGAACCGCGTTCCTCTA+AGG | 0.362493 | 8.2:+34156675 | MS.gene008915:CDS |
| TCGTCGTCCTCATCCATATA+AGG | 0.365262 | 8.2:-34154127 | None:intergenic |
| GTCACGTTTGCAAGAGAAAC+AGG | 0.366657 | 8.2:+34154591 | MS.gene008915:CDS |
| CAATGAATAAATGGCCGTAT+TGG | 0.369188 | 8.2:-34155547 | None:intergenic |
| CATATTGAAGTTGATTCATA+AGG | 0.369783 | 8.2:-34154681 | None:intergenic |
| TATCGAAGCTCGAAACAAAA+TGG | 0.379973 | 8.2:+34156234 | MS.gene008915:CDS |
| TCAACAAAGTTTATTAGCTC+TGG | 0.383758 | 8.2:-34153998 | None:intergenic |
| GATACCAGACGAGGAGGATA+TGG | 0.383939 | 8.2:+34155200 | MS.gene008915:CDS |
| CCAAAGATAAATGACCTTAG+AGG | 0.389815 | 8.2:-34156689 | None:intergenic |
| CCAAAAGAGTAAGGGAAGTA+AGG | 0.391738 | 8.2:+34154644 | MS.gene008915:CDS |
| ACTCTTTGAGTCATCATTGC+AGG | 0.395563 | 8.2:+34155893 | MS.gene008915:CDS |
| TTTCGAGGCTGGCTCAAATT+CGG | 0.396521 | 8.2:+34154843 | MS.gene008915:CDS |
| GACAGAAGCAATTGTGTTGT+TGG | 0.400635 | 8.2:-34154089 | None:intergenic |
| TGTGATTTAACGTTATGTTT+CGG | 0.407395 | 8.2:-34155477 | None:intergenic |
| TTTGGAGCTTTCGGAACGTT+TGG | 0.418385 | 8.2:-34154196 | None:intergenic |
| TCGAATCCGAAGGTCTCATC+TGG | 0.419762 | 8.2:-34156655 | None:intergenic |
| AGTTTCTTCTCAAACAGCTT+TGG | 0.420468 | 8.2:+34154936 | MS.gene008915:CDS |
| TTCAAAATGAACTCACACTA+TGG | 0.420988 | 8.2:+34156336 | MS.gene008915:CDS |
| TGTGATTTAACATCATGTTT+CGG | 0.423322 | 8.2:-34155291 | None:intergenic |
| TACAAAAGATTTACTGATTG+AGG | 0.424969 | 8.2:+34156211 | MS.gene008915:CDS |
| GAACGAGAAACTTAGAGAAA+TGG | 0.426500 | 8.2:+34155053 | MS.gene008915:CDS |
| GGCTTTAACCGTGACAGAAA+TGG | 0.430771 | 8.2:+34154864 | MS.gene008915:CDS |
| ACTTAGAGAAATGGACGAAA+TGG | 0.431565 | 8.2:+34155062 | MS.gene008915:CDS |
| AAATCGAGTCCAAAAGAGTA+AGG | 0.433279 | 8.2:+34154635 | MS.gene008915:CDS |
| TTTAAAGCTTCTAGAAGAAG+AGG | 0.435154 | 8.2:+34153931 | MS.gene008915:CDS |
| ACTCCTAAAGCTCCTAAATC+AGG | 0.441379 | 8.2:+34154304 | MS.gene008915:CDS |
| TCGAATCTCTTCGTCTTTCA+CGG | 0.443211 | 8.2:-34155940 | None:intergenic |
| CGAGATGTAAAAGAAGTAAC+AGG | 0.444047 | 8.2:+34154736 | MS.gene008915:CDS |
| GAAGATTAAAGAACATTTCG+AGG | 0.454058 | 8.2:+34154828 | MS.gene008915:CDS |
| GATACCGAACGAGGAGGATA+AGG | 0.464288 | 8.2:+34155407 | MS.gene008915:CDS |
| GAGCAGAAATGTATTACAAA+AGG | 0.465180 | 8.2:+34153972 | MS.gene008915:CDS |
| AAATGAACTCACACTATGGC+TGG | 0.467020 | 8.2:+34156340 | MS.gene008915:CDS |
| CTCACCTTATCCTCCTCGTT+CGG | 0.467284 | 8.2:-34155411 | None:intergenic |
| TATTGTTGTTGCTTTCTCCT+CGG | 0.467309 | 8.2:-34155772 | None:intergenic |
| CGAGGAGGCTCGCCGTTTGA+TGG | 0.468797 | 8.2:+34154534 | MS.gene008915:CDS |
| TCATATTTAAAACCTCTCCT+TGG | 0.469191 | 8.2:-34156502 | None:intergenic |
| ATTAAAGAACATTTCGAGGC+TGG | 0.469351 | 8.2:+34154832 | MS.gene008915:CDS |
| GCTGGTTCGCAACCTTGAAA+CGG | 0.479618 | 8.2:+34154996 | MS.gene008915:CDS |
| GTTGCTGATGAGCTTCAAGC+TGG | 0.484637 | 8.2:+34156542 | MS.gene008915:CDS |
| TTGGAGGGAAATGAAGAAAT+CGG | 0.485167 | 8.2:+34155999 | MS.gene008915:CDS |
| TGAAGTATTTCAAACAGAAA+AGG | 0.488473 | 8.2:+34155227 | MS.gene008915:CDS |
| TGTTCTGATCTTCAACAACT+TGG | 0.492297 | 8.2:-34155107 | None:intergenic |
| ACCAGAAAATCATGTTATTG+AGG | 0.492750 | 8.2:+34156043 | MS.gene008915:CDS |
| TGTTTCGTATTTCTGTATCT+CGG | 0.495141 | 8.2:-34156186 | None:intergenic |
| ATTGGAAAATGAAGTCCAAA+AGG | 0.496529 | 8.2:+34155383 | MS.gene008915:CDS |
| TCTCTCTGATAAAGTCCAAA+AGG | 0.496569 | 8.2:+34155176 | MS.gene008915:CDS |
| ATAATACAATCAATTGATGC+TGG | 0.499961 | 8.2:+34155687 | MS.gene008915:CDS |
| ATATTGAAGTTGATTCATAA+GGG | 0.500924 | 8.2:-34154680 | None:intergenic |
| GGAAACTGAGGGACAGATCA+AGG | 0.501428 | 8.2:+34154444 | MS.gene008915:CDS |
| GAGAAACCAGATGAGACCTT+CGG | 0.505800 | 8.2:+34156649 | MS.gene008915:CDS |
| CAAAAGAGTAAGGGAAGTAA+GGG | 0.506192 | 8.2:+34154645 | MS.gene008915:CDS |
| CTCACCATATCCTCCTCGTC+TGG | 0.514354 | 8.2:-34155204 | None:intergenic |
| TGATGCTGGAAATCATGAAA+AGG | 0.514888 | 8.2:+34155701 | MS.gene008915:CDS |
| TCGCAACCTTGAAACGGAAA+AGG | 0.515404 | 8.2:+34155002 | MS.gene008915:CDS |
| TCCAATTTGCAAGACGAACT+CGG | 0.522122 | 8.2:+34154484 | MS.gene008915:CDS |
| ATCAAGACTACAATGCGCTT+CGG | 0.526939 | 8.2:-34155151 | None:intergenic |
| CGTACCTATCGGCTAAAGAT+CGG | 0.533688 | 8.2:-34154039 | None:intergenic |
| TATAATGCTGCGAAATTCCA+AGG | 0.539140 | 8.2:+34156485 | MS.gene008915:CDS |
| AACTGATGAACTCCATTCGC+TGG | 0.544339 | 8.2:+34154978 | MS.gene008915:CDS |
| GAGCCGCTTCTGCCATCAAA+CGG | 0.544838 | 8.2:-34154546 | None:intergenic |
| TTAAAGCTTCTAGAAGAAGA+GGG | 0.544929 | 8.2:+34153932 | MS.gene008915:CDS |
| TAGAGTTCCTTATATGGATG+AGG | 0.558198 | 8.2:+34154120 | MS.gene008915:CDS |
| TCTTCAACTTGATGCCGAGA+AGG | 0.562178 | 8.2:+34156583 | MS.gene008915:CDS |
| TGTTGAAGAGAAGTTTAGGA+TGG | 0.566244 | 8.2:+34156103 | MS.gene008915:CDS |
| TCTGCAAGGTGCTTATAAAG+TGG | 0.568092 | 8.2:-34156311 | None:intergenic |
| TGATGATGCAAAGTCCAATA+CGG | 0.568206 | 8.2:+34155533 | MS.gene008915:CDS |
| TGCTAGATATTGGGAAACTG+AGG | 0.569587 | 8.2:+34154432 | MS.gene008915:CDS |
| GGAAAACAGCGCGTTGCTGA+AGG | 0.570843 | 8.2:+34156361 | MS.gene008915:CDS |
| TCGCCGTTTGATGGCAGAAG+CGG | 0.572967 | 8.2:+34154543 | MS.gene008915:CDS |
| TGATGATGCAAAATCCAATA+CGG | 0.576914 | 8.2:+34155350 | MS.gene008915:CDS |
| TAGAAAGCAAGCAATTGAAG+AGG | 0.578147 | 8.2:+34154333 | MS.gene008915:CDS |
| TTGCTGATGAGCTTCAAGCT+GGG | 0.579094 | 8.2:+34156543 | MS.gene008915:CDS |
| CAAGGTTGCGAACCAGCGAA+TGG | 0.582849 | 8.2:-34154990 | None:intergenic |
| GTTGAAGAGAAGTTTAGGAT+GGG | 0.590016 | 8.2:+34156104 | MS.gene008915:CDS |
| AATGAAATGTGCAGATATGG+AGG | 0.592734 | 8.2:+34153892 | MS.gene008915:intron |
| TTATAAGGAAATTTCATCTG+AGG | 0.593385 | 8.2:+34155725 | MS.gene008915:CDS |
| CTTGTTACTGAATTTCCTTG+TGG | 0.598228 | 8.2:-34154263 | None:intergenic |
| ACAAAATGGAAAGCAACAGA+AGG | 0.603333 | 8.2:+34156248 | MS.gene008915:CDS |
| TGCTGCGAAATTCCAAGGAG+AGG | 0.604091 | 8.2:+34156490 | MS.gene008915:CDS |
| AAAAGAAGTAACAGGAACAA+AGG | 0.607695 | 8.2:+34154744 | MS.gene008915:CDS |
| TGATAAGTGATCGTACCTAT+CGG | 0.609920 | 8.2:-34154050 | None:intergenic |
| ACGACGACGAAGCATCGCCA+AGG | 0.611893 | 8.2:+34154143 | MS.gene008915:CDS |
| AATCGAGTCCAAAAGAGTAA+GGG | 0.614608 | 8.2:+34154636 | MS.gene008915:CDS |
| TTGCAAGACGAACTCGGTGA+AGG | 0.618782 | 8.2:+34154490 | MS.gene008915:CDS |
| GGGAATCGACGAACTTCTAG+AGG | 0.619415 | 8.2:+34156124 | MS.gene008915:CDS |
| AGTTTCCCAATATCTAGCAA+TGG | 0.619821 | 8.2:-34154428 | None:intergenic |
| ACGCGGTTCTTCGAATCCGA+AGG | 0.627812 | 8.2:-34156665 | None:intergenic |
| CGGCTAAAGATCGGTATGCA+CGG | 0.631655 | 8.2:-34154030 | None:intergenic |
| AATCCAATTCGCAAAAGCCG+AGG | 0.632575 | 8.2:+34154707 | MS.gene008915:CDS |
| TGGATGGAACAAAACCTCCA+AGG | 0.641564 | 8.2:+34153386 | None:intergenic |
| GCTAGATATTGGGAAACTGA+GGG | 0.645079 | 8.2:+34154433 | MS.gene008915:CDS |
| TAATGTTATTGATGACGAGG+AGG | 0.647964 | 8.2:+34154519 | MS.gene008915:CDS |
| CATACCGATCTTTAGCCGAT+AGG | 0.649267 | 8.2:+34154035 | MS.gene008915:CDS |
| CCAAAAGGTGATACCGAACG+AGG | 0.672752 | 8.2:+34155398 | MS.gene008915:CDS |
| TTCTTGGATTTCACACAACG+AGG | 0.672893 | 8.2:-34156405 | None:intergenic |
| TAACGACAGCGACAGCCACA+AGG | 0.673857 | 8.2:+34154248 | MS.gene008915:CDS |
| TGTTAATGTTATTGATGACG+AGG | 0.676108 | 8.2:+34154516 | MS.gene008915:CDS |
| AAAGGTGATACCAGACGAGG+AGG | 0.687210 | 8.2:+34155194 | MS.gene008915:CDS |
| CCAAAAGGTGATACCAGACG+AGG | 0.697912 | 8.2:+34155191 | MS.gene008915:CDS |
| AAAGGTGATACCGAACGAGG+AGG | 0.701902 | 8.2:+34155401 | MS.gene008915:CDS |
| TAAATGACCTTAGAGGAACG+CGG | 0.809765 | 8.2:-34156682 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TAAACTGTTAATTTTTTTAT+TGG | + | chr8.2:34156837-34156856 | MS.gene008915:intron | 10.0% |
| !! | AATATACAAACAAGAAAATT+AGG | - | chr8.2:34153423-34153442 | None:intergenic | 15.0% |
| !! | TATTACTTTACAATTACATT+AGG | - | chr8.2:34156791-34156810 | None:intergenic | 15.0% |
| !!! | ATTTTTTTATTGGTTTCATT+AGG | + | chr8.2:34156847-34156866 | MS.gene008915:intron | 15.0% |
| !! | AAATCATGAAAAGGATTATA+AGG | + | chr8.2:34155710-34155729 | MS.gene008915:CDS | 20.0% |
| !!! | ATATTGAAGTTGATTCATAA+GGG | - | chr8.2:34154683-34154702 | None:intergenic | 20.0% |
| !!! | ATCATCATTCAATAAGATTT+TGG | - | chr8.2:34155520-34155539 | None:intergenic | 20.0% |
| !!! | TTCATTTTCCAATGAATAAA+TGG | - | chr8.2:34155559-34155578 | None:intergenic | 20.0% |
| ! | AAAACTTAACTATCCATGTA+CGG | - | chr8.2:34153698-34153717 | None:intergenic | 25.0% |
| ! | ATAATACAATCAATTGATGC+TGG | + | chr8.2:34155687-34155706 | MS.gene008915:CDS | 25.0% |
| ! | ATAATTCCATTGCTAGATAT+TGG | + | chr8.2:34154422-34154441 | MS.gene008915:CDS | 25.0% |
| ! | ATTAGGAGAAAAAATAACCT+TGG | - | chr8.2:34153406-34153425 | None:intergenic | 25.0% |
| ! | TAACAAGTACAAAACCAATA+TGG | - | chr8.2:34153840-34153859 | None:intergenic | 25.0% |
| ! | TAATTCCATTGCTAGATATT+GGG | + | chr8.2:34154423-34154442 | MS.gene008915:CDS | 25.0% |
| ! | TACAAAACCAATATGGTAAT+AGG | - | chr8.2:34153833-34153852 | None:intergenic | 25.0% |
| ! | TATATCATCATTTCAAAGCA+CGG | - | chr8.2:34156766-34156785 | None:intergenic | 25.0% |
| ! | TGTGATTTAACATCATGTTT+CGG | - | chr8.2:34155294-34155313 | None:intergenic | 25.0% |
| ! | TGTGATTTAACGTTATGTTT+CGG | - | chr8.2:34155480-34155499 | None:intergenic | 25.0% |
| ! | TTATAAGGAAATTTCATCTG+AGG | + | chr8.2:34155725-34155744 | MS.gene008915:CDS | 25.0% |
| !! | CATATTGAAGTTGATTCATA+AGG | - | chr8.2:34154684-34154703 | None:intergenic | 25.0% |
| !! | CTCTATACATTTTTCTACTT+TGG | - | chr8.2:34153481-34153500 | None:intergenic | 25.0% |
| !! | TACAAAAGATTTACTGATTG+AGG | + | chr8.2:34156211-34156230 | MS.gene008915:CDS | 25.0% |
| !! | TGAAGTATTTCAAACAGAAA+AGG | + | chr8.2:34155227-34155246 | MS.gene008915:CDS | 25.0% |
| !! | TTCATTTTCCAATGAATCAA+TGG | - | chr8.2:34155376-34155395 | None:intergenic | 25.0% |
| !!! | ACACTTTTTAAATCTTTGAG+TGG | - | chr8.2:34154226-34154245 | None:intergenic | 25.0% |
| !!! | ATAGACTGTTTTTGTTTCTT+TGG | - | chr8.2:34156722-34156741 | None:intergenic | 25.0% |
| !!! | TTCTTCTTTTGTTTGTGAAT+CGG | - | chr8.2:34155592-34155611 | None:intergenic | 25.0% |
| AAAAGAAGTAACAGGAACAA+AGG | + | chr8.2:34154744-34154763 | MS.gene008915:CDS | 30.0% | |
| ACCAGAAAATCATGTTATTG+AGG | + | chr8.2:34156043-34156062 | MS.gene008915:CDS | 30.0% | |
| AGAATCACACATATTAAGTG+TGG | + | chr8.2:34153750-34153769 | MS.gene008915:intron | 30.0% | |
| ATTGGAAAATGAAGTCCAAA+AGG | + | chr8.2:34155383-34155402 | MS.gene008915:CDS | 30.0% | |
| CAAAATGAAATGTGCAGATA+TGG | + | chr8.2:34153889-34153908 | MS.gene008915:intron | 30.0% | |
| GAAGATTAAAGAACATTTCG+AGG | + | chr8.2:34154828-34154847 | MS.gene008915:CDS | 30.0% | |
| GAGCAGAAATGTATTACAAA+AGG | + | chr8.2:34153972-34153991 | MS.gene008915:CDS | 30.0% | |
| GCGAAGTTGAATGAAAAATT+TGG | + | chr8.2:34156611-34156630 | MS.gene008915:CDS | 30.0% | |
| TACGGGAAAATAATTAAGGA+AGG | + | chr8.2:34153637-34153656 | MS.gene008915:intron | 30.0% | |
| TCAACAAAGTTTATTAGCTC+TGG | - | chr8.2:34154001-34154020 | None:intergenic | 30.0% | |
| TCATACGGGAAAAAAAATTG+AGG | + | chr8.2:34153553-34153572 | MS.gene008915:intron | 30.0% | |
| TCTCTTTCTTTCAACACTAT+AGG | - | chr8.2:34155639-34155658 | None:intergenic | 30.0% | |
| TTCAAAATGAACTCACACTA+TGG | + | chr8.2:34156336-34156355 | MS.gene008915:CDS | 30.0% | |
| TTCGTACGGGAAAATAATTA+AGG | + | chr8.2:34153633-34153652 | MS.gene008915:intron | 30.0% | |
| TTTCTACTCAATCCTGATTT+AGG | - | chr8.2:34154319-34154338 | None:intergenic | 30.0% | |
| ! | AAAAACGAGCAATACGTTTT+TGG | + | chr8.2:34153592-34153611 | MS.gene008915:intron | 30.0% |
| ! | ACTTCTTTTACATCTCGTTT+CGG | - | chr8.2:34154733-34154752 | None:intergenic | 30.0% |
| ! | AGTCTATCTTTTCAATGCAT+AGG | + | chr8.2:34156735-34156754 | MS.gene008915:intron | 30.0% |
| ! | TCAATAACATGATTTTCTGG+TGG | - | chr8.2:34156044-34156063 | None:intergenic | 30.0% |
| ! | TCATATTTAAAACCTCTCCT+TGG | - | chr8.2:34156505-34156524 | None:intergenic | 30.0% |
| ! | TCCTCAATAACATGATTTTC+TGG | - | chr8.2:34156047-34156066 | None:intergenic | 30.0% |
| ! | TGATGATGCAAAATCCAATA+CGG | + | chr8.2:34155350-34155369 | MS.gene008915:CDS | 30.0% |
| ! | TGTTTCGTATTTCTGTATCT+CGG | - | chr8.2:34156189-34156208 | None:intergenic | 30.0% |
| ! | TTAAAGCTTCTAGAAGAAGA+GGG | + | chr8.2:34153932-34153951 | MS.gene008915:CDS | 30.0% |
| ! | TTTAAAGCTTCTAGAAGAAG+AGG | + | chr8.2:34153931-34153950 | MS.gene008915:CDS | 30.0% |
| !! | ATTGATCATTTTTCTATCCG+TGG | - | chr8.2:34153665-34153684 | None:intergenic | 30.0% |
| !! | TACTTTTAAAGAAGATTCCG+AGG | + | chr8.2:34155755-34155774 | MS.gene008915:CDS | 30.0% |
| !! | TGTTAATGTTATTGATGACG+AGG | + | chr8.2:34154516-34154535 | MS.gene008915:CDS | 30.0% |
| !!! | ATGCTTTGCTTTTAGAGTAT+AGG | + | chr8.2:34155802-34155821 | MS.gene008915:CDS | 30.0% |
| AAATCGAGTCCAAAAGAGTA+AGG | + | chr8.2:34154635-34154654 | MS.gene008915:CDS | 35.0% | |
| AAATCTTTGAGTGGAGTCTT+TGG | - | chr8.2:34154217-34154236 | None:intergenic | 35.0% | |
| AATAAGTGACTTACCGTACA+TGG | + | chr8.2:34153682-34153701 | MS.gene008915:intron | 35.0% | |
| AATCCTGATTTAGGAGCTTT+AGG | - | chr8.2:34154310-34154329 | None:intergenic | 35.0% | |
| AATCGAGTCCAAAAGAGTAA+GGG | + | chr8.2:34154636-34154655 | MS.gene008915:CDS | 35.0% | |
| AATGAAATGTGCAGATATGG+AGG | + | chr8.2:34153892-34153911 | MS.gene008915:intron | 35.0% | |
| ACAAAATGGAAAGCAACAGA+AGG | + | chr8.2:34156248-34156267 | MS.gene008915:CDS | 35.0% | |
| ACCAATATGGTAATAGGTTG+TGG | - | chr8.2:34153827-34153846 | None:intergenic | 35.0% | |
| ACGGGAAAAAAAATTGAGGA+AGG | + | chr8.2:34153557-34153576 | MS.gene008915:intron | 35.0% | |
| ACTTAGAGAAATGGACGAAA+TGG | + | chr8.2:34155062-34155081 | MS.gene008915:CDS | 35.0% | |
| AGGAGAAAAAATAACCTTGG+AGG | - | chr8.2:34153403-34153422 | None:intergenic | 35.0% | |
| AGTTTCCCAATATCTAGCAA+TGG | - | chr8.2:34154431-34154450 | None:intergenic | 35.0% | |
| AGTTTCTTCTCAAACAGCTT+TGG | + | chr8.2:34154936-34154955 | MS.gene008915:CDS | 35.0% | |
| ATTAAAGAACATTTCGAGGC+TGG | + | chr8.2:34154832-34154851 | MS.gene008915:CDS | 35.0% | |
| CAAAAGAGTAAGGGAAGTAA+GGG | + | chr8.2:34154645-34154664 | MS.gene008915:CDS | 35.0% | |
| CAATACGGCCATTTATTCAT+TGG | + | chr8.2:34155548-34155567 | MS.gene008915:CDS | 35.0% | |
| CAATGAATAAATGGCCGTAT+TGG | - | chr8.2:34155550-34155569 | None:intergenic | 35.0% | |
| CATATTAAGTGTGGAGAAGA+TGG | + | chr8.2:34153759-34153778 | MS.gene008915:intron | 35.0% | |
| CCAAAGATAAATGACCTTAG+AGG | - | chr8.2:34156692-34156711 | None:intergenic | 35.0% | |
| CCAATATGGTAATAGGTTGT+GGG | - | chr8.2:34153826-34153845 | None:intergenic | 35.0% | |
| CGAGATGTAAAAGAAGTAAC+AGG | + | chr8.2:34154736-34154755 | MS.gene008915:CDS | 35.0% | |
| CTTGTTACTGAATTTCCTTG+TGG | - | chr8.2:34154266-34154285 | None:intergenic | 35.0% | |
| GAACGAGAAACTTAGAGAAA+TGG | + | chr8.2:34155053-34155072 | MS.gene008915:CDS | 35.0% | |
| TAGAAAGCAAGCAATTGAAG+AGG | + | chr8.2:34154333-34154352 | MS.gene008915:CDS | 35.0% | |
| TAGAGTTCCTTATATGGATG+AGG | + | chr8.2:34154120-34154139 | MS.gene008915:CDS | 35.0% | |
| TATAATGCTGCGAAATTCCA+AGG | + | chr8.2:34156485-34156504 | MS.gene008915:CDS | 35.0% | |
| TATCGAAGCTCGAAACAAAA+TGG | + | chr8.2:34156234-34156253 | MS.gene008915:CDS | 35.0% | |
| TCCAGATAGAGTTCCTTATA+TGG | + | chr8.2:34154114-34154133 | MS.gene008915:CDS | 35.0% | |
| TCCATATAAGGAACTCTATC+TGG | - | chr8.2:34154118-34154137 | None:intergenic | 35.0% | |
| TCTCTCTGATAAAGTCCAAA+AGG | + | chr8.2:34155176-34155195 | MS.gene008915:CDS | 35.0% | |
| TGAAACGGAAAAGGAAAGTT+TGG | + | chr8.2:34155011-34155030 | MS.gene008915:CDS | 35.0% | |
| TGATAAGTGATCGTACCTAT+CGG | - | chr8.2:34154053-34154072 | None:intergenic | 35.0% | |
| TGATGCTGGAAATCATGAAA+AGG | + | chr8.2:34155701-34155720 | MS.gene008915:CDS | 35.0% | |
| TGTTCTGATCTTCAACAACT+TGG | - | chr8.2:34155110-34155129 | None:intergenic | 35.0% | |
| TGTTGAAGAGAAGTTTAGGA+TGG | + | chr8.2:34156103-34156122 | MS.gene008915:CDS | 35.0% | |
| TTGGAGGGAAATGAAGAAAT+CGG | + | chr8.2:34155999-34156018 | MS.gene008915:CDS | 35.0% | |
| ! | AACTTTCCTTTTCCGTTTCA+AGG | - | chr8.2:34155011-34155030 | None:intergenic | 35.0% |
| ! | AAGAGATTTGCTCTTTCGTA+CGG | + | chr8.2:34153619-34153638 | MS.gene008915:intron | 35.0% |
| ! | AAGTCTTTTGCAGAAAAGCT+TGG | + | chr8.2:34155980-34155999 | MS.gene008915:CDS | 35.0% |
| ! | AATCCTTCTGGCATTTTTCT+TGG | - | chr8.2:34154172-34154191 | None:intergenic | 35.0% |
| ! | GTTCATTTTGAATCTCTGCA+AGG | - | chr8.2:34156328-34156347 | None:intergenic | 35.0% |
| ! | GTTGAAGAGAAGTTTAGGAT+GGG | + | chr8.2:34156104-34156123 | MS.gene008915:CDS | 35.0% |
| ! | TAGAGGAGAATCTAGAATTC+TGG | + | chr8.2:34156141-34156160 | MS.gene008915:CDS | 35.0% |
| ! | TGATGATGCAAAGTCCAATA+CGG | + | chr8.2:34155533-34155552 | MS.gene008915:CDS | 35.0% |
| ! | TGGGAACATTTTATGTGTTG+TGG | - | chr8.2:34153807-34153826 | None:intergenic | 35.0% |
| !! | AAAAATTGAGGAAGGTGTCA+TGG | + | chr8.2:34153565-34153584 | MS.gene008915:intron | 35.0% |
| !! | AAGAGCATTGCTCTTTCATA+CGG | + | chr8.2:34153538-34153557 | MS.gene008915:intron | 35.0% |
| !! | AATAATTAAGGAAGGTGCCA+CGG | + | chr8.2:34153645-34153664 | MS.gene008915:intron | 35.0% |
| !! | CCTCTAAGGTCATTTATCTT+TGG | + | chr8.2:34156689-34156708 | MS.gene008915:intron | 35.0% |
| !! | TAATGTTATTGATGACGAGG+AGG | + | chr8.2:34154519-34154538 | MS.gene008915:CDS | 35.0% |
| !! | TATTGTTGTTGCTTTCTCCT+CGG | - | chr8.2:34155775-34155794 | None:intergenic | 35.0% |
| !! | TTTTTCTGCCATTTCTGTCA+CGG | - | chr8.2:34154875-34154894 | None:intergenic | 35.0% |
| !!! | ACGTTTGGTTTTAATCCTTC+TGG | - | chr8.2:34154184-34154203 | None:intergenic | 35.0% |
| AAATGAACTCACACTATGGC+TGG | + | chr8.2:34156340-34156359 | MS.gene008915:CDS | 40.0% | |
| ACGCTGTTGTTATCTCTTCT+TGG | - | chr8.2:34156424-34156443 | None:intergenic | 40.0% | |
| ACTCCTAAAGCTCCTAAATC+AGG | + | chr8.2:34154304-34154323 | MS.gene008915:CDS | 40.0% | |
| ACTCTTTGAGTCATCATTGC+AGG | + | chr8.2:34155893-34155912 | MS.gene008915:CDS | 40.0% | |
| ATCAAGACTACAATGCGCTT+CGG | - | chr8.2:34155154-34155173 | None:intergenic | 40.0% | |
| CAATGAATCAATGGCCGTAT+TGG | - | chr8.2:34155367-34155386 | None:intergenic | 40.0% | |
| CCAAAAGAGTAAGGGAAGTA+AGG | + | chr8.2:34154644-34154663 | MS.gene008915:CDS | 40.0% | |
| CCCACAACCTATTACCATAT+TGG | + | chr8.2:34153823-34153842 | MS.gene008915:intron | 40.0% | |
| CTGCTGTTGAAGAGAAGTTT+AGG | + | chr8.2:34156099-34156118 | MS.gene008915:CDS | 40.0% | |
| GACAGAAGCAATTGTGTTGT+TGG | - | chr8.2:34154092-34154111 | None:intergenic | 40.0% | |
| GCTAGATATTGGGAAACTGA+GGG | + | chr8.2:34154433-34154452 | MS.gene008915:CDS | 40.0% | |
| TAAATGACCTTAGAGGAACG+CGG | - | chr8.2:34156685-34156704 | None:intergenic | 40.0% | |
| TCCAATTTGCAAGACGAACT+CGG | + | chr8.2:34154484-34154503 | MS.gene008915:CDS | 40.0% | |
| TCGAATCTCTTCGTCTTTCA+CGG | - | chr8.2:34155943-34155962 | None:intergenic | 40.0% | |
| TGCTAGATATTGGGAAACTG+AGG | + | chr8.2:34154432-34154451 | MS.gene008915:CDS | 40.0% | |
| TTCTTGGATTTCACACAACG+AGG | - | chr8.2:34156408-34156427 | None:intergenic | 40.0% | |
| ! | AGAGATTTGCTCTTTCGTAC+GGG | + | chr8.2:34153620-34153639 | MS.gene008915:intron | 40.0% |
| ! | CCTTACTTCCCTTACTCTTT+TGG | - | chr8.2:34154647-34154666 | None:intergenic | 40.0% |
| ! | CTTTTGCAGAAAAGCTTGGA+GGG | + | chr8.2:34155984-34156003 | MS.gene008915:CDS | 40.0% |
| ! | TCAACAGCAGAAGTTGATTC+TGG | - | chr8.2:34156089-34156108 | None:intergenic | 40.0% |
| ! | TCTGCAAGGTGCTTATAAAG+TGG | - | chr8.2:34156314-34156333 | None:intergenic | 40.0% |
| ! | TCTTTTGCAGAAAAGCTTGG+AGG | + | chr8.2:34155983-34156002 | MS.gene008915:CDS | 40.0% |
| !! | AGAGCATTGCTCTTTCATAC+GGG | + | chr8.2:34153539-34153558 | MS.gene008915:intron | 40.0% |
| !! | CAATACGGCCATTGATTCAT+TGG | + | chr8.2:34155365-34155384 | MS.gene008915:CDS | 40.0% |
| AACTGATGAACTCCATTCGC+TGG | + | chr8.2:34154978-34154997 | MS.gene008915:CDS | 45.0% | |
| AATCCAATTCGCAAAAGCCG+AGG | + | chr8.2:34154707-34154726 | MS.gene008915:CDS | 45.0% | |
| ACCGAGTTCGTCTTGCAAAT+TGG | - | chr8.2:34154488-34154507 | None:intergenic | 45.0% | |
| CATACCGATCTTTAGCCGAT+AGG | + | chr8.2:34154035-34154054 | MS.gene008915:CDS | 45.0% | |
| CCACCAAGAAAAATGCCAGA+AGG | + | chr8.2:34154166-34154185 | MS.gene008915:CDS | 45.0% | |
| GAGAAACCAGATGAGACCTT+CGG | + | chr8.2:34156649-34156668 | MS.gene008915:CDS | 45.0% | |
| GCAAACGTGACAATGCTTCT+TGG | - | chr8.2:34154582-34154601 | None:intergenic | 45.0% | |
| GTCACGTTTGCAAGAGAAAC+AGG | + | chr8.2:34154591-34154610 | MS.gene008915:CDS | 45.0% | |
| TCGCAACCTTGAAACGGAAA+AGG | + | chr8.2:34155002-34155021 | MS.gene008915:CDS | 45.0% | |
| TCGTCGTCCTCATCCATATA+AGG | - | chr8.2:34154130-34154149 | None:intergenic | 45.0% | |
| TCTTCAACTTGATGCCGAGA+AGG | + | chr8.2:34156583-34156602 | MS.gene008915:CDS | 45.0% | |
| TTGCTGATGAGCTTCAAGCT+GGG | + | chr8.2:34156543-34156562 | MS.gene008915:CDS | 45.0% | |
| TTTACATCTCGTTTCGGCCT+CGG | - | chr8.2:34154727-34154746 | None:intergenic | 45.0% | |
| ! | CCTTCTGGCATTTTTCTTGG+TGG | - | chr8.2:34154169-34154188 | None:intergenic | 45.0% |
| ! | CGTACCTATCGGCTAAAGAT+CGG | - | chr8.2:34154042-34154061 | None:intergenic | 45.0% |
| ! | GGCTTTAACCGTGACAGAAA+TGG | + | chr8.2:34154864-34154883 | MS.gene008915:CDS | 45.0% |
| ! | TTTCGAGGCTGGCTCAAATT+CGG | + | chr8.2:34154843-34154862 | MS.gene008915:CDS | 45.0% |
| ! | TTTGGAGCTTTCGGAACGTT+TGG | - | chr8.2:34154199-34154218 | None:intergenic | 45.0% |
| !! | AGTGGAGTCTTTGGAGCTTT+CGG | - | chr8.2:34154208-34154227 | None:intergenic | 45.0% |
| !! | TGATTTTCTGGTGGCTGCAA+TGG | - | chr8.2:34156035-34156054 | None:intergenic | 45.0% |
| AAAGGTGATACCAGACGAGG+AGG | + | chr8.2:34155194-34155213 | MS.gene008915:CDS | 50.0% | |
| AAAGGTGATACCGAACGAGG+AGG | + | chr8.2:34155401-34155420 | MS.gene008915:CDS | 50.0% | |
| CAACTTCGCAAGAGCCTTCT+CGG | - | chr8.2:34156600-34156619 | None:intergenic | 50.0% | |
| CCAAAAGGTGATACCAGACG+AGG | + | chr8.2:34155191-34155210 | MS.gene008915:CDS | 50.0% | |
| CCAAAAGGTGATACCGAACG+AGG | + | chr8.2:34155398-34155417 | MS.gene008915:CDS | 50.0% | |
| CGGCTAAAGATCGGTATGCA+CGG | - | chr8.2:34154033-34154052 | None:intergenic | 50.0% | |
| CTCACCTTATCCTCCTCGTT+CGG | - | chr8.2:34155414-34155433 | None:intergenic | 50.0% | |
| GATACCAGACGAGGAGGATA+TGG | + | chr8.2:34155200-34155219 | MS.gene008915:CDS | 50.0% | |
| GATACCGAACGAGGAGGATA+AGG | + | chr8.2:34155407-34155426 | MS.gene008915:CDS | 50.0% | |
| GGAAACTGAGGGACAGATCA+AGG | + | chr8.2:34154444-34154463 | MS.gene008915:CDS | 50.0% | |
| GGGAATCGACGAACTTCTAG+AGG | + | chr8.2:34156124-34156143 | MS.gene008915:CDS | 50.0% | |
| GTTGCTGATGAGCTTCAAGC+TGG | + | chr8.2:34156542-34156561 | MS.gene008915:CDS | 50.0% | |
| TCGAATCCGAAGGTCTCATC+TGG | - | chr8.2:34156658-34156677 | None:intergenic | 50.0% | |
| TGCTGCGAAATTCCAAGGAG+AGG | + | chr8.2:34156490-34156509 | MS.gene008915:CDS | 50.0% | |
| ! | CCTCGTCTGGTATCACCTTT+TGG | - | chr8.2:34155194-34155213 | None:intergenic | 50.0% |
| ! | CCTCGTTCGGTATCACCTTT+TGG | - | chr8.2:34155401-34155420 | None:intergenic | 50.0% |
| ! | TTGCAAGACGAACTCGGTGA+AGG | + | chr8.2:34154490-34154509 | MS.gene008915:CDS | 50.0% |
| !! | GCTGGTTCGCAACCTTGAAA+CGG | + | chr8.2:34154996-34155015 | MS.gene008915:CDS | 50.0% |
| !! | GGCATTTTTCTTGGTGGCCT+TGG | - | chr8.2:34154163-34154182 | None:intergenic | 50.0% |
| !! | TTTTCTGGTGGCTGCAATGG+AGG | - | chr8.2:34156032-34156051 | None:intergenic | 50.0% |
| ACGCGGTTCTTCGAATCCGA+AGG | - | chr8.2:34156668-34156687 | None:intergenic | 55.0% | |
| CAAGGTTGCGAACCAGCGAA+TGG | - | chr8.2:34154993-34155012 | None:intergenic | 55.0% | |
| CGAAGAACCGCGTTCCTCTA+AGG | + | chr8.2:34156675-34156694 | MS.gene008915:CDS | 55.0% | |
| CTCACCATATCCTCCTCGTC+TGG | - | chr8.2:34155207-34155226 | None:intergenic | 55.0% | |
| GAGCCGCTTCTGCCATCAAA+CGG | - | chr8.2:34154549-34154568 | None:intergenic | 55.0% | |
| GGAAAACAGCGCGTTGCTGA+AGG | + | chr8.2:34156361-34156380 | MS.gene008915:CDS | 55.0% | |
| TAACGACAGCGACAGCCACA+AGG | + | chr8.2:34154248-34154267 | MS.gene008915:CDS | 55.0% | |
| ! | TCGCCGTTTGATGGCAGAAG+CGG | + | chr8.2:34154543-34154562 | MS.gene008915:CDS | 55.0% |
| ! | CGGCCTCGGCTTTTGCGAAT+TGG | - | chr8.2:34154713-34154732 | None:intergenic | 60.0% |
| !! | ACGACGACGAAGCATCGCCA+AGG | + | chr8.2:34154143-34154162 | MS.gene008915:CDS | 60.0% |
| CGAGGAGGCTCGCCGTTTGA+TGG | + | chr8.2:34154534-34154553 | MS.gene008915:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.2 | gene | 34153389 | 34156872 | 34153389 | ID=MS.gene008915 |
| chr8.2 | mRNA | 34153389 | 34156872 | 34153389 | ID=MS.gene008915.t1;Parent=MS.gene008915 |
| chr8.2 | exon | 34153389 | 34153407 | 34153389 | ID=MS.gene008915.t1.exon1;Parent=MS.gene008915.t1 |
| chr8.2 | CDS | 34153389 | 34153407 | 34153389 | ID=cds.MS.gene008915.t1;Parent=MS.gene008915.t1 |
| chr8.2 | exon | 34153906 | 34156696 | 34153906 | ID=MS.gene008915.t1.exon2;Parent=MS.gene008915.t1 |
| chr8.2 | CDS | 34153906 | 34156696 | 34153906 | ID=cds.MS.gene008915.t1;Parent=MS.gene008915.t1 |
| chr8.2 | exon | 34156869 | 34156872 | 34156869 | ID=MS.gene008915.t1.exon3;Parent=MS.gene008915.t1 |
| chr8.2 | CDS | 34156869 | 34156872 | 34156869 | ID=cds.MS.gene008915.t1;Parent=MS.gene008915.t1 |
| Gene Sequence |
| Protein sequence |
